| 2026-01-21 23:31:44,141 - INFO - Scanning Stage 2 output: v4/test_both | |
| 2026-01-21 23:31:44,243 - INFO - Found 402 structures with NPZ + JSON | |
| 2026-01-21 23:31:44,243 - INFO - Antibody mode enabled: using AntibodyMidTrainTaskGenerator | |
| 2026-01-21 23:31:44,243 - INFO - RESIDUE_RETRIEVAL_V1 enabled with CIF dir: v4/test_both/prepared_cif | |
| 2026-01-21 23:31:44,243 - INFO - Using 32 parallel workers | |
| 2026-01-21 23:31:52,038 - INFO - Progress: 100/402 @ 12.8/s | |
| 2026-01-21 23:31:56,218 - INFO - Progress: 200/402 @ 16.7/s | |
| 2026-01-21 23:32:01,192 - INFO - Progress: 300/402 @ 17.7/s | |
| 2026-01-21 23:32:11,606 - INFO - Progress: 400/402 @ 14.6/s | |
| 2026-01-21 23:32:14,499 - INFO - Processing complete: 402/402 in 30.3s | |
| 2026-01-21 23:32:14,499 - INFO - Writing 33096 samples to v4/test_both/samples/midtrain_samples_20260121_233214.jsonl | |
| 2026-01-21 23:32:14,732 - INFO - ============================================================ | |
| 2026-01-21 23:32:14,732 - INFO - Sample Generation Summary | |
| 2026-01-21 23:32:14,732 - INFO - ============================================================ | |
| 2026-01-21 23:32:14,732 - INFO - Structures processed: 402/402 | |
| 2026-01-21 23:32:14,732 - INFO - Total samples: 33096 | |
| 2026-01-21 23:32:14,732 - INFO - Time: 30.3s (13.3 structures/s) | |
| 2026-01-21 23:32:14,732 - INFO - Workers: 32 | |
| 2026-01-21 23:32:14,732 - INFO - | |
| 2026-01-21 23:32:14,732 - INFO - Samples by task: | |
| 2026-01-21 23:32:14,733 - INFO - CHAINPAIR_GRAPH_V1: 400 | |
| 2026-01-21 23:32:14,733 - INFO - DSSP_SEQ_V1: 5780 | |
| 2026-01-21 23:32:14,733 - INFO - LDDT_BIN_V1: 402 | |
| 2026-01-21 23:32:14,733 - INFO - PAIR_BATCH_V1: 402 | |
| 2026-01-21 23:32:14,733 - INFO - PAIR_CONTACT_YN_V1: 7756 | |
| 2026-01-21 23:32:14,733 - INFO - PAIR_DIST_BIN_V1: 11776 | |
| 2026-01-21 23:32:14,733 - INFO - RSA_SEQ_V1: 5780 | |
| 2026-01-21 23:32:14,733 - INFO - SALTBRIDGE_BIN_V1: 400 | |
| 2026-01-21 23:32:14,733 - INFO - TOP_CHAINPAIR_V1: 400 | |
| 2026-01-21 23:32:14,733 - INFO - | |
| 2026-01-21 23:32:14,733 - INFO - Output file: v4/test_both/samples/midtrain_samples_20260121_233214.jsonl | |
| 2026-01-21 23:32:14,733 - INFO - Stats file: v4/test_both/samples/stats_20260121_233214.json | |