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README.md
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---
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license: other
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pretty_name: ConnectomeBench2
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tags:
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- connectomics
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- proofreading
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- electron-microscopy
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- mesh
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size_categories:
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configs:
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- config_name: default
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data_files:
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# ConnectomeBench2
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ConnectomeBench2 is a unified benchmark for **automated proofreading of connectomic neural-segmentation data**. Each row is one candidate proofreading sample (a real human merge edit, a real human split edit, or a synthetic control) with the associated mesh geometry and electron-microscopy (EM) renderings.
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Downstream trainers should treat this dataset as the single source of truth for sample identity, labels, train/validation/test split, and which task(s) a row is valid for.
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### Other
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- **`metadata: str`** — JSON-stringified original metadata struct. Parse with `json.loads`. Useful keys: `operation_id`, `source_operation_id`, `strategy`, `image_types`, `interface_point_nm`, `before_root_ids`, `after_root_ids`, …
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## Counts
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- 401,170 rows total · ~80/11/9 train/
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- 251,499 rows with EM views; all 401,170 have geometry
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- **~2.2M model-level samples** (EM × 4 views + geom × 3 views), or **~2.8M** counting dual + single geom separately
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## Layout
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---
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license: other
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pretty_name: ConnectomeBench2
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tags:
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- connectomics
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- proofreading
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- electron-microscopy
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- mesh
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size_categories:
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- 100K<n<1M
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configs:
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- config_name: default
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data_files:
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# ConnectomeBench2
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ConnectomeBench2 is a unified benchmark for **automated proofreading of connectomic neural-segmentation data**. **401,170 samples** across 4 species (mouse, fly, human, zebrafish) and 5 sample types (real merge edits, real split edits, synthetic adjacent / junction / synapse controls), with the associated mesh geometry and electron-microscopy (EM) renderings.
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Downstream trainers should treat this dataset as the single source of truth for sample identity, labels, train/validation/test split, and which task(s) a row is valid for.
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### Other
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- **`metadata: str`** — JSON-stringified original metadata struct. Parse with `json.loads`. Useful keys: `operation_id`, `source_operation_id`, `strategy`, `image_types`, `interface_point_nm`, `before_root_ids`, `after_root_ids`, …
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## Counts
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- **401,170 rows** total · ~80/11/9 train (319,727) / validation (43,517) / test (37,926)
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- 251,499 rows with EM views; all 401,170 have geometry
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- **~2.2M model-level samples** (EM × 4 views + geom × 3 views), or **~2.8M** counting dual + single geom separately
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- 506 parquet shards (~240 MB each)
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## Layout
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