Hugging Face's logo

Datasets:
jzshared
/
dnalongbench

Dataset card Files
xet
 Community
1
andyjzhao commited on
Commit
1d30955
·
verified ·
1 Parent(s): d29cd5b

Add files using upload-large-folder tool

Browse files
Files changed (49) hide show
  1. .gitattributes +41 -0
  2. regulatory_sequence_activity_prediction/human/seqs/hg38.ml.fa +3 -0
  3. regulatory_sequence_activity_prediction/human/seqs/hg38.ml.fa.fai +23 -0
  4. regulatory_sequence_activity_prediction/human/seqs/hg38.ml.fa.gz +3 -0
  5. regulatory_sequence_activity_prediction/human/sequences.bed +0 -0
  6. regulatory_sequence_activity_prediction/human/statistics_legacy.json +10 -0
  7. regulatory_sequence_activity_prediction/human/targets/test-0-7.tfr +3 -0
  8. regulatory_sequence_activity_prediction/human/targets/train-0-0.tfr +3 -0
  9. regulatory_sequence_activity_prediction/human/targets/train-0-10.tfr +3 -0
  10. regulatory_sequence_activity_prediction/human/targets/train-0-100.tfr +3 -0
  11. regulatory_sequence_activity_prediction/human/targets/train-0-101.tfr +3 -0
  12. regulatory_sequence_activity_prediction/human/targets/train-0-102.tfr +3 -0
  13. regulatory_sequence_activity_prediction/human/targets/train-0-103.tfr +3 -0
  14. regulatory_sequence_activity_prediction/human/targets/train-0-104.tfr +3 -0
  15. regulatory_sequence_activity_prediction/human/targets/train-0-105.tfr +3 -0
  16. regulatory_sequence_activity_prediction/human/targets/train-0-106.tfr +3 -0
  17. regulatory_sequence_activity_prediction/human/targets/train-0-107.tfr +3 -0
  18. regulatory_sequence_activity_prediction/human/targets/train-0-108.tfr +3 -0
  19. regulatory_sequence_activity_prediction/human/targets/train-0-109.tfr +3 -0
  20. regulatory_sequence_activity_prediction/human/targets/train-0-11.tfr +3 -0
  21. regulatory_sequence_activity_prediction/human/targets/train-0-110.tfr +3 -0
  22. regulatory_sequence_activity_prediction/human/targets/train-0-111.tfr +3 -0
  23. regulatory_sequence_activity_prediction/human/targets/train-0-112.tfr +3 -0
  24. regulatory_sequence_activity_prediction/human/targets/train-0-113.tfr +3 -0
  25. regulatory_sequence_activity_prediction/human/targets/train-0-114.tfr +3 -0
  26. regulatory_sequence_activity_prediction/human/targets/train-0-115.tfr +3 -0
  27. regulatory_sequence_activity_prediction/human/targets/train-0-116.tfr +3 -0
  28. regulatory_sequence_activity_prediction/human/targets/train-0-117.tfr +3 -0
  29. regulatory_sequence_activity_prediction/human/targets/train-0-118.tfr +3 -0
  30. regulatory_sequence_activity_prediction/human/targets/train-0-119.tfr +3 -0
  31. regulatory_sequence_activity_prediction/human/targets/train-0-120.tfr +3 -0
  32. regulatory_sequence_activity_prediction/human/targets/train-0-121.tfr +3 -0
  33. regulatory_sequence_activity_prediction/human/targets/train-0-122.tfr +3 -0
  34. regulatory_sequence_activity_prediction/human/targets/train-0-123.tfr +3 -0
  35. regulatory_sequence_activity_prediction/human/targets/train-0-124.tfr +3 -0
  36. regulatory_sequence_activity_prediction/human/targets/train-0-125.tfr +3 -0
  37. regulatory_sequence_activity_prediction/human/targets/train-0-126.tfr +3 -0
  38. regulatory_sequence_activity_prediction/human/targets/train-0-127.tfr +3 -0
  39. regulatory_sequence_activity_prediction/human/targets/train-0-128.tfr +3 -0
  40. regulatory_sequence_activity_prediction/mouse/seqs/mm10.ml.fa.fai +20 -0
  41. regulatory_sequence_activity_prediction/mouse/sequences.bed +0 -0
