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The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError
Exception: DatasetGenerationCastError
Message: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 6 new columns ({'Kcat/Km', 'Enzyme', 'Km', 'Kcat', 'Commentary[Cosubstrate]', 'Substrate'}) and 11 missing columns ({'km', 'Unit_Kobs', 'Ribozyme', 'Source', 'Km_kcat', 'Unit_Kcleav', 'Kcleav', 'kcat', 'Commentary[Others]', 'Variable_reactant', 'Kobs'}).
This happened while the csv dataset builder was generating data using
hf://datasets/jackkuo/LLM-Enzyme-Kinetics-Archive-LLENKA/3435_merged_data_claude3.5_hu.csv (at revision 76d4700bfb6a5b338e79e0341eae13e819150698)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1870, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 622, in write_table
pa_table = table_cast(pa_table, self._schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2292, in table_cast
return cast_table_to_schema(table, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2240, in cast_table_to_schema
raise CastError(
datasets.table.CastError: Couldn't cast
Enzyme: string
Organism: string
Substrate: string
Km: string
Unit_Km: string
Kcat: string
Unit_Kcat: string
Kcat/Km: string
Unit_Kcat/Km: string
Commentary[Temp]: string
Commentary[pH]: string
Commentary[Mutant]: string
Commentary[Cosubstrate]: string
pubmed_id: int64
-- schema metadata --
pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 1948
to
{'Ribozyme': Value(dtype='string', id=None), 'Organism': Value(dtype='string', id=None), 'Variable_reactant': Value(dtype='string', id=None), 'Kobs': Value(dtype='float64', id=None), 'Unit_Kobs': Value(dtype='string', id=None), 'km': Value(dtype='float64', id=None), 'Unit_Km': Value(dtype='string', id=None), 'kcat': Value(dtype='float64', id=None), 'Unit_Kcat': Value(dtype='string', id=None), 'Unit_Kcat/Km': Value(dtype='string', id=None), 'Kcleav': Value(dtype='float64', id=None), 'Unit_Kcleav': Value(dtype='string', id=None), 'Commentary[Temp]': Value(dtype='string', id=None), 'Commentary[pH]': Value(dtype='string', id=None), 'Commentary[Mutant]': Value(dtype='string', id=None), 'Commentary[Others]': Value(dtype='string', id=None), 'pubmed_id': Value(dtype='string', id=None), 'Source': Value(dtype='string', id=None), 'Km_kcat': Value(dtype='float64', id=None)}
because column names don't match
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1438, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1050, in convert_to_parquet
builder.download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 924, in download_and_prepare
self._download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1000, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1741, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1872, in _prepare_split_single
raise DatasetGenerationCastError.from_cast_error(
datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 6 new columns ({'Kcat/Km', 'Enzyme', 'Km', 'Kcat', 'Commentary[Cosubstrate]', 'Substrate'}) and 11 missing columns ({'km', 'Unit_Kobs', 'Ribozyme', 'Source', 'Km_kcat', 'Unit_Kcleav', 'Kcleav', 'kcat', 'Commentary[Others]', 'Variable_reactant', 'Kobs'}).
