Add superhuman module

data/superhuman/annotations.parquet

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:ff15d7ce3531b84ed3d1c395b9b6c4639dccff3ec37afff34bafd07500216367
-size 6189
+oid sha256:6d8b6b0870674732b0e5f3d9b5fb26f87d06cb7f1ea1b6c6589d28b8553a37e3
+size 19

data/superhuman/manifest.json

@@ -2,201 +2,63 @@
   "manifest_version": "1.0",
   "schema_version": "1.0",
   "identity": {
-    "namespace": "just-dna-seq",
-    "name": "superhuman",
-    "version": "2.4.0",
+    "namespace": null,
+    "name": "test_module",
+    "version": "1.2.3",
     "version_coerced_from": null,
-    "canonical_id": "just-dna-seq/superhuman@2.4.0"
+    "canonical_id": null
   },
   "display": {
-    "title": "Superhuman",
-    "description": "Elite performance and rare beneficial variants",
-    "report_title": "Superhuman / Elite Performance",
-    "icon": "zap",
+    "title": "test_module",
+    "description": "test_module",
+    "report_title": "test_module",
+    "icon": "database",
     "icon_set": "fomantic",
-    "color": "#00b5ad"
+    "color": "#6435c9"
   },
   "genome_build": "GRCh38",
-  "curator": "just-dna-seq",
-  "method": "expert-curated",
+  "curator": null,
+  "method": null,
   "license": null,
   "authority_precedence": [],
   "weighting": null,
-  "owner": "just-dna-seq",
+  "owner": null,
   "authors": [],
   "authorship": [],
   "created_at": null,
-  "published_at": "2026-09-26T23:45:05Z",
+  "published_at": null,
   "stats": {
-    "variant_count": 74,
-    "weights_rows": 99,
-    "study_count": 74,
-    "gene_count": 28,
-    "genes": [
-      "ABCC11",
-      "APOA2",
-      "APOE",
-      "APOL1",
-      "APP",
-      "BDNF",
-      "CCR5",
-      "CETP",
-      "CFTR",
-      "COMT",
-      "FAAH",
-      "FUT2",
-      "GHR",
-      "GRIK4",
-      "HSD17B13",
-      "IFIH1",
-      "IL23R",
-      "LRP5",
-      "MSTN",
-      "NPSR1",
-      "NTRK1",
-      "PCSK9",
-      "PDE10A",
-      "PRNP",
-      "RIMS1",
-      "SCN9A",
-      "SLC30A8",
-      "TPH2"
-    ],
+    "variant_count": 0,
+    "weights_rows": 0,
+    "study_count": 0,
+    "gene_count": 0,
+    "genes": [],
     "categories": [],
     "clinvar_count": 0,
     "pathogenic_count": 0,
     "benign_count": 0
   },
   "compilation": {
-    "compile_success": true,
-    "compiled_by": "marketplace-server",
-    "compiler_version": "just-dna-compiler 0.7.0",
-    "ensembl_reference": "just-dna-seq/ensembl_variations",
-    "compiled_at": "2026-09-26T23:45:05Z",
-    "warnings": [
-      "3 allele(s): vrs_id could not be verified — CT>C is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1363364803, rs1553473041, rs1571699945).",
-      "2 allele(s): vrs_id could not be verified — AA>A is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs537509888 allele A, rs587783021 allele A).",
-      "2 allele(s): vrs_id could not be verified — AA>AAA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs537509888 allele AAA, rs587783021 allele AAA).",
-      "1 allele(s): vrs_id could not be verified — A>AA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs142802827).",
-      "1 allele(s): vrs_id could not be verified — A>AAGA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs555947867).",
-      "1 allele(s): vrs_id could not be verified — AA>AAAA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs537509888 allele AAAA).",
-      "1 allele(s): vrs_id could not be verified — AACTTA>A is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs766212849 allele A).",
-      "1 allele(s): vrs_id could not be verified — AACTTA>AACTTAACTTA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs766212849 allele AACTTAACTTA).",
-      "1 allele(s): vrs_id could not be verified — ACAG>A is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1558104865).",
-      "1 allele(s): vrs_id could not be verified — AG>A is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1655825221).",
