"""Download CTO binary outcome labels from HuggingFace. CTO (Clinical Trial Outcome) provides 125K+ trial outcome labels derived via weak supervision (GPT-3.5 + news sentiment + stock prices). Source: Gao et al. 2026 (Nature Health) License: MIT Usage: python scripts_ct/download_cto.py """ from pathlib import Path from negbiodb.download import download_file_http, load_config, verify_file_exists def main(): cfg = load_config() dl = cfg["ct_domain"]["downloads"]["cto"] dest = Path(dl["dest"]) print("=== CTO Outcome Labels Download ===") print(f"Dest: {dest}") download_file_http(dl["url"], dest, desc="CTO outcome labels") if not verify_file_exists(dest, min_bytes=10000): raise ValueError(f"CTO file too small or missing: {dest}") size_mb = dest.stat().st_size / (1024**2) print(f"Downloaded: {dest} ({size_mb:.1f} MB)") print("\nCTO download complete.") if __name__ == "__main__": main()