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# University of Virginia, University of Heidelberg, and University
# of Connecticut School of Medicine.
# All rights reserved.
# Copyright (C) 2017 - 2018 by Pedro Mendes, Virginia Tech Intellectual
# Properties, Inc., University of Heidelberg, and University of
# of Connecticut School of Medicine.
# All rights reserved.
# Copyright (C) 2012 - 2016 by Pedro Mendes, Virginia Tech Intellectual
# Properties, Inc., University of Heidelberg, and The University
# of Manchester.
# All rights reserved.
# Try to find the CLAPACK library
# Once done this will define
#
# CLAPACK_FOUND - system has clapack
# CLAPACK_INCLUDE_DIR - the clapack include directory
# CLAPACK_LIBRARIES - Link these to use clapack
# TODO USE_BLASWRAP - whether clapack was compiled with blaswrap support
# Goto,
# ATLAS,
# PhiPACK,
# CXML,
# DXML,
# SunPerf,
# SCSL,
# SGIMATH,
# IBMESSL,
# Intel10_32 (intel mkl v10 32 bit),
# Intel10_64lp (intel mkl v10 64 bit,lp thread model, lp64 model),
# Intel( older versions of mkl 32 and 64 bit),
# ACML,
# ACML_MP,
# ACML_GPU,
# Apple,
# NAS,
# Generic
string(TOUPPER ${PROJECT_NAME} _UPPER_PROJECT_NAME)
set(_PROJECT_DEPENDENCY_DIR ${_UPPER_PROJECT_NAME}_DEPENDENCY_DIR)
set(LAPACK_FIND_QUIETLY TRUE)
set(BLA_STATIC TRUE)
set(LAPACK_STATIC TRUE)
if (APPLE)
set(BLA_VENDOR "Apple")
find_package(LAPACK)
endif()
if (BLAS_FOUND AND APPLE)
add_definitions(-DHAVE_APPLE)
if (NOT CLAPACK_INCLUDE_DIR)
# as it turns out the new OSX has different definitions for blas
# it is a bit hard to find the right directory, so lets try here
exec_program(xcode-select ARGS -print-path OUTPUT_VARIABLE CMAKE_XCODE_DEVELOPER_DIR)
find_path(CLAPACK_INCLUDE_DIR cblas.h
PATHS
${CMAKE_OSX_SYSROOT}/System/Library/Frameworks/Accelerate.framework/Versions/Current/Frameworks/vecLib.framework/Headers/
${CMAKE_XCODE_DEVELOPER_DIR}/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/System/Library/Frameworks/Accelerate.framework/Versions/Current/Frameworks/vecLib.framework/Headers/
)
if (CLAPACK_INCLUDE_DIR)
add_definitions(-DHAVE_CBLAS_H)
endif()
if (NOT CLAPACK_INCLUDE_DIR)
# fallback
set(CLAPACK_INCLUDE_DIR "${COPASI_SOURCE_DIR}")
endif (NOT CLAPACK_INCLUDE_DIR)
else()
add_definitions(-DHAVE_CBLAS_H)
endif (NOT CLAPACK_INCLUDE_DIR)
if (NOT CLAPACK_LIBRARIES)
set(CLAPACK_LIBRARIES ${BLAS_LIBRARIES})
endif(NOT CLAPACK_LIBRARIES)
endif()
if (LAPACK_FOUND)
add_definitions(-DHAVE_APPLE)
if (NOT CLAPACK_INCLUDE_DIR)
set(CLAPACK_INCLUDE_DIR "${COPASI_SOURCE_DIR}")
endif (NOT CLAPACK_INCLUDE_DIR)
if (NOT CLAPACK_LIBRARIES)
set(CLAPACK_LIBRARIES ${LAPACK_LIBRARIES})
endif(NOT CLAPACK_LIBRARIES)
if (NOT CLAPACK_LINKER_FLAGS)
set(CLAPACK_LINKER_FLAGS ${LAPACK_LINKER_FLAGS})
endif(NOT CLAPACK_LINKER_FLAGS)
endif ()