This happened while the csv dataset builder was generating data using
hf://datasets/jackkuo/LLM-Enzyme-Kinetics-Archive-LLENKA/3435_merged_data_claude3.5_hu.csv (at revision 76d4700bfb6a5b338e79e0341eae13e819150698)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
Ribozyme
string | Organism
null | Variable_reactant
string | Kobs
null | Unit_Kobs
null | km
float64 | Unit_Km
string | kcat
float64 | Unit_Kcat
string | Unit_Kcat/Km
string | Kcleav
null | Unit_Kcleav
null | Commentary[Temp]
string | Commentary[pH]
string | Commentary[Mutant]
string | Commentary[Others]
string | pubmed_id
string | Source
string | Km_kcat
float64 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Hammerhead
| null |
S13
| null | null | 0.000038
|
mM
| 0.006667
|
s^-1
|
mM^-1s^-1
| null | null |
30°C
|
8
|
WT
|
10 mM MgCl2
|
1280808
|
Table
| 166.666667
|
Hammerhead
| null |
S13
| null | null | 0.000059
|
mM
| 0.148333
|
s^-1
|
mM^-1s^-1
| null | null |
30°C
|
8
|
DNA-armed
|
10 mM MgCl2
|
1280808
|
Table
| 2,500
|
rz.GH
| null |
rGAG
| null | null | 0.000038
|
mM
| 0.000317
|
s^-1
| null | null | null |
55°C
|
8.5
|
WT
| null |
1408757
|
Table
| null |
rz.GH
| null |
dGAGrUCA
| null | null | 0.000056
|
mM
| 0.00145
|
s^-1
| null | null | null |
55°C
|
8.5
|
WT
| null |
1408757
|
Table
| null |
rz.DRD
| null |
rGAG
| null | null | 0.000064
|
mM
| 0.000317
|
s^-1
| null | null | null |
55°C
|
8.5
|
DNA in base-pairing sequences and stem-loop II
| null |
1408757
|
Table
| null |
rz.DRD
| null |
dGAGrUCA
| null | null | 0.000196
|
mM
| 0.0004
|
s^-1
| null | null | null |
55°C
|
8.5
|
DNA in base-pairing sequences and stem-loop II
| null |
1408757
|
Table
| null |
rz.DRD
| null |
dGAGrUCA
| null | null | 0.000048
|
mM
| 0.0002
|
s^-1
| null | null | null |
50°C
|
8.5
|
DNA in base-pairing sequences and stem-loop II
| null |
1408757
|
Table
| null |
rz.RLoop
| null |
rGAG
| null | null | 0.000064
|
mM
| 0.0021
|
s^-1
| null | null | null |
55°C
|
8.5
|
DNA in base-pairing sequences only
| null |
1408757
|
Table
| null |
rz.RLoop
| null |
dGAGrUCA
| null | null | 0.000091
|
mM
| 0.0018
|
s^-1
| null | null | null |
55°C
|
8.5
|
DNA in base-pairing sequences only
| null |
1408757
|
Table
| null |
rz.GH
| null |
rGAG
| null | null | null | null | 0.000333
|
s^-1
| null | null | null |
55°C
|
8.5
|
WT
| null |
1408757
|
Text
| null |
RZ1
| null |
α-lac mRNA
| null | null | 0.00017
|
mM
| 0.3
|
mol/min
|
mM^-1s^-1
| null | null |
37°C
|
8
|
WT
|
20 mM MgCl2
|
1425576
|
Table
| 30
|
RZ2
| null |
α-lac mRNA
| null | null | 0.00027
|
mM
| 0.4
|
mol/min
|
mM^-1s^-1
| null | null |
37°C
|
8
|
WT
|
20 mM MgCl2
|
1425576
|
Table
| 25
|
RZ3
| null |
α-lac mRNA
| null | null | 0.00062
|
mM
| 1.1
|
mol/min
|
mM^-1s^-1
| null | null |
37°C
|
8
|
WT
|
20 mM MgCl2
|
1425576
|
Table
| 30
|
RZ4a
| null |
α-lac mRNA
| null | null | 0.00028
|
mM
| 0.3
|
mol/min
|
mM^-1s^-1
| null | null |
37°C
|
8
|
WT
|
20 mM MgCl2
|
1425576
|
Table
| 18.333333
|
RZ4b
| null |
α-lac mRNA
| null | null | 0.00028
|
mM
| 0.5
|
mol/min
|
mM^-1s^-1
| null | null |
37°C
|
8
|
WT
|
20 mM MgCl2
|
1425576
|
Table
| 30
|
RZ5
| null |
α-lac mRNA
| null | null | 0.00041
|
mM
| 1.5
|
mol/min
|
mM^-1s^-1
| null | null |
37°C
|
8
|
WT
|
20 mM MgCl2
|
1425576
|
Table
| 61.666667
|
Hammerhead
| null | null | null | null | 0.00088
|
mM
| 0.015667
|
s^-1
|
mM^-1s^-1
| null | null |
55°C
|
8
|
WT
|
10 mM Mg^2+
|
1570323
|
Table
| 18.333333
|
Hammerhead
| null | null | null | null | 0.0042
|
mM
| 0.000233
|
s^-1
|
mM^-1s^-1
| null | null |
55°C
|
8
|
I^10
|
10 mM Mg^2+
