#!/usr/bin/env python """Download IntAct negative interaction file. Downloads: - intact_negative.txt (PSI-MI TAB 2.7, ~4.9 MB, ~870 negative evidences) License: CC BY 4.0 """ import argparse from pathlib import Path from negbiodb.download import download_file_http, load_config, verify_file_exists _PROJECT_ROOT = Path(__file__).resolve().parent.parent def main(): parser = argparse.ArgumentParser( description="Download IntAct negative interactions" ) parser.add_argument( "--dest", type=str, default=None, help="Destination path (default: from config)" ) args = parser.parse_args() cfg = load_config() intact_cfg = cfg["ppi_domain"]["downloads"]["intact"] dest = Path(args.dest or (_PROJECT_ROOT / intact_cfg["dest"])) download_file_http(intact_cfg["url"], dest, desc="intact_negative.txt") min_bytes = intact_cfg.get("min_size_bytes", 0) if min_bytes and not verify_file_exists(dest, min_bytes): raise RuntimeError( f"Downloaded file too small: {dest.stat().st_size} bytes " f"(expected >= {min_bytes})" ) print(f"\nIntAct negative file: {dest}") if __name__ == "__main__": main()