  42. regulatory_sequence_activity_prediction/mouse/statistics_legacy.json +10 -0
  43. regulatory_sequence_activity_prediction/mouse/targets/valid-1-1.tfr +3 -0
  44. regulatory_sequence_activity_prediction/mouse/targets/valid-1-2.tfr +3 -0
  45. regulatory_sequence_activity_prediction/mouse/targets/valid-1-3.tfr +3 -0
  46. regulatory_sequence_activity_prediction/mouse/targets/valid-1-4.tfr +3 -0
  47. regulatory_sequence_activity_prediction/mouse/targets/valid-1-5.tfr +3 -0
  48. regulatory_sequence_activity_prediction/mouse/targets/valid-1-6.tfr +3 -0
  49. regulatory_sequence_activity_prediction/mouse/targets/valid-1-8.tfr +3 -0
.gitattributes CHANGED
@@ -72,3 +72,44 @@ transcription_initiation_signal_prediction/targets/agg.minus.allprocap.bedgraph.
72
  transcription_initiation_signal_prediction/targets/agg.plus.allprocap.bedgraph.sorted.merged.bw filter=lfs diff=lfs merge=lfs -text
73
  transcription_initiation_signal_prediction/targets/agg.plus.bw.bedgraph.bw filter=lfs diff=lfs merge=lfs -text
74
  transcription_initiation_signal_prediction/seqs/Homo_sapiens.GRCh38.dna.primary_assembly.fa filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
72
  transcription_initiation_signal_prediction/targets/agg.plus.allprocap.bedgraph.sorted.merged.bw filter=lfs diff=lfs merge=lfs -text
73
  transcription_initiation_signal_prediction/targets/agg.plus.bw.bedgraph.bw filter=lfs diff=lfs merge=lfs -text
74
  transcription_initiation_signal_prediction/seqs/Homo_sapiens.GRCh38.dna.primary_assembly.fa filter=lfs diff=lfs merge=lfs -text
75
+ regulatory_sequence_activity_prediction/mouse/targets/valid-1-8.tfr filter=lfs diff=lfs merge=lfs -text
76
+ regulatory_sequence_activity_prediction/mouse/targets/valid-1-3.tfr filter=lfs diff=lfs merge=lfs -text
77
+ regulatory_sequence_activity_prediction/mouse/targets/valid-1-1.tfr filter=lfs diff=lfs merge=lfs -text
78
+ regulatory_sequence_activity_prediction/mouse/targets/valid-1-4.tfr filter=lfs diff=lfs merge=lfs -text
79
+ regulatory_sequence_activity_prediction/mouse/targets/valid-1-2.tfr filter=lfs diff=lfs merge=lfs -text
80
+ regulatory_sequence_activity_prediction/mouse/targets/valid-1-6.tfr filter=lfs diff=lfs merge=lfs -text
81
+ regulatory_sequence_activity_prediction/mouse/targets/valid-1-5.tfr filter=lfs diff=lfs merge=lfs -text
82
+ regulatory_sequence_activity_prediction/human/targets/test-0-7.tfr filter=lfs diff=lfs merge=lfs -text
83
+ regulatory_sequence_activity_prediction/human/targets/train-0-103.tfr filter=lfs diff=lfs merge=lfs -text
84
+ regulatory_sequence_activity_prediction/human/targets/train-0-0.tfr filter=lfs diff=lfs merge=lfs -text
85
+ regulatory_sequence_activity_prediction/human/targets/train-0-100.tfr filter=lfs diff=lfs merge=lfs -text
86
+ regulatory_sequence_activity_prediction/human/targets/train-0-102.tfr filter=lfs diff=lfs merge=lfs -text
87
+ regulatory_sequence_activity_prediction/human/targets/train-0-101.tfr filter=lfs diff=lfs merge=lfs -text
88
+ regulatory_sequence_activity_prediction/human/targets/train-0-104.tfr filter=lfs diff=lfs merge=lfs -text
89
+ regulatory_sequence_activity_prediction/human/seqs/hg38.ml.fa filter=lfs diff=lfs merge=lfs -text
90
+ regulatory_sequence_activity_prediction/human/targets/train-0-105.tfr filter=lfs diff=lfs merge=lfs -text
91
+ regulatory_sequence_activity_prediction/human/targets/train-0-107.tfr filter=lfs diff=lfs merge=lfs -text
92