if (NOT LAPACK_FOUND)
# cmake MKL Detection does only support MKL version 10 and older
if (DEFINED ENV{MKLROOT})
message(STATUS "MKLROOT is: $ENV{MKLROOT}")
set(MKLROOT $ENV{MKLROOT} CACHE PATH "MKLROOT" FORCE)
endif()
if (DEFINED MKLROOT)
set(BLA_VENDOR "Intel (MKL)")
if (UNIX)
if ((COPASI_BUILD_TYPE EQUAL "32bit") AND EXISTS ${MKLROOT}/lib/ia32)
set(LAPACK_LIBRARIES "-Wl,--start-group ${MKLROOT}/lib/ia32/libmkl_intel.a ${MKLROOT}/lib/ia32/libmkl_core.a ${MKLROOT}/lib/ia32/libmkl_sequential.a -Wl,--end-group -lpthread -lm -ldl")
elseif (COPASI_BUILD_TYPE EQUAL "64bit" AND EXISTS ${MKLROOT}/lib/intel64)
set(LAPACK_LIBRARIES "-Wl,--start-group ${MKLROOT}/lib/intel64/libmkl_intel_lp64.a ${MKLROOT}/lib/intel64/libmkl_core.a ${MKLROOT}/lib/intel64/libmkl_sequential.a -Wl,--end-group -lpthread -lm -ldl")
elseif(EXISTS "${MKLROOT}/lib" AND EXISTS "${MKLROOT}/lib/libmkl_intel_lp64.a")
set(LAPACK_LIBRARIES "-Wl,--start-group ${MKLROOT}/lib/libmkl_intel_lp64.a ${MKLROOT}/lib/libmkl_core.a ${MKLROOT}/lib/libmkl_sequential.a -Wl,--end-group -lpthread -lm -ldl")
elseif(EXISTS ${MKLROOT}/lib AND EXISTS ${MKLROOT}/lib/libmkl_intel.a)
set(LAPACK_LIBRARIES "-Wl,--start-group ${MKLROOT}/lib/libmkl_intel.a ${MKLROOT}/lib/libmkl_core.a ${MKLROOT}/lib/libmkl_sequential.a -Wl,--end-group -lpthread -lm -ldl")
endif ()
else ()
if (COPASI_BUILD_TYPE EQUAL "32bit" AND EXISTS "${MKLROOT}/lib/ia32/")
set(LAPACK_LIBRARIES "${MKLROOT}/lib/ia32/mkl_intel_c.lib" "${MKLROOT}/lib/ia32/mkl_core.lib" "${MKLROOT}/lib/ia32/mkl_sequential.lib")
elseif (COPASI_BUILD_TYPE EQUAL "64bit" AND EXISTS "${MKLROOT}/lib/intel64/" )
set(LAPACK_LIBRARIES "${MKLROOT}/lib/intel64/mkl_intel_lp64.lib" "${MKLROOT}/lib/intel64/mkl_core.lib" "${MKLROOT}/lib/intel64/mkl_sequential.lib")
elseif (EXISTS "${MKLROOT}/lib/mkl_intel_lp64.lib")
set(LAPACK_LIBRARIES "${MKLROOT}/lib/mkl_intel_lp64.lib" "${MKLROOT}/lib/mkl_core.lib" "${MKLROOT}/lib/mkl_sequential.lib")
endif ()
endif ()
set(CLAPACK_INCLUDE_DIR ${MKLROOT}/include)
add_definitions(-DHAVE_MKL)
set(LAPACK_FOUND "Yes")
set(USE_MKL 1)
endif ()
endif ()
if (NOT LAPACK_FOUND AND DEFINED ENV{LAPACK_DIR} AND EXISTS $ENV{LAPACK_DIR})
message (status " Using COPASI Dependencies for LAPACK")
# clapack
set (CLAPACK_INCLUDE_DIR $ENV{LAPACK_DIR}/include CACHE PATH "clapack include directory" FORCE)
find_library(CLAPACK_LIBRARY_LAPACK
NAMES lapack
PATHS $ENV{LAPACK_DIR}/${CMAKE_INSTALL_LIBDIR} ${${_PROJECT_DEPENDENCY_DIR}}/${CMAKE_INSTALL_LIBDIR}
NO_DEFAULT_PATH)
find_library(CLAPACK_LIBRARY_BLAS
NAMES blas
PATHS $ENV{LAPACK_DIR}/${CMAKE_INSTALL_LIBDIR} ${${_PROJECT_DEPENDENCY_DIR}}/${CMAKE_INSTALL_LIBDIR}
NO_DEFAULT_PATH)
find_library(CLAPACK_LIBRARY_F2C
NAMES f2c
PATHS $ENV{LAPACK_DIR}/${CMAKE_INSTALL_LIBDIR} ${${_PROJECT_DEPENDENCY_DIR}}/${CMAKE_INSTALL_LIBDIR}
