# coding: utf-8 """ VCell API VCell API The version of the OpenAPI document: 1.0.1 Contact: vcell_support@uchc.com Generated by OpenAPI Generator (https://openapi-generator.tech) Do not edit the class manually. """ # noqa: E501 import io import warnings from pydantic import validate_call, Field, StrictFloat, StrictStr, StrictInt from typing import Dict, List, Optional, Tuple, Union, Any try: from typing import Annotated except ImportError: from typing_extensions import Annotated from pydantic import Field from typing_extensions import Annotated from pydantic import StrictBool, StrictStr from typing import List, Optional from vcell_client.models.bio_model import BioModel from vcell_client.models.bio_model_summary import BioModelSummary from vcell_client.api_client import ApiClient from vcell_client.api_response import ApiResponse from vcell_client.rest import RESTResponseType class BioModelResourceApi: """NOTE: This class is auto generated by OpenAPI Generator Ref: https://openapi-generator.tech Do not edit the class manually. """ def __init__(self, api_client=None) -> None: if api_client is None: api_client = ApiClient.get_default() self.api_client = api_client @validate_call def delete_bio_model( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> None: """Delete the BioModel from VCell's database. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._delete_bio_model_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ).data @validate_call def delete_bio_model_with_http_info( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> ApiResponse[None]: """Delete the BioModel from VCell's database. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._delete_bio_model_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ) @validate_call def delete_bio_model_without_preload_content( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> RESTResponseType: """Delete the BioModel from VCell's database. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._delete_bio_model_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) return response_data.response def _delete_bio_model_serialize( self, bio_model_id, _request_auth, _content_type, _headers, _host_index, ) -> Tuple: _host = None _collection_formats: Dict[str, str] = { } _path_params: Dict[str, str] = {} _query_params: List[Tuple[str, str]] = [] _header_params: Dict[str, Optional[str]] = _headers or {} _form_params: List[Tuple[str, str]] = [] _files: Dict[str, str] = {} _body_params: Optional[bytes] = None # process the path parameters if bio_model_id is not None: _path_params['bioModelID'] = bio_model_id # process the query parameters # process the header parameters # process the form parameters # process the body parameter # set the HTTP header `Accept` _header_params['Accept'] = self.api_client.select_header_accept( [ 'application/json' ] ) # authentication setting _auth_settings: List[str] = [ ] return self.api_client.param_serialize( method='DELETE', resource_path='/api/v1/bioModel/{bioModelID}', path_params=_path_params, query_params=_query_params, header_params=_header_params, body=_body_params, post_params=_form_params, files=_files, auth_settings=_auth_settings, collection_formats=_collection_formats, _host=_host, _request_auth=_request_auth ) @validate_call def get_bio_model( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> BioModel: """Get BioModel. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "BioModel", '403': "VCellHTTPError", '404': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ).data @validate_call def get_bio_model_with_http_info( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> ApiResponse[BioModel]: """Get BioModel. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "BioModel", '403': "VCellHTTPError", '404': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ) @validate_call def get_bio_model_without_preload_content( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> RESTResponseType: """Get BioModel. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "BioModel", '403': "VCellHTTPError", '404': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) return response_data.response def _get_bio_model_serialize( self, bio_model_id, _request_auth, _content_type, _headers, _host_index, ) -> Tuple: _host = None _collection_formats: Dict[str, str] = { } _path_params: Dict[str, str] = {} _query_params: List[Tuple[str, str]] = [] _header_params: Dict[str, Optional[str]] = _headers or {} _form_params: List[Tuple[str, str]] = [] _files: Dict[str, str] = {} _body_params: Optional[bytes] = None # process the path parameters if bio_model_id is not None: _path_params['bioModelID'] = bio_model_id # process the query parameters # process the header parameters # process the form parameters # process the body parameter # set the HTTP header `Accept` _header_params['Accept'] = self.api_client.select_header_accept( [ 'application/json' ] ) # authentication setting _auth_settings: List[str] = [ ] return self.api_client.param_serialize( method='GET', resource_path='/api/v1/bioModel/{bioModelID}', path_params=_path_params, query_params=_query_params, header_params=_header_params, body=_body_params, post_params=_form_params, files=_files, auth_settings=_auth_settings, collection_formats=_collection_formats, _host=_host, _request_auth=_request_auth ) @validate_call def get_bio_model_summaries( self, include_public_and_shared: Annotated[Optional[StrictBool], Field(description="Includes BioModel summaries that are public or shared with requester. Default is true.")] = None, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> List[BioModelSummary]: """Return BioModel summaries. :param include_public_and_shared: Includes BioModel summaries that are public or shared with requester. Default is true. :type include_public_and_shared: bool :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_summaries_serialize( include_public_and_shared=include_public_and_shared, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "List[BioModelSummary]", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ).data @validate_call def get_bio_model_summaries_with_http_info( self, include_public_and_shared: Annotated[Optional[StrictBool], Field(description="Includes BioModel summaries that are public or shared with requester. Default is true.")] = None, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> ApiResponse[List[BioModelSummary]]: """Return BioModel summaries. :param include_public_and_shared: Includes BioModel summaries that are public or shared with requester. Default is true. :type include_public_and_shared: bool :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_summaries_serialize( include_public_and_shared=include_public_and_shared, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "List[BioModelSummary]", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ) @validate_call def get_bio_model_summaries_without_preload_content( self, include_public_and_shared: Annotated[Optional[StrictBool], Field(description="Includes BioModel summaries that are public or shared with requester. Default is true.")] = None, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> RESTResponseType: """Return BioModel summaries. :param include_public_and_shared: Includes BioModel summaries that are public or shared with requester. Default is true. :type include_public_and_shared: bool :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_summaries_serialize( include_public_and_shared=include_public_and_shared, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "List[BioModelSummary]", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) return response_data.response def _get_bio_model_summaries_serialize( self, include_public_and_shared, _request_auth, _content_type, _headers, _host_index, ) -> Tuple: _host = None _collection_formats: Dict[str, str] = { } _path_params: Dict[str, str] = {} _query_params: List[Tuple[str, str]] = [] _header_params: Dict[str, Optional[str]] = _headers or {} _form_params: List[Tuple[str, str]] = [] _files: Dict[str, str] = {} _body_params: Optional[bytes] = None # process the path parameters # process the query parameters if include_public_and_shared is not None: _query_params.append(('includePublicAndShared', include_public_and_shared)) # process the header parameters # process the form parameters # process the body parameter # set the HTTP header `Accept` _header_params['Accept'] = self.api_client.select_header_accept( [ 'application/json' ] ) # authentication setting _auth_settings: List[str] = [ ] return self.api_client.param_serialize( method='GET', resource_path='/api/v1/bioModel/summaries', path_params=_path_params, query_params=_query_params, header_params=_header_params, body=_body_params, post_params=_form_params, files=_files, auth_settings=_auth_settings, collection_formats=_collection_formats, _host=_host, _request_auth=_request_auth ) @validate_call def get_bio_model_summary( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> BioModelSummary: """All of the text based information about a BioModel (summary, version, publication status, etc...), but not the actual BioModel itself. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_summary_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "BioModelSummary", '403': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ).data @validate_call def get_bio_model_summary_with_http_info( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> ApiResponse[BioModelSummary]: """All of the text based information about a BioModel (summary, version, publication status, etc...), but not the actual BioModel itself. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_summary_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "BioModelSummary", '403': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ) @validate_call def get_bio_model_summary_without_preload_content( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> RESTResponseType: """All of the text based information about a BioModel (summary, version, publication status, etc...), but not the actual BioModel itself. