molmoda / data /src /Plugins /Core /EditCompoundPlugin.vue
introvoyz041's picture
Migrated from GitHub
71174bc verified
<template>
<PluginComponent v-model="open" :infoPayload="infoPayload" @onUserArgChanged="onUserArgChanged"
@onMolCountsChanged="onMolCountsChanged"></PluginComponent>
</template>
<script lang="ts">
import { Options } from "vue-class-component";
import PluginComponent from "@/Plugins/Parents/PluginComponent/PluginComponent.vue";
import { PluginParentClass } from "@/Plugins/Parents/PluginParentClass/PluginParentClass";
import { UserArg } from "@/UI/Forms/FormFull/FormFullInterfaces";
import { ITest } from "@/Testing/TestInterfaces";
import { TestCmdList } from "@/Testing/TestCmdList";
import { IContributorCredit, ISoftwareCredit } from "../PluginInterfaces";
import { pluginsApi } from "@/Api/Plugins";
import { getMoleculesFromStore } from "@/Store/StoreExternalAccess";
import { TreeNodeType } from "@/UI/Navigation/TreeView/TreeInterfaces";
import { TreeNode } from "@/TreeNodes/TreeNode/TreeNode";
import { Tag } from "./ActivityFocus/ActivityFocusUtils";
/**
* EditCompoundPlugin
*/
@Options({
components: {
PluginComponent,
},
})
export default class EditCompoundPlugin extends PluginParentClass {
// @Prop({ required: true }) softwareCreditsToShow!: ISoftwareCredit[];
// @Prop({ required: true }) contributorCreditsToShow!: IContributorCredit[];
menuPath = ["Compounds", "[2] Build", "[5] Edit..."];
title = "Edit Compound";
softwareCredits: ISoftwareCredit[] = [];
contributorCredits: IContributorCredit[] = [];
pluginId = "editcompound";
noPopup = true;
userArgDefaults: UserArg[] = [];
logJob = false;
// hotkey = "z";
intro = "Edit a compound.";
details = "This plugin opens the selected compound in a molecular editor for modification.";
tags = [Tag.All];
selected: TreeNode | undefined = undefined;
/**
* Check if this plugin can currently be used.
*
* @returns {string | null} If it returns a string, show that as an error
* message. If null, proceed to run the plugin.
*/
checkPluginAllowed(): string | null {
const selecteds =
getMoleculesFromStore().terminals.filters.keepSelected();
if (selecteds.length !== 1) {
return "First select one (and only one) compound by clicking on its name in the Navigator panel.";
}
// Get the one selected molecule
this.selected = selecteds.get(0);
if (this.selected.type !== TreeNodeType.Compound) {
return "First select a compound by clicking on its name in the Navigator panel.";
}
return null;
}
/**
* Every plugin runs some job. This is the function that does the job running.
*
* @returns {Promise<void>} Resolves when the job is done.
*/
async runJobInBrowser(): Promise<void> {
if (this.selected === undefined) {
return Promise.resolve();
}
const name = this.selected.title;
const smilesFileInfo = await this.selected.toFileInfo(".can");
let smiles = smilesFileInfo.contents;
// Keep only the part before any whitespace (use regex)
smiles = smiles.split(/\s.*/)[0];
pluginsApi.runPlugin("drawmoleculeplugin", {
smiles: smiles,
name: name + ":edited",
});
return Promise.resolve();
}
/**
* Gets the test commands for the plugin. For advanced use.
*
* @gooddefault
* @document
* @returns {ITest[]} The selenium test commands.
*/
async getTests(): Promise<ITest[]> {
return [
{
beforePluginOpens: () => new TestCmdList()
.loadExampleMolecule(true)
.selectMoleculeInTree("Compounds")
.waitUntilRegex("#navigator", "TOU"),
// Wait for plugin to open (slower on beta, play it safe with 15 seconds)
pluginOpen: () => new TestCmdList().wait(15).text("#draw-smiles", "OOOO"),
closePlugin: () => new TestCmdList().click("#modal-drawmoleculeplugin .action-btn"),
afterPluginCloses: () => new TestCmdList()
.waitUntilRegex("#navigator", "TOU:101:edited")
}
];
}
}
</script>
<style scoped lang="scss"></style>