NO_DEFAULT_PATH)
set (CLAPACK_LIBRARIES
${CLAPACK_LIBRARY_LAPACK};${CLAPACK_LIBRARY_BLAS};${CLAPACK_LIBRARY_F2C}
CACHE FILEPATH "lapack library" FORCE)
add_definitions(-DHAVE_BLASWRAP_H)
add_definitions(-DHAVE_F2C_H)
add_definitions(-DHAVE_CLAPACK_H)
add_definitions(-DNO_BLAS_WRAP)
set (BLA_VENDOR "COPASI Dependencies")
set (LAPACK_FOUND "Yes")
endif()
if (NOT LAPACK_FOUND AND LINUX)
set(TMP ${CMAKE_FIND_LIBRARY_SUFFIXES})
set(CMAKE_FIND_LIBRARY_SUFFIXES ${CMAKE_FIND_LIBRARY_SUFFIXES} .so.3)
find_library( GFORTRAN_LIBRARY
NAMES gfortran
PATHS ENV LD_LIBRARY_PATH )
set(CMAKE_FIND_LIBRARY_SUFFIXES ${TMP})
if (GFORTRAN_LIBRARY)
set(CMAKE_FIND_LIBRARY_SUFFIXES ${CMAKE_FIND_LIBRARY_SUFFIXES} .so.3gf)
endif ()
endif ()
if (NOT LAPACK_FOUND)
set(BLA_VENDOR "ATLAS")
find_package(LAPACK)
endif()
if (NOT LAPACK_FOUND)
set(BLA_VENDOR "Generic")
find_package(LAPACK REQUIRED)
endif()
if (LAPACK_FOUND AND GFORTRAN_LIBRARY)
set(LAPACK_LIBRARIES ${LAPACK_LIBRARIES} ${GFORTRAN_LIBRARY} m)
endif()
if (NOT BLASWRAP_INCLUDE_DIR)
find_path(BLASWRAP_INCLUDE_DIR blaswrap.h
PATHS $ENV{LAPACK_DIR}/include
$ENV{LAPACK_DIR}
~/Library/Frameworks
/Library/Frameworks
/usr/local/include
/usr/include/
/sw/include # Fink
/opt/local/include # DarwinPorts
/opt/csw/include # Blastwave
/opt/include
/usr/freeware/include
)
endif(NOT BLASWRAP_INCLUDE_DIR)
if (BLASWRAP_INCLUDE_DIR)
add_definitions(-DHAVE_BLASWRAP_H)
endif (BLASWRAP_INCLUDE_DIR)
if (NOT F2C_INCLUDE_DIR)
find_path(F2C_INCLUDE_DIR f2c.h
PATHS $ENV{LAPACK_DIR}/include
$ENV{LAPACK_DIR}
~/Library/Frameworks
/Library/Frameworks
/usr/local/include
/usr/include/
/sw/include # Fink
/opt/local/include # DarwinPorts
/opt/csw/include # Blastwave
/opt/include
/usr/freeware/include
)
endif(NOT F2C_INCLUDE_DIR)
if (F2C_INCLUDE_DIR)
add_definitions(-DHAVE_F2C_H)
endif (F2C_INCLUDE_DIR)
if (NOT BLAS_INCLUDE_DIR)
find_path(BLAS_INCLUDE_DIR blas.h
PATHS $ENV{LAPACK_DIR}/include
$ENV{LAPACK_DIR}
~/Library/Frameworks
/Library/Frameworks
/usr/local/include
/usr/include/
/sw/include # Fink
/opt/local/include # DarwinPorts
/opt/csw/include # Blastwave
/opt/include
/usr/freeware/include
)
endif(NOT BLAS_INCLUDE_DIR)
if (BLAS_INCLUDE_DIR)
add_definitions(-DHAVE_BLAS_H)
endif (BLAS_INCLUDE_DIR)
if (NOT LAPACKWRAP_INCLUDE_DIR)
find_path(LAPACKWRAP_INCLUDE_DIR lapackwrap.h
PATHS $ENV{LAPACK_DIR}/include
$ENV{LAPACK_DIR}
~/Library/Frameworks
/Library/Frameworks
/usr/local/include
/usr/include/
/sw/include # Fink
/opt/local/include # DarwinPorts
/opt/csw/include # Blastwave
/opt/include
/usr/freeware/include
)
endif( NOT LAPACKWRAP_INCLUDE_DIR)
if (LAPACKWRAP_INCLUDE_DIR)
add_definitions(-DHAVE_LAPACKWRAP_H)
endif (LAPACKWRAP_INCLUDE_DIR)
if(NOT CLAPACK_INCLUDE_DIR)
find_path(CLAPACK_INCLUDE_DIR clapack.h
