Add cancer module (ported from Generation-I dna-seq/just_cancer)

data/cancer/annotations.parquet

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+size 475813

data/cancer/manifest.json

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+{
+  "manifest_version": "1.0",
+  "schema_version": "1.0",
+  "identity": {
+    "namespace": null,
+    "name": "cancer",
+    "version": null,
+    "canonical_id": null
+  },
+  "display": {
+    "title": "Cancer",
+    "description": "Annotation module: cancer",
+    "report_title": "Cancer",
+    "icon": "database",
+    "color": "#6435c9"
+  },
+  "genome_build": "GRCh38",
+  "curator": "just-dna-seq",
+  "method": "expert-curated",
+  "license": null,
+  "owner": null,
+  "authors": [],
+  "created_at": null,
+  "published_at": null,
+  "stats": {
+    "variant_count": 67116,
+    "weights_rows": 145467,
+    "study_count": 67116,
+    "gene_count": 319,
+    "genes": [
+      "ABL1",
+      "ACVR1B",
+      "AIP",
+      "AKT2",
+      "AKT3",
+      "ALK",
+      "AMER1",
+      "ANKRD26",
+      "AP5Z1",
+      "APC",
+      "AR",
+      "ARID1A",
+      "ARID2",
+      "ASXL1",
+      "ATM",
+      "ATR",
+      "ATRX",
+      "AURKA",
+      "AURKB",
+      "AXIN1",
+      "AXIN2",
+      "AXL",
+      "BAP1",
+      "BARD1",
+      "BCORL1",
+      "BLM",
+      "BMPR1A",
+      "BRAF",
+      "BRCA1",
+      "BRCA2",
+      "BRD4",
+      "BRIP1",
+      "BTK",
+      "BUB1B",
+      "CARD11",
+      "CBFB",
+      "CBL",
+      "CCN6",
+      "CCND2",
+      "CD70",
+      "CD79A",
+      "CDC73",
+      "CDH1",
+      "CDK12",
+      "CDK4",
+      "CDK6",
+      "CDK8",
+      "CDKN1A",
+      "CDKN1B",
+      "CDKN1C",
+      "CDKN2A",
+      "CDKN2C",
+      "CEBPA",
+      "CEP57",
+      "CHD2",
+      "CHD4",
+      "CHEK1",
+      "CHEK2",
+      "CSF1R",
+      "CTCF",
+      "CTNNA1",
+      "CTNNB1",
+      "CUL3",
+      "CYLD",
+      "DCLRE1C",
+      "DDB1",
+      "DDB2",
+      "DDR2",
+      "DDX41",
+      "DICER1",
+      "DIS3L2",
+      "DKC1",
+      "DMC1",
+      "DNMT3A",
+      "DOT1L",
+      "EGFR",
+      "ELANE",
+      "EME2",
+      "EP300",
+      "EPCAM",
+      "ERBB2",
+      "ERBB3",
+      "ERBB4",
+      "ERCC1",
+      "ERCC2",
+      "ERCC3",
+      "ERCC4",
+      "ERCC5",
+      "ERCC6",
+      "ERCC8",
+      "ERG",
+      "ESR1",
+      "ETV4",
+      "ETV6",
+      "EXT1",
+      "EZH2",
+      "FANCA",
+      "FANCB",
+      "FANCC",
+      "FANCD2",
+      "FANCE",
+      "FANCF",
+      "FANCG",
+      "FANCI",
+      "FANCL",
+      "FANCM",
+      "FAS",
+      "FAT1",
+      "FBXW7",
+      "FGF10",
+      "FGF14",
+      "FGF23",
+      "FGF3",
+      "FGF4",
+      "FGFR1",
+      "FGFR2",
+      "FGFR3",
+      "FH",
+      "FLCN",
+      "FLT3",
+      "FLT4",
+      "GATA1",
+      "GATA2",
+      "GATA3",
+      "GATA4",
+      "GATA6",
+      "GLI1",
+      "GNA11",
+      "GNAQ",
+      "GNAS",
+      "GPC3",
+      "GRIN2A",
+      "GSK3B",
+      "GTF2H5",
+      "H3-3A",
+      "HGF",
+      "HNF1A",
+      "HOXB13",
+      "HRAS",
+      "IDH1",
+      "IDH2",
+      "IGF1R",
+      "IGF2",
+      "IKZF1",
+      "IL7R",
+      "IRF4",
+      "JAK1",
+      "JAK2",
+      "JAK3",
+      "JUN",
+      "KAT6A",
+      "KDM6A",
+      "KDR",
+      "KEL",
+      "KIT",
+      "KITLG",
+      "KMT2A",
+      "KMT2C",
+      "KMT2D",
+      "KRAS",
+      "LIG4",
+      "LYN",
+      "LZTR1",
+      "MAGI2",
+      "MAP2K1",
+      "MAP2K2",
+      "MAP3K1",
+      "MAX",
+      "MBD4",
+      "MDM2",
+      "MED12",
+      "MEN1",
+      "MET",
+      "MITF",
+      "MLH1",
+      "MLH3",
+      "MRE11",
+      "MSH2",
+      "MSH3",
+      "MSH4",
+      "MSH5",
+      "MSH6",
+      "MTOR",
+      "MUS81",
+      "MUTYH",
+      "MYC",
