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miniconda3/bin/normalizer

@@ -0,0 +1,11 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python
+
+# -*- coding: utf-8 -*-
+import re
+import sys
+
+from charset_normalizer.cli import cli_detect
+
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
+    sys.exit(cli_detect())

miniconda3/bin/pcre2-config

@@ -0,0 +1,121 @@
+#!/bin/sh
+
+prefix=/mnt/bn/bohanzhainas1/jiashuo/miniconda3
+exec_prefix=${prefix}
+exec_prefix_set=no
+
+cflags="[--cflags]"
+libs=
+
+if test yes = yes ; then
+  libs="[--libs16] $libs"
+fi
+
+if test yes = yes ; then
+  libs="[--libs32] $libs"
+fi
+
+if test yes = yes ; then
+  libs="[--libs8] [--libs-posix] $libs"
+  cflags="$cflags [--cflags-posix]"
+fi
+
+usage="Usage: pcre2-config [--prefix] [--exec-prefix] [--version] $libs $cflags"
+
+if test $# -eq 0; then
+      echo "${usage}" 1>&2
+      exit 1
+fi
+
+libR=
+case `uname -s` in
+  *SunOS*)
+  libR=" -R${exec_prefix}/lib"
+  ;;
+  *BSD*)
+  libR=" -Wl,-R${exec_prefix}/lib"
+  ;;
+esac
+
+libS=
+if test ${exec_prefix}/lib != /usr/lib ; then
+  libS=-L${exec_prefix}/lib
+fi
+
+while test $# -gt 0; do
+  case "$1" in
+  -*=*) optarg=`echo "$1" | sed 's/[-_a-zA-Z0-9]*=//'` ;;
+  *) optarg= ;;
+  esac
+
+  case $1 in
+    --prefix=*)
+      prefix=$optarg
+      if test $exec_prefix_set = no ; then
+        exec_prefix=$optarg
+      fi
+      ;;
+    --prefix)
+      echo $prefix
+      ;;
+    --exec-prefix=*)
+      exec_prefix=$optarg
+      exec_prefix_set=yes
+      ;;
+    --exec-prefix)
+      echo $exec_prefix
+      ;;
+    --version)
+      echo 10.46
+      ;;
+    --cflags)
+      if test ${prefix}/include != /usr/include ; then
+        includes=-I${prefix}/include
+      fi
+      echo $includes 
+      ;;
+    --cflags-posix)
+      if test yes = yes ; then
+        if test ${prefix}/include != /usr/include ; then
+          includes=-I${prefix}/include
+        fi
+        echo $includes -DPCRE2POSIX_SHARED
+      else
+        echo "${usage}" 1>&2
+      fi
+      ;;
+    --libs-posix)
+      if test yes = yes ; then
+        echo $libS$libR -lpcre2-posix -lpcre2-8
+      else
+        echo "${usage}" 1>&2
+      fi
+      ;;
+    --libs8)
+      if test yes = yes ; then
+        echo $libS$libR -lpcre2-8
+      else
+        echo "${usage}" 1>&2
+      fi
+      ;;
+    --libs16)
+      if test yes = yes ; then
+        echo $libS$libR -lpcre2-16
+      else
+        echo "${usage}" 1>&2
+      fi
+      ;;
+    --libs32)
+      if test yes = yes ; then
+        echo $libS$libR -lpcre2-32
+      else
+        echo "${usage}" 1>&2
+      fi
+      ;;
+    *)
+      echo "${usage}" 1>&2
+      exit 1
+      ;;
+  esac
+  shift
+done

miniconda3/bin/pip

@@ -0,0 +1,10 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python3.13
+# -*- coding: utf-8 -*-
+import re
+import sys
+
+from pip._internal.cli.main import main
+
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

miniconda3/bin/pip3

@@ -0,0 +1,10 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python3.13
+# -*- coding: utf-8 -*-
+import re
+import sys
+
+from pip._internal.cli.main import main
+
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

miniconda3/bin/pydoc

@@ -0,0 +1,5 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python3.13
+
+import pydoc
+if __name__ == '__main__':
+    pydoc.cli()

miniconda3/bin/pydoc3

@@ -0,0 +1,5 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python3.13
+
+import pydoc
+if __name__ == '__main__':
+    pydoc.cli()

miniconda3/bin/pydoc3.13

@@ -0,0 +1,5 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python3.13
+
+import pydoc
+if __name__ == '__main__':
+    pydoc.cli()

miniconda3/bin/pygmentize

@@ -0,0 +1,11 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python
+
+# -*- coding: utf-8 -*-
+import re
+import sys
+
+from pygments.cmdline import main
+
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

miniconda3/bin/pysemver

@@ -0,0 +1,11 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python
+
+# -*- coding: utf-8 -*-
+import re
+import sys
+
+from semver.cli import main
+
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

miniconda3/bin/python3-config

@@ -0,0 +1,122 @@
+#!/bin/sh
+
+# Keep this script in sync with python-config.in
+
+exit_with_usage ()
+{
+    local usage
+    usage="Usage: $0 --prefix|--exec-prefix|--includes|--libs|--cflags|--ldflags|--extension-suffix|--help|--abiflags|--configdir|--embed"
+    if [ "$1" -eq 0 ]; then
+        echo "$usage"
+    else
+        echo "$usage" >&2
+    fi
+    exit $1
+}
+
+if [ "$1" = "" ] ; then
+    exit_with_usage 1
+fi
+
+# Returns the actual prefix where this script was installed to.
+installed_prefix ()
+{
+    RESULT=$(dirname $(cd $(dirname "$1") && pwd -P))
+    if which readlink >/dev/null 2>&1 ; then
+        if readlink -f "$RESULT" >/dev/null 2>&1; then
+          RESULT=$(readlink -f "$RESULT")
+        fi
+    fi
+    echo $RESULT
+}
+
+prefix_real=$(installed_prefix "$0")
+
+# Use sed to fix paths from their built-to locations to their installed-to
+# locations. Keep prefix & exec_prefix using their original values in case
+# they are referenced in other configure variables, to prevent double
+# substitution, issue #22140.
+prefix="/mnt/bn/bohanzhainas1/jiashuo/miniconda3"
+exec_prefix="${prefix}"
+exec_prefix_real=${prefix_real}
+includedir=$(echo "${prefix}/include" | sed "s#$prefix#$prefix_real#")
+libdir=$(echo "${exec_prefix}/lib" | sed "s#$prefix#$prefix_real#")
+CFLAGS=$(echo "-march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O3 -ffunction-sections -pipe -isystem /mnt/bn/bohanzhainas1/jiashuo/miniconda3/include -fdebug-prefix-map=/home/task_177194891265482/croot/python-split_1771948977002/work=/usr/local/src/conda/python-3.13.12 -fdebug-prefix-map=/mnt/bn/bohanzhainas1/jiashuo/miniconda3=/usr/local/src/conda-prefix -fuse-linker-plugin -ffat-lto-objects -flto-partition=none -flto" | sed "s#$prefix#$prefix_real#")
+VERSION="3.13"
+LIBM="-lm"
+LIBC=""
+SYSLIBS="$LIBM $LIBC"
+ABIFLAGS=""
+LIBS=" -lpthread -ldl  -lutil $SYSLIBS"
+LIBS_EMBED="-lpython${VERSION}${ABIFLAGS} -lpthread -ldl  -lutil $SYSLIBS"
+BASECFLAGS=" -fno-strict-overflow -Wsign-compare"
+LDLIBRARY="libpython${VERSION}${ABIFLAGS}.a"
+OPT="-DNDEBUG -O3 -Wall"
+PY_ENABLE_SHARED="0"
+LDVERSION="${VERSION}${ABIFLAGS}"
+LIBDEST=${prefix_real}/lib/python${VERSION}
+LIBPL=$(echo "${prefix}/lib/python3.13/config-${VERSION}${ABIFLAGS}-x86_64-linux-gnu" | sed "s#$prefix#$prefix_real#")
+SO=".cpython-313-x86_64-linux-gnu.so"
+PYTHONFRAMEWORK=""
+INCDIR="-I$includedir/python${VERSION}${ABIFLAGS}"
+PLATINCDIR="-I$includedir/python${VERSION}${ABIFLAGS}"
+PY_EMBED=0
+
+# Scan for --help or unknown argument.
+for ARG in $*
+do
+    case $ARG in
+        --help)
+            exit_with_usage 0
+        ;;
+        --embed)
+            PY_EMBED=1
+        ;;
+        --prefix|--exec-prefix|--includes|--libs|--cflags|--ldflags|--extension-suffix|--abiflags|--configdir)
+        ;;
+        *)
+            exit_with_usage 1
+        ;;
+    esac
+done
+
+if [ $PY_EMBED = 1 ] ; then
+    LIBS="$LIBS_EMBED"
+fi
+
+for ARG in "$@"
+do
+    case "$ARG" in
+        --prefix)
+            echo "$prefix_real"
+        ;;
+        --exec-prefix)
+            echo "$exec_prefix_real"
+        ;;
+        --includes)
+            echo "$INCDIR $PLATINCDIR"
+        ;;
+        --cflags)
+            echo "$INCDIR $PLATINCDIR $BASECFLAGS $CFLAGS $OPT"
+        ;;
+        --libs)
+            echo "$LIBS"
+        ;;
+        --ldflags)
+            LIBPLUSED=
+            if [ "$PY_ENABLE_SHARED" = "0" ] ; then
+                LIBPLUSED="-L$LIBPL"
+            fi
+            echo "$LIBPLUSED -L$libdir $LIBS"
+        ;;
+        --extension-suffix)
+            echo "$SO"
+        ;;
+        --abiflags)
+            echo "$ABIFLAGS"
+        ;;
+        --configdir)
+            echo "$LIBPL"
+        ;;
+esac
+done

miniconda3/bin/python3.13-config

@@ -0,0 +1,122 @@
+#!/bin/sh
+
+# Keep this script in sync with python-config.in
+
+exit_with_usage ()
+{
+    local usage
+    usage="Usage: $0 --prefix|--exec-prefix|--includes|--libs|--cflags|--ldflags|--extension-suffix|--help|--abiflags|--configdir|--embed"
+    if [ "$1" -eq 0 ]; then
+        echo "$usage"
+    else
+        echo "$usage" >&2
+    fi
+    exit $1
+}
+
+if [ "$1" = "" ] ; then
+    exit_with_usage 1
+fi
+
+# Returns the actual prefix where this script was installed to.
+installed_prefix ()
+{
+    RESULT=$(dirname $(cd $(dirname "$1") && pwd -P))
+    if which readlink >/dev/null 2>&1 ; then
+        if readlink -f "$RESULT" >/dev/null 2>&1; then
+          RESULT=$(readlink -f "$RESULT")
+        fi
+    fi
+    echo $RESULT
+}
+
+prefix_real=$(installed_prefix "$0")
+
+# Use sed to fix paths from their built-to locations to their installed-to
+# locations. Keep prefix & exec_prefix using their original values in case
+# they are referenced in other configure variables, to prevent double
+# substitution, issue #22140.
+prefix="/mnt/bn/bohanzhainas1/jiashuo/miniconda3"
+exec_prefix="${prefix}"
+exec_prefix_real=${prefix_real}
+includedir=$(echo "${prefix}/include" | sed "s#$prefix#$prefix_real#")
+libdir=$(echo "${exec_prefix}/lib" | sed "s#$prefix#$prefix_real#")
+CFLAGS=$(echo "-march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O3 -ffunction-sections -pipe -isystem /mnt/bn/bohanzhainas1/jiashuo/miniconda3/include -fdebug-prefix-map=/home/task_177194891265482/croot/python-split_1771948977002/work=/usr/local/src/conda/python-3.13.12 -fdebug-prefix-map=/mnt/bn/bohanzhainas1/jiashuo/miniconda3=/usr/local/src/conda-prefix -fuse-linker-plugin -ffat-lto-objects -flto-partition=none -flto" | sed "s#$prefix#$prefix_real#")
+VERSION="3.13"
+LIBM="-lm"
+LIBC=""
+SYSLIBS="$LIBM $LIBC"
+ABIFLAGS=""
+LIBS=" -lpthread -ldl  -lutil $SYSLIBS"
+LIBS_EMBED="-lpython${VERSION}${ABIFLAGS} -lpthread -ldl  -lutil $SYSLIBS"
+BASECFLAGS=" -fno-strict-overflow -Wsign-compare"
+LDLIBRARY="libpython${VERSION}${ABIFLAGS}.a"
+OPT="-DNDEBUG -O3 -Wall"
+PY_ENABLE_SHARED="0"
+LDVERSION="${VERSION}${ABIFLAGS}"
+LIBDEST=${prefix_real}/lib/python${VERSION}
+LIBPL=$(echo "${prefix}/lib/python3.13/config-${VERSION}${ABIFLAGS}-x86_64-linux-gnu" | sed "s#$prefix#$prefix_real#")
+SO=".cpython-313-x86_64-linux-gnu.so"
+PYTHONFRAMEWORK=""
+INCDIR="-I$includedir/python${VERSION}${ABIFLAGS}"
+PLATINCDIR="-I$includedir/python${VERSION}${ABIFLAGS}"
+PY_EMBED=0
+
+# Scan for --help or unknown argument.
+for ARG in $*
+do
+    case $ARG in
+        --help)
+            exit_with_usage 0
+        ;;
+        --embed)
+            PY_EMBED=1
+        ;;
+        --prefix|--exec-prefix|--includes|--libs|--cflags|--ldflags|--extension-suffix|--abiflags|--configdir)
+        ;;
+        *)
+            exit_with_usage 1
+        ;;
+    esac
+done
+
+if [ $PY_EMBED = 1 ] ; then
+    LIBS="$LIBS_EMBED"
+fi
+
+for ARG in "$@"
+do
+    case "$ARG" in
+        --prefix)
+            echo "$prefix_real"
+        ;;
+        --exec-prefix)
+            echo "$exec_prefix_real"
+        ;;
+        --includes)
+            echo "$INCDIR $PLATINCDIR"
+        ;;
+        --cflags)
+            echo "$INCDIR $PLATINCDIR $BASECFLAGS $CFLAGS $OPT"
+        ;;
+        --libs)
+            echo "$LIBS"
+        ;;
+        --ldflags)
+            LIBPLUSED=
+            if [ "$PY_ENABLE_SHARED" = "0" ] ; then
+                LIBPLUSED="-L$LIBPL"
+            fi
+            echo "$LIBPLUSED -L$libdir $LIBS"
+        ;;
+        --extension-suffix)
+            echo "$SO"
+        ;;
+        --abiflags)
+            echo "$ABIFLAGS"
+        ;;
+        --configdir)
+            echo "$LIBPL"
+        ;;
+esac
+done

