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%% PD OFF and Control: Time-Frequnecy analysis
%% ####################### Cue-locled ON-OFF #############################
clear ;
clc;
close all;
savedir='D:\Project_EEG_CC\CC_Results_step2_AllChannels_NEW\';
cd(savedir);
load('D:\Project_EEG_CC\mFiles\ONOFF.mat','ONOFF')
load('D:\Project_EEG_CC\mFiles\BV_Chanlocs_60.mat');
PDsx=[801:811,813:829];
CTLsx=[8010,8070,8060,890:914];
BigN=size(ONOFF,1)./2;
% load PD OFF and ON data
row=1;
for mi=1:size(ONOFF,1)
disp([num2str(ONOFF(mi,1)),'_Session_',num2str(ONOFF(mi,2)),'_PDDys_CC_ALL_GOODS.mat']);
if ONOFF(mi,1)==824 && ONOFF(mi,2)==2 % Bad EEG
POWER=NaN(size_power);
else
load([savedir,num2str(ONOFF(mi,1)),'_Session_',num2str(ONOFF(mi,2)),'_PDDys_CC_ALL_GOODS.mat']);
size_power=size(POWER);
end
if ONOFF(mi,3)==1 % ON
ON.ID(floor(row))=ONOFF(mi,1);
ON.Session(floor(row))=ONOFF(mi,2);
ON.POWER{1}(floor(row),:,:,:,:,:)=POWER;
elseif ONOFF(mi,3)==0 % OFF
OFF.ID(floor(row))=ONOFF(mi,1);
OFF.Session(floor(row))=ONOFF(mi,2);
OFF.POWER{1}(floor(row),:,:,:,:,:)=POWER;
end
row=row+.5;
clear POWER;
end
% load control data
row=1;
for CTLi=CTLsx;
disp([num2str(CTLi),'_Session_1_PDDys_CC_ALL_GOODS.mat']);
if ONOFF(mi,1)==911 && ONOFF(mi,2)==1 % Bad EEG
POWER=NaN(size_power);
else
load([savedir,num2str(CTLi),'_Session_1_PDDys_CC_ALL_GOODS.mat']);
end
CTL.ID(floor(row))=CTLi;
CTL.Session(floor(row))=1;
CTL.POWER{1}(floor(row),:,:,:,:,:)=POWER;
row=row+1;
clear POWER ;
end
CtlN=row-1;
%% ################## Cue-Locked Cong and Incong: CTL - OFF ######################################
paneli = 1; % Cue
tx2disp=-500:2:1000;
frex=logspace(.01,1.7,50);
Bidx=1; % 1 is pre-cue baseline
CHANI=21; % channel 21 Cz
%%%%%%%%%%%%%%%%%%%%%%%%% %%% figure for PD OFF/ON - Control
OFF_Conf2 = OFF.POWER{Bidx}(:,CHANI,:,:,2,paneli); OFF_Conf1 = OFF.POWER{Bidx}(:,CHANI,:,:,1,paneli);
CTL_Conf2 = CTL.POWER{Bidx}(:,CHANI,:,:,2,paneli); CTL_Conf1 = CTL.POWER{Bidx}(:,CHANI,:,:,1,paneli);
OFF_Conf21 = squeeze( nanmean(OFF_Conf2,1)) - squeeze( nanmean(OFF_Conf1,1));
CTL_Conf21 = squeeze( nanmean(CTL_Conf2,1)) - squeeze( nanmean(CTL_Conf1,1));
subplot(411);
imagesc(tx2disp,[], CTL_Conf21 - OFF_Conf21); axis xy; hold on; colormap jet
[Corrected_P] = Run_Thresh_2D(squeeze(CTL_Conf2)- squeeze(CTL_Conf1), squeeze(OFF_Conf2)- squeeze(OFF_Conf1), 'between') ;
contour(tx2disp,1:50,Corrected_P,'k','linewidth',2); clear Corrected_P ;
rectangle('Position',[400 18 100 9],'EdgeColor','b','LineWidth', 3)
plot([0 0],[1 50],'k:')
set(gca,'clim',[-1 1],'xlim',[-500,1000],'ylim',[1 50],'YTick',1:4:length(frex),'YTickLabel',round(frex(1:4:end)));hold off; title('Cue-locked CTL-OFF (Incong-Cong)');
%% ################## Response Locked Correct and Error: CTL - OFF ######################################
clearvars -except OFF ON CTL
paneli = 2;
tx2disp=-500:2:1000;
frex=logspace(.01,1.7,50);
Bidx=1; % 1 is pre-cue baseline
CHANI=21; % channel 21 Cz
%%%%%%%%%%%%%%%%%%%%%%%%% %%% figure for PD OFF/ON - Control
OFF_Conf2 = OFF.POWER{Bidx}(:,CHANI,:,:,2,paneli); OFF_Conf1 = OFF.POWER{Bidx}(:,CHANI,:,:,1,paneli);