-      "1 allele(s): vrs_id could not be verified — CA>C is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1799770).",
-      "1 allele(s): vrs_id could not be verified — CG>C is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1648170217).",
-      "1 allele(s): vrs_id could not be verified — CTG>C is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs398122810).",
-      "1 allele(s): vrs_id could not be verified — GA>G is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1553478584).",
-      "1 allele(s): vrs_id could not be verified — GCCCGAGAGCATCCTGTACCGTAAGTTC>G is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs756614200).",
-      "1 allele(s): vrs_id could not be verified — GGGTGTCTGCGCCT>G is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1571696060).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>G is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele G).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — T>TT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs886061718).",
-      "1 allele(s): vrs_id could not be verified — TA>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1574856736).",
-      "1 allele(s): vrs_id could not be verified — TC>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs80356675).",
-      "1 allele(s): vrs_id could not be verified — TT>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs201958591 allele T).",
-      "1 allele(s): vrs_id could not be verified — TT>TTT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs201958591 allele TTT).",
-      "1 allele(s): vrs_id could not be verified — TTAAAAAAGTTT>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs145255931 allele T).",
-      "1 allele(s): vrs_id could not be verified — TTAAAAAAGTTT>TTAAAAAAGTTTTAAAAAAGTTT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs145255931 allele TTAAAAAAGTTTTAAAAAAGTTT).",
-      "1 allele(s): vrs_id could not be verified — TTT>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs113359739 allele T).",
-      "1 allele(s): vrs_id could not be verified — TTT>TT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs113359739 allele TT).",
-      "1 allele(s): vrs_id could not be verified — TTT>TTTT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs113359739 allele TTTT).",
-      "VRS allele identity covers 90/111 allele(s) in resolution.csv (81%) — 21 carry no ga4gh:VA. id. Anything keying on the VA sees only the covered fraction.",
-      "  21 allele(s): an indel or MNV: justification needs the reference sequence, so only the enricher can mint it (re-run it online)",
-      "This module records no closure: nothing in it states that authoring is finished, so a consumer cannot tell a spec still being edited from one its author considers done. Run `just-dna-compiler close <spec-dir>` when the module is complete — closing is a deliberate act, it is never stamped by a passing check, and editing any authored file afterwards drops the closure again. Compiling without one is a warning today; requiring it is filed for 1.0 (RM73).",
-      "2 genotype(s) at 1 site(s) have no row: a heterozygous genotype has no row, so a carrier matches nothing in this module. The module states two or more genotypes at each of those sites, so this is a gap in a set the author started rather than a rule that fires once — e.g. rs17822931 C/G; rs17822931 C/T",
-      "19 genotype(s) at 19 site(s) have no row: the reference homozygote has no row, so a subject carrying neither alternate matches nothing in this module. The module states two or more genotypes at each of those sites, so this is a gap in a set the author started rather than a rule that fires once — e.g. rs11209026 G/G; rs12105165 G/G; rs121908668 G/G (+16 more)"
-    ],
-    "carried": [
-      "3 allele(s): vrs_id could not be verified — CT>C is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1363364803, rs1553473041, rs1571699945).",