miniconda3/bin/sqlite3_analyzer

@@ -0,0 +1,899 @@
+#! /bin/sh
+# restart with tclsh \
+exec tclsh "$0" ${1+"$@"}
+package require sqlite3
+
+# Run this TCL script using an SQLite-enabled TCL interpreter to get a report
+# on how much disk space is used by a particular data to actually store data
+# versus how much space is unused.
+#
+# The dbstat virtual table is required.
+#
+
+if {[catch {
+
+# Argument $tname is the name of a table within the database opened by
+# database handle [db]. Return true if it is a WITHOUT ROWID table, or
+# false otherwise.
+#
+proc is_without_rowid {tname} {
+  set t [string map {' ''} $tname]
+  db eval "PRAGMA index_list = '$t'" o {
+    if {$o(origin) == "pk"} {
+      set n $o(name)
+      if {0==[db one { SELECT count(*) FROM sqlite_schema WHERE name=$n }]} {
+        return 1
+      }
+    }
+  }
+  return 0
+}
+
+# Read and run TCL commands from standard input.  Used to implement
+# the --tclsh option.
+#
+proc tclsh {} {
+  set line {}
+  while {![eof stdin]} {
+    if {$line!=""} {
+      puts -nonewline "> "
+    } else {
+      puts -nonewline "% "
+    }
+    flush stdout
+    append line [gets stdin]
+    if {[info complete $line]} {
+      if {[catch {uplevel #0 $line} result]} {
+        puts stderr "Error: $result"
+      } elseif {$result!=""} {
+        puts $result
+      }
+      set line {}
+    } else {
+      append line \n
+    }
+  }
+}
+
+
+# Get the name of the database to analyze
+#
+proc usage {} {
+  set argv0 [file rootname [file tail [info script]]]
+  puts stderr "Usage: $argv0 ?--pageinfo? ?--stats? database-filename"
+  puts stderr {
+Analyze the SQLite3 database file specified by the "database-filename"
+argument and output a report detailing size and storage efficiency
+information for the database and its constituent tables and indexes.
+
+Options:
+
+   --pageinfo   Show how each page of the database-file is used
+
+   --stats      Output SQL text that creates a new database containing
+                statistics about the database that was analyzed
+
+   --tclsh      Run the built-in TCL interpreter interactively (for debugging)
+
+   --version    Show the version number of SQLite
+}
+  exit 1
+}
+set file_to_analyze {}
+set flags(-pageinfo) 0
+set flags(-stats) 0
+set flags(-debug) 0
+append argv {}
+foreach arg $argv {
+  if {[regexp {^-+pageinfo$} $arg]} {
+    set flags(-pageinfo) 1
+  } elseif {[regexp {^-+stats$} $arg]} {
+    set flags(-stats) 1
+  } elseif {[regexp {^-+debug$} $arg]} {
+    set flags(-debug) 1
+  } elseif {[regexp {^-+tclsh$} $arg]} {
+    tclsh
+    exit 0
+  } elseif {[regexp {^-+version$} $arg]} {
+    sqlite3 mem :memory:
+    puts [mem one {SELECT sqlite_version()||' '||sqlite_source_id()}]
+    mem close
+    exit 0
+  } elseif {[regexp {^-} $arg]} {
+    puts stderr "Unknown option: $arg"
+    usage
+  } elseif {$file_to_analyze!=""} {
+    usage
+  } else {
+    set file_to_analyze $arg
+  }
+}
+if {$file_to_analyze==""} usage
+set root_filename $file_to_analyze
+regexp {^file:(//)?([^?]*)} $file_to_analyze all x1 root_filename
+if {![file exists $root_filename]} {
+  puts stderr "No such file: $root_filename"
+  exit 1
+}
+if {![file readable $root_filename]} {
+  puts stderr "File is not readable: $root_filename"
+  exit 1
+}
+set true_file_size [file size $root_filename]
+if {$true_file_size<512} {
+  puts stderr "Empty or malformed database: $root_filename"
+  exit 1
+}
+
+# Compute the total file size assuming test_multiplexor is being used.
+# Assume that SQLITE_ENABLE_8_3_NAMES might be enabled
+#
+set extension [file extension $root_filename]
+set pattern $root_filename
+append pattern {[0-3][0-9][0-9]}
+foreach f [glob -nocomplain $pattern] {
+  incr true_file_size [file size $f]
+  set extension {}
+}
+if {[string length $extension]>=2 && [string length $extension]<=4} {
+  set pattern [file rootname $root_filename]
+  append pattern {.[0-3][0-9][0-9]}
+  foreach f [glob -nocomplain $pattern] {
+    incr true_file_size [file size $f]
+  }
+}
+
+# Open the database
+#
+if {[catch {sqlite3 db $file_to_analyze -uri 1} msg]} {
+  puts stderr "error trying to open $file_to_analyze: $msg"
+  exit 1
+}
+if {$flags(-debug)} {
+  proc dbtrace {txt} {puts $txt; flush stdout;}
+  db trace ::dbtrace
+}
+
+# Make sure all required compile-time options are available
+#
+if {![db exists {SELECT 1 FROM pragma_compile_options
+                WHERE compile_options='ENABLE_DBSTAT_VTAB'}]} {
+  puts "The SQLite database engine linked with this application\
+        lacks required capabilities. Recompile using the\
+        -DSQLITE_ENABLE_DBSTAT_VTAB compile-time option to fix\
+        this problem."
+  exit 1
+}
+
+db eval {SELECT count(*) FROM sqlite_schema}
+set pageSize [expr {wide([db one {PRAGMA page_size}])}]
+
+if {$flags(-pageinfo)} {
+  db eval {CREATE VIRTUAL TABLE temp.stat USING dbstat}
+  db eval {SELECT name, path, pageno FROM temp.stat ORDER BY pageno} {
+    puts "$pageno $name $path"
+  }
+  exit 0
+}
+if {$flags(-stats)} {
+  db eval {CREATE VIRTUAL TABLE temp.stat USING dbstat}
+  puts "BEGIN;"
+  puts "CREATE TABLE stats("
+  puts "  name       STRING,           /* Name of table or index */"
+  puts "  path       INTEGER,          /* Path to page from root */"
+  puts "  pageno     INTEGER,          /* Page number */"
+  puts "  pagetype   STRING,           /* 'internal', 'leaf' or 'overflow' */"
+  puts "  ncell      INTEGER,          /* Cells on page (0 for overflow) */"
+  puts "  payload    INTEGER,          /* Bytes of payload on this page */"
+  puts "  unused     INTEGER,          /* Bytes of unused space on this page */"
+  puts "  mx_payload INTEGER,          /* Largest payload size of all cells */"
+  puts "  pgoffset   INTEGER,          /* Offset of page in file */"
+  puts "  pgsize     INTEGER           /* Size of the page */"
+  puts ");"
+  db eval {SELECT quote(name) || ',' ||
+                  quote(path) || ',' ||
+                  quote(pageno) || ',' ||
+                  quote(pagetype) || ',' ||
+                  quote(ncell) || ',' ||
+                  quote(payload) || ',' ||
+                  quote(unused) || ',' ||
+                  quote(mx_payload) || ',' ||
+                  quote(pgoffset) || ',' ||
+                  quote(pgsize) AS x FROM stat} {
+    puts "INSERT INTO stats VALUES($x);"
+  }
+  puts "COMMIT;"
+  exit 0
+}
+
+
+# In-memory database for collecting statistics. This script loops through
+# the tables and indices in the database being analyzed, adding a row for each
+# to an in-memory database (for which the schema is shown below). It then
+# queries the in-memory db to produce the space-analysis report.
+#
+sqlite3 mem :memory:
+if {$flags(-debug)} {
+  proc dbtrace {txt} {puts $txt; flush stdout;}
+  mem trace ::dbtrace
+}
+set tabledef {CREATE TABLE space_used(
+   name clob,        -- Name of a table or index in the database file
+   tblname clob,     -- Name of associated table
+   is_index boolean, -- TRUE if it is an index, false for a table
+   is_without_rowid boolean, -- TRUE if WITHOUT ROWID table  
+   nentry int,       -- Number of entries in the BTree
+   leaf_entries int, -- Number of leaf entries
+   depth int,        -- Depth of the b-tree
+   payload int,      -- Total amount of data stored in this table or index
+   ovfl_payload int, -- Total amount of data stored on overflow pages
+   ovfl_cnt int,     -- Number of entries that use overflow
+   mx_payload int,   -- Maximum payload size
+   int_pages int,    -- Number of interior pages used
+   leaf_pages int,   -- Number of leaf pages used
+   ovfl_pages int,   -- Number of overflow pages used
+   int_unused int,   -- Number of unused bytes on interior pages
+   leaf_unused int,  -- Number of unused bytes on primary pages
+   ovfl_unused int,  -- Number of unused bytes on overflow pages
+   gap_cnt int,      -- Number of gaps in the page layout
+   compressed_size int  -- Total bytes stored on disk
+);}
+mem eval $tabledef
+
+# Create a temporary "dbstat" virtual table.
+#
+db eval {CREATE VIRTUAL TABLE temp.stat USING dbstat}
+db eval {CREATE TEMP TABLE dbstat AS SELECT * FROM temp.stat
+         ORDER BY name, path}
+db eval {DROP TABLE temp.stat}
+
+set isCompressed 0
+set compressOverhead 0
+set depth 0
+set sql { SELECT name, tbl_name FROM sqlite_schema WHERE rootpage>0 }
+foreach {name tblname} [concat sqlite_schema sqlite_schema [db eval $sql]] {
+
+  set is_index [expr {$name!=$tblname}]
+  set is_without_rowid [is_without_rowid $name]
+  db eval {
+    SELECT 
+      sum(ncell) AS nentry,
+      sum((pagetype=='leaf')*ncell) AS leaf_entries,
+      sum(payload) AS payload,
+      sum((pagetype=='overflow') * payload) AS ovfl_payload,
+      sum(path LIKE '%+000000') AS ovfl_cnt,
+      max(mx_payload) AS mx_payload,
+      sum(pagetype=='internal') AS int_pages,
+      sum(pagetype=='leaf') AS leaf_pages,
+      sum(pagetype=='overflow') AS ovfl_pages,
+      sum((pagetype=='internal') * unused) AS int_unused,
+      sum((pagetype=='leaf') * unused) AS leaf_unused,
+      sum((pagetype=='overflow') * unused) AS ovfl_unused,
+      sum(pgsize) AS compressed_size,
+      max((length(CASE WHEN path LIKE '%+%' THEN '' ELSE path END)+3)/4)
+        AS depth
+    FROM temp.dbstat WHERE name = $name
+  } break
+
+  set total_pages [expr {$leaf_pages+$int_pages+$ovfl_pages}]
+  set storage [expr {$total_pages*$pageSize}]
+  if {!$isCompressed && $storage>$compressed_size} {
+    set isCompressed 1
+    set compressOverhead 14
+  }
+
+  # Column 'gap_cnt' is set to the number of non-contiguous entries in the
+  # list of pages visited if the b-tree structure is traversed in a top-down
+  # fashion (each node visited before its child-tree is passed). Any overflow
+  # chains present are traversed from start to finish before any child-tree
+  # is.
+  #
+  set gap_cnt 0
+  set prev 0
+  db eval {
+    SELECT pageno, pagetype FROM temp.dbstat
+     WHERE name=$name
+     ORDER BY pageno
+  } {
+    if {$prev>0 && $pagetype=="leaf" && $pageno!=$prev+1} {
+      incr gap_cnt
+    }
+    set prev $pageno
+  }
+  mem eval {
+    INSERT INTO space_used VALUES(
+      $name,
+      $tblname,
+      $is_index,
+      $is_without_rowid,
+      $nentry,
+      $leaf_entries,
+      $depth,
+      $payload,     
+      $ovfl_payload,
+      $ovfl_cnt,   
+      $mx_payload,
+      $int_pages,
+      $leaf_pages,  
+      $ovfl_pages, 
+      $int_unused, 
+      $leaf_unused,
+      $ovfl_unused,
+      $gap_cnt,
+      $compressed_size
+    );
+  }
+}
+
+proc integerify {real} {
+  if {[string is double -strict $real]} {
+    return [expr {wide($real)}]
+  } else {
+    return 0
+  }
+}
+mem function int integerify
+
+# Quote a string for use in an SQL query. Examples:
+#
+# [quote {hello world}]   == {'hello world'}
+# [quote {hello world's}] == {'hello world''s'}
+#
+proc quote {txt} {
+  return [string map {' ''} $txt]
+}
+
+# Output a title line
+#
+proc titleline {title} {
+  if {$title==""} {
+    puts [string repeat * 79]
+  } else {
+    set len [string length $title]
+    set stars [string repeat * [expr {79-$len-5}]]
+    puts "*** $title $stars"
+  }
+}
+
+# Generate a single line of output in the statistics section of the
+# report.
+#
+proc statline {title value {extra {}}} {
+  set len [string length $title]
+  set dots [string repeat . [expr {50-$len}]]
+  set len [string length $value]
+  set sp2 [string range {          } $len end]
+  if {$extra ne ""} {
+    set extra " $extra"
+  }
+  puts "$title$dots $value$sp2$extra"
+}
+
+# Generate a formatted percentage value for $num/$denom
+#
+proc percent {num denom {of {}}} {
+  if {$denom==0.0} {return ""}
+  set v [expr {$num*100.0/$denom}]
+  set of {}
+  if {$v==100.0 || $v<0.001 || ($v>1.0 && $v<99.0)} {
+    return [format {%5.1f%% %s} $v $of]
+  } elseif {$v<0.1 || $v>99.9} {
+    return [format {%7.3f%% %s} $v $of]
+  } else {
+    return [format {%6.2f%% %s} $v $of]
+  }
+}
+
+proc divide {num denom} {
+  if {$denom==0} {return 0.0}
+  return [format %.2f [expr {double($num)/double($denom)}]]
+}
+
+# Generate a subreport that covers some subset of the database.
+# the $where clause determines which subset to analyze.
+#
+proc subreport {title where showFrag} {
+  global pageSize file_pgcnt compressOverhead
+
+  # Query the in-memory database for the sum of various statistics 
+  # for the subset of tables/indices identified by the WHERE clause in
+  # $where. Note that even if the WHERE clause matches no rows, the
+  # following query returns exactly one row (because it is an aggregate).
+  #
+  # The results of the query are stored directly by SQLite into local 
+  # variables (i.e. $nentry, $payload etc.).
+  #
+  mem eval "
+    SELECT
+      int(sum(
+        CASE WHEN (is_without_rowid OR is_index) THEN nentry 
+             ELSE leaf_entries 
+        END
+      )) AS nentry,
+      int(sum(payload)) AS payload,
+      int(sum(ovfl_payload)) AS ovfl_payload,
+      max(mx_payload) AS mx_payload,
+      int(sum(ovfl_cnt)) as ovfl_cnt,
+      int(sum(leaf_pages)) AS leaf_pages,
+      int(sum(int_pages)) AS int_pages,
+      int(sum(ovfl_pages)) AS ovfl_pages,
+      int(sum(leaf_unused)) AS leaf_unused,
+      int(sum(int_unused)) AS int_unused,
+      int(sum(ovfl_unused)) AS ovfl_unused,
+      int(sum(gap_cnt)) AS gap_cnt,
+      int(sum(compressed_size)) AS compressed_size,
+      int(max(depth)) AS depth,
+      count(*) AS cnt
+    FROM space_used WHERE $where" {} {}
+
+  # Output the sub-report title, nicely decorated with * characters.
+  #
+  puts ""
+  titleline $title
+  puts ""
+
+  # Calculate statistics and store the results in TCL variables, as follows:
+  #
+  # total_pages: Database pages consumed.
+  # total_pages_percent: Pages consumed as a percentage of the file.
+  # storage: Bytes consumed.
+  # payload_percent: Payload bytes used as a percentage of $storage.
+  # total_unused: Unused bytes on pages.
+  # avg_payload: Average payload per btree entry.
+  # avg_fanout: Average fanout for internal pages.
+  # avg_unused: Average unused bytes per btree entry.
+  # avg_meta: Average metadata overhead per entry.
+  # ovfl_cnt_percent: Percentage of btree entries that use overflow pages.
+  #
+  set total_pages [expr {$leaf_pages+$int_pages+$ovfl_pages}]
+  set total_pages_percent [percent $total_pages $file_pgcnt]
+  set storage [expr {$total_pages*$pageSize}]
+  set payload_percent [percent $payload $storage {of storage consumed}]
+  set total_unused [expr {$ovfl_unused+$int_unused+$leaf_unused}]
+  set avg_payload [divide $payload $nentry]
+  set avg_unused [divide $total_unused $nentry]
+  set total_meta [expr {$storage - $payload - $total_unused}]
+  set total_meta [expr {$total_meta + 4*($ovfl_pages - $ovfl_cnt)}]
+  set meta_percent [percent $total_meta $storage {of metadata}]
+  set avg_meta [divide $total_meta $nentry]
+  if {$int_pages>0} {
+    # TODO: Is this formula correct?
+    set nTab [mem eval "
+      SELECT count(*) FROM (
+          SELECT DISTINCT tblname FROM space_used WHERE $where AND is_index=0
+      )
+    "]
+    set avg_fanout [mem eval "
+      SELECT (sum(leaf_pages+int_pages)-$nTab)/sum(int_pages) FROM space_used
+          WHERE $where
+    "]
+    set avg_fanout [format %.2f $avg_fanout]
+  }
+  set ovfl_cnt_percent [percent $ovfl_cnt $nentry {of all entries}]
+
+  # Print out the sub-report statistics.
+  #
+  statline {Percentage of total database} $total_pages_percent
+  statline {Number of entries} $nentry
+  statline {Bytes of storage consumed} $storage
+  if {$compressed_size!=$storage} {
