##+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ ## Created by: Hang Zhang ## ECE Department, Rutgers University ## Email: zhang.hang@rutgers.edu ## Copyright (c) 2017 ## ## This source code is licensed under the MIT-style license found in the ## LICENSE file in the root directory of this source tree ##+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ """Synchronized Cross-GPU Batch Normalization Module""" import collections import os import threading import torch from lib.extensions.syncbn.allreduce import allreduce from torch.autograd import Function from torch.nn.functional import batch_norm from torch.nn.modules.batchnorm import _BatchNorm from torch.nn.parallel._functions import ReduceAddCoalesced, Broadcast from torch.utils.cpp_extension import load from lib.extensions.syncbn.comm import SyncMaster torch_ver = torch.__version__[:3] print('compiling/loading syncbn') build_path = '/tmp/bulid/syncbn' if not os.path.exists(build_path): os.makedirs(build_path) syncbn = load(name='syncbn', sources=['lib/extensions/syncbn/src/operator.cpp', 'lib/extensions/syncbn/src/syncbn_kernel.cu'], build_directory=build_path, verbose=True) def sum_square(input): r"""Calculate sum of elements and sum of squares for Batch Normalization""" return _sum_square.apply(input) class _sum_square(Function): @staticmethod def forward(ctx, input): ctx.save_for_backward(input) if input.is_cuda: xsum, xsqusum = syncbn.sumsquare_forward(input) else: raise NotImplemented return xsum, xsqusum @staticmethod def backward(ctx, gradSum, gradSquare): input, = ctx.saved_variables if input.is_cuda: gradInput = syncbn.sumsquare_backward(input, gradSum, gradSquare) else: raise NotImplemented return gradInput class _batchnormtrain(Function): @staticmethod def forward(ctx, input, mean, std, gamma, beta): ctx.save_for_backward(input, mean, std, gamma, beta) if input.is_cuda: output = syncbn.batchnorm_forward(input, mean, std, gamma, beta) else: raise NotImplemented return output @staticmethod def backward(ctx, gradOutput): input, mean, std, gamma, beta = ctx.saved_variables if gradOutput.is_cuda: gradInput, gradMean, gradStd, gradGamma, gradBeta = \ syncbn.batchnorm_backward(gradOutput, input, mean, std, gamma, beta, True) else: raise NotImplemented return gradInput, gradMean, gradStd, gradGamma, gradBeta def batchnormtrain(input, mean, std, gamma, beta): r"""Applies Batch Normalization over a 3d input that is seen as a mini-batch. .. _encoding.batchnormtrain: .. math:: y = \frac{x - \mu[x]}{ \sqrt{var[x] + \epsilon}} * \gamma + \beta Shape: - Input: :math:`(N, C)` or :math:`(N, C, L)` - Output: :math:`(N, C)` or :math:`(N, C, L)` (same shape as input) """ return _batchnormtrain.apply(input, mean, std, gamma, beta) class _SyncBatchNorm(_BatchNorm): def __init__(self, num_features, eps=1e-5, momentum=0.1, affine=True): super(_SyncBatchNorm, self).__init__(num_features, eps=eps, momentum=momentum, affine=affine) self._sync_master = SyncMaster(self._data_parallel_master) self._parallel_id = None self._slave_pipe = None def forward(self, input): if not self.training: return batch_norm( input, self.running_mean, self.running_var, self.weight, self.bias, self.training, self.momentum, self.eps) # Resize the input to (B, C, -1). input_shape = input.size() input = input.view(input_shape[0], self.num_features, -1) # sum(x) and sum(x^2) N = input.size(0) * input.size(2) xsum, xsqsum = sum_square(input) # all-reduce for global sum(x) and sum(x^2) if self._parallel_id == 0: mean, inv_std = self._sync_master.run_master(_ChildMessage(xsum, xsqsum, N)) else: mean, inv_std = self._slave_pipe.run_slave(_ChildMessage(xsum, xsqsum, N)) # forward return batchnormtrain(input, mean, 1.0/inv_std, self.weight, self.bias).view(input_shape) def __data_parallel_replicate__(self, ctx, copy_id): self._parallel_id = copy_id # parallel_id == 0 means master device. if self._parallel_id == 0: ctx.sync_master = self._sync_master else: self._slave_pipe = ctx.sync_master.register_slave(copy_id) def _data_parallel_master(self, intermediates): """Reduce the sum and square-sum, compute the statistics, and broadcast it.""" # Always using same "device order" makes the ReduceAdd operation faster. # Thanks to:: Tete Xiao (http://tetexiao.com/) intermediates = sorted(intermediates, key=lambda i: i[1].sum.get_device()) to_reduce = [i[1][:2] for i in intermediates] to_reduce = [j for i in to_reduce for j in i] # flatten target_gpus = [i[1].sum.get_device() for i in intermediates] sum_size = sum([i[1].sum_size for i in intermediates]) sum_, ssum = ReduceAddCoalesced.apply(target_gpus[0], 2, *to_reduce) mean, inv_std = self._compute_mean_std(sum_, ssum, sum_size) broadcasted = Broadcast.apply(target_gpus, mean, inv_std) outputs = [] for i, rec in enumerate(intermediates): outputs.append((rec[0], _MasterMessage(*broadcasted[i*2:i*2+2]))) return outputs def _compute_mean_std(self, sum_, ssum, size): """Compute