|
1570323
|
Table
| 0.055
|
Hammerhead
| null | null | null | null | 0.0069
|
mM
| 0.000095
|
s^-1
|
mM^-1s^-1
| null | null |
55°C
|
8
|
dG^10
|
10 mM Mg^2+
|
1570323
|
Table
| 0.013667
|
Hammerhead
| null | null | null | null | 0.013
|
mM
| 0.0008
|
s^-1
|
mM^-1s^-1
| null | null |
55°C
|
8
|
dG^13
|
10 mM Mg^2+
|
1570323
|
Table
| 0.058333
|
Hammerhead 6
| null | null | null | null | 0.000046
|
mM
| 0.025
|
s^-1
|
nM^-1·min^-1
| null | null |
25°C
|
7.5
| null |
10 mM MgCl2
|
1689847
|
Table
| 0.032
|
Hammerhead 8
| null | null | null | null | 0.000041
|
mM
| 0.016667
|
s^-1
|
nM^-1·min^-1
| null | null |
25°C
|
7.5
| null |
10 mM MgCl2
|
1689847
|
Table
| 0.024
|
Hammerhead 9
| null | null | null | null | 0.00016
|
mM
| 0.025
|
s^-1
|
nM^-1·min^-1
| null | null |
25°C
|
7.5
| null |
10 mM MgCl2
|
1689847
|
Table
| 0.0093
|
Hammerhead 10
| null | null | null | null | 0.0023
|
mM
| 0.016667
|
s^-1
|
nM^-1·min^-1
| null | null |
25°C
|
7.5
| null |
10 mM MgCl2
|
1689847
|
Table
| 0.00044
|
Hammerhead
| null | null | null | null | 0.000154
|
mM
| 0.0385
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
WT
|
10 mM MgCl2
|
1736306
|
Table
| 250
|
Hammerhead
| null | null | null | null | 0.000041
|
mM
| 0.0001
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dG10
|
10 mM MgCl2
|
1736306
|
Table
| 1.666667
|
Hammerhead
| null | null | null | null | 0.000308
|
mM
| 0.000667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FG10
|
10 mM MgCl2
|
1736306
|
Table
| 3.333333
|
Hammerhead
| null | null | null | null | 0.000153
|
mM
| 0.013333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-NG10
|
10 mM MgCl2
|
1736306
|
Table
| 20
|
Hammerhead
| null | null | null | null | 0.000051
|
mM
| 0.000083
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dG13
|
10 mM MgCl2
|
1736306
|
Table
| 1.666667
|
Hammerhead
| null | null | null | null | 0.000227
|
mM
| 0.000133
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FG13
|
10 mM MgCl2
|
1736306
|
Table
| 0.666667
|
Hammerhead
| null | null | null | null | 0.00019
|
mM
| 0.002667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-NG13
|
10 mM MgCl2
|
1736306
|
Table
| 13.333333
|
Hammerhead
| null | null | null | null | 0.000158
|
mM
| 0.054833
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dG19
|
10 mM MgCl2
|
1736306
|
Table
| 346.666667
|
Hammerhead
| null | null | null | null | 0.000176
|
mM
| 0.046667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FG19
|
10 mM MgCl2
|
1736306
|
Table
| 265
|
Hammerhead
| null | null | null | null | 0.000095
|
mM
| 0.020167
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-NG19
|
10 mM MgCl2
|
1736306
|
Table
| 211.666667
|
Hammerhead
| null | null | null | null | 0.000087
|
mM
| 0.021667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dG24
|
10 mM MgCl2
|
1736306
|
Table
| 248.333333
|
Hammerhead
| null | null | null | null | 0.000116
|
mM
| 0.046667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FG24
|
10 mM MgCl2
|
1736306
|
Table
| 400
|
Hammerhead
| null | null | null | null | 0.000066
|
mM
| 0.013833
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-NG24
|
10 mM MgCl2
|
1736306
|
Table
| 210
|
Hammerhead
| null | null | null | null | 0.000242
|
mM
| 0.079667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dG27
|
10 mM MgCl2
|
1736306
|
Table
| 330
|
Hammerhead
| null | null | null | null | 0.00021
|
mM
| 0.005
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FG27
|
10 mM MgCl2
|
1736306
|
Table
| 23.333333
|
Hammerhead
| null | null | null | null | 0.000136