+    set compressed_size [expr {$compressed_size+$compressOverhead*$total_pages}]
+    set pct [expr {$compressed_size*100.0/$storage}]
+    set pct [format {%5.1f%%} $pct]
+    statline {Bytes used after compression} $compressed_size $pct
+  }
+  statline {Bytes of payload} $payload $payload_percent
+  statline {Bytes of metadata} $total_meta $meta_percent
+  if {$cnt==1} {statline {B-tree depth} $depth}
+  statline {Average payload per entry} $avg_payload
+  statline {Average unused bytes per entry} $avg_unused
+  statline {Average metadata per entry} $avg_meta
+  if {[info exists avg_fanout]} {
+    statline {Average fanout} $avg_fanout
+  }
+  if {$showFrag && $total_pages>1} {
+    set fragmentation [percent $gap_cnt [expr {$total_pages-1}]]
+    statline {Non-sequential pages} $gap_cnt $fragmentation
+  }
+  statline {Maximum payload per entry} $mx_payload
+  statline {Entries that use overflow} $ovfl_cnt $ovfl_cnt_percent
+  if {$int_pages>0} {
+    statline {Index pages used} $int_pages
+  }
+  statline {Primary pages used} $leaf_pages
+  statline {Overflow pages used} $ovfl_pages
+  statline {Total pages used} $total_pages
+  if {$int_unused>0} {
+    set int_unused_percent [
+         percent $int_unused [expr {$int_pages*$pageSize}] {of index space}]
+    statline "Unused bytes on index pages" $int_unused $int_unused_percent
+  }
+  statline "Unused bytes on primary pages" $leaf_unused [
+     percent $leaf_unused [expr {$leaf_pages*$pageSize}] {of primary space}]
+  statline "Unused bytes on overflow pages" $ovfl_unused [
+     percent $ovfl_unused [expr {$ovfl_pages*$pageSize}] {of overflow space}]
+  statline "Unused bytes on all pages" $total_unused [
+               percent $total_unused $storage {of all space}]
+  return 1
+}
+
+# Calculate the overhead in pages caused by auto-vacuum. 
+#
+# This procedure calculates and returns the number of pages used by the 
+# auto-vacuum 'pointer-map'. If the database does not support auto-vacuum,
+# then 0 is returned. The two arguments are the size of the database file in
+# pages and the page size used by the database (in bytes).
+proc autovacuum_overhead {filePages pageSize} {
+
+  # Set $autovacuum to non-zero for databases that support auto-vacuum.
+  set autovacuum [db one {PRAGMA auto_vacuum}]
+
+  # If the database is not an auto-vacuum database or the file consists
+  # of one page only then there is no overhead for auto-vacuum. Return zero.
+  if {0==$autovacuum || $filePages==1} {
+    return 0
+  }
+
+  # The number of entries on each pointer map page. The layout of the
+  # database file is one pointer-map page, followed by $ptrsPerPage other
+  # pages, followed by a pointer-map page etc. The first pointer-map page
+  # is the second page of the file overall.
+  set ptrsPerPage [expr {double($pageSize/5)}]
+
+  # Return the number of pointer map pages in the database.
+  return [expr {wide(ceil(($filePages-1.0)/($ptrsPerPage+1.0)))}]
+}
+
+
+# Calculate the summary statistics for the database and store the results
+# in TCL variables. They are output below. Variables are as follows:
+#
+# pageSize:      Size of each page in bytes.
+# file_bytes:    File size in bytes.
+# file_pgcnt:    Number of pages in the file.
+# file_pgcnt2:   Number of pages in the file (calculated).
+# av_pgcnt:      Pages consumed by the auto-vacuum pointer-map.
+# av_percent:    Percentage of the file consumed by auto-vacuum pointer-map.
+# inuse_pgcnt:   Data pages in the file.
+# inuse_percent: Percentage of pages used to store data.
+# free_pgcnt:    Free pages calculated as (<total pages> - <in-use pages>)
+# free_pgcnt2:   Free pages in the file according to the file header.
+# free_percent:  Percentage of file consumed by free pages (calculated).
+# free_percent2: Percentage of file consumed by free pages (header).
+# ntable:        Number of tables in the db.
+# nindex:        Number of indices in the db.
+# nautoindex:    Number of indices created automatically.
+# nmanindex:     Number of indices created manually.
+# user_payload:  Number of bytes of payload in table btrees 
+#                (not including sqlite_schema)
+# user_percent:  $user_payload as a percentage of total file size.
+
+### The following, setting $file_bytes based on the actual size of the file
+### on disk, causes this tool to choke on zipvfs databases. So set it based
+### on the return of [PRAGMA page_count] instead.
+if 0 {
+  set file_bytes  [file size $file_to_analyze]
+  set file_pgcnt  [expr {$file_bytes/$pageSize}]
+}
+set file_pgcnt  [db one {PRAGMA page_count}]
+set file_bytes  [expr {$file_pgcnt * $pageSize}]
+
+set av_pgcnt    [autovacuum_overhead $file_pgcnt $pageSize]
+set av_percent  [percent $av_pgcnt $file_pgcnt]
+
+set sql {SELECT sum(leaf_pages+int_pages+ovfl_pages) FROM space_used}
+set inuse_pgcnt   [expr {wide([mem eval $sql])}]
+set inuse_percent [percent $inuse_pgcnt $file_pgcnt]
+
+set free_pgcnt    [expr {$file_pgcnt-$inuse_pgcnt-$av_pgcnt}]
+set free_percent  [percent $free_pgcnt $file_pgcnt]
+set free_pgcnt2   [db one {PRAGMA freelist_count}]
+set free_percent2 [percent $free_pgcnt2 $file_pgcnt]
+
+set file_pgcnt2 [expr {$inuse_pgcnt+$free_pgcnt2+$av_pgcnt}]
+
+# Account for the lockbyte page
+if {$file_pgcnt2*$pageSize>1073742335} {incr file_pgcnt2}
+
+set ntable [db eval {SELECT count(*)+1 FROM sqlite_schema WHERE type='table'}]
+set nindex [db eval {SELECT count(*) FROM sqlite_schema WHERE type='index'}]
+set sql {SELECT count(*) FROM sqlite_schema WHERE name LIKE 'sqlite_autoindex%'}
+set nautoindex [db eval $sql]
+set nmanindex [expr {$nindex-$nautoindex}]
+
+# set total_payload [mem eval "SELECT sum(payload) FROM space_used"]
+set user_payload [mem one {SELECT int(sum(payload)) FROM space_used
+     WHERE NOT is_index AND name NOT LIKE 'sqlite_schema'}]
+set user_percent [percent $user_payload $file_bytes]
+
+# Output the summary statistics calculated above.
+#
+puts "/** Disk-Space Utilization Report For $root_filename"
+puts ""
+statline {Page size in bytes} $pageSize
+statline {Pages in the whole file (measured)} $file_pgcnt
+statline {Pages in the whole file (calculated)} $file_pgcnt2
+statline {Pages that store data} $inuse_pgcnt $inuse_percent
+statline {Pages on the freelist (per header)} $free_pgcnt2 $free_percent2
+statline {Pages on the freelist (calculated)} $free_pgcnt $free_percent
+statline {Pages of auto-vacuum overhead} $av_pgcnt $av_percent
+statline {Number of tables in the database} $ntable
+statline {Number of indices} $nindex
+statline {Number of defined indices} $nmanindex
+statline {Number of implied indices} $nautoindex
+if {$isCompressed} {
+  statline {Size of uncompressed content in bytes} $file_bytes
+  set efficiency [percent $true_file_size $file_bytes]
+  statline {Size of compressed file on disk} $true_file_size $efficiency
+} else {
+  statline {Size of the file in bytes} $file_bytes
+}
+statline {Bytes of user payload stored} $user_payload $user_percent
+
+# Output table rankings
+#
+puts ""
+titleline "Page counts for all tables with their indices"
+puts ""
+mem eval {SELECT tblname, count(*) AS cnt, 
+              int(sum(int_pages+leaf_pages+ovfl_pages)) AS size
+          FROM space_used GROUP BY tblname ORDER BY size+0 DESC, tblname} {} {
+  statline [string toupper $tblname] $size [percent $size $file_pgcnt]
+}
+puts ""
+titleline "Page counts for all tables and indices separately"
+puts ""
+mem eval {
+  SELECT
+       upper(name) AS nm,
+       int(int_pages+leaf_pages+ovfl_pages) AS size
+    FROM space_used
+   ORDER BY size+0 DESC, name} {} {
+  statline $nm $size [percent $size $file_pgcnt]
+}
+if {$isCompressed} {
+  puts ""
+  titleline "Bytes of disk space used after compression"
+  puts ""
+  set csum 0
+  mem eval {SELECT tblname,
+                  int(sum(compressed_size)) +
+                         $compressOverhead*sum(int_pages+leaf_pages+ovfl_pages)
+                        AS csize
+          FROM space_used GROUP BY tblname ORDER BY csize+0 DESC, tblname} {} {
+    incr csum $csize
+    statline [string toupper $tblname] $csize [percent $csize $true_file_size]
+  }
+  set overhead [expr {$true_file_size - $csum}]
+  if {$overhead>0} {
+    statline {Header and free space} $overhead [percent $overhead $true_file_size]
+  }
+}
+
+# Output subreports
+#
+if {$nindex>0} {
+  subreport {All tables and indices} 1 0
+}
+subreport {All tables} {NOT is_index} 0
+if {$nindex>0} {
+  subreport {All indices} {is_index} 0
+}
+foreach tbl [mem eval {SELECT DISTINCT tblname name FROM space_used
+                       ORDER BY name}] {
+  set qn [quote $tbl]
+  set name [string toupper $tbl]
+  set n [mem eval {SELECT count(*) FROM space_used WHERE tblname=$tbl}]
+  if {$n>1} {
+    set idxlist [mem eval "SELECT name FROM space_used
+                            WHERE tblname='$qn' AND is_index
+                            ORDER BY 1"]
+    subreport "Table $name and all its indices" "tblname='$qn'" 0
+    subreport "Table $name w/o any indices" "name='$qn'" 1
+    if {[llength $idxlist]>1} {
+      subreport "Indices of table $name" "tblname='$qn' AND is_index" 0
+    }
+    foreach idx $idxlist {
+      set qidx [quote $idx]
+      subreport "Index [string toupper $idx] of table $name" "name='$qidx'" 1
+    }
+  } else {
+    subreport "Table $name" "name='$qn'" 1
+  }
+}
+
+# Output instructions on what the numbers above mean.
+#
+puts ""
+titleline Definitions
+puts {
+Page size in bytes
+
+    The number of bytes in a single page of the database file.  
+    Usually 1024.
+
+Number of pages in the whole file
+}
+puts "    The number of $pageSize-byte pages that go into forming the complete
+    database"
+puts {
+Pages that store data
+
+    The number of pages that store data, either as primary B*Tree pages or
+    as overflow pages.  The number at the right is the data pages divided by
+    the total number of pages in the file.
+
+Pages on the freelist
+
+    The number of pages that are not currently in use but are reserved for
+    future use.  The percentage at the right is the number of freelist pages
+    divided by the total number of pages in the file.
+
+Pages of auto-vacuum overhead
+
+    The number of pages that store data used by the database to facilitate
+    auto-vacuum. This is zero for databases that do not support auto-vacuum.
+
+Number of tables in the database
+
+    The number of tables in the database, including the SQLITE_SCHEMA table
+    used to store schema information.
+
+Number of indices
+
+    The total number of indices in the database.
+
+Number of defined indices
+
+    The number of indices created using an explicit CREATE INDEX statement.
+
+Number of implied indices
+
+    The number of indices used to implement PRIMARY KEY or UNIQUE constraints
+    on tables.
+
+Size of the file in bytes
+
+    The total amount of disk space used by the entire database files.
+
+Bytes of user payload stored
+
+    The total number of bytes of user payload stored in the database. The
+    schema information in the SQLITE_SCHEMA table is not counted when
+    computing this number.  The percentage at the right shows the payload
+    divided by the total file size.
+
+Percentage of total database
+
+    The amount of the complete database file that is devoted to storing
+    information described by this category.
+
+Number of entries
+
+    The total number of B-Tree key/value pairs stored under this category.
+
+Bytes of storage consumed
+
+    The total amount of disk space required to store all B-Tree entries
+    under this category.  The is the total number of pages used times
+    the pages size.
+
+Bytes of payload
+
+    The amount of payload stored under this category.  Payload is the data
+    part of table entries and the key part of index entries.  The percentage
+    at the right is the bytes of payload divided by the bytes of storage 
+    consumed.
+
+Bytes of metadata
+
+    The amount of formatting and structural information stored in the
+    table or index.  Metadata includes the btree page header, the cell pointer
+    array, the size field for each cell, the left child pointer or non-leaf
+    cells, the overflow pointers for overflow cells, and the rowid value for
+    rowid table cells.  In other words, metadata is everything that is neither
+    unused space nor content.  The record header in the payload is counted as
+    content, not metadata.
+
+Average payload per entry
+
+    The average amount of payload on each entry.  This is just the bytes of
+    payload divided by the number of entries.
+
+Average unused bytes per entry
+
+    The average amount of free space remaining on all pages under this
+    category on a per-entry basis.  This is the number of unused bytes on
+    all pages divided by the number of entries.
+
+Non-sequential pages
+
+    The number of pages in the table or index that are out of sequence.
+    Many filesystems are optimized for sequential file access so a small
+    number of non-sequential pages might result in faster queries,
+    especially for larger database files that do not fit in the disk cache.
+    Note that after running VACUUM, the root page of each table or index is
+    at the beginning of the database file and all other pages are in a
+    separate part of the database file, resulting in a single non-
+    sequential page.
+
+Maximum payload per entry
+
+    The largest payload size of any entry.
+
+Entries that use overflow
+
+    The number of entries that user one or more overflow pages.
+
+Total pages used
+
+    This is the number of pages used to hold all information in the current
+    category.  This is the sum of index, primary, and overflow pages.
+
+Index pages used
+
+    This is the number of pages in a table B-tree that hold only key (rowid)
+    information and no data.
+
+Primary pages used
+
+    This is the number of B-tree pages that hold both key and data.
+
+Overflow pages used
+
+    The total number of overflow pages used for this category.
+
+Unused bytes on index pages
+
+    The total number of bytes of unused space on all index pages.  The
+    percentage at the right is the number of unused bytes divided by the
+    total number of bytes on index pages.
+
+Unused bytes on primary pages
+
+    The total number of bytes of unused space on all primary pages.  The
+    percentage at the right is the number of unused bytes divided by the
+    total number of bytes on primary pages.
+
+Unused bytes on overflow pages
+
+    The total number of bytes of unused space on all overflow pages.  The
+    percentage at the right is the number of unused bytes divided by the
+    total number of bytes on overflow pages.
+
+Unused bytes on all pages
+
+    The total number of bytes of unused space on all primary and overflow 
+    pages.  The percentage at the right is the number of unused bytes 
+    divided by the total number of bytes.
+}
+
+# Output a dump of the in-memory database. This can be used for more
+# complex offline analysis.
+#
+titleline {}
+puts "The entire text of this report can be sourced into any SQL database"
+puts "engine for further analysis.  All of the text above is an SQL comment."
+puts "The data used to generate this report follows:"
+puts "*/"
+puts "BEGIN;"
+puts $tabledef
+unset -nocomplain x
+mem eval {SELECT * FROM space_used} x {
+  puts -nonewline "INSERT INTO space_used VALUES"
+  set sep (
+  foreach col $x(*) {
+    set v $x($col)
+    if {$v=="" || ![string is double $v]} {set v '[quote $v]'}
+    puts -nonewline $sep$v
+    set sep ,
+  }
+  puts ");"
+}
+puts "COMMIT;"
+
+} err]} {
+  puts "ERROR: $err"
+  puts $errorInfo
+  exit 1
+}

