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3academic-medicine | academic-medicine | medrxiv_2025_01_20_25320811 | [DESC]This document is a medical research preprint posted on the medRxiv server under a Creative Commons license, titled "Harnessing Artificial Intelligence for Accurate Diagnosis and Radiomics Analysis of Combined Pulmonary Fibrosis and Emphysema: Insights from a Multicenter Cohort Study," which was released on Januar... | [MARKDOWN]medRxiv preprint doi: https://doi.org/10.1101/2025.01.20.25320811; this version posted January 20, 2025. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity.
It is made available under a C... | [DESC]This document is a medical research preprint posted on the medRxiv server under a Creative Commons license, titled "Harnessing Artificial Intelligence for Accurate Diagnosis and Radiomics Analysis of Combined Pulmonary Fibrosis and Emphysema: Insights from a Multicenter Cohort Study," which was released on Januar... | |
3academic-medicine | academic-medicine | medrxiv_2025_02_13_25322239 | [DESC]This medRxiv preprint constitutes a modelling study investigating MMR vaccination coverage in the United States across the timeline of the COVID-19 pandemic, authored by researchers affiliated with Johns Hopkins University and RAND Corporation. The study utilized county-level data from 2,266 U.S. counties spannin... | [MARKDOWN]medRxiv preprint doi: https://doi.org/10.1101/2025.02.13.25322239; this version posted February 14, 2025. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a ... | [DESC]This medRxiv preprint constitutes a modelling study investigating MMR vaccination coverage in the United States across the timeline of the COVID-19 pandemic, authored by researchers affiliated with Johns Hopkins University and RAND Corporation. The study utilized county-level data from 2,266 U.S. counties spannin... | |
3academic-medicine | academic-medicine | medrxiv_2025_03_31_25324928 | [DESC]This document is a preprint manuscript titled "The effect of SARS-CoV-2 testing on healthcare seeking behaviour at primary care level: implications for COVID-19 vaccine effectiveness estimates in test-negative design studies," authored by researchers including Cheyenne C.E. van Hagen from the National Institute f... | [MARKDOWN]# The effect of SARS-CoV-2 testing on healthcare seeking behaviour at primary care level: implications for COVID-19 vaccine effectiveness estimates in test-negative design studies.
## Manuscript
Cheyenne C.E. van Hagen$^{1}$, Eric R.A. Vos$^{1}$, Charlotte Lanièce Delaunay$^{2}$, Hester E. de Melker$^{1}$, ... | [DESC]This document is a preprint manuscript titled "The effect of SARS-CoV-2 testing on healthcare seeking behaviour at primary care level: implications for COVID-19 vaccine effectiveness estimates in test-negative design studies," authored by researchers including Cheyenne C.E. van Hagen from the National Institute f... | |
3academic-medicine | academic-medicine | medrxiv_2025_03_31_25324962 | [DESC]This document is the title page and header information for a scientific preprint titled "Translational Evidence for Dopaminergic Rewiring of the Basal Ganglia in Persons with Schizophrenia," available on medRxiv and posted on April 1, 2025, with a disclaimer noting it has not been certified by peer review. The wo... | [MARKDOWN]medRxiv preprint doi: https://doi.org/10.1101/2025.03.31.25324962; this version posted April 1, 2025. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-B... | [DESC]This document is the title page and header information for a scientific preprint titled "Translational Evidence for Dopaminergic Rewiring of the Basal Ganglia in Persons with Schizophrenia," available on medRxiv and posted on April 1, 2025, with a disclaimer noting it has not been certified by peer review. The wo... | |
3academic-medicine | academic-medicine | medrxiv_2025_03_31_25324989 | [DESC]This document is a scientific preprint presenting a cross-sectional study titled "Building a culture of developing annual health work plan based on data: Critical health system related factors influencing data utilization in Bukedi region, Uganda." Conducted among 313 healthcare workers in the Bukedi region, the ... | [MARKDOWN]medRxiv preprint doi: https://doi.org/10.1101/2025.03.31.25324989; this version posted April 1, 2025. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-B... | [DESC]This document is a scientific preprint presenting a cross-sectional study titled "Building a culture of developing annual health work plan based on data: Critical health system related factors influencing data utilization in Bukedi region, Uganda." Conducted among 313 healthcare workers in the Bukedi region, the ... | |
3academic-medicine | academic-medicine | medrxiv_2025_04_01_25325011 | [DESC]This document is a scientific preprint titled "A simple feed forward neural network to predict the 2025 outbreak of measles in the USA," posted to medRxiv on April 1, 2025, which outlines research by authors Grace Burtenshaw, Georgina McCallum, Ruethaichanok Kardkasem, Kirsty R. Short, and Meagan Carney from the ... | [MARKDOWN]medRxiv preprint doi: https://doi.org/10.1101/2025.04.01.25325011; this version posted April 1, 2025. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-B... | [DESC]This document is a scientific preprint titled "A simple feed forward neural network to predict the 2025 outbreak of measles in the USA," posted to medRxiv on April 1, 2025, which outlines research by authors Grace Burtenshaw, Georgina McCallum, Ruethaichanok Kardkasem, Kirsty R. Short, and Meagan Carney from the ... | |
