Commit History

  1. Delete old duckdb index files

    Verified signature
    e3c4f62

  1. Update duckdb index files

    2581b32
  2. Update duckdb index files

    f3e1e53
  3. Update duckdb index files

    1218aaf

  1. Update duckdb index files

    116a932
  2. Update parquet files

    f3749c4

  1. Update duckdb index files

    1bb69b7
  2. Update duckdb index files

    061fcf4
  3. Update duckdb index files

    7494e2b
  4. Update parquet files

    d4fb1f4

  1. Update duckdb index files

    f04ee81
  2. Update duckdb index files

    e726338
  3. Update duckdb index files

    288e96b

  1. Update parquet files

    939ed2b

  1. Update duckdb index files

    a217ba2

  1. Update duckdb index files

    7b22b85

  1. Update parquet files

    609b064

  1. Update duckdb index files

    38c68bc

  1. Update parquet files

    459148f

  1. Update parquet files

    488b4b7

  1. Update parquet files

    388259c

  1. parse contact matrices from PDBbind and store in chunks

    11e49b7

  1. remove hack

    8ffbe2c
  2. fix version number

    1c3a7be
  3. eliminate index

    94c9517
  4. convert dtype to float32⁠

    5a93178

  1. update notebooks

    75e835a
  2. update datasets⁠

    36e04be

  1. fix typo

    8f150cc
  2. add covalent inhibitors split

    7aad16b

  1. add dataset with maximum sequence length 512

    fd1b48a

  1. really remove all KRAS proteins

    7fffd73

  1. fix skip download feature

    5680ee8
  2. enable offline mode

    88fe72c
  3. fix dataset loading script

    db83314

  1. add to README

    a18b94f
  2. update README

    a6bc330
  3. update to most recent DBs, add split without KRAS

    558c2c3

  1. add IC50 values back

    d7c19d0

  1. update dataset to only inclulde Ki/Kd (but not IC50/EC50)

    fad2eb6

  1. make smiles canonical

    9737168

  1. update deepcoy DUDE predictions⁠

    91dc8a9

  1. update predictions for D-COID and deepcoy/DEKOIS⁠

    c066e7c

  1. update .gitattributes

    3b0188e
  2. add deepcoy DEKOIS and DUDE predictions

    fe94b5c

  1. add RF2 scoring for testing

    0a05de5

  1. add D-COID data set

    d802ce7
  2. update predictions

    acf20bc

  1. add DUDE predictions

    87404f2
  2. split DUD-E into smaller partitions

    7e5a878