import warnings from types import MethodType import torch from ase.units import GPa from mattersim.datasets.utils.build import build_dataloader from mattersim.forcefield.potential import Potential warnings.filterwarnings("ignore") # https://github.com/microsoft/mattersim/tree/81e6b01c09945f1c707eb2c29921932a12f920d1/pretrained_models def load_pretrained_mattersim(device="cpu"): mattersim_model = Potential.from_checkpoint( load_path="mattersim-v1.0.0-1m", device=device ) mattersim_model.original_forward = mattersim_model.forward def forward(self, atoms): dataloader = build_dataloader([atoms], only_inference=True) mattersim_model.forward = mattersim_model.original_forward predictions = mattersim_model.mattersim_forward( dataloader, include_forces=True, include_stresses=True ) mattersim_model.forward = MethodType(forward, mattersim_model) s = predictions[2][0] * GPa # eV/A^3 stress = torch.tensor([s[0, 0], s[1, 1], s[2, 2], s[1, 2], s[0, 2], s[0, 1]], device=device) results = { "energy": torch.tensor(predictions[0][0], device=device), "forces": torch.tensor(predictions[1][0], device=device), "stress": stress, } return results mattersim_model.mattersim_forward = mattersim_model.predict_properties mattersim_model.forward = MethodType(forward, mattersim_model) return mattersim_model """ from ase.io import read atoms = read("/store/nosnap/mlip-eval/uip-data/amcsd_processed_final/all/Abellaite/0_Abellaite_298.00_1.01_.cif") structures = [atoms] device = "cpu" potential = Potential.from_checkpoint(device=device) dataloader = build_dataloader(structures, only_inference=True) for _ in range(5): predictions = potential.predict_properties(dataloader, include_forces=True, include_stresses=True) """ # # set up the structure # si = bulk("Si", "diamond", a=5.43) # # replicate the structures to form a list # structures = [si] * 10 # # load the model # device = "cuda" if torch.cuda.is_available() else "cpu" # print(f"Running MatterSim on {device}") # potential = Potential.from_checkpoint(device=device) # # build the dataloader that is compatible with MatterSim # dataloader = build_dataloader(structures, only_inference=True) # # make predictions # predictions = potential.predict_properties(dataloader, include_forces=True, include_stresses=True) # # print the predictions # print(f"Total energy in eV: {predictions[0]}") # print(f"Forces in eV/Angstrom: {predictions[1]}") # print(f"Stresses in GPa: {predictions[2]}") # print(f"Stresses in eV/A^3: {np.array(predictions[2])*GPa}")