+ regulatory_sequence_activity_prediction/human/targets/train-0-108.tfr filter=lfs diff=lfs merge=lfs -text
93
+ regulatory_sequence_activity_prediction/human/targets/train-0-109.tfr filter=lfs diff=lfs merge=lfs -text
94
+ regulatory_sequence_activity_prediction/human/targets/train-0-106.tfr filter=lfs diff=lfs merge=lfs -text
95
+ regulatory_sequence_activity_prediction/human/targets/train-0-10.tfr filter=lfs diff=lfs merge=lfs -text
96
+ regulatory_sequence_activity_prediction/human/targets/train-0-110.tfr filter=lfs diff=lfs merge=lfs -text
97
+ regulatory_sequence_activity_prediction/human/targets/train-0-112.tfr filter=lfs diff=lfs merge=lfs -text
98
+ regulatory_sequence_activity_prediction/human/targets/train-0-111.tfr filter=lfs diff=lfs merge=lfs -text
99
+ regulatory_sequence_activity_prediction/human/targets/train-0-114.tfr filter=lfs diff=lfs merge=lfs -text
100
+ regulatory_sequence_activity_prediction/human/targets/train-0-113.tfr filter=lfs diff=lfs merge=lfs -text
101
+ regulatory_sequence_activity_prediction/human/targets/train-0-116.tfr filter=lfs diff=lfs merge=lfs -text
102
+ regulatory_sequence_activity_prediction/human/targets/train-0-117.tfr filter=lfs diff=lfs merge=lfs -text
103
+ regulatory_sequence_activity_prediction/human/targets/train-0-115.tfr filter=lfs diff=lfs merge=lfs -text
104
+ regulatory_sequence_activity_prediction/human/targets/train-0-118.tfr filter=lfs diff=lfs merge=lfs -text
105
+ regulatory_sequence_activity_prediction/human/targets/train-0-11.tfr filter=lfs diff=lfs merge=lfs -text
106
+ regulatory_sequence_activity_prediction/human/targets/train-0-119.tfr filter=lfs diff=lfs merge=lfs -text
107
+ regulatory_sequence_activity_prediction/human/targets/train-0-120.tfr filter=lfs diff=lfs merge=lfs -text
108
+ regulatory_sequence_activity_prediction/human/targets/train-0-122.tfr filter=lfs diff=lfs merge=lfs -text
109
+ regulatory_sequence_activity_prediction/human/targets/train-0-121.tfr filter=lfs diff=lfs merge=lfs -text
110
+ regulatory_sequence_activity_prediction/human/targets/train-0-124.tfr filter=lfs diff=lfs merge=lfs -text
111
+ regulatory_sequence_activity_prediction/human/targets/train-0-123.tfr filter=lfs diff=lfs merge=lfs -text
112
+ regulatory_sequence_activity_prediction/human/targets/train-0-125.tfr filter=lfs diff=lfs merge=lfs -text
113
+ regulatory_sequence_activity_prediction/human/targets/train-0-126.tfr filter=lfs diff=lfs merge=lfs -text
114
+ regulatory_sequence_activity_prediction/human/targets/train-0-128.tfr filter=lfs diff=lfs merge=lfs -text
115
+ regulatory_sequence_activity_prediction/human/targets/train-0-127.tfr filter=lfs diff=lfs merge=lfs -text
regulatory_sequence_activity_prediction/human/seqs/hg38.ml.fa ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a3145abd8cad4cfdedde7e68a5c6263d4dfbdf1bfe4008beac9f002ddc6c8149
3
+ size 3091663428
regulatory_sequence_activity_prediction/human/seqs/hg38.ml.fa.fai ADDED
@@ -0,0 +1,23 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ chr1 248956422 6 50 51
2
+ chr10 133797422 253935564 50 51
3
+ chr11 135086622 390408942 50 51
4
+ chr12 133275309 528197304 50 51
5
+ chr13 114364328 664138127 50 51
6
+ chr14 107043718 780789749 50 51
7
+ chr15 101991189 889974349 50 51
8
+ chr16 90338345 994005369 50 51
9
+ chr17 83257441 1086150488 50 51
10
+ chr18 80373285 1171073085 50 51
11
+ chr19 58617616 1253053843 50 51
12
+ chr2 242193529 1312843818 50 51
13
+ chr20 64444167 1559881225 50 51
14
+ chr21 46709983 1625614283 50 51
15
+ chr22 50818468 1673258473 50 51
