# Copyright (C) 2012 Anaconda, Inc # SPDX-License-Identifier: BSD-3-Clause """Environment object describing the conda environment.yaml file.""" from __future__ import annotations import os import re from itertools import chain from typing import TYPE_CHECKING from ..base.context import context from ..cli import common from ..common.io import dashlist from ..common.iterators import unique from ..common.path import expand from ..common.serialize import json, yaml from ..core.prefix_data import PrefixData from ..deprecations import deprecated from ..exceptions import ( CondaMultiError, EnvironmentFileEmpty, EnvironmentFileInvalid, EnvironmentFileNotFound, InvalidMatchSpec, ) from ..gateways.connection.download import download_text from ..gateways.connection.session import CONDA_SESSION_SCHEMES from ..history import History from ..models.environment import Environment as EnvironmentModel from ..models.environment import EnvironmentConfig from ..models.match_spec import MatchSpec if TYPE_CHECKING: from typing import Any REQUIRED_KEYS = frozenset(("dependencies",)) OPTIONAL_KEYS = frozenset( ( "name", "prefix", "channels", "variables", ) ) VALID_KEYS = frozenset((*REQUIRED_KEYS, *OPTIONAL_KEYS)) def field_type_validation(field_name: str, value: Any, value_type: Any) -> None: """Validates the type of a value""" if not isinstance(value, value_type): raise EnvironmentFileInvalid( f"Invalid type for '{field_name}', expected a {value_type.__name__}" ) def prefix_validation(prefix: str): """Validate the contents of the prefix field. Will ensure: * prefix is a string """ field_type_validation("prefix", prefix, str) def name_validation(name: str): """Validate the contents of the name field. Will ensure: * name is a string """ field_type_validation("name", name, str) def dependencies_validation(dependencies: list): """Validate the contents of the dependencies field. Will ensure: * dependencies are a list * all string dependencies are MatchSpec compatible * the only other type allowed is a dict """ field_type_validation("dependencies", dependencies, list) errors = [] for dependency in dependencies: if isinstance(dependency, str): # If the dependency is a string type, it must be # MatchSpec compatible. try: MatchSpec(dependency) except InvalidMatchSpec as err: errors.append(EnvironmentFileInvalid(str(err))) elif isinstance(dependency, dict): # dict types are also allowed. There are no requirements # for the form of this entry pass else: # All other types are invalid errors.append( EnvironmentFileInvalid( f"'{dependency}' is an invalid type for a 'dependency'" ) ) if errors: raise CondaMultiError(errors) def channels_validation(channels: list): """Validate the contents of the channels field. Will ensure: * channels is a list * all entries are strings """ field_type_validation("channels", channels, list) for channel in channels: if not isinstance(channel, str): raise EnvironmentFileInvalid( "`channels` key must only contain strings. Found '{channel}'" ) def variables_validation(variables: dict[str, str]): """Validate the contents of the variables field. Will ensure: * variables is a dict * all entries are strings """ field_type_validation("variables", variables, dict) SCHEMA_VALIDATORS = { "name": name_validation, "prefix": prefix_validation, "dependencies": dependencies_validation, "channels": channels_validation, "variables": variables_validation, } def get_schema_errors(data: dict) -> list[EnvironmentFileInvalid]: """Parses environment.yaml data to build a list of schema errors Will produce errors to ensure: * all required fields are present * all fields contain valid data :param dict data: The contents of the environment.yaml :returns errors: A list of EnvironmentFileInvalid exceptions that occurred during validation """ errors = [] # Ensure all required keys are present for field in REQUIRED_KEYS.difference(data): errors.append(EnvironmentFileInvalid(f"Missing required field '{field}'")) # Run validations on all the relevant fields, extra keys are ignored for key, validator in SCHEMA_VALIDATORS.items(): try: validator(data[key]) except KeyError: pass except EnvironmentFileInvalid