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cd(datadir);
filz=dir(['*_3AOB_TFandERPs_V.mat']);
Nsubjs=length(filz);
% Load BigAgg_Data
load('Z:\EXPERIMENTS\mTBICoBRE\MANUSCRIPT 3AOB\BigAgg_Data.mat');
% Preallocate
IDENTITY.DEMO=NaN(Nsubjs,7);
IDENTITY.TBI=NaN(Nsubjs,9);
IDENTITY.NP=NaN(Nsubjs,8);
IDENTITY.QUEX=NaN(Nsubjs,25);
% ^^^^^^^^^^
MEGA_PWR=NaN(Nsubjs,3,50,751,3);
MEGA_PHS=NaN(Nsubjs,3,50,751,3);
MEGA_SYNCH=NaN(Nsubjs,3,50,751,3);
MEGA_SYNCH_TOPO=NaN(Nsubjs,60,751,3);
MEGA_POWER_TOPO=NaN(Nsubjs,60,751,3);
MEGA_CORREL_TOPO=NaN(Nsubjs,60,751,3);
MEGA_ERP=NaN(Nsubjs,60,751,3);
MEGA_TRL_ct=NaN(Nsubjs,3);
for si=1:Nsubjs
subno = str2double(filz(si).name(1:end-23)) ; % B/C some Quinn ones have 5 digit IDs, some 4
session = str2double(filz(si).name(end-21)) ;
if subno<3500 % Cavanagh
if mod(subno,2)==1, group=1; % ODD - Ctl
elseif mod(subno,2)==0,group=2; % EVEN - mTBI
end
else % Quinn
group=3; % Chronic TBI (cTBI)
end
IDENTITY_DEMO_HDR{1}={'subno'}; IDENTITY_DEMO_HDR{2}='session'; IDENTITY_DEMO_HDR{3}='group';
IDENTITY_TBI_HDR{1}={'subno'}; IDENTITY_TBI_HDR{2}='session'; IDENTITY_TBI_HDR{3}='group';
IDENTITY_NP_HDR{1}={'subno'}; IDENTITY_NP_HDR{2}='session'; IDENTITY_NP_HDR{3}='group';
IDENTITY_QUEX_HDR{1}={'subno'}; IDENTITY_QUEX_HDR{2}='session'; IDENTITY_QUEX_HDR{3}='group';
IDENTITY.DEMO(si,1:3)=[subno,session,group];
IDENTITY.TBI(si,1:3)=[subno,session,group];
IDENTITY.NP(si,1:3)=[subno,session,group];
IDENTITY.QUEX(si,1:3)=[subno,session,group];
% --------------- QUEX
if group<3 % Cavanagh data
if any(DEMO.ID(:,1)==subno)
bigagg_idx=find(DEMO.ID(:,1)==subno);
IDENTITY.DEMO(si,4)=DEMO.URSI(bigagg_idx,1); IDENTITY_DEMO_HDR{4}='URSI';
IDENTITY.DEMO(si,5)=DEMO.Sex_F1(bigagg_idx); IDENTITY_DEMO_HDR{5}='SexF1';
IDENTITY.DEMO(si,6)=DEMO.Age(bigagg_idx); IDENTITY_DEMO_HDR{6}='Age';
IDENTITY.DEMO(si,7)=DEMO.SES(bigagg_idx); IDENTITY_DEMO_HDR{7}='YrsEd'; % That's what this actually is.