CTL_Conf2 = CTL.POWER{Bidx}(:,CHANI,:,:,2,paneli); CTL_Conf1 = CTL.POWER{Bidx}(:,CHANI,:,:,1,paneli);
OFF_Conf21 = squeeze( nanmean(OFF_Conf2,1)) - squeeze( nanmean(OFF_Conf1,1));
CTL_Conf21 = squeeze( nanmean(CTL_Conf2,1)) - squeeze( nanmean(CTL_Conf1,1));
subplot(412);
imagesc(tx2disp,[], CTL_Conf21 - OFF_Conf21); axis xy; hold on; colormap jet
[Corrected_P] = Run_Thresh_2D(squeeze(CTL_Conf2)- squeeze(CTL_Conf1), squeeze(OFF_Conf2)- squeeze(OFF_Conf1), 'between') ;
contour(tx2disp,1:50,Corrected_P,'k','linewidth',2); clear Corrected_P ;
rectangle('Position',[-200 18 250 9],'EdgeColor','b','LineWidth', 3);
plot([0 0],[1 50],'k:')
set(gca,'clim',[-1 1],'xlim',[-500,1000],'ylim',[1 50],'YTick',1:4:length(frex),'YTickLabel',round(frex(1:4:end)));hold off; title('Resp-locked CTL-OFF (Error-Correct)');
%% CORRECT ONLT: Resp locked: Cong and Incong
clear;clc;
savedir='D:\Project_EEG_CC\CC_Results_step2_CORRECT_NEW\';
cd(savedir);
load('D:\Project_EEG_CC\mFiles\ONOFF.mat','ONOFF')
load('D:\Project_EEG_CC\mFiles\BV_Chanlocs_60.mat');
PDsx=[801:811,813:829];
CTLsx=[8010,8070,8060,890:914];
BigN=size(ONOFF,1)./2;
% load PD OFF and ON data
row=1;
for mi=1:size(ONOFF,1)
disp([num2str(ONOFF(mi,1)),'_Session_',num2str(ONOFF(mi,2)),'_PDDys_CC_ALL_GOODS.mat']);
if ONOFF(mi,1)==824 && ONOFF(mi,2)==2 % Bad EEG
POWER=NaN(size_power);
else
load([savedir,num2str(ONOFF(mi,1)),'_Session_',num2str(ONOFF(mi,2)),'_PDDys_CC_ALL_GOODS.mat']);
size_power=size(POWER);
end
if ONOFF(mi,3)==1 % ON
ON.ID(floor(row))=ONOFF(mi,1);
ON.Session(floor(row))=ONOFF(mi,2);
ON.POWER{1}(floor(row),:,:,:,:,:)=POWER;
elseif ONOFF(mi,3)==0 % OFF
OFF.ID(floor(row))=ONOFF(mi,1);
OFF.Session(floor(row))=ONOFF(mi,2);
OFF.POWER{1}(floor(row),:,:,:,:,:)=POWER;
end
row=row+.5;
clear Model_Output POWER ;
end
% load control data
row=1;
for CTLi=CTLsx;
disp([num2str(CTLi),'_Session_1_PDDys_CC_ALL_GOODS.mat']);
if ONOFF(mi,1)==911 && ONOFF(mi,2)==1 % Bad EEG
ERPs=NaN(size_erp);POWER=NaN(size_power); POWER_REST=NaN(size_power); Baselines=NaN(60,50,2);
else
load([savedir,num2str(CTLi),'_Session_1_PDDys_CC_ALL_GOODS.mat']);
end
CTL.ID(floor(row))=CTLi;
CTL.Session(floor(row))=1;
CTL.POWER{1}(floor(row),:,:,:,:,:)=POWER;
row=row+1;
clear Model_Output POWER ;
end
CtlN=row-1;
tx2disp=-500:2:1000;
frex=logspace(.01,1.7,50);
CHANS=(1:60);
Bidx=1; % 1 is pre-cue baseline
CHANI=21; % channel Cz
%%%%%%%%%%%%%%%%%%%%%%%%% %%% figure for PD ON - Control
CTL_Conf2 = CTL.POWER{Bidx}(:,CHANI,:,:,2); CTL_Conf1 = CTL.POWER{Bidx}(:,CHANI,:,:,1);
OFF_Conf2 = OFF.POWER{Bidx}(:,CHANI,:,:,2); OFF_Conf1 = OFF.POWER{Bidx}(:,CHANI,:,:,1);
CTL_Conf21 = squeeze( nanmean(CTL_Conf2,1)) - squeeze( nanmean(CTL_Conf1,1));
PD_OFF_Conf21 = squeeze( nanmean(OFF_Conf2,1)) - squeeze( nanmean(OFF_Conf1,1));
subplot(413);
imagesc(tx2disp,[], CTL_Conf21 - PD_OFF_Conf21); axis xy; hold on; colormap jet
[Corrected_P] = Run_Thresh_2D(squeeze(OFF_Conf2)- squeeze(OFF_Conf1), squeeze(CTL_Conf2)- squeeze(CTL_Conf1), 'between') ;
contour(tx2disp,1:50,Corrected_P,'k','linewidth',2); clear Corrected_P;