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_summary_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "BioModelSummary", '403': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) return response_data.response def _get_bio_model_summary_serialize( self, bio_model_id, _request_auth, _content_type, _headers, _host_index, ) -> Tuple: _host = None _collection_formats: Dict[str, str] = { } _path_params: Dict[str, str] = {} _query_params: List[Tuple[str, str]] = [] _header_params: Dict[str, Optional[str]] = _headers or {} _form_params: List[Tuple[str, str]] = [] _files: Dict[str, str] = {} _body_params: Optional[bytes] = None # process the path parameters if bio_model_id is not None: _path_params['bioModelID'] = bio_model_id # process the query parameters # process the header parameters # process the form parameters # process the body parameter # set the HTTP header `Accept` _header_params['Accept'] = self.api_client.select_header_accept( [ 'application/json' ] ) # authentication setting _auth_settings: List[str] = [ ] return self.api_client.param_serialize( method='GET', resource_path='/api/v1/bioModel/{bioModelID}/summary', path_params=_path_params, query_params=_query_params, header_params=_header_params, body=_body_params, post_params=_form_params, files=_files, auth_settings=_auth_settings, collection_formats=_collection_formats, _host=_host, _request_auth=_request_auth ) @validate_call def get_bio_model_vcml( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> str: """Get the BioModel in VCML format. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_vcml_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "str", '403': "VCellHTTPError", '404': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ).data @validate_call def get_bio_model_vcml_with_http_info( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> ApiResponse[str]: """Get the BioModel in VCML format. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_vcml_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "str", '403': "VCellHTTPError", '404': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ) @validate_call def get_bio_model_vcml_without_preload_content( self, bio_model_id: StrictStr, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> RESTResponseType: """Get the BioModel in VCML format. :param bio_model_id: (required) :type bio_model_id: str :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._get_bio_model_vcml_serialize( bio_model_id=bio_model_id, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "str", '403': "VCellHTTPError", '404': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) return response_data.response def _get_bio_model_vcml_serialize( self, bio_model_id, _request_auth, _content_type, _headers, _host_index, ) -> Tuple: _host = None _collection_formats: Dict[str, str] = { } _path_params: Dict[str, str] = {} _query_params: List[Tuple[str, str]] = [] _header_params: Dict[str, Optional[str]] = _headers or {} _form_params: List[Tuple[str, str]] = [] _files: Dict[str, str] = {} _body_params: Optional[bytes] = None # process the path parameters if bio_model_id is not None: _path_params['bioModelID'] = bio_model_id # process the query parameters # process the header parameters # process the form parameters # process the body parameter # set the HTTP header `Accept` _header_params['Accept'] = self.api_client.select_header_accept( [ 'text/xml', 'application/json' ] ) # authentication setting _auth_settings: List[str] = [ ] return self.api_client.param_serialize( method='GET', resource_path='/api/v1/bioModel/{bioModelID}/vcml_download', path_params=_path_params, query_params=_query_params, header_params=_header_params, body=_body_params, post_params=_form_params, files=_files, auth_settings=_auth_settings, collection_formats=_collection_formats, _host=_host, _request_auth=_request_auth ) @validate_call def save_bio_model( self, body: Annotated[StrictStr, Field(description="BioModelVCML which will be saved.")], new_name: Annotated[Optional[StrictStr], Field(description="Name to save new BioModel under. Leave blank if re-saving existing BioModel.")] = None, sims_requiring_updates: Annotated[Optional[List[StrictStr]], Field(description="The name of simulations that will be prepared for future execution.")] = None, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> str: """Save's the given BioModel. Optional parameters of name and simulations to update due to math changes. Returns saved BioModel as VCML. :param body: BioModelVCML which will be saved. (required) :type body: str :param new_name: Name to save new BioModel under. Leave blank if re-saving existing BioModel. :type new_name: str :param sims_requiring_updates: The name of simulations that will be prepared for future execution. :type sims_requiring_updates: List[str] :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._save_bio_model_serialize( body=body, new_name=new_name, sims_requiring_updates=sims_requiring_updates, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "str", '401': "VCellHTTPError", '403': None, '422': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ).data @validate_call def save_bio_model_with_http_info( self, body: Annotated[StrictStr, Field(description="BioModelVCML which will be saved.")], new_name: Annotated[Optional[StrictStr], Field(description="Name to save new BioModel under. Leave blank if re-saving existing BioModel.")] = None, sims_requiring_updates: Annotated[Optional[List[StrictStr]], Field(description="The name of simulations that will be prepared for future execution.")] = None, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> ApiResponse[str]: """Save's the given BioModel. Optional parameters of name