Add lipidmetabolism module (ported from Generation-I dna-seq/just_lipidmetabolism)

data/lipidmetabolism/annotations.parquet

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data/lipidmetabolism/clin_sig_authority_calls.parquet

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data/lipidmetabolism/clin_sig_concordance.parquet

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data/lipidmetabolism/manifest.json

@@ -2,10 +2,11 @@
   "manifest_version": "1.0",
   "schema_version": "1.0",
   "identity": {
-    "namespace": null,
+    "namespace": "just-dna-seq",
     "name": "lipidmetabolism",
-    "version": null,
-    "canonical_id": null
+    "version": "1.1.0",
+    "version_coerced_from": null,
+    "canonical_id": "just-dna-seq/lipidmetabolism@1.1.0"
   },
   "display": {
     "title": "Lipid Metabolism",
@@ -19,15 +20,17 @@
   "curator": "just-dna-seq",
   "method": "expert-curated",
   "license": null,
-  "owner": null,
+  "authority_precedence": [],
+  "weighting": null,
+  "owner": "just-dna-seq",
   "authors": [],
   "authorship": [],
   "created_at": null,
-  "published_at": null,
+  "published_at": "2026-09-26T23:44:28Z",
   "stats": {
     "variant_count": 15,
     "weights_rows": 45,
-    "study_count": 41,
+    "study_count": 44,
     "gene_count": 12,
     "genes": [
       "ABCG8",
@@ -50,38 +53,53 @@
   },
   "compilation": {
     "compile_success": true,
-    "compiled_by": null,
-    "compiler_version": "just-dna-compiler 0.5.1",
-    "ensembl_reference": null,
-    "compiled_at": "2026-08-09T17:53:12Z",
+    "compiled_by": "marketplace-server",
+    "compiler_version": "just-dna-compiler 0.7.0",
+    "ensembl_reference": "just-dna-seq/ensembl_variations",
+    "compiled_at": "2026-09-26T23:44:28Z",
     "warnings": [
-      "literature.csv describes 1 citation(s) no study in this module cites: ['20686565']",
-      "sources.csv has no row for 1 source(s) the module's fact tables cite: ['pubmed'] — their terms are unrecorded."
+      "This module records no closure: nothing in it states that authoring is finished, so a consumer cannot tell a spec still being edited from one its author considers done. Run `just-dna-compiler close <spec-dir>` when the module is complete — closing is a deliberate act, it is never stamped by a passing check, and editing any authored file afterwards drops the closure again. Compiling without one is a warning today; requiring it is filed for 1.0 (RM73)."
     ],
-    "resolution_mode": "best_effort",
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+    "warnings_summary": {
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+    "resolution_mode": "strict",
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+    "resolution_subjects": 45,
+    "expanded_keys": 0,
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     "vrs_alleles": 24,
-    "vrs_alleles_identified": 24
+    "vrs_alleles_identified": 24,
+    "positional_rows": 0,
+    "positional_rows_placed": 0
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   "frequency": null,
   "gene_metrics": null,
+  "gene_validity": null,
+  "clinical_assertions": null,
+  "gwas_effects": null,
+  "expression_effects": null,
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     "open_access_count": 19,
     "abstract_only_count": 0,
     "quotes_authored": 0,
-    "quotes_found": 0
+    "quotes_found": 0,
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@@ -108,59 +126,231 @@
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+    "module_hash": "sha256:ebee2be955f078d131c91c4b93e6f3257fcd91ecb541ac1d753f2a306a4c1cb1",
+    "producer": "just-dna-enricher 0.7.0",
+    "produced_at": "2026-09-26T23:44:25Z",
+    "closure": null,
+    "checks": [
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+        "check": "citation_existence",
+        "subjects": 37,
+        "findings": 0,
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+        "source": "pubmed",
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+        "checked_at": "2026-09-26T17:35:11Z",
+        "producer": "just-dna-enricher 0.7.2"
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+        "subjects": 0,
+        "findings": 0,
+        "skipped": "nothing_to_check",
+        "detail": "none of 37 citation(s) carries an authored DOI or PMC id, so there was nothing to compare against PubMed's own",
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+        "checked_at": "2026-09-26T17:35:11Z",
+        "producer": "just-dna-enricher 0.7.2"
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+        "subjects": 0,
+        "findings": 0,
+        "skipped": null,
+        "detail": null,
+        "source": "clinvar",
+        "release": "clinvar_2026-06-27",
+        "checked_at": "2026-09-26T23:44:25Z",
+        "producer": "just-dna-enricher 0.7.0"
+      },
+      {
+        "check": "dataset_currency",
+        "subjects": 0,
+        "findings": 0,
+        "skipped": "nothing_to_check",
+        "detail": "the module records no release, so it makes no claim about where its rows came from",
+        "source": null,
+        "release": null,
+        "checked_at": "2026-09-26T23:44:25Z",
+        "producer": "just-dna-enricher 0.7.0"
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+      {
+        "check": "evidence_status_currency",
+        "subjects": 0,
+        "findings": 0,
+        "skipped": "nothing_to_check",
+        "detail": "this module records no citation drafted from CIViC's API, so there is no recorded curation status to re-ask about",
+        "source": "civic",
+        "release": null,
+        "checked_at": "2026-09-26T23:44:25Z",
+        "producer": "just-dna-enricher 0.7.0"
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+      {
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+        "subjects": 0,
+        "findings": 0,
+        "skipped": "offline",
+        "detail": "the GRCh37 service is the only thing that can tell an old-assembly coordinate from a wrong ref, and there is no local GRCh37 data",
+        "source": "ensembl-grch37",
+        "release": null,
+        "checked_at": "2026-09-26T23:44:25Z",
+        "producer": "just-dna-enricher 0.7.0"
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+        "subjects": 0,
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+        "source": "europepmc",
+        "release": null,
+        "checked_at": "2026-09-26T17:35:11Z",
+        "producer": "just-dna-enricher 0.7.2"
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+        "source": "civic",
+        "release": "civic_01-Sep-2026",
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+        "findings": 0,
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+        "source": "seqrepo",
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+        "producer": "just-dna-enricher 0.7.0"
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