16
+ chr3 198295559 1725093317 50 51
17
+ chr4 190214555 1927354794 50 51
18
+ chr5 181538259 2121373647 50 51
19
+ chr6 170805979 2306542678 50 51
20
+ chr7 159345973 2480764783 50 51
21
+ chr8 145138636 2643297682 50 51
22
+ chr9 138394717 2791339097 50 51
23
+ chrX 156040895 2932501715 50 51
regulatory_sequence_activity_prediction/human/seqs/hg38.ml.fa.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bd32061fdaaa4b9ba9e53ea2c391e9f12dad2160396b524a47f575dfa78d4409
3
+ size 880569564
regulatory_sequence_activity_prediction/human/sequences.bed ADDED
The diff for this file is too large to render. See raw diff
 
regulatory_sequence_activity_prediction/human/statistics_legacy.json ADDED
@@ -0,0 +1,10 @@
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "num_targets": 5313,
3
+ "train_seqs": 34021,
4
+ "valid_seqs": 2213,
5
+ "test_seqs": 1937,
6
+ "seq_length": 131072,
7
+ "pool_width": 128,
8
+ "crop_bp": 8192,
9
+ "target_length": 896
10
+ }
regulatory_sequence_activity_prediction/human/targets/test-0-7.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8a6f2aacedda22e40ac5e68907d7b6c9f044ad02d43de00b6d02a9c279ff8dba
3
+ size 1023169513
regulatory_sequence_activity_prediction/human/targets/train-0-0.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0e030876bdadb17328be28223d00e147fbea8550652c089ac0f7c4c78576365d
3
+ size 1849981841
regulatory_sequence_activity_prediction/human/targets/train-0-10.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cb46dc76c24f4b8a7bcc427ae299e60a10594c2544f5ef388048392a68f9673f
3
+ size 1836022869
regulatory_sequence_activity_prediction/human/targets/train-0-100.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f13ce16e319737c8e5bf0023f79dfa730b29a7af27a094f1545cc13286173206
3
+ size 1838666316
regulatory_sequence_activity_prediction/human/targets/train-0-101.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7e6fe9861963a312301f5192b3cf5980e5e593c9ac89be3fb281c378d2df8ecc
3
+ size 1841436840
regulatory_sequence_activity_prediction/human/targets/train-0-102.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:45ee09c5579a5b6a06393c847f84378e953de8226a5caceb1e2c3beb68e3d7b7
3
+ size 1843289600
regulatory_sequence_activity_prediction/human/targets/train-0-103.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c01f81c55763ec9e50b9eeb03e564c5731f382de98c0db278f8a6bc5791eb764
3
+ size 1843238328
regulatory_sequence_activity_prediction/human/targets/train-0-104.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ea407ddfe0d326cbbbe1b4160af9b6e8567c54d94c8de2caf5a1284ee151806a
3
+ size 1846231447
regulatory_sequence_activity_prediction/human/targets/train-0-105.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fcc19bba96954e10d53bc6e3c1eedd913185674d3e48b967803f133d8ec9a404
3
+ size 1850647740
regulatory_sequence_activity_prediction/human/targets/train-0-106.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c3c11d74c13b141e389e652fee2f8f8b7ef977c4b298868065d0156005d7d653
3
+ size 1846313012
regulatory_sequence_activity_prediction/human/targets/train-0-107.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:56fce3392cfd3f4f5cad53b4a4a007cf8b3defd1ce166188867eb8f32b12f3ea
3
+ size 1849736368
regulatory_sequence_activity_prediction/human/targets/train-0-108.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fbe2266f4bce1ccfa251ce41077bf548a8daa1818dbd626dca1b11a87191995c
3
+ size 1849915410