and simulations to update due to math changes. Returns saved BioModel as VCML. :param body: BioModelVCML which will be saved. (required) :type body: str :param new_name: Name to save new BioModel under. Leave blank if re-saving existing BioModel. :type new_name: str :param sims_requiring_updates: The name of simulations that will be prepared for future execution. :type sims_requiring_updates: List[str] :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._save_bio_model_serialize( body=body, new_name=new_name, sims_requiring_updates=sims_requiring_updates, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "str", '401': "VCellHTTPError", '403': None, '422': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) response_data.read() return self.api_client.response_deserialize( response_data=response_data, response_types_map=_response_types_map, ) @validate_call def save_bio_model_without_preload_content( self, body: Annotated[StrictStr, Field(description="BioModelVCML which will be saved.")], new_name: Annotated[Optional[StrictStr], Field(description="Name to save new BioModel under. Leave blank if re-saving existing BioModel.")] = None, sims_requiring_updates: Annotated[Optional[List[StrictStr]], Field(description="The name of simulations that will be prepared for future execution.")] = None, _request_timeout: Union[ None, Annotated[StrictFloat, Field(gt=0)], Tuple[ Annotated[StrictFloat, Field(gt=0)], Annotated[StrictFloat, Field(gt=0)] ] ] = None, _request_auth: Optional[Dict[StrictStr, Any]] = None, _content_type: Optional[StrictStr] = None, _headers: Optional[Dict[StrictStr, Any]] = None, _host_index: Annotated[StrictInt, Field(ge=0, le=0)] = 0, ) -> RESTResponseType: """Save's the given BioModel. Optional parameters of name and simulations to update due to math changes. Returns saved BioModel as VCML. :param body: BioModelVCML which will be saved. (required) :type body: str :param new_name: Name to save new BioModel under. Leave blank if re-saving existing BioModel. :type new_name: str :param sims_requiring_updates: The name of simulations that will be prepared for future execution. :type sims_requiring_updates: List[str] :param _request_timeout: timeout setting for this request. If one number provided, it will be total request timeout. It can also be a pair (tuple) of (connection, read) timeouts. :type _request_timeout: int, tuple(int, int), optional :param _request_auth: set to override the auth_settings for an a single request; this effectively ignores the authentication in the spec for a single request. :type _request_auth: dict, optional :param _content_type: force content-type for the request. :type _content_type: str, Optional :param _headers: set to override the headers for a single request; this effectively ignores the headers in the spec for a single request. :type _headers: dict, optional :param _host_index: set to override the host_index for a single request; this effectively ignores the host_index in the spec for a single request. :type _host_index: int, optional :return: Returns the result object. """ # noqa: E501 _param = self._save_bio_model_serialize( body=body, new_name=new_name, sims_requiring_updates=sims_requiring_updates, _request_auth=_request_auth, _content_type=_content_type, _headers=_headers, _host_index=_host_index ) _response_types_map: Dict[str, Optional[str]] = { '200': "str", '401': "VCellHTTPError", '403': None, '422': "VCellHTTPError", '500': "VCellHTTPError" } response_data = self.api_client.call_api( *_param, _request_timeout=_request_timeout ) return response_data.response def _save_bio_model_serialize( self, body, new_name, sims_requiring_updates, _request_auth, _content_type, _headers, _host_index, ) -> Tuple: _host = None _collection_formats: Dict[str, str] = { 'simsRequiringUpdates': 'multi', } _path_params: Dict[str, str] = {} _query_params: List[Tuple[str, str]] = [] _header_params: Dict[str, Optional[str]] = _headers or {} _form_params: List[Tuple[str, str]] = [] _files: Dict[str, str] = {} _body_params: Optional[bytes] = None # process the path parameters # process the query parameters if new_name is not None: _query_params.append(('newName', new_name)) if sims_requiring_updates is not None: _query_params.append(('simsRequiringUpdates', sims_requiring_updates)) # process the header parameters # process the form parameters # process the body parameter if body is not None: _body_params = body # set the HTTP header `Accept` _header_params['Accept'] = self.api_client.select_header_accept( [ 'application/xml', 'application/json' ] ) # set the HTTP header `Content-Type` if _content_type: _header_params['Content-Type'] = _content_type else: _default_content_type = ( self.api_client.select_header_content_type( [ 'application/xml' ] ) ) if _default_content_type is not None: _header_params['Content-Type'] = _default_content_type # authentication setting _auth_settings: List[str] = [ 'openId' ] return self.api_client.param_serialize( method='POST', resource_path='/api/v1/bioModel', path_params=_path_params, query_params=_query_params, header_params=_header_params, body=_body_params, post_params=_form_params, files=_files, auth_settings=_auth_settings, collection_formats=_collection_formats, _host=_host, _request_auth=_request_auth )