plot([0 0],[1 50],'k:')
% plot ROI in Green Color
rectangle('Position',[-200 18 250 9],'EdgeColor','b','LineWidth', 3)
set(gca,'clim',[-1 1],'xlim',[-500,1000],'ylim',[1 50],'YTick',1:4:length(frex),'YTickLabel',round(frex(1:4:end)));hold off; title('Resp-locked CTL-OFF (Incong-Cong)');
%% ################## Post Error- Post Correct: CTL-OFF ###################################################
clear; clc;
%%%% get the data
savedir='D:\Project_EEG_CC\CC_Project_PostError\PostError_step2_Data_NEW\'; % Main Data are here
cd(savedir);
load('D:\Project_EEG_CC\CC_Project_PostError\ONOFF.mat','ONOFF')
load('D:\Project_EEG_CC\CC_Project_PostError\BV_Chanlocs_60.mat');
PDsx=[801:811,813:829];
CTLsx=[8010,8070,8060,890:914];
BigN=size(ONOFF,1)./2;
% load PD OFF and ON data
row=1;
for mi=1:size(ONOFF,1)
disp([num2str(ONOFF(mi,1)),'_Session_',num2str(ONOFF(mi,2)),'_PDDys_CC_ALL_GOODS.mat']);
if ONOFF(mi,1)==824 && ONOFF(mi,2)==2 % Bad EEG
POWER=NaN(size_power);
else
load([savedir,num2str(ONOFF(mi,1)),'_Session_',num2str(ONOFF(mi,2)),'_PDDys_CC_ALL_GOODS.mat']);
size_power=size(POWER);
end
if ONOFF(mi,3)==1 % ON
ON.ID(floor(row))=ONOFF(mi,1);
ON.Session(floor(row))=ONOFF(mi,2);
ON.POWER{1}(floor(row),:,:,:,:,:)=POWER;
elseif ONOFF(mi,3)==0 % OFF
OFF.ID(floor(row))=ONOFF(mi,1);
OFF.Session(floor(row))=ONOFF(mi,2);
OFF.POWER{1}(floor(row),:,:,:,:,:)=POWER;
end
row=row+.5;
clear Model_Output POWER ;
end
% load control data
row=1;
for CTLi=CTLsx;
disp([num2str(CTLi),'_Session_1_PDDys_CC_ALL_GOODS.mat']);
if ONOFF(mi,1)==911 && ONOFF(mi,2)==1 % Bad EEG
VECTOR=NaN; POWER=NaN(size_power); POWER_REST=NaN(size_power); Baselines=NaN(60,50,2);
else
load([savedir,num2str(CTLi),'_Session_1_PDDys_CC_ALL_GOODS.mat']);
end
CTL.ID(floor(row))=CTLi;
CTL.Session(floor(row))=1;
CTL.POWER{1}(floor(row),:,:,:,:,:)=POWER;
row=row+1;
clear POWER ;
end
CtlN=row-1;
tx2disp=-500:2:1000;
frex=logspace(.01,1.7,50);
Bidx=1; % 1 is pre-cue baseline | 2 is rest baseline
CHANI=21;
EVENT=2; % RESP
% ############################## Time-Frequnecy ###############################################
%%%%%%%%%%%%%%%%%%%%%%%%% %%% figure for PD OFF/ON
CTL_PC = CTL.POWER{Bidx}(:,CHANI,:,:, 1,EVENT); CTL_PE = CTL.POWER{Bidx}(:,CHANI,:,:,2,EVENT);
OFF_PC = OFF.POWER{Bidx}(:,CHANI,:,:, 1,EVENT); OFF_PE = OFF.POWER{Bidx}(:,CHANI,:,:,2,EVENT);
CTL_PEC = squeeze( nanmean(CTL_PE, 1)) - squeeze( nanmean(CTL_PC,1));
OFF_PEC = squeeze( nanmean(OFF_PE, 1)) - squeeze( nanmean(OFF_PC,1));
subplot(414);
imagesc(tx2disp,[], (CTL_PEC-OFF_PEC)); axis xy; hold on; colormap jet
[Corrected_P] = Run_Thresh_2D(squeeze(CTL_PE)- squeeze(CTL_PC), squeeze(OFF_PE)- squeeze(OFF_PC), 'between') ;
contour(tx2disp,1:50,Corrected_P,'k','linewidth',2); clear Corrected_P ;
rectangle('Position',[-200 18 250 9],'EdgeColor','b','LineWidth', 3);
plot([0 0],[1 50],'k:')
set(gca,'clim',[-1 1],'xlim',[-500,1000],'ylim',[1 50],'YTick',1:4:length(frex),'YTickLabel',round(frex(1:4:end)));hold off; title ('Resp-locked CTL-OFF:PostError-PostCorrect');
suptitle('CTL - OFF');
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