the mean and standard-deviation with sum and square-sum. This method also maintains the moving average on the master device.""" assert size > 1, 'BatchNorm computes unbiased standard-deviation, which requires size > 1.' mean = sum_ / size sumvar = ssum - sum_ * mean unbias_var = sumvar / (size - 1) bias_var = sumvar / size self.running_mean = (1 - self.momentum) * self.running_mean + self.momentum * mean.data self.running_var = (1 - self.momentum) * self.running_var + self.momentum * unbias_var.data return mean, (bias_var + self.eps) ** -0.5 # API adapted from https://github.com/vacancy/Synchronized-BatchNorm-PyTorch _ChildMessage = collections.namedtuple('Message', ['sum', 'ssum', 'sum_size']) _MasterMessage = collections.namedtuple('_MasterMessage', ['sum', 'inv_std']) class BatchNorm1d(_SyncBatchNorm): r"""Please see the docs in :class:`encoding.nn.BatchNorm2d`""" def _check_input_dim(self, input): if input.dim() != 2 and input.dim() != 3: raise ValueError('expected 2D or 3D input (got {}D input)' .format(input.dim())) super(BatchNorm1d, self)._check_input_dim(input) class BatchNorm2d(_SyncBatchNorm): r"""Cross-GPU Synchronized Batch normalization (SyncBN) Standard BN [1]_ implementation only normalize the data within each device (GPU). SyncBN normalizes the input within the whole mini-batch. We follow the sync-onece implmentation described in the paper [2]_ . Please see the design idea in the `notes <./notes/syncbn.html>`_. .. note:: We adapt the awesome python API from another `PyTorch SyncBN Implementation `_ and provide efficient CUDA backend. .. math:: y = \frac{x - mean[x]}{ \sqrt{Var[x] + \epsilon}} * gamma + beta The mean and standard-deviation are calculated per-channel over the mini-batches and gamma and beta are learnable parameter vectors of size C (where C is the input size). During training, this layer keeps a running estimate of its computed mean and variance. The running sum is kept with a default momentum of 0.1. During evaluation, this running mean/variance is used for normalization. Because the BatchNorm is done over the `C` dimension, computing statistics on `(N, H, W)` slices, it's common terminology to call this Spatial BatchNorm Args: num_features: num_features from an expected input of size batch_size x num_features x height x width eps: a value added to the denominator for numerical stability. Default: 1e-5 momentum: the value used for the running_mean and running_var computation. Default: 0.1 affine: a boolean value that when set to ``True``, gives the layer learnable affine parameters. Default: ``True`` Shape: - Input: :math:`(N, C, H, W)` - Output: :math:`(N, C, H, W)` (same shape as input) Reference: .. [1] Ioffe, Sergey, and Christian Szegedy. "Batch normalization: Accelerating deep network training by reducing internal covariate shift." *ICML 2015* .. [2] Hang Zhang, Kristin Dana, Jianping Shi, Zhongyue Zhang, Xiaogang Wang, Ambrish Tyagi, and Amit Agrawal. "Context Encoding for Semantic Segmentation." *CVPR 2018* Examples: >>> m = BatchNorm2d(100) >>> net = torch.nn.DataParallel(m) >>> syncbn.parallel.patch_replication_callback(net) >>> output = net(input) """ def _check_input_dim(self, input): if input.dim() != 4: raise ValueError('expected 4D input (got {}D input)' .format(input.dim())) super(BatchNorm2d, self)._check_input_dim(input) class BatchNorm3d(_SyncBatchNorm): r"""Please see the docs in :class:`encoding.nn.BatchNorm2d`""" def _check_input_dim(self, input): if input.dim() != 5: raise ValueError('expected 5D input (got {}D input)' .format(input.dim())) super(BatchNorm3d, self)._check_input_dim(input) class SharedTensor(object): """Shared Tensor for cross GPU all reduce operation""" def __init__(self, nGPUs): self.mutex = threading.Lock() self.all_tasks_done = threading.Condition(self.mutex) self.nGPUs = nGPUs self._clear() def _clear(self): self.N = 0 self.dict = {} self.push_tasks = self.nGPUs self.reduce_tasks = self.nGPUs def push(self, *inputs): # push from device with self.mutex: if self.push_tasks == 0: self._clear() self.N += inputs[0] igpu = inputs[1] self.dict[igpu] = inputs[2:] #idx = self.nGPUs - self.push_tasks self.push_tasks -= 1 with self.all_tasks_done: if self.push_tasks == 0: self.all_tasks_done.notify_all() while self.push_tasks: self.all_tasks_done.wait() def pull(self, igpu): # pull from device with self.mutex: if igpu == 0: assert(len(self.dict) == self.nGPUs) # flatten the tensors self.list = [t for i in range(len(self.dict)) for t in self.dict[i]] self.outlist = allreduce(2, *self.list) self.reduce_tasks -= 1 else: self.reduce_tasks -= 1 with self.all_tasks_done: if self.reduce_tasks == 0: self.all_tasks_done.notify_all() while self.reduce_tasks: self.all_tasks_done.wait() # all reduce done return self.N, self.outlist[2*igpu], self.outlist[2*igpu+1] def __len__(self): return self.nGPUs def __repr__(self): return ('SharedTensor')