regulatory_sequence_activity_prediction/human/targets/train-0-109.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d0fa6e0a799d4abeddad547fd06fd5562376234de066a8972829010c0276f992
3
+ size 1848808130
regulatory_sequence_activity_prediction/human/targets/train-0-11.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bab8be65b3c3edd21df78a971da26249775014c0449b5164757ce1d8f09eec55
3
+ size 1853300487
regulatory_sequence_activity_prediction/human/targets/train-0-110.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:03124d85b5b409931c8e40685b0dabbfc058d181dc9f3359680b0ed946f86350
3
+ size 1848528217
regulatory_sequence_activity_prediction/human/targets/train-0-111.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:24c875622c0c7ee31771bb64e196e8dfe0ba9b0f2e55d80cd34ff01f8e15ce77
3
+ size 1847980994
regulatory_sequence_activity_prediction/human/targets/train-0-112.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ef4be78a83f2a0ec28c2a05bc6072b05ebe24e93d7d06bc6745254429bc8ed34
3
+ size 1843563589
regulatory_sequence_activity_prediction/human/targets/train-0-113.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6172325e6824421df07df26a5779b19567cea8e67ce30172eeecdcacff0ea91d
3
+ size 1841858442
regulatory_sequence_activity_prediction/human/targets/train-0-114.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6598d843d3953f19222d5b3083dd99361be545c4d4497e94662743c18ab9c1bd
3
+ size 1841440225
regulatory_sequence_activity_prediction/human/targets/train-0-115.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:33fcd8cb4789a597f74895df1e573fb151687ec5ce384b921317cf7d3b7273de
3
+ size 1840772743
regulatory_sequence_activity_prediction/human/targets/train-0-116.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a3452578f34fd75cf22427988708ce6f503ab891d35a2939798464b232af9f15
3
+ size 1835863111
regulatory_sequence_activity_prediction/human/targets/train-0-117.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:82891fad288df2b696e866a284f14be612b62c388d33ccbb81876452e802166f
3
+ size 1842114957
regulatory_sequence_activity_prediction/human/targets/train-0-118.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:926b5a9556b40d0377c11c70594049acf38b02984b3a0dc21ee4a3c5fcd30f09
3
+ size 1843907921
regulatory_sequence_activity_prediction/human/targets/train-0-119.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:dc23a67fba956500ae75a992cb20487b3c3691bd44204d365c6c41b1982d2b7b
3
+ size 1847525988
regulatory_sequence_activity_prediction/human/targets/train-0-120.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:042a69ec4e6ddaf53c108606a5948d7363e73545ac4e6b5a5daf03721584cf22
3
+ size 1842928416
regulatory_sequence_activity_prediction/human/targets/train-0-121.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c489a4623b13450f131bbfde23eb211d0d65573390f906249455bfdc54658be7
3
+ size 1846642080
regulatory_sequence_activity_prediction/human/targets/train-0-122.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:79e1f43b0d411b4e150edc4b565cf216d800e162dc75658c7ea51f391a1f6644
3
+ size 1842666989
regulatory_sequence_activity_prediction/human/targets/train-0-123.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:54ed271d3d38dfcb0d4e5ca660a9a08c9ef6388baf8f31f1f7a1d2c46e6ebb04
3
+ size 1839399191
regulatory_sequence_activity_prediction/human/targets/train-0-124.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:18a169001b1fefc0ccffd6de1d6c0cf0065ce0eb215ba1cfd8d229529fa09a95
3
+ size 1847942730