+      "MYCN",
+      "MYD88",
+      "NBN",
+      "NEIL1",
+      "NF1",
+      "NF2",
+      "NFE2L2",
+      "NFKBIA",
+      "NHEJ1",
+      "NKX2-1",
+      "NOTCH1",
+      "NOTCH2",
+      "NOTCH3",
+      "NPM1",
+      "NRAS",
+      "NSD1",
+      "NSUN2",
+      "NTHL1",
+      "NTRK1",
+      "NTRK2",
+      "NUP93",
+      "PAK3",
+      "PALB2",
+      "PAX5",
+      "PBRM1",
+      "PDGFRA",
+      "PDGFRB",
+      "PHOX2B",
+      "PIK3CA",
+      "PIK3CB",
+      "PIK3CG",
+      "PIK3R1",
+      "PIK3R2",
+      "PKD1",
+      "PLCG2",
+      "PMS1",
+      "PMS2",
+      "PNKP",
+      "POLD1",
+      "POLE",
+      "POLH",
+      "POT1",
+      "PPM1D",
+      "PPP2R1A",
+      "PREX2",
+      "PRF1",
+      "PRKAR1A",
+      "PRKDC",
+      "PRKN",
+      "PTCH1",
+      "PTEN",
+      "PTPN11",
+      "RAC1",
+      "RAD50",
+      "RAD51",
+      "RAD51B",
+      "RAD51C",
+      "RAD51D",
+      "RAD54B",
+      "RAD54L",
+      "RAF1",
+      "RANBP2",
+      "RASA2",
+      "RBBP8",
+      "RHBDF2",
+      "RICTOR",
+      "RIT1",
+      "RNF43",
+      "ROS1",
+      "RPA1",
+      "RRAS",
+      "RUNX1",
+      "RUNX1T1",
+      "SAMD9L",
+      "SBDS",
+      "SDHA",
+      "SDHAF2",
+      "SDHB",
+      "SDHC",
+      "SDHD",
+      "SETD2",
+      "SHOC2",
+      "SLIT2",
+      "SLX4",
+      "SMAD2",
+      "SMAD3",
+      "SMAD4",
+      "SMARCA4",
+      "SMARCB1",
+      "SMO",
+      "SOCS1",
+      "SOS1",
+      "SOS2",
+      "SOX10",
+      "SOX2",
+      "SOX9",
+      "SPEN",
+      "SPOP",
+      "SPRED1",
+      "SPTA1",
+      "SRC",
+      "STAG2",
+      "STAT3",
+      "STAT4",
+      "STK11",
+      "SUFU",
+      "SYK",
+      "TAF1",
+      "TBX3",
+      "TERC",
+      "TERT",
+      "TET2",
+      "TGFBR2",
+      "TINF2",
+      "TMEM127",
+      "TNFAIP3",
+      "TOP1",
+      "TP53",
+      "TSC1",
+      "TSC2",
+      "TSHR",
+      "U2AF1",
+      "UNG",
+      "VEGFA",
+      "VHL",
+      "WRN",
+      "WT1",
+      "XPA",
+      "XPC",
+      "XPO1",
+      "XRCC1",
+      "XRCC2",
+      "XRCC4"
+    ],
+    "categories": []
+  },
+  "compilation": {
+    "compile_success": true,
+    "compiled_by": null,
+    "compiler_version": "just-dna-compiler 0.1.0",
+    "ensembl_reference": null,
+    "compiled_at": "2026-07-06T23:06:47Z",
+    "warnings": []
+  },
+  "inputs": [
+    {
+      "name": "module_spec.yaml",
+      "sha256": "sha256:4fe181cfb96ffd0474dedc392b186a5e729825ee1e05b0776ac36ab8af9d1ff1",
+      "size": 260
+    },
+    {
+      "name": "variants.csv",
+      "sha256": "sha256:bb4f12b7c9b49b7b4739b7cc140f57bd2fc4db44c82b0250f9cf29f2bada4719",
+      "size": 31664305
+    },
+    {
+      "name": "studies.csv",
+      "sha256": "sha256:88f711087286e0b2c2d381e210a57646743de47bd98016253be4e50bbf1f20c6",
+      "size": 8385411
+    }
+  ],
+  "artifact": {
+    "digest": "sha256:83493a588a27870f1c13a1016fe5956570ba0ded2a94da14a7217385bf0232ea",
+    "files": [
+      {
+        "name": "weights.parquet",
+        "sha256": "sha256:81b602420dadf247aee2ea7b29bc1403811e603ed9fb1e783f46e9cd156b73aa",
+        "size": 2222473
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+      {
+        "name": "annotations.parquet",
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+        "size": 475813
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+        "size": 474229
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+  },
+  "logs": [
+    {
+      "name": "v1_port.log",
+      "sha256": "sha256:ecc87181481b02fc620e8f4ff3cd68e4d74fba93277492bfe572ef21501234e0",
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+  ]
+}

data/cancer/studies.parquet

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data/cancer/weights.parquet

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