import pickle import re from argparse import ArgumentParser from dataclasses import dataclass from paperswithcode import PapersWithCodeClient from paperswithcode.models import DatasetCreateRequest def dataset_name(dataset): return f"{dataset.code} MOABB" def dataset_full_name(dataset): s = dataset.__doc__.split("\n\n")[0] s = re.sub(r" \[\d+\]_", "", s) s = re.sub(r"\s+", " ", s) return s def dataset_url(dataset): return f"http://moabb.neurotechx.com/docs/generated/moabb.datasets.{dataset.__class__.__name__}.html" def valid_datasets(): from moabb.datasets.utils import dataset_list from moabb.utils import aliases_list deprecated_names = [n[0] for n in aliases_list] return [ d() for d in dataset_list if (d.__name__ not in deprecated_names) and ("Fake" not in d.__name__) ] _paradigms = { "MotorImagery": ( "Motor Imagery", ["all classes", "left hand vs. right hand", "right hand vs. feet"], "Motor Imagery", ), "P300": ("ERP", None, "Event-Related Potential (ERP)"), "SSVEP": ("SSVEP", None, "Steady-State Visually Evoked Potential (SSVEP)"), "CVEP": ("c-VEP", None, "Code-Modulated Visual Evoked Potential (c-VEP)"), } _evaluations = { "WithinSession": "Within-Session", "CrossSession": "Cross-Session", "CrossSubject": "Cross-Subject", } @dataclass class Task: id: str name: str description: str area: str parent_task: str @classmethod def make(cls, name, description, area, parent_task): # to snake case task_id = ( name.lower().replace(" ", "-").replace("(", "").replace(")", "").split(".")[0] ) return cls(task_id, name, description, area, parent_task) def create_tasks(client: PapersWithCodeClient): tasks = {} for paradigm_class, ( paradigm_name, subparadigms, paradigm_fullname, ) in _paradigms.items(): description = f"Classification of examples recorded under the {paradigm_fullname} paradigm, as part of Brain-Computer Interfaces (BCI)." d = { "name": paradigm_name, "description": description, "area": "Medical", "parent_task": "Brain Computer Interface", } # task = client.task_add(TaskCreateRequest(**d)) task = Task.make(**d) tasks[paradigm_class] = task for evaluation_class, evaluation in _evaluations.items(): eval_url = f"http://moabb.neurotechx.com/docs/generated/moabb.evaluations.{evaluation.replace('-', '')}Evaluation.html" d = { "name": f"{evaluation} {paradigm_name}", "description": f"""MOABB's {evaluation} evaluation for the {paradigm_name} paradigm. Evaluation details: [{eval_url}]({eval_url})""", "area": "medical", "parent_task": task.id, } # subtask = client.task_add(TaskCreateRequest(**d)) subtask = Task.make(**d) tasks[(paradigm_class, evaluation_class)] = subtask if subparadigms is not None: for subparadigm in subparadigms: d = { "name": f"{evaluation} {paradigm_name} ({subparadigm})", "description": f"""MOABB's {evaluation} evaluation for the {paradigm_name} paradigm ({subparadigm}). Evaluation details: [{eval_url}]({eval_url})""", "area": "medical", "parent_task": subtask.id, } # subsubtask = client.task_add(TaskCreateRequest(**d)) subsubtask = Task.make(**d) tasks[(paradigm_class, evaluation_class, subparadigm)] = subsubtask return tasks def create_datasets(client): datasets = valid_datasets() pwc_datasets = {} for dataset in datasets: pwc_dataset = client.dataset_add( DatasetCreateRequest( name=dataset_name(dataset), full_name=dataset_full_name(dataset), url=dataset_url(dataset), ) ) pwc_datasets[dataset.code] = pwc_dataset return pwc_datasets if __name__ == "__main__": parser = ArgumentParser() parser.add_argument("token", type=str, help="PapersWithCode API token") parser.add_argument( "-o", "--output", type=str, help="Pickle output file", default="paperswithcode_datasets_and_tasks.pickle", ) args = parser.parse_args() client = PapersWithCodeClient(token=args.token) # create tasks tasks = create_tasks(client) # create datasets datasets = create_datasets(client) obj = {"datasets": datasets, "tasks": tasks} with open(args.output, "wb") as f: pickle.dump(obj, f) print(f"Datasets and tasks saved to {args.output}")