Datasets:

jang1563
/

NegBioDB

Tasks:

Text Classification

Text Generation

Tabular Classification

Modalities:

Formats:

Languages:

Size:

Tags:

clinical-trials

protein-protein-interaction

gene-essentiality

Libraries:

License:

Dataset card Data Studio Files Files and versions

NegBioDB / scripts_ppi

170 kB

1 contributor

History: 1 commit

jang1563's picture

NegBioDB final: 4 domains, fully audited

6d1bbc7 11 days ago

analyze_ppi_contamination.py

11.8 kB
NegBioDB final: 4 domains, fully audited 11 days ago
build_ppi_l1_dataset.py

6.68 kB
NegBioDB final: 4 domains, fully audited 11 days ago
build_ppi_l2_dataset.py

6.83 kB
NegBioDB final: 4 domains, fully audited 11 days ago
build_ppi_l3_dataset.py

8.47 kB
NegBioDB final: 4 domains, fully audited 11 days ago
build_ppi_l4_dataset.py

17.5 kB
NegBioDB final: 4 domains, fully audited 11 days ago
collect_ppi_llm_results.py

15.2 kB
NegBioDB final: 4 domains, fully audited 11 days ago
collect_results.py

19.2 kB
NegBioDB final: 4 domains, fully audited 11 days ago
download_biogrid.py

1.35 kB
NegBioDB final: 4 domains, fully audited 11 days ago
download_humap.py

1.34 kB
NegBioDB final: 4 domains, fully audited 11 days ago
download_huri.py

3.85 kB
NegBioDB final: 4 domains, fully audited 11 days ago
download_intact.py

1.21 kB
NegBioDB final: 4 domains, fully audited 11 days ago
download_string.py

1.41 kB
NegBioDB final: 4 domains, fully audited 11 days ago
export_ppi_ml_dataset.py

4.61 kB
NegBioDB final: 4 domains, fully audited 11 days ago
fetch_pmid_abstracts.py

6.26 kB
NegBioDB final: 4 domains, fully audited 11 days ago
fetch_protein_functions.py

6.04 kB
NegBioDB final: 4 domains, fully audited 11 days ago
fetch_sequences.py

8.83 kB
NegBioDB final: 4 domains, fully audited 11 days ago
load_humap.py

1.28 kB
NegBioDB final: 4 domains, fully audited 11 days ago
load_huri.py

1.47 kB
NegBioDB final: 4 domains, fully audited 11 days ago
load_intact.py

1.06 kB
NegBioDB final: 4 domains, fully audited 11 days ago
load_string.py

1.21 kB
NegBioDB final: 4 domains, fully audited 11 days ago
prepare_exp_data.py

7.32 kB
NegBioDB final: 4 domains, fully audited 11 days ago
reeval_ppi_llm.py

5.15 kB
NegBioDB final: 4 domains, fully audited 11 days ago
run_ppi_l3_judge.py

6.95 kB
NegBioDB final: 4 domains, fully audited 11 days ago
run_ppi_llm_benchmark.py

8.2 kB
NegBioDB final: 4 domains, fully audited 11 days ago
train_baseline.py

17 kB
NegBioDB final: 4 domains, fully audited 11 days ago