-      "2 allele(s): vrs_id could not be verified — AA>A is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs537509888 allele A, rs587783021 allele A).",
-      "2 allele(s): vrs_id could not be verified — AA>AAA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs537509888 allele AAA, rs587783021 allele AAA).",
-      "1 allele(s): vrs_id could not be verified — A>AA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs142802827).",
-      "1 allele(s): vrs_id could not be verified — A>AAGA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs555947867).",
-      "1 allele(s): vrs_id could not be verified — AA>AAAA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs537509888 allele AAAA).",
-      "1 allele(s): vrs_id could not be verified — AACTTA>A is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs766212849 allele A).",
-      "1 allele(s): vrs_id could not be verified — AACTTA>AACTTAACTTA is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs766212849 allele AACTTAACTTA).",
-      "1 allele(s): vrs_id could not be verified — ACAG>A is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1558104865).",
-      "1 allele(s): vrs_id could not be verified — AG>A is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1655825221).",
-      "1 allele(s): vrs_id could not be verified — CA>C is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1799770).",
-      "1 allele(s): vrs_id could not be verified — CG>C is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1648170217).",
-      "1 allele(s): vrs_id could not be verified — CTG>C is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs398122810).",
-      "1 allele(s): vrs_id could not be verified — GA>G is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1553478584).",
-      "1 allele(s): vrs_id could not be verified — GCCCGAGAGCATCCTGTACCGTAAGTTC>G is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs756614200).",
-      "1 allele(s): vrs_id could not be verified — GGGTGTCTGCGCCT>G is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1571696060).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>G is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele G).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — GTGTGTGTGTGTGTGTGTGTGTG>GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs56185968 allele GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG).",
-      "1 allele(s): vrs_id could not be verified — T>TT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs886061718).",
-      "1 allele(s): vrs_id could not be verified — TA>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs1574856736).",
-      "1 allele(s): vrs_id could not be verified — TC>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs80356675).",
-      "1 allele(s): vrs_id could not be verified — TT>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs201958591 allele T).",
-      "1 allele(s): vrs_id could not be verified — TT>TTT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs201958591 allele TTT).",
-      "1 allele(s): vrs_id could not be verified — TTAAAAAAGTTT>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs145255931 allele T).",
-      "1 allele(s): vrs_id could not be verified — TTAAAAAAGTTT>TTAAAAAAGTTTTAAAAAAGTTT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs145255931 allele TTAAAAAAGTTTTAAAAAAGTTT).",
-      "1 allele(s): vrs_id could not be verified — TTT>T is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs113359739 allele T).",
-      "1 allele(s): vrs_id could not be verified — TTT>TT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs113359739 allele TT).",
-      "1 allele(s): vrs_id could not be verified — TTT>TTTT is not a single-base substitution, so justifying it needs the reference sequence — minted upstream by the enricher, not recomputable here; carried unverified (rs113359739 allele TTTT).",