|
mM
| 0.015333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-NG27
|
10 mM MgCl2
|
1736306
|
Table
| 113.333333
|
NS83
| null |
YOKS501
| null | null | 0.000025
|
mM
| 0.00055
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.6
| null |
12 mM MgCl2, 2 mM spermidine
|
1762907
|
Table
| 22
|
NS80
| null |
YOKS403
| null | null | 0.000023
|
mM
| 0.000133
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.6
| null |
12 mM MgCl2, 2 mM spermidine
|
1762907
|
Table
| 5.5
|
(-)sTRSV
| null | null | null | null | 0.00003
|
mM
| 0.035
|
s^-1
|
mM^-1s^-1
| null | null | null | null |
WT
| null |
1762907
|
Table
| 1,166.666667
|
Hammerhead
| null | null | null | null | 0.00062
|
mM
| 0.008333
|
s^-1
|
mM^-1s^-1
| null | null |
55°C
| null | null | null |
1762907
|
Multisource
| 13.5
|
Hammerhead Ribozyme
| null | null | null | null | 0.00022
|
mM
| 0.683333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E_unmodified
|
Mn^2+
|
1911762
|
Table
| 3,100
|
Hammerhead Ribozyme
| null | null | null | null | 0.000217
|
mM
| 0.046667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E_unmodified
|
Mg^2+
|
1911762
|
Table
| 216.666667
|
Hammerhead Ribozyme
| null | null | null | null | 0.000276
|
mM
| 0.003333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FA_total
|
Mn^2+
|
1911762
|
Table
| 16.666667
|
Hammerhead Ribozyme
| null | null | null | null | 0.000107
|
mM
| 0.011667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FA_22,28-30
|
Mn^2+
|
1911762
|
Table
| 116.666667
|
Hammerhead Ribozyme
| null | null | null | null | 0.000187
|
mM
| 0.166667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FA_11,14
|
Mn^2+
|
1911762
|
Table
| 883.333333
|
Hammerhead Ribozyme
| null | null | null | null | 0.000269
|
mM
| 0.633333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FA_14
|
Mn^2+
|
1911762
|
Table
| 2,333.333333
|
Hammerhead Ribozyme
| null | null | null | null | 0.000321
|
mM
| 0.066667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FA_14
|
Mg^2+
|
1911762
|
Table
| 200
|
Hammerhead Ribozyme
| null | null | null | null | 0.000243
|
mM
| 0.366667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FA_28
|
Mn^2+
|
1911762
|
Table
| 1,500
|
Hammerhead Ribozyme
| null | null | null | null | 0.000187
|
mM
| 0.266667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FA_29
|
Mn^2+
|
1911762
|
Table
| 1,433.333333
|
Hammerhead Ribozyme
| null | null | null | null | 0.000091
|
mM
| 0.066667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-FA_30
|
Mn^2+
|
1911762
|
Table
| 733.333333
|
Hammerhead Ribozyme
| null | null | null | null | 0.000157
|
mM
| 0.01
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dA_total
|
Mn^2+
|
1911762
|
Table
| 66.666667
|
Hammerhead Ribozyme
| null | null | null | null | 0.000133
|
mM
| 0.133333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dA_11,14
|
Mn^2+
|
1911762
|
Table
| 950
|
Hammerhead Ribozyme
| null | null | null | null | 0.000264
|
mM
| 0.35
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dA_14
|
Mn^2+
|
1911762
|
Table
| 1,316.666667
|
Hammerhead Ribozyme
| null | null | null | null | 0.000168
|
mM
| 0.233333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dA_28
|
Mn^2+
|
1911762
|
Table
| 1,433.333333
|
Hammerhead Ribozyme
| null | null | null | null | 0.000179
|
mM
| 0.333333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dA_29
|
Mn^2+
|
1911762
|
Table
| 1,900
|
Hammerhead Ribozyme
| null | null | null | null | 0.000058
|
mM
| 0.083333
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E-dA_30
|
