Add coronary module (ported from Generation-I dna-seq/just_coronary)
Browse files
data/coronary/annotations.parquet
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@@ -1,3 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:
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-
size
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version https://git-lfs.github.com/spec/v1
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oid sha256:71fb33682b4ef67b13169a883abf7e1eec45a0ce01384143d67249c76518c05b
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size 2077
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data/coronary/manifest.json
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@@ -0,0 +1,108 @@
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{
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"manifest_version": "1.0",
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"schema_version": "1.0",
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"identity": {
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"namespace": null,
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"name": "coronary",
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"version": null,
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"canonical_id": null
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},
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"display": {
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"title": "Coronary",
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"description": "Coronary artery disease risk associations",
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"report_title": "Coronary Artery Disease",
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"icon": "heart",
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"color": "#db2828"
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},
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"genome_build": "GRCh38",
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"curator": "just-dna-seq",
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"method": "expert-curated",
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"license": null,
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"owner": null,
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"authors": [],
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"created_at": null,
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"published_at": null,
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"stats": {
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"variant_count": 27,
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"weights_rows": 81,
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"study_count": 118,
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"gene_count": 22,
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"genes": [
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"APC",
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"APOB",
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"CDH13",
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"CDKN2B-AS1",
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"CNNM2",
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"CXCL12 (LINC02881)",
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"FMN2",
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"FURIN",
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"GUCYA3",
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"LDLR",
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"LINC02881",
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"LPA",
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"MIA3",
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"MTHFD1L",
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"PCSK9",
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"PKN2-AS1",
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"SEZ6L",
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"SH2B3",
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"SMAD3",
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"SORT1",
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"WDR12",
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"ZPR1"
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],
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"categories": []
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},
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"compilation": {
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"compile_success": true,
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"compiled_by": null,
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"compiler_version": "just-dna-compiler 0.1.0",
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"ensembl_reference": null,
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"compiled_at": "2026-07-06T20:56:12Z",
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"warnings": []
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},
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"inputs": [
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{
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"name": "module_spec.yaml",
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"sha256": "sha256:65f3ce2300751cc3d88670aa7e9548d8a3af494911906f36036a8c6c18c7d936",
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"size": 292
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},
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{
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"name": "variants.csv",
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"sha256": "sha256:5e2e86c9dedca4b8ff51562e33c1b1c082553244610b99b199caf848fc1015e9",
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| 73 |
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"size": 29293
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},
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{
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"name": "studies.csv",
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"sha256": "sha256:5155b33f99f5ede7c03b42e56ffbfd78ffb21cae513930e3c1614222e12c61c4",
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| 78 |
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"size": 51972
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| 79 |
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}
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],
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| 81 |
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"artifact": {
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"digest": "sha256:eed9ed5ff4a6bd684aab8c9a87865f87c683445bb38864f7586420d34a60c697",
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"files": [
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{
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| 85 |
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"name": "weights.parquet",
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| 86 |
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"sha256": "sha256:d13b64fae856b03fc209dbc23266635449328bba940188cd136b7650928996f3",
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| 87 |
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"size": 12816
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},
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{
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"name": "annotations.parquet",
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"sha256": "sha256:71fb33682b4ef67b13169a883abf7e1eec45a0ce01384143d67249c76518c05b",
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"size": 2077
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},
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| 94 |
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{
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| 95 |
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"name": "studies.parquet",
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"sha256": "sha256:7c8214c28e595c866230996a6d056b1af30fa6b22598fb87b92286b872a0f660",
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"size": 5971
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| 98 |
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}
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]
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},
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"logs": [
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| 102 |
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{
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| 103 |
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"name": "v1_port.log",
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"sha256": "sha256:a85161a41983b12941a4dcee2ed9275cb08c31a6c842c7051e8e2ac9f8d751c6",
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"size": 235
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}
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]
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}
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data/coronary/studies.parquet
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:7c8214c28e595c866230996a6d056b1af30fa6b22598fb87b92286b872a0f660
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| 3 |
+
size 5971
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data/coronary/weights.parquet
CHANGED
|
@@ -1,3 +1,3 @@
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|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:d13b64fae856b03fc209dbc23266635449328bba940188cd136b7650928996f3
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| 3 |
+
size 12816
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