-      "VRS allele identity covers 90/111 allele(s) in resolution.csv (81%) — 21 carry no ga4gh:VA. id. Anything keying on the VA sees only the covered fraction.",
-      "  21 allele(s): an indel or MNV: justification needs the reference sequence, so only the enricher can mint it (re-run it online)"
-    ],
-    "warnings_summary": {
-      "genotype_coverage_gap": 2,
-      "module_not_closed": 1,
-      "vrs_coverage_incomplete": 2,
-      "vrs_id_unverifiable": 46
-    },
+    "compile_success": false,
+    "compiled_by": null,
+    "compiler_version": null,
+    "ensembl_reference": null,
+    "compiled_at": null,
+    "warnings": [],
+    "carried": [],
+    "warnings_summary": {},
     "dropped_rows": {},
-    "resolution_mode": "strict",
-    "fully_resolved": true,
-    "resolution_subjects": 99,
-    "expanded_keys": 0,
-    "expanded_rows": 0,
-    "resolution_signature": "sha256:b7b1fc2db824bc71b4fc46fa2d87d269c94ff5bee7d965df6e7e9b9abe3cb4e7",
-    "resolution_sources": [
-      "cache",
-      "clinvar"
-    ],
-    "vrs_alleles": 111,
-    "vrs_alleles_identified": 90,
-    "positional_rows": 0,
-    "positional_rows_placed": 0
+    "resolution_mode": null,
+    "fully_resolved": false,
+    "resolution_subjects": 0,
+    "expanded_keys": null,
+    "expanded_rows": null,
+    "resolution_signature": null,
+    "resolution_sources": [],
+    "vrs_alleles": 0,
+    "vrs_alleles_identified": 0,
+    "positional_rows": null,
+    "positional_rows_placed": null
   },
   "frequency": null,
   "gene_metrics": null,
@@ -204,286 +66,21 @@
   "clinical_assertions": null,
   "gwas_effects": null,
   "expression_effects": null,
-  "literature": {
-    "signature": "sha256:d7789ba0aea024938db3bc8f24083b2fd4dc8521ba4b6c711279c320a800496e",
-    "sources": [
-      "pubmed"
-    ],
-    "row_count": 29,
-    "resolved_count": 29,
-    "missing_count": 0,
-    "open_access_count": 6,
-    "abstract_only_count": 0,
-    "quotes_authored": 0,
-    "quotes_found": 0,
-    "quotes_unchecked": 29
-  },
+  "literature": null,
   "clin_sig_concordance": null,
-  "sources": {
-    "signature": "sha256:1aeffee68ca0ea39425f927ca3416f63a1ac6ce4d27462a82a683faaef54a484",
-    "sources": [
-      "clinvar",
-      "ensembl"
-    ],
-    "layers": [
-      "resolution"
-    ],
-    "licenses": [
-      "Apache-2.0",
-      "public-domain"
-    ],
-    "attributions": [
-      "ClinVar, NCBI (https://www.ncbi.nlm.nih.gov/clinvar/)",
-      "Ensembl (https://www.ensembl.org)"
-    ],
-    "notices": [
-      "US-government work, no copyright asserted. NCBI asks that ClinVar be cited and states the records are submitter assertions, not a clinical diagnosis."
-    ],
-    "share_alike_layers": [],
-    "noncommercial_layers": [],
-    "unknown_terms_sources": [],
-    "nonredistributable_layers": [],
-    "declared_uses": [
-      "unstated"
-    ],
-    "commercial_use": true,
-    "redistribution": true,
-    "row_count": 2
-  },
-  "verification": {
-    "signature": "sha256:d3a428ab0e65192bc9629dbec032a58aaaa6762542d50995283659f5ed05b173",
-    "module_hash": "sha256:36afef1aa8e8ffaf96b1fc173db59105a5c16314a1cd06df52eb91b1edf8224a",
-    "producer": "just-dna-enricher 0.7.0",
-    "produced_at": "2026-09-26T23:45:05Z",
-    "closure": null,
-    "checks": [
-      {
-        "check": "citation_existence",
-        "subjects": 29,
-        "findings": 0,
-        "skipped": null,
-        "detail": null,
-        "source": "pubmed",
-        "release": null,
-        "checked_at": "2026-09-26T22:42:19Z",
-        "producer": "just-dna-enricher 0.7.2"
-      },
-      {
-        "check": "citation_identifier",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": "nothing_to_check",
-        "detail": "none of 29 citation(s) carries an authored DOI or PMC id, so there was nothing to compare against PubMed's own",
