# This file is used to define the extra feature dimensions of different modules. INPUTFEATS_DIMS = { "restype": 35, "profile": 32, "deletion_mean": 1, "is_hotspot_residue": 1 } # used by src.model.modules.embedders.InputFeatureEmbedder RELPOSENC_DIMS = { "asym_id": 1, "residue_index": 1, "entity_id": 1, "sym_id": 1, "token_index": 1, } # used by src.model.modules.embedders.RelativePositionEncoding MSAFEATS_DIMS = { "msa": 32, "has_deletion": 1, "deletion_value": 1, } # used by src.model.modules.pairformer.MSAModule ATOMATTNENC_DIMS = { "ref_mask": 1, "ref_element": 129, "ref_atom_name_chars": 4 * 64, } # used by src.model.modules.transformer.AtomAttentionEncoder