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"""Utilities used for tensor conversion collections."""
import dataclasses
import operator
from abc import ABC
from collections import defaultdict, OrderedDict
from collections.abc import Mapping, Sequence
from copy import copy, deepcopy
from functools import partial
from typing import Any, Callable, List, Optional, Tuple, Union
import numpy as np
import torch
_CPU_DEVICES = ("cpu", torch.device("cpu"))
__all__ = ['move_data_to_device']
def to_dtype_tensor(
value: Union[int, float, List[Union[int, float]]], dtype: torch.dtype, device: Union[str, torch.device]
) -> torch.Tensor:
return torch.tensor(value, dtype=dtype, device=device)
def from_numpy(value: np.ndarray, device: Union[str, torch.device]) -> torch.Tensor:
return torch.from_numpy(value).to(device)
def to_numpy(value: torch.Tensor) -> np.ndarray:
return value.cpu().numpy()
CONVERSION_DTYPES: List[Tuple[Any, Callable[[Any, Any], torch.Tensor]]] = [
# bool -> uint8 as bool -> torch.bool triggers RuntimeError: Unsupported data type for NCCL process group
(bool, partial(to_dtype_tensor, dtype=torch.uint8)),
(int, partial(to_dtype_tensor, dtype=torch.int)),
(np.int32, partial(to_dtype_tensor, dtype=torch.int)),
(float, partial(to_dtype_tensor, dtype=torch.float)),
(np.float16, partial(to_dtype_tensor, dtype=torch.half)),
(np.float32, partial(to_dtype_tensor, dtype=torch.float)),
(np.ndarray, from_numpy),
]
def _is_namedtuple(obj: object) -> bool:
# https://github.com/pytorch/pytorch/blob/v1.8.1/torch/nn/parallel/scatter_gather.py#L4-L8
return isinstance(obj, tuple) and hasattr(obj, "_asdict") and hasattr(obj, "_fields")
def _is_dataclass_instance(obj: object) -> bool:
# https://docs.python.org/3/library/dataclasses.html#module-level-decorators-classes-and-functions
return dataclasses.is_dataclass(obj) and not isinstance(obj, type)
def apply_to_collection(
data: Any,
dtype: Union[type, Any, Tuple[Union[type, Any]]],
function: Callable,
*args: Any,
wrong_dtype: Optional[Union[type, Tuple[type]]] = None,
include_none: bool = True,
**kwargs: Any,
) -> Any:
"""Recursively applies a function to all elements of a certain dtype.
Args:
data: the collection to apply the function to
dtype: the given function will be applied to all elements of this dtype
function: the function to apply
*args: positional arguments (will be forwarded to calls of ``function``)
wrong_dtype: the given function won't be applied if this type is specified and the given collections
is of the ``wrong_dtype`` even if it is of type ``dtype``
include_none: Whether to include an element if the output of ``function`` is ``None``.
**kwargs: keyword arguments (will be forwarded to calls of ``function``)
Returns:
The resulting collection
"""
# Breaking condition
if isinstance(data, dtype) and (wrong_dtype is None or not isinstance(data, wrong_dtype)):
return function(data, *args, **kwargs)
elem_type = type(data)
# Recursively apply to collection items
if isinstance(data, Mapping):
out = []
for k, v in data.items():
v = apply_to_collection(
v, dtype, function, *args, wrong_dtype=wrong_dtype, include_none=include_none, **kwargs
)
if include_none or v is not None:
out.append((k, v))
if isinstance(data, defaultdict):
return elem_type(data.default_factory, OrderedDict(out))
return elem_type(OrderedDict(out))
is_namedtuple = _is_namedtuple(data)
is_sequence = isinstance(data, Sequence) and not isinstance(data, (str, bytes, bytearray))
if is_namedtuple or is_sequence:
out = []
for d in data:
v = apply_to_collection(
d, dtype, function, *args, wrong_dtype=wrong_dtype, include_none=include_none, **kwargs
)
if include_none or v is not None:
out.append(v)
return elem_type(*out) if is_namedtuple else elem_type(out)
if _is_dataclass_instance(data):
# make a deepcopy of the data,
# but do not deepcopy mapped fields since the computation would
# be wasted on values that likely get immediately overwritten
fields = {}
memo = {}
for field in dataclasses.fields(data):
field_value = getattr(data, field.name)
fields[field.name] = (field_value, field.init)
memo[id(field_value)] = field_value
result = deepcopy(data, memo=memo)
# apply function to each field
for field_name, (field_value, field_init) in fields.items():
if field_init:
v = apply_to_collection(
field_value,
dtype,
function,
*args,
wrong_dtype=wrong_dtype,
include_none=include_none,
**kwargs,
)
if not field_init or (not include_none and v is None): # retain old value
v = getattr(data, field_name)
try:
setattr(result, field_name, v)
except dataclasses.FrozenInstanceError as e:
raise Exception(
"A frozen dataclass was passed to `apply_to_collection` but this is not allowed."
" HINT: is your batch a frozen dataclass?"