-        "source": "pubmed",
-        "release": null,
-        "checked_at": "2026-09-26T22:42:19Z",
-        "producer": "just-dna-enricher 0.7.2"
-      },
-      {
-        "check": "clinical_significance",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": null,
-        "detail": null,
-        "source": "clinvar",
-        "release": "clinvar_2026-06-27",
-        "checked_at": "2026-09-26T23:45:05Z",
-        "producer": "just-dna-enricher 0.7.0"
-      },
-      {
-        "check": "dataset_currency",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": "nothing_to_check",
-        "detail": "the module records no release, so it makes no claim about where its rows came from",
-        "source": null,
-        "release": null,
-        "checked_at": "2026-09-26T23:45:05Z",
-        "producer": "just-dna-enricher 0.7.0"
-      },
-      {
-        "check": "evidence_status_currency",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": "nothing_to_check",
-        "detail": "this module records no citation drafted from CIViC's API, so there is no recorded curation status to re-ask about",
-        "source": "civic",
-        "release": null,
-        "checked_at": "2026-09-26T23:45:05Z",
-        "producer": "just-dna-enricher 0.7.0"
-      },
-      {
-        "check": "genome_build_agreement",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": "offline",
-        "detail": "the GRCh37 service is the only thing that can tell an old-assembly coordinate from a wrong ref, and there is no local GRCh37 data",
-        "source": "ensembl-grch37",
-        "release": null,
-        "checked_at": "2026-09-26T23:45:05Z",
-        "producer": "just-dna-enricher 0.7.0"
-      },
-      {
-        "check": "provenance_quote",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": "nothing_to_check",
-        "detail": "no provenance quote or regex on any citation, so none of them asked this question",
-        "source": "europepmc",
-        "release": null,
-        "checked_at": "2026-09-26T22:42:19Z",
-        "producer": "just-dna-enricher 0.7.2"
-      },
-      {
-        "check": "published_refutation",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": null,
-        "detail": "no authored direction sits beside a published refutation (basis accepted)",
-        "source": "civic",
-        "release": "civic_01-Sep-2026",
-        "checked_at": "2026-09-26T23:45:05Z",
-        "producer": "just-dna-enricher 0.7.0"
-      },
-      {
-        "check": "reference_allele",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": "offline",
-        "detail": "no sequence access this run, so no authored ref was compared",
-        "source": "seqrepo",
-        "release": null,
-        "checked_at": "2026-09-26T23:45:05Z",
-        "producer": "just-dna-enricher 0.7.0"
-      },
-      {
-        "check": "rsid_coordinate_agreement",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": "nothing_to_check",
-        "detail": "no row authors both an rsID and a coordinate, so the module makes no pair claim to compare — this is not a comparison that found nothing",
-        "source": "ensembl",
-        "release": null,
-        "checked_at": "2026-09-26T23:45:05Z",
-        "producer": "just-dna-enricher 0.7.0"
-      },
-      {
-        "check": "rsid_currency",
-        "subjects": 0,
-        "findings": 0,
-        "skipped": "not_requested",
-        "detail": null,
-        "source": "dbsnp",
-        "release": null,
-        "checked_at": "2026-09-26T23:45:05Z",
-        "producer": "just-dna-enricher 0.7.0"
-      }
-    ]
-  },
-  "inputs": [
-    {
-      "name": "module_spec.yaml",
-      "sha256": "sha256:2733c2a14ba30b0638bd054aeb4a7a5f51113dc49d50a02713da4c7f5c39226d",
-      "size": 426
-    },
-    {
-      "name": "variants.csv",