PATHS $ENV{LAPACK_DIR}/include
$ENV{LAPACK_DIR}
~/Library/Frameworks
/Library/Frameworks
/usr/local/include
/usr/include/
/sw/include # Fink
/opt/local/include # DarwinPorts
/opt/csw/include # Blastwave
/opt/include
/usr/freeware/include
)
endif(NOT CLAPACK_INCLUDE_DIR)
if (CLAPACK_INCLUDE_DIR AND NOT DEFINED MKLROOT)
add_definitions(-DHAVE_CLAPACK_H)
endif (CLAPACK_INCLUDE_DIR AND NOT DEFINED MKLROOT)
if (NOT CLAPACK_INCLUDE_DIR)
find_path(CLAPACK_INCLUDE_DIR lapack.h
PATHS $ENV{LAPACK_DIR}/include
$ENV{LAPACK_DIR}
~/Library/Frameworks
/Library/Frameworks
/usr/local/include
/usr/include/
/sw/include # Fink
/opt/local/include # DarwinPorts
/opt/csw/include # Blastwave
/opt/include
/usr/freeware/include
)
if (CLAPACK_INCLUDE_DIR)
add_definitions(-DHAVE_LAPACK_H)
endif (CLAPACK_INCLUDE_DIR)
endif (NOT CLAPACK_INCLUDE_DIR)
if (NOT CLAPACK_INCLUDE_DIR)
set(CLAPACK_INCLUDE_DIR "${COPASI_SOURCE_DIR}/copasi/lapack")
endif (NOT CLAPACK_INCLUDE_DIR)
if (NOT CLAPACK_LIBRARIES)
set(CLAPACK_LIBRARIES ${LAPACK_LIBRARIES})
endif(NOT CLAPACK_LIBRARIES)
if (NOT CLAPACK_LINKER_FLAGS)
set(CLAPACK_LINKER_FLAGS ${LAPACK_LINKER_FLAGS})
endif(NOT CLAPACK_LINKER_FLAGS)
if (NOT CLAPACK_LIBRARIES AND NOT APPLE)
if (CONAN_LIB_DIRS_LAPACK)
find_library( LAPACK_LIBRARY
NAMES liblapack lapack lapack.dll
PATHS ${CONAN_LIB_DIRS_LAPACK} )
find_library( BLAS_LIBRARY
NAMES libblas blas blas.dll
PATHS ${CONAN_LIB_DIRS_LAPACK} )
SET (CLAPACK_LIBRARIES ${LAPACK_LIBRARY} ${BLAS_LIBRARY})
SET (BLA_VENDOR "Conan")
endif(CONAN_LIB_DIRS_LAPACK)
if (CONAN_LIB_DIRS_CLAPACK)
find_library( LAPACK_LIBRARY
NAMES liblapack lapack liblapack.a
PATHS ${CONAN_LIB_DIRS_CLAPACK} )
find_library( BLAS_LIBRARY
NAMES libblas blas libblas.a
PATHS ${CONAN_LIB_DIRS_CLAPACK} )
find_library( F2C_LIBRARY
NAMES libf2c libf2c.a
PATHS ${CONAN_LIB_DIRS_CLAPACK} )
SET (CLAPACK_LIBRARIES ${LAPACK_LIBRARY} ${BLAS_LIBRARY} ${F2C_LIBRARY})
SET (CLAPACK_INCLUDE_DIR ${CONAN_INCLUDE_DIRS_CLAPACK})
SET (F2C_INCLUDE_DIR ${CONAN_INCLUDE_DIRS_CLAPACK})
SET (BLASWRAP_INCLUDE_DIR ${CONAN_INCLUDE_DIRS_CLAPACK})
SET (BLA_VENDOR "COPASI Dependencies")
add_definitions(-DHAVE_BLASWRAP_H)
add_definitions(-DHAVE_F2C_H)
add_definitions(-DHAVE_CLAPACK_H)
add_definitions(-DNO_BLAS_WRAP)
endif(CONAN_LIB_DIRS_CLAPACK)
endif(NOT CLAPACK_LIBRARIES AND NOT APPLE)
# find_library(CLAPACK_LIBRARIES NAMES clapack libclapack lapack liblapapack)
# handle the QUIETLY and REQUIRED arguments and set CLAPACK_FOUND to TRUE if
# all listed variables are TRUE
include(FindPackageHandleStandardArgs)
FIND_PACKAGE_HANDLE_STANDARD_ARGS(CLAPACK DEFAULT_MSG CLAPACK_LIBRARIES CLAPACK_INCLUDE_DIR BLA_VENDOR)
mark_as_advanced(CLAPACK_INCLUDE_DIR CLAPACK_LIBRARIES BLA_VENDOR)
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