File size: 2,860 Bytes
7e59e4c | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 | #!/bin/bash
# Copyright (C) 2015 by Pedro Mendes, Virginia Tech Intellectual
# Properties, Inc., University of Heidelberg, and The University
# of Manchester.
# All rights reserved.
#
# This script expects up to three arguments:
#
# 1: the version to create (defaults to 4.14.92)
# 2: the source dir (defaults to ../COPASI)
# 3: the binary dir (defaults to ../package)
# 4: the dependency dir (defaults to /mnt/hgfs/share
#
DIRECTORY=$(cd `dirname $0` && pwd)
DEP_DIR=$4
if [ "_$DEP_DIR" = "_" ]; then
DEP_DIR=/mnt/hgfs/share
fi
OS=LINUX
DEP_SUFFIX=-32
VERSION=$1
if [ "_$VERSION" = "_" ]; then
VERSION=4.15.93
fi
ARCH=`uname -m`
if [ $ARCH = "x86_64" ]; then
DEP_SUFFIX=-64
fi
if [ -d "/Applications/" ]; then
OS=DARWIN
DEP_SUFFIX=
fi
DEP_DIR_NAME=dependencies$DEP_SUFFIX
SRC_DIR=$2
if [ "_$SRC_DIR" = "_" ]; then
SRC_DIR=$DIRECTORY/../COPASI
fi
BIN_DIR=$3
if [ "_$BIN_DIR" = "_" ]; then
BIN_DIR=$DIRECTORY/../package
fi
if [ ! -d $BIN_DIR/copasi ]; then
echo invalid bin dir
exit 1;
fi
if [ ! -d $BIN_DIR/copasi/bindings/python ]; then
echo copasi has not been configured with python.
exit 1;
fi
if [ ! -f $BIN_DIR/copasi/bindings/python/copasi_wrapper.cpp ]; then
echo swig bindings have not been created. Please build copasi with python bindings.
exit 1;
fi
PKG_DIR=$DIRECTORY/python-copasi-$VERSION
if [ -d "$PKG_DIR" ]; then
echo Already have a dir for $VERSION;
exit 1;
fi;
mkdir $PKG_DIR
mkdir $PKG_DIR/cpp-api
mkdir $PKG_DIR/common
mkdir $PKG_DIR/COPASI
mkdir $PKG_DIR/script
mkdir $PKG_DIR/src
mkdir $PKG_DIR/LINUX
mkdir $PKG_DIR/LINUX/dependencies-32
mkdir $PKG_DIR/LINUX/dependencies-64
mkdir $PKG_DIR/DARWIN
# create the files
sed 's/@VERSION@/$VERSION/g' $DIRECTORY/PKG-INFO > $PKG_DIR/PKG-INFO
sed 's/@VERSION@/$VERSION/g' $DIRECTORY/setup.py.in > $PKG_DIR/setup.py
# copy cpp headers
(cd $SRC_DIR && find -name '*.h' -print | tar --create --files-from -) | (cd $PKG_DIR/cpp-api && tar xfp -)
# copy SWIG files
cp $SRC_DIR/copasi/bindings/common/*.cpp $PKG_DIR/common
cp $SRC_DIR/copasi/bindings/python/*.cpp $PKG_DIR/src
cp $BIN_DIR/copasi/bindings/python/*.cpp $PKG_DIR/src
cp $BIN_DIR/copasi/bindings/python/*.py $PKG_DIR/script
# copy dependencies
pushd $PKG_DIR/LINUX/dependencies-32
tar zxf $DEP_DIR/LINUX/dependencies-32.tar.gz
cd $PKG_DIR/$OS/dependencies-32/lib
tar zxf $DEP_DIR/LINUX/se-32.tar.gz
popd
pushd $PKG_DIR/LINUX/dependencies-64
tar zxf $DEP_DIR/LINUX/dependencies-64.tar.gz
cd $PKG_DIR/$OS/dependencies-64/lib
tar zxf $DEP_DIR/LINUX/se-64.tar.gz
popd
# copy se libraries
cp $BIN_DIR/copasi/libCOPASISE.a $PKG_DIR/$OS/dependencies$DEP_SUFFIX/lib
cd $DIRECTORY
if [ -d $PKG_DIR/build ]; then
rm -rf $PKG_DIR/build
fi
tar -cf python-copasi-$VERSION.tar python-copasi-$VERSION
gzip python-copasi-$VERSION.tar
# test build
pushd $PKG_DIR
python setup.py build
popd
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