miniconda3/bin/tqdm

@@ -0,0 +1,11 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python
+
+# -*- coding: utf-8 -*-
+import re
+import sys
+
+from tqdm.cli import main
+
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

miniconda3/bin/typer

@@ -0,0 +1,11 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python
+
+# -*- coding: utf-8 -*-
+import re
+import sys
+
+from typer.cli import main
+
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

miniconda3/bin/wheel

@@ -0,0 +1,11 @@
+#!/mnt/bn/bohanzhainas1/jiashuo/miniconda3/bin/python
+
+# -*- coding: utf-8 -*-
+import re
+import sys
+
+from wheel._commands import main
+
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

miniconda3/bin/xml2-config

@@ -0,0 +1,108 @@
+#! /bin/sh
+
+prefix=/mnt/bn/bohanzhainas1/jiashuo/miniconda3
+exec_prefix=${prefix}
+includedir=${prefix}/include
+libdir=${exec_prefix}/lib
+cflags=
+libs=
+
+usage()
+{
+    cat <<EOF
+Usage: xml2-config [OPTION]
+
+Known values for OPTION are:
+
+  --prefix=DIR		change libxml prefix [default $prefix]
+  --exec-prefix=DIR	change libxml exec prefix [default $exec_prefix]
+  --libs		print library linking information
+                        add --dynamic to print only shared libraries
+  --cflags		print pre-processor and compiler flags
+  --modules		module support enabled
+  --help		display this help and exit
+  --version		output version information
+EOF
+
+    exit $1
+}
+
+if test $# -eq 0; then
+    usage 1
+fi
+
+while test $# -gt 0; do
+    case "$1" in
+    -*=*) optarg=`echo "$1" | sed 's/[-_a-zA-Z0-9]*=//'` ;;
+    *) optarg= ;;
+    esac
+
+    case "$1" in
+    --prefix=*)
+	prefix=$optarg
+	includedir=$prefix/include
+	libdir=$prefix/lib
+	;;
+
+    --prefix)
+	echo $prefix
+	;;
+
+    --exec-prefix=*)
+      exec_prefix=$optarg
+      libdir=$exec_prefix/lib
+      ;;
+
+    --exec-prefix)
+      echo $exec_prefix
+      ;;
+
+    --version)
+	echo 2.13.9
+	exit 0
+	;;
+
+    --help)
+	usage 0
+	;;
+
+    --cflags)
+        cflags="-I${includedir}/libxml2 -I/mnt/bn/bohanzhainas1/jiashuo/miniconda3/include "
+       	;;
+
+    --libtool-libs)
+	if [ -r ${libdir}/libxml2.la ]
+	then
+	    echo ${libdir}/libxml2.la
+	fi
+        ;;
+
+    --modules)
+       	echo 1
+       	;;
+
+    --libs)
+        if [ "$2" = "--dynamic" ]; then
+            shift
+            libs="-lxml2 "
+        else
+            libs="-lxml2  -L/mnt/bn/bohanzhainas1/jiashuo/miniconda3/lib -lz -L/mnt/bn/bohanzhainas1/jiashuo/miniconda3/lib -llzma -L/mnt/bn/bohanzhainas1/jiashuo/miniconda3/lib -licui18n -licuuc -licudata  -L/mnt/bn/bohanzhainas1/jiashuo/miniconda3/lib  -lm   -ldl "
+        fi
+
+        if [ "-L${libdir}" != "-L/usr/lib" -a "-L${libdir}" != "-L/usr/lib64" ]; then
+            libs="-L${libdir} $libs"
+        fi
+        ;;
+
+    *)
+	usage 1
+	;;
+    esac
+    shift
+done
+
+if test -n "$cflags$libs"; then
+    echo $cflags $libs
+fi
+
+exit 0

miniconda3/bin/xzcmp

@@ -0,0 +1,224 @@
+#!/bin/sh
+# SPDX-License-Identifier: GPL-2.0-or-later
+
+# Copyright (C) 1998, 2002, 2006, 2007 Free Software Foundation
+# Copyright (C) 1993 Jean-loup Gailly
+
+# Modified for XZ Utils by Andrew Dudman and Lasse Collin.
+
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# shellcheck shell=sh disable=SC1003,SC2016
+
+
+#SET_PATH - This line is a placeholder to ease patching this script.
+
+# Instead of unsetting XZ_OPT, just make sure that xz will use file format
+# autodetection. This way memory usage limit and thread limit can be
+# specified via XZ_OPT. With gzip, bzip2, and lzop it's OK to just unset the
+# environment variables.
+xz='xz --format=auto'
+unset GZIP BZIP BZIP2 LZOP
+
+case ${0##*/} in
+  *cmp*) prog=xzcmp; cmp=${CMP:-cmp};;
+  *)     prog=xzdiff; cmp=${DIFF:-diff};;
+esac
+
+version="$prog (XZ Utils) 5.8.2"
+
+usage="Usage: ${0##*/} [OPTION]... FILE1 [FILE2]
+Compare FILE1 to FILE2, using their uncompressed contents if they are
+compressed.  If FILE2 is omitted, then the files compared are FILE1 and
+FILE1 from which the compression format suffix has been stripped.
+
+Do comparisons like '$cmp' does.  OPTIONs are the same as for '$cmp'.
+
+Report bugs to <xz@tukaani.org>."
+
+# sed script to escape all ' for the shell, and then (to handle trailing
+# newlines correctly) turn trailing X on last line into '.
+escape='
+  s/'\''/'\''\\'\'''\''/g
+  $s/X$/'\''/
+'
+
+while :; do
+  case $1 in
+    --h*) printf '%s\n' "$usage" || exit 2; exit;;
+    --v*) printf '%s\n' "$version" || exit 2; exit;;
+    --) shift; break;;
+    -*\'*) cmp="$cmp '"`printf '%sX\n' "$1" | sed "$escape"`;;
+    -?*) cmp="$cmp '$1'";;
+    *) break;;
+  esac
+  shift
+done
+cmp="$cmp --"
+
+for file; do
+  test "X$file" = X- || true < "$file" || exit 2
+done
+
+# xz needs -qQ to ignore warnings like unsupported check type.
+xz1="$xz -qQ"
+xz2="$xz -qQ"
+xz_status=0
+exec 3>&1
+
+if test $# -eq 1; then
+  case $1 in
+    *[-.]xz | *[-.]lzma | *[-.]lz | *.t[lx]z)
+      ;;
+    *[-.]bz2 | *.tbz | *.tbz2)
+      xz1=bzip2;;
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z)
+      xz1=gzip;;
+    *[-.]lzo | *.tzo)
+      xz1=lzop;;
+    *[-.]zst | *.tzst)
+      xz1='zstd -q';;
+    *[-.]lz4)
+      xz1=lz4;;
+    *)
+      printf '%s\n' "$0: $1: Unknown compressed file name suffix" >&2
+      exit 2;;
+  esac
+  # The FILE variable is used with eval, and shellcheck doesn't see that.
+  # shellcheck disable=SC2034
+  case $1 in
+    *[-.][zZ] | *_z | *[-.][gx]z | *[-.]bz2 | *[-.]lzma | *[-.]lz | *[-.]lzo | *[-.]zst | *[-.]lz4)
+      FILE=`expr "X$1" : 'X\(.*\)[-.][abglmostxzZ24]*$'`;;
+    *.t[abglx]z)
+      FILE=`expr "X$1" : 'X\(.*[-.]t\)[abglx]z$'`ar;;
+    *.tbz2)
+      FILE=`expr "X$1" : 'X\(.*[-.]t\)bz2$'`ar;;
+    *.tzo)
+      FILE=`expr "X$1" : 'X\(.*[-.]t\)zo$'`ar;;
+    *.tzst)
+      FILE=`expr "X$1" : 'X\(.*[-.]t\)zst$'`ar;;
+  esac
+  xz_status=$(
+    exec 4>&1
+    ($xz1 -cd -- "$1" 4>&-; echo $? >&4) 3>&- | eval "$cmp" - '"$FILE"' >&3
+  )
+elif test $# -eq 2; then
+  case $1 in
+    *[-.]bz2 | *.tbz | *.tbz2) xz1=bzip2;;
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z) xz1=gzip;;
+    *[-.]lzo | *.tzo) xz1=lzop;;
+    *[-.]zst | *.tzst) xz1='zstd -q';;
+    *[-.]lz4) xz1=lz4;;
+  esac
+  case $2 in
+    *[-.]bz2 | *.tbz | *.tbz2) xz2=bzip2;;
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z) xz2=gzip;;
+    *[-.]lzo | *.tzo) xz2=lzop;;
+    *[-.]zst | *.tzst) xz2='zstd -q';;
+    *[-.]lz4) xz2=lz4;;
+  esac
+  case $1 in
+    *[-.][zZ] | *_z | *[-.][gx]z | *[-.]bz2 | *[-.]lzma | *[-.]lz | *.t[abglx]z | *.tbz2 | *[-.]lzo | *.tzo | *[-.]zst | *.tzst | *[-.]lz4 | -)
+      case "$2" in
+        *[-.][zZ] | *_z | *[-.][gx]z | *[-.]bz2 | *[-.]lzma | *[-.]lz | *.t[abglx]z | *.tbz2 | *[-.]lzo | *.tzo | *[-.]zst | *.tzst | *[-.]lz4 | -)
+          if test "$1$2" = --; then
+            xz_status=$(
+              exec 4>&1
+              ($xz1 -cdf - 4>&-; echo $? >&4) 3>&- |
+                eval "$cmp" - - >&3
+            )
+          elif # Reject Solaris 8's buggy /bin/bash 2.03.
+              echo X | (echo X | eval "$cmp" /dev/fd/5 - >/dev/null 2>&1) 5<&0; then
+            # NOTE: xz_status will contain two numbers.
+            xz_status=$(
+              exec 4>&1
+              ($xz1 -cdf -- "$1" 4>&-; echo $? >&4) 3>&- |
+                ( ($xz2 -cdf -- "$2" 4>&-; echo $? >&4) 3>&- 5<&- </dev/null |
+                eval "$cmp" /dev/fd/5 - >&3) 5<&0
+            )
+          else
+            F=`expr "/$2" : '.*/\(.*\)[-.][ablmotxz2]*$'` || F=$prog
+            tmp=
+            trap '
+              test -n "$tmp" && rm -rf "$tmp"
+              (exit 2); exit 2
+            ' HUP INT PIPE TERM 0
+            if type mktemp >/dev/null 2>&1; then
+              # Note that FreeBSD's mktemp isn't fully compatible with
+              # the implementations from mktemp.org and GNU coreutils.
+              # It is important that the -t argument is the last argument
+              # and that no "--" is used between -t and the template argument.
+              # This way this command works on all implementations.
+              tmp=`mktemp -d -t "$prog.XXXXXXXXXX"` || exit 2
+            else
+              # Fallback code if mktemp is missing. This isn't as
+              # robust as using mktemp since this doesn't try with
+              # different file names in case of a file name conflict.
+              #
+              # There's no need to save the original umask since
+              # we don't create any non-temp files. Note that using
+              # mkdir -m 0077 isn't secure since some mkdir implementations
+              # create the dir with the default umask and chmod the
+              # the dir afterwards.
+              umask 0077
+              mkdir -- "${TMPDIR-/tmp}/$prog.$$" || exit 2
+              tmp="${TMPDIR-/tmp}/$prog.$$"
+            fi
+            $xz2 -cdf -- "$2" > "$tmp/$F" || exit 2
+            xz_status=$(
+              exec 4>&1
+              ($xz1 -cdf -- "$1" 4>&-; echo $? >&4) 3>&- |
+                eval "$cmp" - '"$tmp/$F"' >&3
+            )
+            cmp_status=$?
+            rm -rf "$tmp" || xz_status=$?
+            trap - HUP INT PIPE TERM 0
+            (exit $cmp_status)
+          fi;;
+      *)
+        xz_status=$(
+          exec 4>&1
+          ($xz1 -cdf -- "$1" 4>&-; echo $? >&4) 3>&- |
+            eval "$cmp" - '"$2"' >&3
+        );;
+    esac;;
+  *)
+    case "$2" in
+      *[-.][zZ] | *_z | *[-.][gx]z | *[-.]bz2 | *[-.]lzma | *[-.]lz | *.t[abglx]z | *.tbz2 | *[-.]lzo | *.tzo | *[-.]zst | *.tzst | *[-.]lz4 | -)
+        xz_status=$(
+          exec 4>&1
+          ($xz2 -cdf -- "$2" 4>&-; echo $? >&4) 3>&- |
+            eval "$cmp" '"$1"' - >&3
+         );;
+      *)
+        eval "$cmp" '"$1"' '"$2"';;
+    esac;;
+  esac
+else
+  printf '%s\n' "$0: Invalid number of operands; try '${0##*/} --help' for help" >&2
+  exit 2
+fi
+
+cmp_status=$?
+for num in $xz_status ; do
+  # 0 from decompressor means successful decompression. SIGPIPE from
+  # decompressor is possible when diff or cmp exits before the whole file
+  # has been decompressed. In that case we want to retain the exit status
+  # from diff or cmp. Note that using "trap '' PIPE" is not possible
+  # because gzip changes its behavior (including exit status) if SIGPIPE
+  # is ignored.
+  test "$num" -eq 0 && continue
+  test "$num" -ge 128 \
+      && test "$(kill -l "$num" 2> /dev/null)" = "PIPE" \
+      && continue
+  exit 2
+done
+exit $cmp_status

