%% ERPs
clear ; 
clc;
close all;
savedir='D:\Project_EEG_CC\CC_Results_step2_AllChannels_NEW\'; 
cd(savedir);

load('D:\Project_EEG_CC\mFiles\ONOFF.mat','ONOFF')
load('D:\Project_EEG_CC\mFiles\BV_Chanlocs_60.mat');

PDsx=[801:811,813:829];        
CTLsx=[8010,8070,8060,890:914]; 

BigN=size(ONOFF,1)./2;

% load PD OFF and ON data
row=1;
for mi=1:size(ONOFF,1)

    disp([num2str(ONOFF(mi,1)),'_Session_',num2str(ONOFF(mi,2)),'_PDDys_CC_ALL_GOODS.mat']);
    
    if ONOFF(mi,1)==824 && ONOFF(mi,2)==2  % Bad EEG
        VECTOR=NaN;  ERPs=NaN(size_erp);   POWER=NaN(size_power);
    else
        load([savedir,num2str(ONOFF(mi,1)),'_Session_',num2str(ONOFF(mi,2)),'_PDDys_CC_ALL_GOODS.mat']);
        size_erp=size(ERPs);  size_power=size(POWER); 
    end
        
        
    if ONOFF(mi,3)==1 % ON
        ON.ID(floor(row))=ONOFF(mi,1);
        ON.Session(floor(row))=ONOFF(mi,2);
        ON.ERPs(floor(row),:,:,:,:)=ERPs;
        ON.POWER{1}(floor(row),:,:,:,:,:)=POWER;
                
    elseif ONOFF(mi,3)==0 % OFF
        OFF.ID(floor(row))=ONOFF(mi,1);
        OFF.Session(floor(row))=ONOFF(mi,2);
        OFF.ERPs(floor(row),:,:,:,:)=ERPs;
        OFF.POWER{1}(floor(row),:,:,:,:,:)=POWER;
    end
    row=row+.5;
    clear ERPs Model_Output POWER ITPC;
    
end
% load control data
row=1;
for CTLi=CTLsx;
    
    disp([num2str(CTLi),'_Session_1_PDDys_CC_ALL_GOODS.mat']);
    
    if ONOFF(mi,1)==911 && ONOFF(mi,2)==1  % Bad EEG
        VECTOR=NaN;  ERPs=NaN(size_erp);   POWER=NaN(size_power);
    else
        load([savedir,num2str(CTLi),'_Session_1_PDDys_CC_ALL_GOODS.mat']);
    end
    
    CTL.ID(floor(row))=CTLi;
    CTL.Session(floor(row))=1;
    CTL.ERPs(floor(row),:,:,:,:)=ERPs;
    CTL.POWER{1}(floor(row),:,:,:,:,:)=POWER;
    row=row+1;
    clear ERPs Model_Output POWER;
end
CtlN=row-1;

%% % ########################    Response - locked ERPs   #################
tx2disp=-500:2:1000;
CHAN=21; % Cz
paneli = 2; % response

%%%% for Control
subplot(321)
shadedErrorBar2(tx2disp,squeeze(nanmean(CTL.ERPs(:,CHAN,:,1,paneli),1)),squeeze(nanstd(CTL.ERPs(:,CHAN,:,1,paneli),1))./sqrt(28),'lineprops','b');hold on
plot(tx2disp,squeeze(nanmean(CTL.ERPs(:,CHAN,:,1,paneli),1)),'b','linewidth',2); hold on

shadedErrorBar2(tx2disp,squeeze(nanmean(CTL.ERPs(:,CHAN,:,2,paneli),1)),squeeze(nanstd(CTL.ERPs(:,CHAN,:,2,paneli),1))./sqrt(28),'lineprops','c');hold on
plot(tx2disp,squeeze(nanmean(CTL.ERPs(:,CHAN,:,2,paneli),1)),'c','linewidth',2); hold on
plot([0 0],[-5 10],'k:'); title(' Control: Cz');hold off; box off; ylim([-3 8]);

 %%%% for PD ON  
subplot(323)
shadedErrorBar2(tx2disp,squeeze(nanmean(ON.ERPs(:,CHAN,:,1,paneli),1)),squeeze(nanstd(ON.ERPs(:,CHAN,:,1,paneli),1))./sqrt(28),'lineprops','r');hold on
plot(tx2disp,squeeze(nanmean(ON.ERPs(:,CHAN,:,1,paneli),1)),'r','linewidth',2); hold on


shadedErrorBar2(tx2disp,squeeze(nanmean(ON.ERPs(:,CHAN,:,2,paneli),1)),squeeze(nanstd(ON.ERPs(:,CHAN,:,2,paneli),1))./sqrt(28),'lineprops','m');hold on
plot(tx2disp,squeeze(nanmean(ON.ERPs(:,CHAN,:,2,paneli),1)),'m','linewidth',2); hold on
plot([0 0],[-5 10],'k:'); title('PD ON: Cz');hold off; box off; ylim([-3 8]);


% % %    ##################  Time Frequency #####################
tx2disp=-500:2:1000;
frex=logspace(.01,1.7,50);

Bidx=1;   % 1 is pre-cue baseline
CHANI=21;  % Cz 
EVENT=2;  % RESP

%%%%%%%%%%%%%%%%%%%%%%%%% %%% figure for PD OFF/ON - Control

CTL_Conf2 = CTL.POWER{Bidx}(:,CHANI,:,:,2,EVENT);     CTL_Conf1 = CTL.POWER{Bidx}(:,CHANI,:,:,1,EVENT); 
ON_Conf2 =   ON.POWER{Bidx}(:,CHANI,:,:,2,EVENT);     ON_Conf1 =   ON.POWER{Bidx}(:,CHANI,:,:,1,EVENT); 