Mn^2+
|
1911762
|
Table
| 1,483.333333
|
Hammerhead Ribozyme
| null | null | null | null | 0.000178
|
mM
| 0.366667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E2_unmodified
|
Mn^2+
|
1911762
|
Table
| 2,000
|
Hammerhead Ribozyme
| null | null | null | null | 0.000184
|
mM
| 0.416667
|
s^-1
|
mM^-1s^-1
| null | null |
25°C
|
7.5
|
E2-FA_20-22
|
Mn^2+
|
1911762
|
Table
| 2,266.666667
|
Hammerhead
| null |
S
| null | null | 0.0013
|
mM
| 0.008333
|
s^-1
| null | null | null |
50°C
|
8.5
|
WT
|
20 mM MgCl2, S concentration 0.05-0.6 µM
|
2646593
|
Table
| null |
Hammerhead
| null |
S
| null | null | 0.00063
|
mM
| 0.008333
|
s^-1
| null | null | null |
50°C
|
8.5
|
WT
|
20 mM MgCl2
|
2646593
|
Table
| null |
Hammerhead
| null |
S
| null | null | 0.0075
|
mM
| null | null | null | null | null |
50°C
|
8.5
|
WT
|
20 mM MgCl2, S concentration >0.6 µM
|
2646593
|
Text
| null |
Tetrahymena IVS
| null |
32P-labeled RNA
| null | null | 0.025
|
mM
| 0.013333
|
s^-1
|
mM^-1s^-1
| null | null |
30°C
|
7.5
|
WT
|
200 mM NaCl, 6 mM MgCl2
|
2684642
|
Multisource
| 0.533333
|
Tetrahymena IVS
| null |
32P-labeled RNA
| null | null | 0.041
|
mM
| 0.0045
|
s^-1
|
mM^-1s^-1
| null | null |
30°C
|
7.5
|
C109G
|
200 mM NaCl, 6 mM MgCl2
|
2684642
|
Multisource
| 0.11
|
Tetrahymena IVS
| null |
32P-labeled RNA
| null | null | 0.12
|
mM
| 0.00012
|
s^-1
|
mM^-1s^-1
| null | null |
30°C
|
7.5
|
G212C
|
200 mM NaCl, 6 mM MgCl2
|
2684642
|
Multisource
| 0.001
|
Tetrahymena IVS
| null |
32P-labeled RNA
| null | null | null | null | null | null | null | null | null |
30°C
|
7.5
|
C109G:G212C
|
200 mM NaCl, 6 mM MgCl2
|
2684642
|
Table
| null |
Tetrahymena IVS
| null |
32P-labeled RNA
| null | null | null | null | null | null | null | null | null |
30°C
|
7.5
|
G212A
|
200 mM NaCl, 6 mM MgCl2
|
2684642
|
Table
| null |
Tetrahymena IVS
| null |
32P-labeled RNA
| null | null | null | null | null | null | null | null | null |
30°C
|
7.5
|
C211G
|
200 mM NaCl, 6 mM MgCl2
|
2684642
|
Table
| null |
Tetrahymena IVS
| null |
32P-labeled RNA
| null | null | null | null | null | null | null | null | null |
30°C
|
7.5
|
∆A210
|
200 mM NaCl, 6 mM MgCl2
|
2684642
|
Table
| null |
Tetrahymena IVS
| null |
32P-labeled RNA
| null | null | null | null | null | null | null | null | null |
30°C
|
7.5
|
C109G:C211G
|
200 mM NaCl, 6 mM MgCl2
|
2684642
|
Table
| null |
Tetrahymena ribozyme
| null |
32P-labeled RNA
| null | null | null | null | null | null | null | null | null |
42°C
|
7.5
|
G212C
|
200 mM NaCl, 10 mM MgCl2
|
2684642
|
Text
| null |
Hammerhead
| null | null | null | null | 0.0008
|
mM
| 0.004833
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.9
|
WT
|
10 mM Mg^2+
|
7487885
|
Table
| 6
|
Hammerhead
| null | null | null | null | 0.0005
|
mM
| 0.000667
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.9
|
^4H^C_3
|
10 mM Mg^2+
|
7487885
|
Table
| 1.333333
|
Hammerhead
| null | null | null | null | 0.0025
|
mM
| 0.000767
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.9
|
^4H^C_4
|
10 mM Mg^2+
|
7487885
|
Table
| 0.316667
|
Hammerhead
| null | null | null | null | 0.0007
|
mM
| 0.0016
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.9
|
^4S^U_4
|
10 mM Mg^2+
|
7487885
|
Table
| 2.333333
|
Hammerhead
| null | null | null | null | 0.0007
|
mM
| 0.003333
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.9
|
^4H^C_7
|
10 mM Mg^2+
|
7487885
|
Table
| 4.5
|
Hammerhead
| null | null | null | null | 0.001
|
mM
| 0.003167
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.9
|
^4S^U_16.1
|
10 mM Mg^2+
|
