Download benchmark/schedules/cell_current.json from king159/SubcellPert: direct link, hf CLI and curl.
- Browser
- Download file 111 kB
-
https://huggingface.co/datasets/king159/SubcellPert/resolve/main/benchmark/schedules/cell_current.json
- Command line
-
hf download hf://datasets/king159/SubcellPert/benchmark/schedules/cell_current.json
-
curl -L -o cell_current.json https://huggingface.co/datasets/king159/SubcellPert/resolve/main/benchmark/schedules/cell_current.json
111 kB
| { | |
| "fit_family_policy": "independent_source_target_families_v1", | |
| "formal_fits": 608, | |
| "jobs": [ | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "oracle_count", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "oracle_count", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "oracle_count", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "spinal-ko", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gbm-ohsv", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "breast-fus", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "gut-microbiota", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "cardiac-mi", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "kidney-iri", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "pf-astro", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "lung-drug", | |
| "fit_family": "drug", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "sickness", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "dss-colitis", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "atm-rt", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "ddx54-pd1", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "adipose", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed1", | |
| "mode": "joint", | |
| "seed": 1 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed2", | |
| "mode": "joint", | |
| "seed": 2 | |
| }, | |
| { | |
| "baseline": "count_matched_resampling", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "gaussian_affine_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "radial_quantile_transport", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt_spatial", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "spatialformer", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scgpt", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "scfoundation", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| }, | |
| { | |
| "baseline": "state_se", | |
| "dataset": "uc-vdz", | |
| "fit_family": "default", | |
| "fit_group": "seed3", | |
| "mode": "joint", | |
| "seed": 3 | |
| } | |
| ], | |
| "model_repeats_per_split": 1, | |
| "pending_protocol_decisions": {}, | |
| "split_manifest": "benchmark/splits/cell_seed_schedule_dual_min50.json", | |
| "status": "planned", | |
| "validation_manifest": "benchmark/splits/cell_validation_dual_min50.json" | |
| } | |