"""Diffusion model for segmentation.""" from __future__ import annotations from dataclasses import dataclass import jax.numpy as jnp import jax.random from imgx import EPS from imgx.diffusion.gaussian.gaussian_diffusion import ( GaussianDiffusion, get_gaussian_diffusion_attributes, ) from imgx.diffusion.gaussian.sampler import DDIMSampler, DDPMSampler from imgx.task.diffusion_segmentation.diffusion import DiffusionSegmentation @dataclass class GaussianDiffusionSegmentation(GaussianDiffusion, DiffusionSegmentation): # pylint: disable=abstract-method """Class for segmentation diffusion sampling. x is probabilities scaled in [-1, 1]. model_out is logits. """ classes_are_exclusive: bool @classmethod def create( # type: ignore[no-untyped-def] cls: type[GaussianDiffusionSegmentation], num_timesteps: int, # T num_timesteps_beta: int, beta_schedule: str, beta_start: float, beta_end: float, model_out_type: str, model_var_type: str, **kwargs, ) -> GaussianDiffusionSegmentation: """Create a new instance. Args: num_timesteps: number of diffusion steps. num_timesteps_beta: number of steps when defining beta schedule. beta_schedule: schedule for betas. beta_start: beta for t=0. beta_end: beta for t=T. model_out_type: type of model output. model_var_type: type of variance for p(x_{t-1} | x_t). kwargs: arguments, including classes_are_exclusive. Returns: Instance of GaussianDiffusionSegmentation. """ # sanity check for string variables if model_out_type not in ["x_start", "noise"]: raise ValueError( f"Unknown DiffusionModelOutputType {model_out_type}, should be x_start or noise." ) if model_var_type not in [ "fixed_small", "fixed_large", "learned", "learned_range", ]: raise ValueError( f"Unknown DiffusionModelVarianceType {model_var_type}," f"should be fixed_small, fixed_large, learned or learned_range." ) # set variance schedule attr_dict = get_gaussian_diffusion_attributes( num_timesteps=num_timesteps, num_timesteps_beta=num_timesteps_beta, beta_schedule=beta_schedule, beta_start=beta_start, beta_end=beta_end, ) return cls( num_timesteps=num_timesteps, noise_fn=jax.random.normal, num_timesteps_beta=num_timesteps_beta, beta_schedule=beta_schedule, beta_start=beta_start, beta_end=beta_end, model_out_type=model_out_type, model_var_type=model_var_type, **attr_dict, **kwargs, ) def model_out_to_x(self, model_out: jnp.ndarray) -> jnp.ndarray: """Convert model outputs to x space. Args: model_out: unnormalised values, classes are assumed to be in the last axis. shape = (..., num_classes). Returns: Probabilities scaled to [-1, 1]. """ fn = jax.nn.softmax if self.classes_are_exclusive else jax.nn.sigmoid x = fn(model_out) x = x * 2.0 - 1.0 return x def mask_to_x(self, mask: jnp.ndarray) -> jnp.ndarray: """Convert mask to x. Args: mask: boolean segmentation mask, shape = (batch, ..., num_classes). Returns: x, shape = (batch, ..., num_classes), of values in [-1, 1]. """ return mask * 2 - 1 def x_to_mask(self, x: jnp.ndarray) -> jnp.ndarray: """Convert x to mask. Args: x: shape = (batch, ..., num_classes), of values in [-1, 1]. Returns: boolean segmentation mask, shape = (batch, ..., num_classes). """ x = jnp.clip(x, -1.0, 1.0) return (x + 1) / 2 def x_to_logits(self, x: jnp.ndarray) -> jnp.ndarray: """Convert x into model output space, which is logits. Args: x: probabilities scaled to [-1, 1]. Returns: unnormalised logits. """ probs = (x + 1) / 2 probs = jnp.clip(probs, EPS, 1.0) return jnp.log(probs) def model_out_to_logits_start( self, model_out: jnp.ndarray, x_t: jnp.ndarray, t_index: jnp.ndarray ) -> jnp.ndarray: """Convert model outputs to logits at time 0, noiseless. Args: model_out: unnormalised values, classes are assumed to be in the last axis. shape = (..., num_classes). x_t: label at time t of shape (..., num_classes). t_index: time of shape (...,). Returns: logits, shape = (..., num_classes). """ if self.model_out_type == "x_start": # model output is logits return model_out if self.model_out_type == "noise": x_start = self.predict_xstart_from_noise_xt(x_t=x_t, noise=model_out, t_index=t_index) return self.x_to_logits(x_start) raise ValueError(f"Unknown DiffusionModelOutputType {self.model_out_type}.") @dataclass class DDPMSegmentationSampler(GaussianDiffusionSegmentation, DDPMSampler): """DDPM for segmentation.""" @dataclass class DDIMSegmentationSampler(GaussianDiffusionSegmentation, DDIMSampler): """DDIM for segmentation."""