miniconda3/bin/xzdiff

@@ -0,0 +1,224 @@
+#!/bin/sh
+# SPDX-License-Identifier: GPL-2.0-or-later
+
+# Copyright (C) 1998, 2002, 2006, 2007 Free Software Foundation
+# Copyright (C) 1993 Jean-loup Gailly
+
+# Modified for XZ Utils by Andrew Dudman and Lasse Collin.
+
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# shellcheck shell=sh disable=SC1003,SC2016
+
+
+#SET_PATH - This line is a placeholder to ease patching this script.
+
+# Instead of unsetting XZ_OPT, just make sure that xz will use file format
+# autodetection. This way memory usage limit and thread limit can be
+# specified via XZ_OPT. With gzip, bzip2, and lzop it's OK to just unset the
+# environment variables.
+xz='xz --format=auto'
+unset GZIP BZIP BZIP2 LZOP
+
+case ${0##*/} in
+  *cmp*) prog=xzcmp; cmp=${CMP:-cmp};;
+  *)     prog=xzdiff; cmp=${DIFF:-diff};;
+esac
+
+version="$prog (XZ Utils) 5.8.2"
+
+usage="Usage: ${0##*/} [OPTION]... FILE1 [FILE2]
+Compare FILE1 to FILE2, using their uncompressed contents if they are
+compressed.  If FILE2 is omitted, then the files compared are FILE1 and
+FILE1 from which the compression format suffix has been stripped.
+
+Do comparisons like '$cmp' does.  OPTIONs are the same as for '$cmp'.
+
+Report bugs to <xz@tukaani.org>."
+
+# sed script to escape all ' for the shell, and then (to handle trailing
+# newlines correctly) turn trailing X on last line into '.
+escape='
+  s/'\''/'\''\\'\'''\''/g
+  $s/X$/'\''/
+'
+
+while :; do
+  case $1 in
+    --h*) printf '%s\n' "$usage" || exit 2; exit;;
+    --v*) printf '%s\n' "$version" || exit 2; exit;;
+    --) shift; break;;
+    -*\'*) cmp="$cmp '"`printf '%sX\n' "$1" | sed "$escape"`;;
+    -?*) cmp="$cmp '$1'";;
+    *) break;;
+  esac
+  shift
+done
+cmp="$cmp --"
+
+for file; do
+  test "X$file" = X- || true < "$file" || exit 2
+done
+
+# xz needs -qQ to ignore warnings like unsupported check type.
+xz1="$xz -qQ"
+xz2="$xz -qQ"
+xz_status=0
+exec 3>&1
+
+if test $# -eq 1; then
+  case $1 in
+    *[-.]xz | *[-.]lzma | *[-.]lz | *.t[lx]z)
+      ;;
+    *[-.]bz2 | *.tbz | *.tbz2)
+      xz1=bzip2;;
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z)
+      xz1=gzip;;
+    *[-.]lzo | *.tzo)
+      xz1=lzop;;
+    *[-.]zst | *.tzst)
+      xz1='zstd -q';;
+    *[-.]lz4)
+      xz1=lz4;;
+    *)
+      printf '%s\n' "$0: $1: Unknown compressed file name suffix" >&2
+      exit 2;;
+  esac
+  # The FILE variable is used with eval, and shellcheck doesn't see that.
+  # shellcheck disable=SC2034
+  case $1 in
+    *[-.][zZ] | *_z | *[-.][gx]z | *[-.]bz2 | *[-.]lzma | *[-.]lz | *[-.]lzo | *[-.]zst | *[-.]lz4)
+      FILE=`expr "X$1" : 'X\(.*\)[-.][abglmostxzZ24]*$'`;;
+    *.t[abglx]z)
+      FILE=`expr "X$1" : 'X\(.*[-.]t\)[abglx]z$'`ar;;
+    *.tbz2)
+      FILE=`expr "X$1" : 'X\(.*[-.]t\)bz2$'`ar;;
+    *.tzo)
+      FILE=`expr "X$1" : 'X\(.*[-.]t\)zo$'`ar;;
+    *.tzst)
+      FILE=`expr "X$1" : 'X\(.*[-.]t\)zst$'`ar;;
+  esac
+  xz_status=$(
+    exec 4>&1
+    ($xz1 -cd -- "$1" 4>&-; echo $? >&4) 3>&- | eval "$cmp" - '"$FILE"' >&3
+  )
+elif test $# -eq 2; then
+  case $1 in
+    *[-.]bz2 | *.tbz | *.tbz2) xz1=bzip2;;
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z) xz1=gzip;;
+    *[-.]lzo | *.tzo) xz1=lzop;;
+    *[-.]zst | *.tzst) xz1='zstd -q';;
+    *[-.]lz4) xz1=lz4;;
+  esac
+  case $2 in
+    *[-.]bz2 | *.tbz | *.tbz2) xz2=bzip2;;
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z) xz2=gzip;;
+    *[-.]lzo | *.tzo) xz2=lzop;;
+    *[-.]zst | *.tzst) xz2='zstd -q';;
+    *[-.]lz4) xz2=lz4;;
+  esac
+  case $1 in
+    *[-.][zZ] | *_z | *[-.][gx]z | *[-.]bz2 | *[-.]lzma | *[-.]lz | *.t[abglx]z | *.tbz2 | *[-.]lzo | *.tzo | *[-.]zst | *.tzst | *[-.]lz4 | -)
+      case "$2" in
+        *[-.][zZ] | *_z | *[-.][gx]z | *[-.]bz2 | *[-.]lzma | *[-.]lz | *.t[abglx]z | *.tbz2 | *[-.]lzo | *.tzo | *[-.]zst | *.tzst | *[-.]lz4 | -)
+          if test "$1$2" = --; then
+            xz_status=$(
+              exec 4>&1
+              ($xz1 -cdf - 4>&-; echo $? >&4) 3>&- |
+                eval "$cmp" - - >&3
+            )
+          elif # Reject Solaris 8's buggy /bin/bash 2.03.
+              echo X | (echo X | eval "$cmp" /dev/fd/5 - >/dev/null 2>&1) 5<&0; then
+            # NOTE: xz_status will contain two numbers.
+            xz_status=$(
+              exec 4>&1
+              ($xz1 -cdf -- "$1" 4>&-; echo $? >&4) 3>&- |
+                ( ($xz2 -cdf -- "$2" 4>&-; echo $? >&4) 3>&- 5<&- </dev/null |
+                eval "$cmp" /dev/fd/5 - >&3) 5<&0
+            )
+          else
+            F=`expr "/$2" : '.*/\(.*\)[-.][ablmotxz2]*$'` || F=$prog
+            tmp=
+            trap '
+              test -n "$tmp" && rm -rf "$tmp"
+              (exit 2); exit 2
+            ' HUP INT PIPE TERM 0
+            if type mktemp >/dev/null 2>&1; then
+              # Note that FreeBSD's mktemp isn't fully compatible with
+              # the implementations from mktemp.org and GNU coreutils.
+              # It is important that the -t argument is the last argument
+              # and that no "--" is used between -t and the template argument.
+              # This way this command works on all implementations.
+              tmp=`mktemp -d -t "$prog.XXXXXXXXXX"` || exit 2
+            else
+              # Fallback code if mktemp is missing. This isn't as
+              # robust as using mktemp since this doesn't try with
+              # different file names in case of a file name conflict.
+              #
+              # There's no need to save the original umask since
+              # we don't create any non-temp files. Note that using
+              # mkdir -m 0077 isn't secure since some mkdir implementations
+              # create the dir with the default umask and chmod the
+              # the dir afterwards.
+              umask 0077
+              mkdir -- "${TMPDIR-/tmp}/$prog.$$" || exit 2
+              tmp="${TMPDIR-/tmp}/$prog.$$"
+            fi
+            $xz2 -cdf -- "$2" > "$tmp/$F" || exit 2
+            xz_status=$(
+              exec 4>&1
+              ($xz1 -cdf -- "$1" 4>&-; echo $? >&4) 3>&- |
+                eval "$cmp" - '"$tmp/$F"' >&3
+            )
+            cmp_status=$?
+            rm -rf "$tmp" || xz_status=$?
+            trap - HUP INT PIPE TERM 0
+            (exit $cmp_status)
+          fi;;
+      *)
+        xz_status=$(
+          exec 4>&1
+          ($xz1 -cdf -- "$1" 4>&-; echo $? >&4) 3>&- |
+            eval "$cmp" - '"$2"' >&3
+        );;
+    esac;;
+  *)
+    case "$2" in
+      *[-.][zZ] | *_z | *[-.][gx]z | *[-.]bz2 | *[-.]lzma | *[-.]lz | *.t[abglx]z | *.tbz2 | *[-.]lzo | *.tzo | *[-.]zst | *.tzst | *[-.]lz4 | -)
+        xz_status=$(
+          exec 4>&1
+          ($xz2 -cdf -- "$2" 4>&-; echo $? >&4) 3>&- |
+            eval "$cmp" '"$1"' - >&3
+         );;
+      *)
+        eval "$cmp" '"$1"' '"$2"';;
+    esac;;
+  esac
+else
+  printf '%s\n' "$0: Invalid number of operands; try '${0##*/} --help' for help" >&2
+  exit 2
+fi
+
+cmp_status=$?
+for num in $xz_status ; do
+  # 0 from decompressor means successful decompression. SIGPIPE from
+  # decompressor is possible when diff or cmp exits before the whole file
+  # has been decompressed. In that case we want to retain the exit status
+  # from diff or cmp. Note that using "trap '' PIPE" is not possible
+  # because gzip changes its behavior (including exit status) if SIGPIPE
+  # is ignored.
+  test "$num" -eq 0 && continue
+  test "$num" -ge 128 \
+      && test "$(kill -l "$num" 2> /dev/null)" = "PIPE" \
+      && continue
+  exit 2
+done
+exit $cmp_status

