import torch import torch.nn.functional as F import numpy as np import os, argparse import cv2 import tqdm from utils.dataset import MedDataset from lib.Network import Network parser = argparse.ArgumentParser() parser.add_argument('--test_file', type=str, default='/data/liulian/Med_Seg/dataset/dice_choose/hard', help='test list') parser.add_argument('--testsize', type=int, default=256, help='testing size') parser.add_argument('--checkpoint_path', type=str, default='/data/liulian/Med_Seg/train_output/unet_tem/20230217-221311_qulvent_24cat/weight/Net_epoch68_bestdice0.8961.pth') parser.add_argument('--pred_save_dir', type=str, default='/data/liulian/Med_Seg/save_preds/unet_tem/20230217-221311_qulvent_24cat/hard/image_pred') opt = parser.parse_args() os.makedirs(opt.pred_save_dir, exist_ok=True) model = Network() model.load_state_dict(torch.load(opt.pth_path)) model.cuda() model.eval() test_loader = MedDataset(trainsize = opt.testsize, file=opt.test_file, mode='test') for i, (image, shape, name) in enumerate(tqdm.tqdm(test_loader)): H, W = shape s = max(H, W) h_pad_0 = (s - H) // 2 w_pad_0 = (s - W) // 2 h_pad_1 = s - H - h_pad_0 w_pad_1 = s - W - w_pad_0 image = image.cuda() image = torch.unsqueeze(image, 0).float() res = model(image) res = F.interpolate(res, (s, s), mode='bilinear', align_corners=True) res = res[0, 0][h_pad_0:(s-h_pad_1), w_pad_0:(s-w_pad_1)] res = res.sigmoid().data.cpu().numpy() # # normalize res = (res - res.min()) / (res.max() - res.min() + 1e-8) res = (res >= 0.5) cv2.imwrite(os.path.join(opt.pred_save_dir, name), res * 255)