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71174bc | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 | /* eslint-disable @typescript-eslint/no-empty-interface */
/* eslint-disable @typescript-eslint/ban-types */
export interface IAtom {
chain: string;
resi: number;
resn: string;
serial?: number;
atom?: string; // atom name
altLoc?: string;
pdbline?: string;
x?: number;
y?: number;
z?: number;
b?: number;
elem?: string;
bonds?: number[];
index?: number;
bondOrder: number[];
hetflag?: boolean;
}
export enum TreeNodeType {
Protein = "protein",
Nucleic = "nucleic",
Compound = "compound",
Metal = "metal",
Lipid = "lipid",
Ions = "ions",
Solvent = "solvent",
Region = "region",
Other = "other" // For things like fpocket volume atoms
}
export enum SelectedType {
False = "false",
True = "true",
ChildOfTrue = "child_of_true",
}
export enum RegionType {
Sphere = "Sphere",
Box = "Box",
Arrow = "Arrow",
Cylinder = "Cylinder",
}
// export class Region {
// // All regions can have these properties
// type: RegionType;
// center: [number, number, number];
// opacity?: number;
// color?: string;
// movable?: boolean; // Whether you can move or resize
// // Spheres and arrows have radius
// radius?: number;
// // x/y/z size for box
// dimensions?: [number, number, number];
// // arrow only (uses radius too). Also cylinder.
// endPt?: [number, number, number]; // center is start pt
// radiusRatio?: number; // Radius of arrow head is radiusRatio * radius
// // Cylinder only
// dashed?: boolean;
// constructor(params: IRegion | ISphere | IBox | IArrow | ICylinder) {
// this.type = params.type;
// this.center = params.center;
// this.opacity = params.opacity;
// this.color = params.color;
// this.movable = params.movable;
// this.radius = (params as ISphere).radius;
// this.dimensions = (params as IBox).dimensions;
// this.endPt = (params as IArrow).endPt;
// this.radiusRatio = (params as IArrow).radiusRatio;
// this.dashed = (params as ICylinder).dashed;
// }
// }
export interface IRegion {
type: RegionType;
center: [number, number, number];
opacity?: number;
color?: string;
movable?: boolean; // Whether you can move or resize
}
export interface ISphere extends IRegion {
radius: number;
}
export interface IBox extends IRegion {
// x/y/z size for box
dimensions: [number, number, number];
}
export interface IArrow extends IRegion {
endPt: [number, number, number]; // center is start pt
radius?: number;
radiusRatio?: number; // Radius of arrow head is radiusRatio * radius
}
export interface ICylinder extends IRegion {
endPt: [number, number, number]; // center is start pt
radius?: number;
dashed?: boolean;
}
export enum TreeNodeDataType {
Table,
Graph,
}
export enum TableHeaderSort {
All, // default
AllButFirst,
None
}
export interface ITreeNodeData {
// Varies depending on type. TODO: Make more specific using ||
data: any; // Should be like {}, I think.
type: TreeNodeDataType;
// The TreeNode that this data is associated with. It's the id to avoid
// circular references when serializing.
treeNodeId?: string;
headerSort?: TableHeaderSort;
}
// export interface IResidue extends TreeNode {}
// Below is used by the FormSelectRegion component in its emits.
export interface ISphereOrBox {
center: [number, number, number];
radius?: number;
dimensions?: [number, number, number];
} |