regulatory_sequence_activity_prediction/human/targets/train-0-125.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9219d03403b6d14974836793846f09cf7a2c14494fe8cbc03432c138c5687846
3
+ size 1838700971
regulatory_sequence_activity_prediction/human/targets/train-0-126.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:95ccba47a3757488c9b7d566b4b4ddc4c22869a9bdebc04d813c3fa271a8740d
3
+ size 1842025190
regulatory_sequence_activity_prediction/human/targets/train-0-127.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fbf7f1691101b1b4026f7232e8a7a46c25e23c7ff94e372d3dc09e0ce6e9e9e0
3
+ size 1845045606
regulatory_sequence_activity_prediction/human/targets/train-0-128.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cd05c24318592fd44ddfb581da26497461c0538ec7032ab92d75eb795b4b5ab4
3
+ size 1839905474
regulatory_sequence_activity_prediction/mouse/seqs/mm10.ml.fa.fai ADDED
@@ -0,0 +1,20 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ chr1 195471971 6 50 51
2
+ chr10 130694993 199381424 50 51
3
+ chr11 122082543 332690324 50 51
4
+ chr12 120129022 457214525 50 51
5
+ chr13 120421639 579746135 50 51
6
+ chr14 124902244 702576214 50 51
7
+ chr15 104043685 829976510 50 51
8
+ chr16 98207768 936101076 50 51
9
+ chr17 94987271 1036273007 50 51
10
+ chr18 90702639 1133160031 50 51
11
+ chr19 61431566 1225676730 50 51
12
+ chr2 182113224 1288336934 50 51
13
+ chr3 160039680 1474092429 50 51
14
+ chr4 156508116 1637332909 50 51
15
+ chr5 151834684 1796971194 50 51
16
+ chr6 149736546 1951842578 50 51
17
+ chr7 145441459 2104573861 50 51
18
+ chr8 129401213 2252924156 50 51
19
+ chr9 124595110 2384913400 50 51
20
+ chrX 171031299 2512000419 50 51
regulatory_sequence_activity_prediction/mouse/sequences.bed ADDED
The diff for this file is too large to render. See raw diff
 
regulatory_sequence_activity_prediction/mouse/statistics_legacy.json ADDED
@@ -0,0 +1,10 @@
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "num_targets": 1643,
3
+ "train_seq": 29295,
4
+ "valid_seqs": 2209,
5
+ "test_seqs": 2017,
6
+ "seq_length": 131072,
7
+ "pool_width": 128,
8
+ "crop_bp": 8192,
9
+ "target_length": 896
10
+ }
regulatory_sequence_activity_prediction/mouse/targets/valid-1-1.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:898813131d671f80e0ceb71e5f9646ec5c147bd5830faaa2a2688a1d24ee7d11
3
+ size 497823989
regulatory_sequence_activity_prediction/mouse/targets/valid-1-2.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ba76f23e714da83da3e453479f59dbaccf50557b3f4efe72002ff157c6887ed6
3
+ size 497078072
regulatory_sequence_activity_prediction/mouse/targets/valid-1-3.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f3008065f7e2539af3f2690c6d4d0041ee7124b8880536c0fb49cb596c0e2c27
3
+ size 494948570
regulatory_sequence_activity_prediction/mouse/targets/valid-1-4.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6266527b72077772f4fd139793ca19be38c4656f613d636497e55d89f62f987b
3
+ size 491460431
regulatory_sequence_activity_prediction/mouse/targets/valid-1-5.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:10cba7f63c0eb095748276cfeba8e6b56510488db6316b9ae1dc74388f87854f
3
+ size 498174497
regulatory_sequence_activity_prediction/mouse/targets/valid-1-6.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:05be135e5b172ba19b32dbe86b464e577d022d9e2f83e4112e30f3c71dcbe367
3
+ size 490618642
regulatory_sequence_activity_prediction/mouse/targets/valid-1-8.tfr ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:63495fbc94791836863485b305489df5221fe906c38a504c6e52ac9d8414a662
3
+ size 313465289