if session==1
IDENTITY.TBI(si,4)=TBIfields.Glasgow(bigagg_idx); IDENTITY_TBI_HDR{4}='GCS';
IDENTITY.TBI(si,5)=TBIfields.LOC(bigagg_idx); IDENTITY_TBI_HDR{5}='LOC';
IDENTITY.TBI(si,6)=TBIfields.LOCtime(bigagg_idx); IDENTITY_TBI_HDR{6}='LOCtime';
IDENTITY.TBI(si,7)=TBIfields.LOM(bigagg_idx); IDENTITY_TBI_HDR{7}='LOM';
IDENTITY.TBI(si,8)=TBIfields.DaysSinceInjury(bigagg_idx); IDENTITY_TBI_HDR{8}='Days';
% ---------------------
IDENTITY.NP(si,4)=NP.TOPF_Score(bigagg_idx); IDENTITY_NP_HDR{4}='TOPF';
IDENTITY.NP(si,5)=NP.Coding(bigagg_idx); IDENTITY_NP_HDR{5}='Coding';
IDENTITY.NP(si,6)=NP.SPAN.Tot(bigagg_idx); IDENTITY_NP_HDR{6}='Span';
IDENTITY.NP(si,7)=mean([NP.HVLT.T1(bigagg_idx),NP.HVLT.T2(bigagg_idx),NP.HVLT.T3(bigagg_idx)]'); IDENTITY_NP_HDR{7}='HVLT13';
IDENTITY.NP(si,8)=NP.HVLT.DelayRecall(bigagg_idx); IDENTITY_NP_HDR{8}='HVLTdelay';
end
IDENTITY.QUEX(si,4)=QUEX.BDI(bigagg_idx,session); IDENTITY_QUEX_HDR{4}='BDI';
IDENTITY.QUEX(si,5)=QUEX.NSI.tot(bigagg_idx,session); IDENTITY_QUEX_HDR{5}='NSItot';
IDENTITY.QUEX(si,6)=QUEX.NSI.somatic(bigagg_idx,session); IDENTITY_QUEX_HDR{6}='NSIsom';
IDENTITY.QUEX(si,7)=QUEX.NSI.cog(bigagg_idx,session); IDENTITY_QUEX_HDR{7}='NSIcog';
IDENTITY.QUEX(si,8)=QUEX.NSI.emo(bigagg_idx,session); IDENTITY_QUEX_HDR{8}='NSIemo';
IDENTITY.QUEX(si,9)=QUEX.FRSBE.Tot_B4(bigagg_idx,session); IDENTITY_QUEX_HDR{9}='F_Tot_B4';
IDENTITY.QUEX(si,10)=QUEX.FRSBE.Tot_Now(bigagg_idx,session); IDENTITY_QUEX_HDR{10}='F_Tot';
IDENTITY.QUEX(si,11)=EX.EX(bigagg_idx,session); IDENTITY_QUEX_HDR{11}='EX_EX';
IDENTITY.QUEX(si,12)=EX.CC(bigagg_idx,session); IDENTITY_QUEX_HDR{12}='EX_CC';
IDENTITY.QUEX(si,13)=EX.FL(bigagg_idx,session); IDENTITY_QUEX_HDR{13}='EX_FL';
IDENTITY.QUEX(si,14)=EX.WM(bigagg_idx,session); IDENTITY_QUEX_HDR{14}='EX_WM';
end
elseif group==3
if any(Q_DEMO.URSI==subno)
bigagg_idx=find(Q_DEMO.URSI==subno);
%^^^^^^^^^^^
IDENTITY.DEMO(si,4)=Q_DEMO.URSI(bigagg_idx,1);
IDENTITY.DEMO(si,5)=Q_DEMO.Sex_F1(bigagg_idx);
IDENTITY.DEMO(si,6)=Q_DEMO.Age(bigagg_idx);
IDENTITY.DEMO(si,7)=Q_DEMO.SES(bigagg_idx);
% ---------------------
IDENTITY.TBI(si,6)=Q_TBIfields.LOCdurMINS(bigagg_idx);
IDENTITY.TBI(si,9)=Q_TBIfields.YearsSinceInjury(bigagg_idx); IDENTITY_TBI_HDR{9}='Years';
% ---------------------
IDENTITY.NP(si,4)=Q_NP.TOPF_Score(bigagg_idx);
IDENTITY.NP(si,5)=Q_NP.Coding(bigagg_idx);
IDENTITY.NP(si,6)=Q_NP.SPAN.Tot(bigagg_idx);
IDENTITY.NP(si,7)=mean([Q_NP.HVLT.T1(bigagg_idx),Q_NP.HVLT.T2(bigagg_idx),Q_NP.HVLT.T3(bigagg_idx)]');
IDENTITY.NP(si,8)=Q_NP.HVLT.DelayRecall(bigagg_idx);
% ---------------------
IDENTITY.QUEX(si,4)=Q_QUEX.BDI(bigagg_idx);
IDENTITY.QUEX(si,5)=Q_QUEX.NSI.tot(bigagg_idx);
IDENTITY.QUEX(si,6)=Q_QUEX.NSI.somatic(bigagg_idx);
IDENTITY.QUEX(si,7)=Q_QUEX.NSI.cog(bigagg_idx);
IDENTITY.QUEX(si,8)=Q_QUEX.NSI.emo(bigagg_idx);
IDENTITY.QUEX(si,9)=Q_QUEX.FRSBE.RAW_Tot_Now(bigagg_idx);
IDENTITY.QUEX(si,10)=Q_QUEX.FRSBE.Tot_Now(bigagg_idx);
end
end
clear bigagg_idx
% EEG
load([filz(si).name(1:end-5),'V.mat'],'ERP','TRL_ct');
MEGA_ERP(si,:,:,:)=ERP;
MEGA_TRL_ct(si,:)=TRL_ct;
clear ERP ISPC ITPC POWER VECTOR RT SYNCH_TOPO TRL_ct subno session group BEH ACC RT POWER_TOPO CORREL_TOPO;
end
clear DEMO QUEX NP EX TBIfields Q_*
cd(homedir);
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