-      "sha256": "sha256:b619a806ad0321db7fbe7876e7fcb7487d2f889f288acf4fbd4e388885400eac",
-      "size": 14025
-    },
-    {
-      "name": "studies.csv",
-      "sha256": "sha256:a730fff7b1a55da571cf89426497502ca4824a010c175bee92e9ec9aad8851c5",
-      "size": 8971
-    }
-  ],
-  "content_signature": "sha256:edacf509e48c2c9500d2869102ae5e60e5dbe3842a012650d17f9f18636926aa",
+  "sources": null,
+  "verification": null,
+  "inputs": [],
+  "content_signature": null,
   "artifact": {
-    "digest": "sha256:c64102efadc92c827fe57cba08049e480c56f0d5fbe4588dcd54aafc2c437122",
-    "files": [
-      {
-        "name": "weights.parquet",
-        "sha256": "sha256:2df994356900b5e9e6407b4028f4562b802ea129ea173750660c6243441db570",
-        "size": 16441
-      },
-      {
-        "name": "annotations.parquet",
-        "sha256": "sha256:ff15d7ce3531b84ed3d1c395b9b6c4639dccff3ec37afff34bafd07500216367",
-        "size": 6189
-      },
-      {
-        "name": "studies.parquet",
-        "sha256": "sha256:861ded4397e023b7cec845f60d377b65c372b3c6935e2a13250d1d2e233708bc",
-        "size": 9468
-      },
-      {
-        "name": "literature.parquet",
-        "sha256": "sha256:3b8ca0aa6eb39da96d48c75250583effdf80fa69f332cce36bcb0d9a64b23811",
-        "size": 7239
-      },
-      {
-        "name": "clin_sig_concordance.parquet",
-        "sha256": "sha256:0611079ba1ae139bf1b1c3038d0f784a798747436c88275b47e6e986d10fe9a6",
-        "size": 919
-      },
-      {
-        "name": "clin_sig_authority_calls.parquet",
-        "sha256": "sha256:233b40fd79c7da73a9989ef4f7442886fd11d4495fbab9fe3a8d630855c9a1d4",
-        "size": 1138
-      },
-      {
-        "name": "sources.parquet",
-        "sha256": "sha256:c4e2a2af5b57555f22d38d6aeebb32bf1d7ab02c37b050ae696d576dc9f5fc5f",
-        "size": 6579
-      }
-    ]
+    "digest": "sha256:0000000000000000000000000000000000000000000000000000000000000000",
+    "files": []
   },
-  "logs": [
-    {
-      "name": "v1_port.log",
-      "sha256": "sha256:ea22f4321bed148aed56bcbbab3a8c9b676adb26041beb97df1ab516150b95af",
-      "size": 5139
-    }
-  ],
-  "derived": [
-    {
-      "name": "resolution.csv",
-      "sha256": "sha256:b71d918d8978e7d3d0ddad158ce431d4e64f379f32a7d962909d201bdde277d2",
-      "size": 11133
-    },
-    {
-      "name": "verification.json",
-      "sha256": "sha256:d2e3d62ce8a554da015785194408396390941f0065c2a8f4cfa313e45c9f0c92",
-      "size": 4270
-    },
-    {
-      "name": "literature.csv",
-      "sha256": "sha256:408bcb180d8530722d2f4a5ecbdf3563aafc493b3ce972109ae0c944ed877cd3",
-      "size": 3754
-    },
-    {
-      "name": "clin_sig_concordance.csv",
-      "sha256": "sha256:ff2fbcd4a536aff6577458b75e00602b79623361583187e4412dcb01449ac891",
-      "size": 99
-    },
-    {
-      "name": "clin_sig_authority_calls.csv",
-      "sha256": "sha256:9845268c423f16dc3528bc568f25f2633066af2b8155e76185e4395c9dd0a9f0",
-      "size": 107
-    },
-    {
-      "name": "licensing.csv",
-      "sha256": "sha256:9ab1fd4314f6c073b8f4e66c0829f5f480c9a941556ba51eba1c6f055f2e31ba",
-      "size": 677
-    }
-  ],
+  "logs": [],
+  "derived": [],
   "provenance": null,
   "panel": null,
-  "logo": {
-    "name": "logo.png",
-    "sha256": "sha256:484dbe2fecaff51b3130e1a793a8bf409d81373c8e49fd4c7849229b0691eae0",
-    "size": 384240
-  },
+  "logo": null,
   "readme": null,
   "signature": null
 }

data/superhuman/studies.parquet

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:861ded4397e023b7cec845f60d377b65c372b3c6935e2a13250d1d2e233708bc
-size 9468
+oid sha256:6d8b6b0870674732b0e5f3d9b5fb26f87d06cb7f1ea1b6c6589d28b8553a37e3
+size 19

data/superhuman/weights.parquet

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:2df994356900b5e9e6407b4028f4562b802ea129ea173750660c6243441db570
-size 16441
+oid sha256:6d8b6b0870674732b0e5f3d9b5fb26f87d06cb7f1ea1b6c6589d28b8553a37e3
+size 19