as err: errors.append(err) return errors def validate_keys(data, kwargs): """Check for unknown keys, remove them and print a warning""" invalid_keys = [] new_data = data.copy() if data else {} for key in data.keys(): if key not in VALID_KEYS: invalid_keys.append(key) new_data.pop(key) if invalid_keys: filename = kwargs.get("filename") verb = "are" if len(invalid_keys) != 1 else "is" plural = "s" if len(invalid_keys) != 1 else "" print( f"\nEnvironmentSectionNotValid: The following section{plural} on " f"'{filename}' {verb} invalid and will be ignored:" ) for key in invalid_keys: print(f" - {key}") print() deps = data.get("dependencies") or [] depsplit = re.compile(r"[<>~\s=]") is_pip = lambda dep: "pip" in depsplit.split(dep)[0].split("::") lists_pip = any(is_pip(dep) for dep in deps if not isinstance(dep, dict)) for dep in deps: if isinstance(dep, dict) and "pip" in dep and not lists_pip: print( "Warning: you have pip-installed dependencies in your environment file, " "but you do not list pip itself as one of your conda dependencies. Conda " "may not use the correct pip to install your packages, and they may end up " "in the wrong place. Please add an explicit pip dependency. I'm adding one" " for you, but still nagging you." ) new_data["dependencies"].insert(0, "pip") break return new_data def from_environment( name, prefix, no_builds=False, ignore_channels=False, from_history=False ): """ Get ``EnvironmentYaml`` object from prefix Args: name: The name of environment prefix: The path of prefix no_builds: Whether has build requirement ignore_channels: whether ignore_channels from_history: Whether environment file should be based on explicit specs in history Returns: EnvironmentYaml object """ pd = PrefixData(prefix, interoperability=True) variables = pd.get_environment_env_vars() if from_history: history = History(prefix).get_requested_specs_map() deps = [str(package) for package in history.values()] return EnvironmentYaml( name=name, dependencies=deps, channels=list(context.channels), prefix=prefix, variables=variables, ) conda_precs = pd.get_conda_packages() python_precs = pd.get_python_packages() dependencies = [ conda_prec.spec_no_build if no_builds else conda_prec.spec for conda_prec in conda_precs ] if python_precs: dependencies.append( { "pip": [ f"{python_prec.name}=={python_prec.version}" for python_prec in python_precs ] } ) channels = list(context.channels) if not ignore_channels: for conda_prec in conda_precs: canonical_name = conda_prec.channel.canonical_name if canonical_name not in channels: channels.insert(0, canonical_name) return EnvironmentYaml( name=name, dependencies=dependencies, channels=channels, prefix=prefix, variables=variables, ) def from_yaml(yamlstr: str, **kwargs) -> EnvironmentYaml: """Load and return a ``EnvironmentYaml`` from a given ``yaml`` string :param yamlstr: The contents of the environment.yaml :param raise_validation_errors: Indicates if an error should be raised if the yamlstr is found to be invalid :returns EnvironmentYaml: A representation of the environment file """ data = yaml.loads(yamlstr) filename = kwargs.get("filename") if data is None: raise EnvironmentFileEmpty(filename) # Perform schema validation. This will output a warning for any invalid schema. errors = get_schema_errors(data) if errors: # Warn for all the schema errors in the environment deprecated.topic( "26.3", "26.9", topic="The environment file is not fully CEP 24 compliant", addendum=( "In the future, this configuration will be rejected. Please fix the following " "errors in order to make the configuration valid: " f"{dashlist(errors)}" ), deprecation_type=FutureWarning, ) data = validate_keys(data, kwargs) if kwargs is not None: for key, value in kwargs.items(): data[key] = value _expand_channels(data) return EnvironmentYaml(**data) def _expand_channels(data): """Expands ``EnvironmentYaml`` variables for the channels found in the ``yaml`` data""" data["channels"] = [ os.path.expandvars(channel) for channel in data.get("channels", []) ] def load_file(filename): """Load and return an yaml string from a given file""" url_scheme = filename.split("://", 