miniconda3/bin/xzegrep

@@ -0,0 +1,302 @@
+#!/bin/sh
+# SPDX-License-Identifier: GPL-2.0-or-later
+
+# xzgrep -- a wrapper around a grep program that decompresses files as needed
+# Adapted from a version sent by Charles Levert <charles@comm.polymtl.ca>
+
+# Copyright (C) 1998, 2001, 2002, 2006, 2007 Free Software Foundation
+# Copyright (C) 1993 Jean-loup Gailly
+
+# Modified for XZ Utils by Andrew Dudman and Lasse Collin.
+
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# shellcheck shell=sh disable=SC1003,SC2016
+
+
+#SET_PATH - This line is a placeholder to ease patching this script.
+
+# Instead of unsetting XZ_OPT, just make sure that xz will use file format
+# autodetection. This way memory usage limit and thread limit can be
+# specified via XZ_OPT. With gzip, bzip2, and lzop it's OK to just unset the
+# environment variables.
+xz='xz --format=auto'
+unset GZIP BZIP BZIP2 LZOP
+
+case ${0##*/} in
+  *egrep*) prog=xzegrep; grep=${GREP:-grep -E};;
+  *fgrep*) prog=xzfgrep; grep=${GREP:-grep -F};;
+  *)       prog=xzgrep; grep=${GREP:-grep};;
+esac
+
+version="$prog (XZ Utils) 5.8.2"
+
+usage="Usage: ${0##*/} [OPTION]... [-e] PATTERN [FILE]...
+Look for instances of PATTERN in the input FILEs, using their
+uncompressed contents if they are compressed.
+
+OPTIONs are the same as for '$grep'.
+
+Report bugs to <xz@tukaani.org>."
+
+# sed script to escape all ' for the shell, and then (to handle trailing
+# newlines correctly) turn trailing X on last line into '.
+escape='
+  s/'\''/'\''\\'\'''\''/g
+  $s/X$/'\''/
+'
+operands=
+have_pat=0
+files_with_matches=0
+files_without_matches=0
+no_filename=0
+with_filename=0
+
+# See if -H and --label options are supported (GNU and *BSDs).
+if test f:x = "$(eval "echo x | $grep -H --label=f x 2> /dev/null")"; then
+  grep_supports_label=1
+else
+  grep_supports_label=0
+fi
+
+while test $# -ne 0; do
+  option=$1
+  shift
+  optarg=
+
+  case $option in
+  (-[0123456789abcdEFGhHiIKlLnoPqrRsTuUvVwxyzZ]*[!0123456789]*)
+    # Something like -Fiv was specified, that is, $option contains more
+    # than one option of which the first option (in this example -F)
+    # doesn't take an argument. Split the first option into a standalone
+    # argument and continue parsing the rest of the options (in this example,
+    # replace -Fiv with -iv in the argument list and set option=-F).
+    #
+    # If there are digits [0-9] they are treated as if they were a single
+    # option character because this syntax is an alias for -C for GNU grep.
+    # For example, "grep -25F" is equivalent to "grep -C25 -F". If only
+    # digits are specified like "grep -25" we don't get here because the
+    # above pattern in the case-statement doesn't match such strings.
+    arg2=-\'$(LC_ALL=C expr "X${option}X" : 'X-.[0-9]*\(.*\)' |
+                LC_ALL=C sed "$escape")
+    eval "set -- $arg2 "'${1+"$@"}'
+    option=$(LC_ALL=C expr "X$option" : 'X\(-.[0-9]*\)');;
+  (--binary-*=* | --[lm]a*=* | --reg*=*)
+    # These options require an argument and an argument has been provided
+    # with the --foo=argument syntax. All is good.
+    ;;
+  (-[ABCDefmX] | --binary-* | --file | --[lm]a* | --reg*)
+    # These options require an argument which should now be in $1.
+    # If it isn't, display an error and exit.
+    case ${1?"$option option requires an argument"} in
+    (*\'*)
+      optarg=" '"$(printf '%sX\n' "$1" | LC_ALL=C sed "$escape");;
+    (*)
+      optarg=" '$1'";;
+    esac
+    shift;;
+  (--)
+    break;;
+  (-?*)
+    ;;
+  (*)
+    case $option in
+    (*\'*)
+      operands="$operands '"$(printf '%sX\n' "$option" |
+                                LC_ALL=C sed "$escape");;
+    (*)
+      operands="$operands '$option'";;
+    esac
+    ${POSIXLY_CORRECT+break}
+    continue;;
+  esac
+
+  case $option in
+  (-[drRzZ] | --di* | --exc* | --inc* | --rec* | --nu*)
+    printf >&2 '%s: %s: Option not supported\n' "$0" "$option"
+    exit 2;;
+  (-[ef]* | --file | --file=* | --reg*)
+    have_pat=1;;
+  (--h | --he | --hel | --help)
+    printf '%s\n' "$usage" || exit 2
+    exit;;
+  (-H | --wi | --wit | --with | --with- | --with-f | --with-fi \
+  | --with-fil | --with-file | --with-filen | --with-filena | --with-filenam \
+  | --with-filename)
+    with_filename=1
+    continue;;
+  (-l | --files-with-*)
+    files_with_matches=1
+    continue;;
+  (-L | --files-witho*)
+    files_without_matches=1
+    continue;;
+  (-h | --no-f*)
+    no_filename=1;;
+  (-V | --v | --ve | --ver | --vers | --versi | --versio | --version)
+    printf '%s\n' "$version" || exit 2
+    exit;;
+  esac
+
+  case $option in
+  (*\'?*)
+    option=\'$(printf '%sX\n' "$option" | LC_ALL=C sed "$escape");;
+  (*)
+    option="'$option'";;
+  esac
+
+  grep="$grep $option$optarg"
+done
+
+eval "set -- $operands "'${1+"$@"}'
+
+if test $have_pat -eq 0; then
+  case ${1?"Missing pattern; try '${0##*/} --help' for help"} in
+  (*\'*)
+    grep="$grep -e '"$(printf '%sX\n' "$1" | LC_ALL=C sed "$escape");;
+  (*)
+    grep="$grep -e '$1'";;
+  esac
+  shift
+fi
+
+if test $# -eq 0; then
+  set -- -
+fi
+
+exec 3>&1
+
+# res=1 means that no file matched yet
+res=1
+
+for i; do
+  case $i in
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z) uncompress="gzip -cdf";;
+    *[-.]bz2 | *[-.]tbz | *.tbz2) uncompress="bzip2 -cdf";;
+    *[-.]lzo | *[-.]tzo) uncompress="lzop -cdf";;
+    *[-.]zst | *[-.]tzst) uncompress="zstd -cdfq";; # zstd needs -q.
+    *[-.]lz4) uncompress="lz4 -cdf";;
+    *) uncompress="$xz -cdfqQ";; # -qQ to ignore warnings like unsupp. check.
+  esac
+  # xz_status will hold the decompressor's exit status.
+  # Exit status of grep (and in rare cases, printf or sed) is
+  # available as the exit status of this assignment command.
+  xz_status=$(
+    exec 5>&1
+    ($uncompress -- "$i" 5>&-; echo $? >&5) 3>&- |
+    if test $files_with_matches -eq 1; then
+      eval "$grep -q" && { printf '%s\n' "$i" || exit 2; }
+    elif test $files_without_matches -eq 1; then
+      eval "$grep -q" || {
+        r=$?
+        if test $r -eq 1; then
+          printf '%s\n' "$i" || r=2
+        fi
+        exit $r
+      }
+    elif test $with_filename -eq 0 &&
+         { test $# -eq 1 || test $no_filename -eq 1; }; then
+      eval "$grep"
+    elif test $grep_supports_label -eq 1; then
+      # The grep implementation in use allows us to specify the filename
+      # that grep will prefix to the output lines. This is faster and
+      # less prone to security bugs than the fallback method that uses sed.
+      # This also avoids confusing output with GNU grep >= 3.5 (2020-09-27)
+      # which prints "binary file matches" to stderr instead of stdout.
+      #
+      # If reading from stdin, let grep use whatever name it prefers for
+      # stdin. With GNU grep it is a locale-specific translated string.
+      if test "x$i" = "x-"; then
+        eval "$grep -H"
+      else
+        eval "$grep -H --label \"\$i\""
+      fi
+    else
+      # Append a colon so that the last character will never be a newline
+      # which would otherwise get lost in shell command substitution.
+      i="$i:"
+
+      # Escape & \ | and newlines only if such characters are present
+      # (speed optimization).
+      case $i in
+      (*'
+'* | *'&'* | *'\'* | *'|'*)
+        # If sed fails, set i to a known safe string to ensure that
+        # failing sed did not create a half-escaped dangerous string.
+        i=$(printf '%s\n' "$i" | LC_ALL=C sed 's/[&\|]/\\&/g; $!s/$/\\/') ||
+            i='(unknown filename):';;
+      esac
+
+      # $i already ends with a colon so do not add it here.
+      sed_script="s|^|$i|"
+
+      # If grep or sed fails, pick the larger value of the two exit statuses.
+      # If sed fails, use at least 2 since we use >= 2 to indicate errors.
+      r=$(
+        exec 4>&1
+        (eval "$grep" 4>&-; echo $? >&4) 3>&- |
+            LC_ALL=C sed "$sed_script" >&3 4>&-
+      ) || {
+        sed_status=$?
+        test "$sed_status" -lt 2 && sed_status=2
+        test "$r" -lt "$sed_status" && r=$sed_status
+      }
+      exit $r
+    fi >&3 5>&-
+  )
+  r=$?
+
+  # If grep or sed or other non-decompression command failed with a signal,
+  # exit immediately and ignore the possible remaining files.
+  #
+  # NOTE: Instead of 128 + signal_number, some shells use
+  # 256 + signal_number (ksh) or 384 + signal_number (yash).
+  # This is fine for us since their "exit" and "kill -l" commands take
+  # this into account. (At least the versions I tried do but there is
+  # a report of an old ksh variant whose "exit" truncates the exit status
+  # to 8 bits without any special handling for values indicating a signal.)
+  test "$r" -ge 128 && exit "$r"
+
+  if test -z "$xz_status"; then
+    # Something unusual happened, for example, we got a signal and
+    # the exit status of the decompressor was never echoed and thus
+    # $xz_status is empty. Exit immediately and ignore the possible
+    # remaining files.
+    exit 2
+  elif test "$xz_status" -ge 128; then
+    # The decompressor died due to a signal. SIGPIPE is ignored since it can
+    # occur if grep exits before the whole file has been decompressed (grep -q
+    # can do that). If the decompressor died with some other signal, exit
+    # immediately and ignore the possible remaining files.
+    test "$(kill -l "$xz_status" 2> /dev/null)" != "PIPE" && exit "$xz_status"
+  elif test "$xz_status" -gt 0; then
+    # Decompression failed but we will continue with the remaining
+    # files anyway. Set exit status to at least 2 to indicate an error.
+    test "$r" -lt 2 && r=2
+  fi
+
+  # Since res=1 is the initial value, we only need to care about
+  # matches (r == 0) and errors (r >= 2) here; r == 1 can be ignored.
+  if test "$r" -ge 2; then
+    # An error occurred in decompressor, grep, or some other command. Update
+    # res unless a larger error code has been seen with an earlier file.
+    test "$res" -lt "$r" && res=$r
+  elif test "$r" -eq 0; then
+    # grep found a match and no errors occurred. Update res if no errors have
+    # occurred with earlier files.
+    test "$res" -eq 1 && res=0
+  fi
+done
+
+# 0: At least one file matched and no errors occurred.
+# 1: No matches were found and no errors occurred.
+# >=2: Error. It's unknown if matches were found.
+exit "$res"