7487885
|
Table
| 3.166667
|
Hammerhead
| null | null | null | null | 0.0023
|
mM
| 0.001383
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.9
|
^4H^C_17
|
10 mM Mg^2+
|
7487885
|
Table
| 0.616667
|
Hairpin
| null |
sTRSV-C8A
| null | null | 0.0025
|
mM
| 0.000633
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUA
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 0.333333
|
Hairpin
| null |
sTRSV
| null | null | 0.000096
|
mM
| 0.006
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUC
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 60
|
Hairpin
| null |
sTRSV-C8G
| null | null | 0.00054
|
mM
| 0.000167
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUG
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 0.333333
|
Hairpin
| null |
sTRSV-C8U
| null | null | 0.00039
|
mM
| 0.00075
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUU
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 2
|
Hairpin
| null |
sCYMV1
| null | null | 0.0004
|
mM
| 0.005333
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUA
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 13.333333
|
Hairpin
| null |
sCYMV1-A8C
| null | null | 0.0015
|
mM
| 0.002333
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUC
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 1.5
|
Hairpin
| null |
sCYMV1-A8G
| null | null | null | null | null | null | null | null | null |
37°C
|
7.5
|
GUG
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| null |
Hairpin
| null |
sCYMV1-A8U
| null | null | null | null | null | null | null | null | null |
37°C
|
7.5
|
GUU
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| null |
Hairpin
| null |
sArMV
| null | null | 0.0014
|
mM
| 0.003167
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUA
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 2.333333
|
Hairpin
| null |
sArMV-A1C
| null | null | 0.00088
|
mM
| 0.004333
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUA
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 5
|
Hairpin
| null |
sArMV-A1C-A8C
| null | null | 0.0054
|
mM
| 0.003667
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUC
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 0.666667
|
Hairpin
| null |
sArMV-A1C-A8G
| null | null | 0.0017
|
mM
| 0.004333
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUG
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 2.5
|
Hairpin
| null |
sArMV-A1C-A8U
| null | null | 0.003
|
mM
| 0.006667
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUU
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 2.166667
|
Hairpin
| null |
sArMV
| null | null | 0.0026
|
mM
| 0.004833
|
s^-1
|
mM^-1s^-1
| null | null |
37°C
|
7.5
|
GUA
|
12 mM MgCl2, 2 mM spermidine
|
7495810
|
Table
| 1.833333
|
R32
| null |
all-RNA substrat
| null | null | null | null | null | null | null | null | null |
37°C
|
7
|
WT
|
25 mM CoCl2
|
7506830
|
Table
| null |
DRD32
| null |
all-RNA substrat
| null | null | null | null | null | null | null | null | null |
37°C
|
7
|
Chimeric DNA/RNA
|
25 mM CoCl2
|
7506830
|
Table
| null |
R32
| null |
all-RNA substrat
| null | null | null | null | null | null | null | null | null |
37°C
|
7
|
WT
|
25 mM MgCl2
|
7506830
|
Table
| null |
DRD32
| null |
all-RNA substrat
| null | null | null | null | null | null | null | null | null |
37°C
|
7
|
Chimeric DNA/RNA
|
25 mM MgCl2
|
7506830
|
Table
| null |
R32
| null |
all-RNA substrat
| null | null | null | null | null | null | null | null | null |
37°C
|
7
|
WT
|
25 mM MgSO4
|
7506830
|
Table
| null |
End of preview.