CTL_Conf12 =    (squeeze( nanmean(CTL_Conf2,1)) + squeeze( nanmean(CTL_Conf1,1)))/2;
PD_ON_Conf12 =  (squeeze( nanmean(ON_Conf2,1)) +  squeeze( nanmean(ON_Conf1,1)))/2;

CTL_Conf21 =    squeeze( nanmean(CTL_Conf2,1)) - squeeze( nanmean(CTL_Conf1,1)); 
PD_ON_Conf21 =  squeeze( nanmean(ON_Conf2,1)) -  squeeze( nanmean(ON_Conf1,1));
   


% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% CONTOL and PD ON %%%%%%%%%%%%%%%%%%%%
  
%%% CTL-PD ON
    subplot(322);
    imagesc( tx2disp,[], (CTL_Conf12) - (PD_ON_Conf12) ); axis xy; hold on; colormap jet
    [Corrected_P] = Run_Thresh_2D( (squeeze(ON_Conf1)+squeeze(ON_Conf2))/2, (squeeze(CTL_Conf1)+ squeeze(CTL_Conf2))/2, 'between') ;
    contour(tx2disp,1:50,Corrected_P,'k','linewidth',2); clear Corrected_P;
    plot([0 0],[1 50],'k:')
    set(gca,'clim',[-2 2],'xlim',[-500,1000],'ylim',[1 50],'YTick',1:4:length(frex),'YTickLabel',round(frex(1:4:end)));title('CTL-ON (Avg of Correct and Error)');hold off; %colorbar; 

    subplot(324);
    imagesc(tx2disp,[], CTL_Conf21 - PD_ON_Conf21); axis xy; hold on; colormap jet
    [Corrected_P] = Run_Thresh_2D( squeeze(ON_Conf2)-squeeze(ON_Conf1), squeeze(CTL_Conf2)- squeeze(CTL_Conf1), 'between') ;
    contour(tx2disp,1:50,Corrected_P,'k','linewidth',2); clear Corrected_P;
    rectangle('Position',[-200 18 250 9],'EdgeColor','b','LineWidth', 3);
    plot([0 0],[1 50],'k:')
    set(gca,'clim',[-2 2],'xlim',[-500,1000],'ylim',[1 50],'YTick',1:4:length(frex),'YTickLabel',round(frex(1:4:end)));hold off; title('CTL-ON (Error-Correct)'); 
   
% % % #######################   TOPO  ######################################

tx1 = find (tx2disp==-200); tx2 = find (tx2disp==50);
% fq1 = min(find(frex>3));   fq2 = min(find(frex>5));
fq1 = min(find(frex>3.8));   fq2 = min(find(frex>7.8));


for n = 1:28
    for Chanl = 1:60
    CTL_PowCg   = CTL.POWER{1}(n,Chanl,(fq1:fq2),(tx1:tx2),1,paneli); ON_PowCg    = ON.POWER{1} (n,Chanl,(fq1:fq2),(tx1:tx2),1,paneli);
    CTL_PowIncg = CTL.POWER{1}(n,Chanl,(fq1:fq2),(tx1:tx2),2,paneli); ON_PowIncg  = ON.POWER{1} (n,Chanl,(fq1:fq2),(tx1:tx2),2,paneli);
    %%%% Incong and Cong ....
    IngPow_CTL = squeeze(nanmean(CTL_PowIncg));         CogPow_CTL = squeeze(nanmean(CTL_PowCg));
    IngPow_ON = squeeze(nanmean(ON_PowIncg));           CogPow_ON = squeeze(nanmean(ON_PowCg));
    IncongCTL(n).chans{Chanl,1} = nanmean(IngPow_CTL);  CongCTL(n).chans{Chanl,1}   = nanmean(CogPow_CTL);
    IncongON(n).chans{Chanl,1} = nanmean(IngPow_ON);    CongON(n).chans{Chanl,1}   = nanmean(CogPow_ON);
    end
end

IncongruentCTL = cell(28,60);CongruentCTL   = cell(28,60);
IncongruentON = cell(28,60);CongruentON   = cell(28,60);

for n = 1:28
    IncongruentCTL(n,:) =  IncongCTL(n).chans ; 
    CongruentCTL(n,:) =  CongCTL(n).chans ; 
    
    IncongruentON(n,:) =  IncongON(n).chans ; 
    CongruentON(n,:) =   CongON(n).chans ; 
       
end

IncongruentCTL = cell2mat(IncongruentCTL); CongruentCTL = cell2mat(CongruentCTL);
IncongruentON = cell2mat(IncongruentON); CongruentON = cell2mat(CongruentON);

chanlocs = BV_Chanlocs_60;

CTL_IncongCong = (IncongruentCTL - CongruentCTL);
ON_IncongCong = (IncongruentON - CongruentON);

% figure
[~,P3,~,~]=ttest2(CTL_IncongCong,ON_IncongCong); P3(P3>=.05)=NaN; P3(P3<.05)=1; P3(isnan(P3))=0; 
subplot(326); topoplot(nanmean(CTL_IncongCong-ON_IncongCong),chanlocs,'maplimits',[-0.5 0.5],'emarker2', {find(P3),'d','k',5,1}); title ('Control-PD');colormap jet; clear P3

suptitle ('Response-locked ERPs-TF-TOPO: Conf2 and Conf1')