miniconda3/bin/xzfgrep

@@ -0,0 +1,302 @@
+#!/bin/sh
+# SPDX-License-Identifier: GPL-2.0-or-later
+
+# xzgrep -- a wrapper around a grep program that decompresses files as needed
+# Adapted from a version sent by Charles Levert <charles@comm.polymtl.ca>
+
+# Copyright (C) 1998, 2001, 2002, 2006, 2007 Free Software Foundation
+# Copyright (C) 1993 Jean-loup Gailly
+
+# Modified for XZ Utils by Andrew Dudman and Lasse Collin.
+
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# shellcheck shell=sh disable=SC1003,SC2016
+
+
+#SET_PATH - This line is a placeholder to ease patching this script.
+
+# Instead of unsetting XZ_OPT, just make sure that xz will use file format
+# autodetection. This way memory usage limit and thread limit can be
+# specified via XZ_OPT. With gzip, bzip2, and lzop it's OK to just unset the
+# environment variables.
+xz='xz --format=auto'
+unset GZIP BZIP BZIP2 LZOP
+
+case ${0##*/} in
+  *egrep*) prog=xzegrep; grep=${GREP:-grep -E};;
+  *fgrep*) prog=xzfgrep; grep=${GREP:-grep -F};;
+  *)       prog=xzgrep; grep=${GREP:-grep};;
+esac
+
+version="$prog (XZ Utils) 5.8.2"
+
+usage="Usage: ${0##*/} [OPTION]... [-e] PATTERN [FILE]...
+Look for instances of PATTERN in the input FILEs, using their
+uncompressed contents if they are compressed.
+
+OPTIONs are the same as for '$grep'.
+
+Report bugs to <xz@tukaani.org>."
+
+# sed script to escape all ' for the shell, and then (to handle trailing
+# newlines correctly) turn trailing X on last line into '.
+escape='
+  s/'\''/'\''\\'\'''\''/g
+  $s/X$/'\''/
+'
+operands=
+have_pat=0
+files_with_matches=0
+files_without_matches=0
+no_filename=0
+with_filename=0
+
+# See if -H and --label options are supported (GNU and *BSDs).
+if test f:x = "$(eval "echo x | $grep -H --label=f x 2> /dev/null")"; then
+  grep_supports_label=1
+else
+  grep_supports_label=0
+fi
+
+while test $# -ne 0; do
+  option=$1
+  shift
+  optarg=
+
+  case $option in
+  (-[0123456789abcdEFGhHiIKlLnoPqrRsTuUvVwxyzZ]*[!0123456789]*)
+    # Something like -Fiv was specified, that is, $option contains more
+    # than one option of which the first option (in this example -F)
+    # doesn't take an argument. Split the first option into a standalone
+    # argument and continue parsing the rest of the options (in this example,
+    # replace -Fiv with -iv in the argument list and set option=-F).
+    #
+    # If there are digits [0-9] they are treated as if they were a single
+    # option character because this syntax is an alias for -C for GNU grep.
+    # For example, "grep -25F" is equivalent to "grep -C25 -F". If only
+    # digits are specified like "grep -25" we don't get here because the
+    # above pattern in the case-statement doesn't match such strings.
+    arg2=-\'$(LC_ALL=C expr "X${option}X" : 'X-.[0-9]*\(.*\)' |
+                LC_ALL=C sed "$escape")
+    eval "set -- $arg2 "'${1+"$@"}'
+    option=$(LC_ALL=C expr "X$option" : 'X\(-.[0-9]*\)');;
+  (--binary-*=* | --[lm]a*=* | --reg*=*)
+    # These options require an argument and an argument has been provided
+    # with the --foo=argument syntax. All is good.
+    ;;
+  (-[ABCDefmX] | --binary-* | --file | --[lm]a* | --reg*)
+    # These options require an argument which should now be in $1.
+    # If it isn't, display an error and exit.
+    case ${1?"$option option requires an argument"} in
+    (*\'*)
+      optarg=" '"$(printf '%sX\n' "$1" | LC_ALL=C sed "$escape");;
+    (*)
+      optarg=" '$1'";;
+    esac
+    shift;;
+  (--)
+    break;;
+  (-?*)
+    ;;
+  (*)
+    case $option in
+    (*\'*)
+      operands="$operands '"$(printf '%sX\n' "$option" |
+                                LC_ALL=C sed "$escape");;
+    (*)
+      operands="$operands '$option'";;
+    esac
+    ${POSIXLY_CORRECT+break}
+    continue;;
+  esac
+
+  case $option in
+  (-[drRzZ] | --di* | --exc* | --inc* | --rec* | --nu*)
+    printf >&2 '%s: %s: Option not supported\n' "$0" "$option"
+    exit 2;;
+  (-[ef]* | --file | --file=* | --reg*)
+    have_pat=1;;
+  (--h | --he | --hel | --help)
+    printf '%s\n' "$usage" || exit 2
+    exit;;
+  (-H | --wi | --wit | --with | --with- | --with-f | --with-fi \
+  | --with-fil | --with-file | --with-filen | --with-filena | --with-filenam \
+  | --with-filename)
+    with_filename=1
+    continue;;
+  (-l | --files-with-*)
+    files_with_matches=1
+    continue;;
+  (-L | --files-witho*)
+    files_without_matches=1
+    continue;;
+  (-h | --no-f*)
+    no_filename=1;;
+  (-V | --v | --ve | --ver | --vers | --versi | --versio | --version)
+    printf '%s\n' "$version" || exit 2
+    exit;;
+  esac
+
+  case $option in
+  (*\'?*)
+    option=\'$(printf '%sX\n' "$option" | LC_ALL=C sed "$escape");;
+  (*)
+    option="'$option'";;
+  esac
+
+  grep="$grep $option$optarg"
+done
+
+eval "set -- $operands "'${1+"$@"}'
+
+if test $have_pat -eq 0; then
+  case ${1?"Missing pattern; try '${0##*/} --help' for help"} in
+  (*\'*)
+    grep="$grep -e '"$(printf '%sX\n' "$1" | LC_ALL=C sed "$escape");;
+  (*)
+    grep="$grep -e '$1'";;
+  esac
+  shift
+fi
+
+if test $# -eq 0; then
+  set -- -
+fi
+
+exec 3>&1
+
+# res=1 means that no file matched yet
+res=1
+
+for i; do
+  case $i in
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z) uncompress="gzip -cdf";;
+    *[-.]bz2 | *[-.]tbz | *.tbz2) uncompress="bzip2 -cdf";;
+    *[-.]lzo | *[-.]tzo) uncompress="lzop -cdf";;
+    *[-.]zst | *[-.]tzst) uncompress="zstd -cdfq";; # zstd needs -q.
+    *[-.]lz4) uncompress="lz4 -cdf";;
+    *) uncompress="$xz -cdfqQ";; # -qQ to ignore warnings like unsupp. check.
+  esac
+  # xz_status will hold the decompressor's exit status.
+  # Exit status of grep (and in rare cases, printf or sed) is
+  # available as the exit status of this assignment command.
+  xz_status=$(
+    exec 5>&1
+    ($uncompress -- "$i" 5>&-; echo $? >&5) 3>&- |
+    if test $files_with_matches -eq 1; then
+      eval "$grep -q" && { printf '%s\n' "$i" || exit 2; }
+    elif test $files_without_matches -eq 1; then
+      eval "$grep -q" || {
+        r=$?
+        if test $r -eq 1; then
+          printf '%s\n' "$i" || r=2
+        fi
+        exit $r
+      }
+    elif test $with_filename -eq 0 &&
+         { test $# -eq 1 || test $no_filename -eq 1; }; then
+      eval "$grep"
+    elif test $grep_supports_label -eq 1; then
+      # The grep implementation in use allows us to specify the filename
+      # that grep will prefix to the output lines. This is faster and
+      # less prone to security bugs than the fallback method that uses sed.
+      # This also avoids confusing output with GNU grep >= 3.5 (2020-09-27)
+      # which prints "binary file matches" to stderr instead of stdout.
+      #
+      # If reading from stdin, let grep use whatever name it prefers for
+      # stdin. With GNU grep it is a locale-specific translated string.
+      if test "x$i" = "x-"; then
+        eval "$grep -H"
+      else
+        eval "$grep -H --label \"\$i\""
+      fi
+    else
+      # Append a colon so that the last character will never be a newline
+      # which would otherwise get lost in shell command substitution.
+      i="$i:"
+
+      # Escape & \ | and newlines only if such characters are present
+      # (speed optimization).
+      case $i in
+      (*'
+'* | *'&'* | *'\'* | *'|'*)
+        # If sed fails, set i to a known safe string to ensure that
+        # failing sed did not create a half-escaped dangerous string.
+        i=$(printf '%s\n' "$i" | LC_ALL=C sed 's/[&\|]/\\&/g; $!s/$/\\/') ||
+            i='(unknown filename):';;
+      esac
+
+      # $i already ends with a colon so do not add it here.
+      sed_script="s|^|$i|"
+
+      # If grep or sed fails, pick the larger value of the two exit statuses.
+      # If sed fails, use at least 2 since we use >= 2 to indicate errors.
+      r=$(
+        exec 4>&1
+        (eval "$grep" 4>&-; echo $? >&4) 3>&- |
+            LC_ALL=C sed "$sed_script" >&3 4>&-
+      ) || {
+        sed_status=$?
+        test "$sed_status" -lt 2 && sed_status=2
+        test "$r" -lt "$sed_status" && r=$sed_status
+      }
+      exit $r
+    fi >&3 5>&-
+  )
+  r=$?
+
+  # If grep or sed or other non-decompression command failed with a signal,
+  # exit immediately and ignore the possible remaining files.
+  #
+  # NOTE: Instead of 128 + signal_number, some shells use
+  # 256 + signal_number (ksh) or 384 + signal_number (yash).
+  # This is fine for us since their "exit" and "kill -l" commands take
+  # this into account. (At least the versions I tried do but there is
+  # a report of an old ksh variant whose "exit" truncates the exit status
+  # to 8 bits without any special handling for values indicating a signal.)
+  test "$r" -ge 128 && exit "$r"
+
+  if test -z "$xz_status"; then
+    # Something unusual happened, for example, we got a signal and
+    # the exit status of the decompressor was never echoed and thus
+    # $xz_status is empty. Exit immediately and ignore the possible
+    # remaining files.
+    exit 2
+  elif test "$xz_status" -ge 128; then
+    # The decompressor died due to a signal. SIGPIPE is ignored since it can
+    # occur if grep exits before the whole file has been decompressed (grep -q
+    # can do that). If the decompressor died with some other signal, exit
+    # immediately and ignore the possible remaining files.
+    test "$(kill -l "$xz_status" 2> /dev/null)" != "PIPE" && exit "$xz_status"
+  elif test "$xz_status" -gt 0; then
+    # Decompression failed but we will continue with the remaining
+    # files anyway. Set exit status to at least 2 to indicate an error.
+    test "$r" -lt 2 && r=2
+  fi
+
+  # Since res=1 is the initial value, we only need to care about
+  # matches (r == 0) and errors (r >= 2) here; r == 1 can be ignored.
+  if test "$r" -ge 2; then
+    # An error occurred in decompressor, grep, or some other command. Update
+    # res unless a larger error code has been seen with an earlier file.
+    test "$res" -lt "$r" && res=$r
+  elif test "$r" -eq 0; then
+    # grep found a match and no errors occurred. Update res if no errors have
+    # occurred with earlier files.
+    test "$res" -eq 1 && res=0
+  fi
+done
+
+# 0: At least one file matched and no errors occurred.
+# 1: No matches were found and no errors occurred.
+# >=2: Error. It's unknown if matches were found.
+exit "$res"

miniconda3/bin/xzgrep

@@ -0,0 +1,302 @@
+#!/bin/sh
+# SPDX-License-Identifier: GPL-2.0-or-later
+
+# xzgrep -- a wrapper around a grep program that decompresses files as needed
+# Adapted from a version sent by Charles Levert <charles@comm.polymtl.ca>
+
+# Copyright (C) 1998, 2001, 2002, 2006, 2007 Free Software Foundation
+# Copyright (C) 1993 Jean-loup Gailly
+
+# Modified for XZ Utils by Andrew Dudman and Lasse Collin.
+
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# shellcheck shell=sh disable=SC1003,SC2016
+
+
+#SET_PATH - This line is a placeholder to ease patching this script.
+
+# Instead of unsetting XZ_OPT, just make sure that xz will use file format
+# autodetection. This way memory usage limit and thread limit can be
+# specified via XZ_OPT. With gzip, bzip2, and lzop it's OK to just unset the
+# environment variables.
+xz='xz --format=auto'
+unset GZIP BZIP BZIP2 LZOP
+
+case ${0##*/} in
+  *egrep*) prog=xzegrep; grep=${GREP:-grep -E};;
+  *fgrep*) prog=xzfgrep; grep=${GREP:-grep -F};;
+  *)       prog=xzgrep; grep=${GREP:-grep};;
+esac
+
+version="$prog (XZ Utils) 5.8.2"
+
+usage="Usage: ${0##*/} [OPTION]... [-e] PATTERN [FILE]...
+Look for instances of PATTERN in the input FILEs, using their
+uncompressed contents if they are compressed.
+
+OPTIONs are the same as for '$grep'.
+
+Report bugs to <xz@tukaani.org>."
+
+# sed script to escape all ' for the shell, and then (to handle trailing
+# newlines correctly) turn trailing X on last line into '.
+escape='
+  s/'\''/'\''\\'\'''\''/g
+  $s/X$/'\''/
+'
+operands=
+have_pat=0
+files_with_matches=0
+files_without_matches=0
+no_filename=0
+with_filename=0
+
+# See if -H and --label options are supported (GNU and *BSDs).
+if test f:x = "$(eval "echo x | $grep -H --label=f x 2> /dev/null")"; then
+  grep_supports_label=1
+else
+  grep_supports_label=0
+fi
+
+while test $# -ne 0; do
+  option=$1
+  shift
+  optarg=
+
+  case $option in
+  (-[0123456789abcdEFGhHiIKlLnoPqrRsTuUvVwxyzZ]*[!0123456789]*)
+    # Something like -Fiv was specified, that is, $option contains more
+    # than one option of which the first option (in this example -F)
+    # doesn't take an argument. Split the first option into a standalone
+    # argument and continue parsing the rest of the options (in this example,
+    # replace -Fiv with -iv in the argument list and set option=-F).
+    #
+    # If there are digits [0-9] they are treated as if they were a single
+    # option character because this syntax is an alias for -C for GNU grep.
+    # For example, "grep -25F" is equivalent to "grep -C25 -F". If only
+    # digits are specified like "grep -25" we don't get here because the
+    # above pattern in the case-statement doesn't match such strings.
+    arg2=-\'$(LC_ALL=C expr "X${option}X" : 'X-.[0-9]*\(.*\)' |
+                LC_ALL=C sed "$escape")
+    eval "set -- $arg2 "'${1+"$@"}'
+    option=$(LC_ALL=C expr "X$option" : 'X\(-.[0-9]*\)');;
+  (--binary-*=* | --[lm]a*=* | --reg*=*)
+    # These options require an argument and an argument has been provided
+    # with the --foo=argument syntax. All is good.
+    ;;
+  (-[ABCDefmX] | --binary-* | --file | --[lm]a* | --reg*)
+    # These options require an argument which should now be in $1.
+    # If it isn't, display an error and exit.
+    case ${1?"$option option requires an argument"} in
+    (*\'*)
+      optarg=" '"$(printf '%sX\n' "$1" | LC_ALL=C sed "$escape");;
+    (*)
+      optarg=" '$1'";;
+    esac
+    shift;;
+  (--)
+    break;;
+  (-?*)
+    ;;
+  (*)
+    case $option in
+    (*\'*)
+      operands="$operands '"$(printf '%sX\n' "$option" |
+                                LC_ALL=C sed "$escape");;
+    (*)
+      operands="$operands '$option'";;
+    esac
+    ${POSIXLY_CORRECT+break}
+    continue;;
+  esac
+
+  case $option in
+  (-[drRzZ] | --di* | --exc* | --inc* | --rec* | --nu*)
+    printf >&2 '%s: %s: Option not supported\n' "$0" "$option"
+    exit 2;;
+  (-[ef]* | --file | --file=* | --reg*)
+    have_pat=1;;
+  (--h | --he | --hel | --help)
+    printf '%s\n' "$usage" || exit 2
+    exit;;
+  (-H | --wi | --wit | --with | --with- | --with-f | --with-fi \
+  | --with-fil | --with-file | --with-filen | --with-filena | --with-filenam \
+  | --with-filename)
+    with_filename=1
+    continue;;
+  (-l | --files-with-*)
+    files_with_matches=1
+    continue;;
+  (-L | --files-witho*)
+    files_without_matches=1
+    continue;;
+  (-h | --no-f*)
+    no_filename=1;;
+  (-V | --v | --ve | --ver | --vers | --versi | --versio | --version)
+    printf '%s\n' "$version" || exit 2
+    exit;;
+  esac
+
+  case $option in
+  (*\'?*)
+    option=\'$(printf '%sX\n' "$option" | LC_ALL=C sed "$escape");;
+  (*)
+    option="'$option'";;
+  esac
+
+  grep="$grep $option$optarg"
+done
+
+eval "set -- $operands "'${1+"$@"}'
+
+if test $have_pat -eq 0; then
+  case ${1?"Missing pattern; try '${0##*/} --help' for help"} in
+  (*\'*)
+    grep="$grep -e '"$(printf '%sX\n' "$1" | LC_ALL=C sed "$escape");;
+  (*)
+    grep="$grep -e '$1'";;
+  esac
+  shift
+fi
+
+if test $# -eq 0; then
+  set -- -
+fi
+
+exec 3>&1
+
+# res=1 means that no file matched yet
+res=1
+
+for i; do
+  case $i in
+    *[-.][zZ] | *_z | *[-.]gz | *.t[ag]z) uncompress="gzip -cdf";;
+    *[-.]bz2 | *[-.]tbz | *.tbz2) uncompress="bzip2 -cdf";;
+    *[-.]lzo | *[-.]tzo) uncompress="lzop -cdf";;
+    *[-.]zst | *[-.]tzst) uncompress="zstd -cdfq";; # zstd needs -q.
+    *[-.]lz4) uncompress="lz4 -cdf";;
+    *) uncompress="$xz -cdfqQ";; # -qQ to ignore warnings like unsupp. check.
+  esac
+  # xz_status will hold the decompressor's exit status.
+  # Exit status of grep (and in rare cases, printf or sed) is
+  # available as the exit status of this assignment command.
+  xz_status=$(
+    exec 5>&1
+    ($uncompress -- "$i" 5>&-; echo $? >&5) 3>&- |
+    if test $files_with_matches -eq 1; then
+      eval "$grep -q" && { printf '%s\n' "$i" || exit 2; }
+    elif test $files_without_matches -eq 1; then
+      eval "$grep -q" || {
+        r=$?
+        if test $r -eq 1; then
+          printf '%s\n' "$i" || r=2
+        fi
+        exit $r
+      }
+    elif test $with_filename -eq 0 &&
+         { test $# -eq 1 || test $no_filename -eq 1; }; then
+      eval "$grep"
+    elif test $grep_supports_label -eq 1; then
+      # The grep implementation in use allows us to specify the filename
+      # that grep will prefix to the output lines. This is faster and
+      # less prone to security bugs than the fallback method that uses sed.
+      # This also avoids confusing output with GNU grep >= 3.5 (2020-09-27)
+      # which prints "binary file matches" to stderr instead of stdout.
+      #
+      # If reading from stdin, let grep use whatever name it prefers for
+      # stdin. With GNU grep it is a locale-specific translated string.
+      if test "x$i" = "x-"; then
+        eval "$grep -H"
+      else
+        eval "$grep -H --label \"\$i\""
+      fi
+    else
+      # Append a colon so that the last character will never be a newline
+      # which would otherwise get lost in shell command substitution.
+      i="$i:"
+
+      # Escape & \ | and newlines only if such characters are present
+      # (speed optimization).
+      case $i in
+      (*'
+'* | *'&'* | *'\'* | *'|'*)
+        # If sed fails, set i to a known safe string to ensure that
+        # failing sed did not create a half-escaped dangerous string.
+        i=$(printf '%s\n' "$i" | LC_ALL=C sed 's/[&\|]/\\&/g; $!s/$/\\/') ||
+            i='(unknown filename):';;
+      esac
+
+      # $i already ends with a colon so do not add it here.
+      sed_script="s|^|$i|"
+
+      # If grep or sed fails, pick the larger value of the two exit statuses.
+      # If sed fails, use at least 2 since we use >= 2 to indicate errors.
+      r=$(
+        exec 4>&1
+        (eval "$grep" 4>&-; echo $? >&4) 3>&- |
+            LC_ALL=C sed "$sed_script" >&3 4>&-
+      ) || {
+        sed_status=$?
+        test "$sed_status" -lt 2 && sed_status=2
+        test "$r" -lt "$sed_status" && r=$sed_status
+      }
+      exit $r
+    fi >&3 5>&-
+  )
+  r=$?
+
+  # If grep or sed or other non-decompression command failed with a signal,
+  # exit immediately and ignore the possible remaining files.
+  #
+  # NOTE: Instead of 128 + signal_number, some shells use
+  # 256 + signal_number (ksh) or 384 + signal_number (yash).
+  # This is fine for us since their "exit" and "kill -l" commands take
+  # this into account. (At least the versions I tried do but there is
+  # a report of an old ksh variant whose "exit" truncates the exit status
+  # to 8 bits without any special handling for values indicating a signal.)
+  test "$r" -ge 128 && exit "$r"
+
+  if test -z "$xz_status"; then
+    # Something unusual happened, for example, we got a signal and
+    # the exit status of the decompressor was never echoed and thus
+    # $xz_status is empty. Exit immediately and ignore the possible
+    # remaining files.
+    exit 2
+  elif test "$xz_status" -ge 128; then
+    # The decompressor died due to a signal. SIGPIPE is ignored since it can
+    # occur if grep exits before the whole file has been decompressed (grep -q
+    # can do that). If the decompressor died with some other signal, exit
+    # immediately and ignore the possible remaining files.
+    test "$(kill -l "$xz_status" 2> /dev/null)" != "PIPE" && exit "$xz_status"
+  elif test "$xz_status" -gt 0; then
+    # Decompression failed but we will continue with the remaining
+    # files anyway. Set exit status to at least 2 to indicate an error.
+    test "$r" -lt 2 && r=2
+  fi
+
+  # Since res=1 is the initial value, we only need to care about
+  # matches (r == 0) and errors (r >= 2) here; r == 1 can be ignored.
+  if test "$r" -ge 2; then
+    # An error occurred in decompressor, grep, or some other command. Update
+    # res unless a larger error code has been seen with an earlier file.
+    test "$res" -lt "$r" && res=$r
+  elif test "$r" -eq 0; then
+    # grep found a match and no errors occurred. Update res if no errors have
+    # occurred with earlier files.
+    test "$res" -eq 1 && res=0
+  fi
+done
+
+# 0: At least one file matched and no errors occurred.
+# 1: No matches were found and no errors occurred.
+# >=2: Error. It's unknown if matches were found.
+exit "$res"