1)[0] if url_scheme in CONDA_SESSION_SCHEMES: yamlstr = download_text(filename) elif not os.path.exists(filename): raise EnvironmentFileNotFound(filename) else: with open(filename, "rb") as fp: yamlb = fp.read() try: yamlstr = yamlb.decode("utf-8") except UnicodeDecodeError: yamlstr = yamlb.decode("utf-16") return yamlstr def from_file(filename): """Load and return an ``EnvironmentYaml`` from a given file""" yamlstr = load_file(filename) return from_yaml(yamlstr, filename=filename) class Dependencies(dict): """A ``dict`` subclass that parses the raw dependencies into a conda and pip list""" def __init__(self, raw, *args, **kwargs): super().__init__(*args, **kwargs) self.raw = raw self.parse() def parse(self): """Parse the raw dependencies into a conda and pip list""" if not self.raw: return self.update({"conda": []}) for line in self.raw: if isinstance(line, dict): self.update(line) else: self["conda"].append(str(MatchSpec(line))) if "pip" in self: if not self["pip"]: del self["pip"] if not any(MatchSpec(s).name == "pip" for s in self["conda"]): self["conda"].append("pip") # TODO only append when it's not already present def add(self, package_name): """Add a package to the ``EnvironmentYaml``""" self.raw.append(package_name) self.parse() class EnvironmentYaml: """A class representing an ``environment.yaml`` file""" def __init__( self, name=None, filename=None, channels=None, dependencies=None, prefix=None, variables=None, ): self.name = name self.filename = filename self.prefix = prefix self.dependencies = Dependencies(dependencies) self.variables = variables if channels is None: channels = [] self.channels = channels def add_channels(self, channels): """Add channels to the ``EnvironmentYaml``""" self.channels = list(unique(chain.from_iterable((channels, self.channels)))) def remove_channels(self): """Remove all channels from the ``EnvironmentYaml``""" self.channels = [] def to_dict(self, stream=None): """Convert information related to the ``EnvironmentYaml`` into a dictionary""" d = {"name": self.name} if self.channels: d["channels"] = self.channels if self.dependencies: d["dependencies"] = self.dependencies.raw if self.variables: d["variables"] = self.variables if self.prefix: d["prefix"] = self.prefix if stream is None: return d stream.write(json.dumps(d)) def to_yaml(self, stream=None): """Convert information related to the ``EnvironmentYaml`` into a ``yaml`` string""" d = self.to_dict() return yaml.write(d, fp=stream) def save(self): """Save the ``EnvironmentYaml`` data to a ``yaml`` file""" with open(self.filename, "wb") as fp: self.to_yaml(stream=fp) def to_environment_model(self) -> EnvironmentModel: """Convert the ``Environment`` into a ``model.Environment`` object""" config = EnvironmentConfig(channels=tuple(self.channels)) external_packages = {} if pip_dependencies := self.dependencies.get("pip"): external_packages["pip"] = pip_dependencies requested_packages = [ MatchSpec(spec) for spec in self.dependencies.get("conda", []) ] return EnvironmentModel( prefix=self.prefix or context.target_prefix, platform=context.subdir, name=self.name, config=config, variables=self.variables, external_packages=external_packages, requested_packages=requested_packages, ) @deprecated("26.3", "26.9", addendum="Use `conda.env.env.EnvironmentYaml` instead.") class Environment(EnvironmentYaml): """A class representing an ``environment.yaml`` file""" @deprecated("25.9", "26.3") def get_filename(filename): """Expand filename if local path or return the ``url``""" url_scheme = filename.split("://", 1)[0] if url_scheme in CONDA_SESSION_SCHEMES: return filename else: return expand(filename) def print_result(args, prefix, result): """Print the result of an install operation""" if context.json: if result["conda"] is None and result["pip"] is None: common.stdout_json_success( message="All requested packages already installed." ) else: if result["conda"] is not None: actions = result["conda"] else: actions = {} if result["pip"] is not None: actions["PIP"] = result["pip"] common.stdout_json_success(prefix=prefix, actions=actions) else: common.print_activate(args.name or prefix)