) from e
return result
# data is neither of dtype, nor a collection
return data
def apply_to_collections(
data1: Optional[Any],
data2: Optional[Any],
dtype: Union[type, Any, Tuple[Union[type, Any]]],
function: Callable,
*args: Any,
wrong_dtype: Optional[Union[type, Tuple[type]]] = None,
**kwargs: Any,
) -> Any:
"""Zips two collections and applies a function to their items of a certain dtype.
Args:
data1: The first collection
data2: The second collection
dtype: the given function will be applied to all elements of this dtype
function: the function to apply
*args: positional arguments (will be forwarded to calls of ``function``)
wrong_dtype: the given function won't be applied if this type is specified and the given collections
is of the ``wrong_dtype`` even if it is of type ``dtype``
**kwargs: keyword arguments (will be forwarded to calls of ``function``)
Returns:
The resulting collection
Raises:
AssertionError:
If sequence collections have different data sizes.
"""
if data1 is None:
if data2 is None:
return
# in case they were passed reversed
data1, data2 = data2, None
elem_type = type(data1)
if isinstance(data1, dtype) and data2 is not None and (wrong_dtype is None or not isinstance(data1, wrong_dtype)):
return function(data1, data2, *args, **kwargs)
if isinstance(data1, Mapping) and data2 is not None:
# use union because we want to fail if a key does not exist in both
zipped = {k: (data1[k], data2[k]) for k in data1.keys() | data2.keys()}
return elem_type(
{
k: apply_to_collections(*v, dtype, function, *args, wrong_dtype=wrong_dtype, **kwargs)
for k, v in zipped.items()
}
)
is_namedtuple = _is_namedtuple(data1)
is_sequence = isinstance(data1, Sequence) and not isinstance(data1, str)
if (is_namedtuple or is_sequence) and data2 is not None:
assert len(data1) == len(data2), "Sequence collections have different sizes"
out = [
apply_to_collections(v1, v2, dtype, function, *args, wrong_dtype=wrong_dtype, **kwargs)
for v1, v2 in zip(data1, data2)
]
return elem_type(*out) if is_namedtuple else elem_type(out)
return apply_to_collection(data1, dtype, function, *args, wrong_dtype=wrong_dtype, **kwargs)
class TransferableDataType(ABC):
"""A custom type for data that can be moved to a torch device via ``.to(...)``.
Example:
>>> isinstance(dict, TransferableDataType)
False
>>> isinstance(torch.rand(2, 3), TransferableDataType)
True
>>> class CustomObject:
... def __init__(self):
... self.x = torch.rand(2, 2)
... def to(self, device):
... self.x = self.x.to(device)
... return self
>>> isinstance(CustomObject(), TransferableDataType)
True
"""
@classmethod
def __subclasshook__(cls, subclass: Any) -> Union[bool, Any]:
if cls is TransferableDataType:
to = getattr(subclass, "to", None)
return callable(to)
return NotImplemented
def move_data_to_device(batch: Any, device: Union[str, torch.device],
non_blocking: Optional[bool] = None) -> Any:
"""Transfers a collection of data to the given device. Any object that defines a method ``to(device)`` will be
moved and all other objects in the collection will be left untouched.
Args:
batch: A tensor or collection of tensors or anything that has a method ``.to(...)``.
See :func:`apply_to_collection` for a list of supported collection types.
device: The device to which the data should be moved
non_blocking: Force non-blocking copy or not.
Return:
the same collection but with all contained tensors residing on the new device.
See Also:
- :meth:`torch.Tensor.to`
- :class:`torch.device`
"""
def batch_to(data: Any) -> Any:
kwargs = {}
# Don't issue non-blocking transfers to CPU
if isinstance(data, torch.Tensor) and device not in _CPU_DEVICES:
kwargs["non_blocking"] = True
if non_blocking is not None:
kwargs["non_blocking"] = non_blocking
data_output = data.to(device, **kwargs)
# XXX(haibin.lin): deepspeed dtype patch
import cruise
try:
trainer_params = cruise.last_cli().hparams.trainer
if trainer_params.strategy.startswith('deepspeed'):
if torch.is_floating_point(data_output):
dtype = cruise.utilities.PrecisionType.to_dtype(trainer_params.precision)
data_output = data_output.to(dtype)
except RuntimeError:
# cli may not exist
pass
if data_output is not None:
return data_output
# user wrongly implemented the `TransferableDataType` and forgot to return `self`.
return data
dtype = TransferableDataType
return apply_to_collection(batch, dtype=dtype, function=batch_to)
def convert_to_tensors(data: Any, device: Union[str, torch.device]) -> Any:
for src_dtype, conversion_func in CONVERSION_DTYPES:
data = apply_to_collection(data, src_dtype, conversion_func, device=device)
def _move_to_device_and_make_contiguous(t: torch.Tensor, device: Union[str, torch.device]) -> torch.Tensor:
return t.to(device).contiguous()
data = apply_to_collection(data, torch.Tensor, _move_to_device_and_make_contiguous, device=device)
return data
def convert_tensors_to_numpy(data: Any) -> Any:
data = apply_to_collection(data, torch.Tensor, to_numpy)
return data