miniconda3/bin/xzless

@@ -0,0 +1,76 @@
+#!/bin/sh
+# SPDX-License-Identifier: GPL-2.0-or-later
+
+# Copyright (C) 1998, 2002, 2006, 2007 Free Software Foundation
+
+# The original version for gzip was written by Paul Eggert.
+# Modified for XZ Utils by Andrew Dudman and Lasse Collin.
+
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# shellcheck shell=sh disable=SC2089,SC2090
+
+
+#SET_PATH - This line is a placeholder to ease patching this script.
+
+# Instead of unsetting XZ_OPT, just make sure that xz will use file format
+# autodetection. This way memory usage limit and thread limit can be
+# specified via XZ_OPT.
+xz='xz --format=auto'
+
+version='xzless (XZ Utils) 5.8.2'
+
+usage="Usage: ${0##*/} [OPTION]... [FILE]...
+Like 'less', but operate on the uncompressed contents of xz compressed FILEs.
+
+Options are the same as for 'less'.
+
+Report bugs to <xz@tukaani.org>."
+
+case $1 in
+	--help)    printf '%s\n' "$usage" || exit 2; exit;;
+	--version) printf '%s\n' "$version" || exit 2; exit;;
+esac
+
+if test "${LESSMETACHARS+set}" != set; then
+	# Work around a bug in less 394 and earlier;
+	# it mishandles the metacharacters '$%=~'.
+	space=' '
+	tab='	'
+	nl='
+'
+	LESSMETACHARS="$space$tab$nl'"';*?"()<>[|&^`#\$%=~'
+fi
+
+VER=$(less -V | { read _ ver _ && echo ${ver%%.*}; })
+if test "$VER" -ge 451; then
+	# less 451 or later: If the compressed file is valid but has
+	# zero bytes of uncompressed data, using two vertical bars ||- makes
+	# "less" check the exit status of xz and if it is zero then display
+	# an empty file. With a single vertical bar |- and no output from xz,
+	# "less" would attempt to display the raw input file instead.
+	LESSOPEN="||-$xz -cdfqQ -- %s"
+elif test "$VER" -ge 429; then
+	# less 429 or later: LESSOPEN pipe will be used on
+	# standard input if $LESSOPEN begins with |-.
+	LESSOPEN="|-$xz -cdfqQ -- %s"
+else
+	LESSOPEN="|$xz -cdfqQ -- %s"
+fi
+
+SHOW_PREPROC_ERRORS=
+if test "$VER" -ge 632; then
+	SHOW_PREPROC_ERRORS=--show-preproc-errors
+fi
+
+export LESSMETACHARS LESSOPEN
+
+exec less $SHOW_PREPROC_ERRORS "$@"

miniconda3/bin/xzmore

@@ -0,0 +1,82 @@
+#!/bin/sh
+# SPDX-License-Identifier: GPL-2.0-or-later
+
+# Copyright (C) 2001, 2002, 2007 Free Software Foundation
+# Copyright (C) 1992, 1993 Jean-loup Gailly
+
+# Modified for XZ Utils by Andrew Dudman and Lasse Collin.
+
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+
+# shellcheck shell=sh
+
+
+#SET_PATH - This line is a placeholder to ease patching this script.
+
+# Instead of unsetting XZ_OPT, just make sure that xz will use file format
+# autodetection. This way memory usage limit and thread limit can be
+# specified via XZ_OPT.
+xz='xz --format=auto'
+
+version='xzmore (XZ Utils) 5.8.2'
+
+usage="Usage: ${0##*/} [OPTION]... [FILE]...
+Like 'more', but operate on the uncompressed contents of xz compressed FILEs.
+
+Report bugs to <xz@tukaani.org>."
+
+case $1 in
+	--help)    printf '%s\n' "$usage" || exit 2; exit;;
+	--version) printf '%s\n' "$version" || exit 2; exit;;
+esac
+
+oldtty=`stty -g 2>/dev/null`
+if stty -cbreak 2>/dev/null; then
+	cb='cbreak'; ncb='-cbreak'
+else
+	# 'stty min 1' resets eof to ^a on both SunOS and SysV!
+	cb='min 1 -icanon'; ncb='icanon eof ^d'
+fi
+if test $? -eq 0 && test -n "$oldtty"; then
+	trap 'stty $oldtty 2>/dev/null; exit' 0 2 3 5 10 13 15
+else
+	trap 'stty $ncb echo 2>/dev/null; exit' 0 2 3 5 10 13 15
+fi
+
+if test $# = 0; then
+	if test -t 0; then
+		printf '%s\n' "$usage"; exit 1
+	else
+		$xz -cdfqQ | eval "${PAGER:-more}"
+	fi
+else
+	FIRST=1
+	for FILE; do
+		true < "$FILE" || continue
+		if test $FIRST -eq 0; then
+			printf "%s--More--(Next file: %s)" "" "$FILE"
+			stty $cb -echo 2>/dev/null
+			ANS=`dd bs=1 count=1 2>/dev/null`
+			stty $ncb echo 2>/dev/null
+			echo " "
+			case "$ANS" in
+				[eq]) exit;;
+			esac
+		fi
+		if test "$ANS" != 's'; then
+			printf '%s\n' "------> $FILE <------"
+			$xz -cdfqQ -- "$FILE" | eval "${PAGER:-more}"
+		fi
+		if test -t 1; then
+			FIRST=0
+		fi
+	done
+fi

miniconda3/bin/zstdgrep

@@ -0,0 +1,134 @@
+#!/bin/sh
+#
+# Copyright (c) 2003 Thomas Klausner.
+#
+# Redistribution and use in source and binary forms, with or without
+# modification, are permitted provided that the following conditions
+# are met:
+# 1. Redistributions of source code must retain the above copyright
+#    notice, this list of conditions and the following disclaimer.
+# 2. Redistributions in binary form must reproduce the above copyright
+#    notice, this list of conditions and the following disclaimer in the
+#    documentation and/or other materials provided with the distribution.
+#
+# THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR
+# IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
+# OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
+# IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT,
+# INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
+# NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
+# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
+# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF
+# THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+grep=${GREP:-grep}
+zcat=${ZCAT:-zstdcat}
+
+endofopts=0
+pattern_found=0
+grep_args=""
+hyphen=0
+silent=0
+
+prog=${0##*/}
+
+# handle being called 'zegrep' or 'zfgrep'
+case $prog in
+    *egrep*) prog=zegrep; grep_args='-E';;
+    *fgrep*) prog=zfgrep; grep_args='-F';;
+    *)       prog=zstdgrep;;
+esac
+
+# skip all options and pass them on to grep taking care of options
+# with arguments, and if -e was supplied
+
+while [ "$#" -gt 0 ] && [ "${endofopts}" -eq 0 ]; do
+    case "$1" in
+    # from GNU grep-2.5.1 -- keep in sync!
+        -[ABCDXdefm])
+            if [ "$#" -lt 2 ]; then
+                printf '%s: missing argument for %s flag\n' "${prog}" "$1" >&2
+                exit 1
+            fi
+            case "$1" in
+                -e)
+                    pattern="$2"
+                    pattern_found=1
+                    shift 2
+                    break
+                    ;;
+                -f)
+                    pattern_found=2
+                    ;;
+                *)
+                    ;;
+            esac
+            grep_args="${grep_args} $1 $2"
+            shift 2
+            ;;
+        --)
+            shift
+            endofopts=1
+            ;;
+        -)
+            hyphen=1
+            shift
+            ;;
+        -h)
+            silent=1
+            shift
+            ;;
+        -*)
+            grep_args="${grep_args} $1"
+            shift
+            ;;
+        *)
+            # pattern to grep for
+            endofopts=1
+            ;;
+    esac
+done
+
+# if no -e option was found, take next argument as grep-pattern
+if [ "${pattern_found}" -lt 1 ]; then
+    if [ "$#" -ge 1 ]; then
+        pattern="$1"
+        shift
+    elif [ "${hyphen}" -gt 0 ]; then
+        pattern="-"
+    else
+        printf '%s: missing pattern\n' "${prog}" >&2
+        exit 1
+    fi
+fi
+
+EXIT_CODE=0
+# call grep ...
+if [ "$#" -lt 1 ]; then
+    # ... on stdin
+    set -f # Disable file name generation (globbing).
+    # shellcheck disable=SC2086
+    "${zcat}" - | "${grep}" ${grep_args} -- "${pattern}" -
+    EXIT_CODE=$?
+    set +f
+else
+    # ... on all files given on the command line
+    if [ "${silent}" -lt 1 ] && [ "$#" -gt 1 ]; then
+        grep_args="-H ${grep_args}"
+    fi
+    set -f
+    while [ "$#" -gt 0 ]; do
+        # shellcheck disable=SC2086
+        if [ $pattern_found -eq 2 ]; then
+            "${zcat}" -- "$1" | "${grep}" --label="${1}" ${grep_args} -- -
+        else
+            "${zcat}" -- "$1" | "${grep}" --label="${1}" ${grep_args} -- "${pattern}" -
+        fi
+        [ "$?" -ne 0 ] && EXIT_CODE=1
+        shift
+    done
+    set +f
+fi
+
+exit "${EXIT_CODE}"

miniconda3/bin/zstdless

@@ -0,0 +1,8 @@
+#!/bin/sh
+
+zstd=${ZSTD:-zstd}
+
+# TODO: Address quirks and bugs tied to old versions of less, provide a mechanism to pass flags directly to zstd
+
+export LESSOPEN="|-${zstd} -cdfq %s"
+exec less "$@"

miniconda3/compiler_compat/README

@@ -0,0 +1,2 @@
+Files in this folder are to enhance backwards compatibility of anaconda software with older compilers.
+See: https://github.com/conda/conda/issues/6030 for more information.

miniconda3/conda-meta/_libgcc_mutex-0.1-main.json

@@ -0,0 +1,31 @@
+{
+  "name": "_libgcc_mutex",
+  "version": "0.1",
+  "build": "main",
+  "build_number": 0,
+  "channel": "https://repo.anaconda.com/pkgs/main/linux-64",
+  "subdir": "linux-64",
+  "fn": "_libgcc_mutex-0.1-main.conda",
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