3academic-medicine | academic-medicine | medrxiv_2025_04_01_25325022 | [DESC]This document is a medical research preprint titled "Enhancing PET/CT Assessment with Porous 3D-Printed Grids – A Pilot Study," authored by an international team including Sai Kiran Kumar Nalla, Quentin Maronnier, John A. Kennedy, Tala Palchan-Hazan, and Olivier Caselles, representing institutions in France and I... | [MARKDOWN]medRxiv preprint doi: https://doi.org/10.1101/2025.04.01.25325022; this version posted April 1, 2025. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse all... | [DESC]This document is a medical research preprint titled "Enhancing PET/CT Assessment with Porous 3D-Printed Grids – A Pilot Study," authored by an international team including Sai Kiran Kumar Nalla, Quentin Maronnier, John A. Kennedy, Tala Palchan-Hazan, and Olivier Caselles, representing institutions in France and I... | |
3academic-medicine | academic-medicine | medrxiv_2025_04_01_25325047 | [DESC]This medRxiv preprint, titled "Airway Spatial Transcriptomics in Smoking," is a 1,702-word academic article authored by Jarrett D. Morrow, Zaid W. El-Husseini, Jeong H. Yun, and Craig P. Hersh, representing the Channing Division of Network Medicine and Harvard Medical School. Posted on April 3, 2025, the document... | [MARKDOWN]medRxiv preprint doi: https://doi.org/10.1101/2025.04.01.25325047; this version posted April 3, 2025. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-B... | [DESC]This medRxiv preprint, titled "Airway Spatial Transcriptomics in Smoking," is a 1,702-word academic article authored by Jarrett D. Morrow, Zaid W. El-Husseini, Jeong H. Yun, and Craig P. Hersh, representing the Channing Division of Network Medicine and Harvard Medical School. Posted on April 3, 2025, the document... | |
3academic-medicine | academic-medicine | medrxiv_2025_04_02_25325099 | [DESC]This document is a medRxiv preprint of an academic scoping review titled "Insights into motor impairment assessment using myographic signals with artificial intelligence," authored by Wonbum Sohn, M. Hongchul Sohn, and Jongsang Son from the Department of Biomedical Engineering at the New Jersey Institute of Techn... | [MARKDOWN]4 Wonbum Sohn¹, M. Hongchul Sohn²,*, and Jongsang Son¹,*
6 $ {}^{1} $Department of Biomedical Engineering, Newark College of Engineering, New Jersey Institute of
# 1 Insights into motor impairment assessment using myographic signals with artificial intelligence: A scoping review 2
7 Technology, Newark, NJ... | [DESC]This document is a medRxiv preprint of an academic scoping review titled "Insights into motor impairment assessment using myographic signals with artificial intelligence," authored by Wonbum Sohn, M. Hongchul Sohn, and Jongsang Son from the Department of Biomedical Engineering at the New Jersey Institute of Techn... | |
3academic-medicine | academic-medicine | medrxiv_2025_04_02_25325110 | [DESC]This document is a cover page for a medRxiv preprint titled "Neighborhood Socioeconomic Status and Dog-Mediated Rabies: Disparities in Incidence and Surveillance Effort in a Latin American City," authored by researchers including Sherrie Xie and Ricardo Castillo-Neyra from institutions such as the University of P... | [MARKDOWN]medRxiv preprint doi: https://doi.org/10.1101/2025.04.02.25325110; this version posted April 3, 2025. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-B... | [DESC]This document is a cover page for a medRxiv preprint titled "Neighborhood Socioeconomic Status and Dog-Mediated Rabies: Disparities in Incidence and Surveillance Effort in a Latin American City," authored by researchers including Sherrie Xie and Ricardo Castillo-Neyra from institutions such as the University of P... | |
3academic-medicine | academic-medicine | plos_journal_pone_0001610 | [DESC]This document is an academic research article titled "Poor Reporting of Scientific Leadership Information in Clinical Trial Registers," published in the journal PLoS ONE, which examines the extent to which public clinical trial registers adhere to mandatory reporting requirements established by the International ... | [MARKDOWN]OPEN ACCESS Freely available online
PLoS one
# Poor Reporting of Scientific Leadership Information in Clinical Trial Registers
Melanie Sekeres¹,¹¹ᵃ*, Jennifer L. Gold², An-Wen Chan³, Joel Lexchin⁴,¹²,¹³, David Moher⁵,¹⁴, Marleen L. P. Van Laethem⁶, James Maskalyk³,⁷,¹², Lorraine Ferris⁸,¹⁵, Nathan Taback⁹,... | [DESC]This document is an academic research article titled "Poor Reporting of Scientific Leadership Information in Clinical Trial Registers," published in the journal PLoS ONE, which examines the extent to which public clinical trial registers adhere to mandatory reporting requirements established by the International ... | |
3academic-medicine | academic-medicine | plos_journal_pone_0006425 | [DESC]This document is a scientific research article published in PLOS ONE titled "The Impact of National Institutes of Health Funding on U.S. Cardiovascular Disease Research," which analyzes the relationship between federal funding and research output in the field of cardiology. The authors utilized the PubMed databas... | [MARKDOWN]OPEN ACCESS Freely available online
PLoS one
# The Impact of National Institutes of Health Funding on U.S. Cardiovascular Disease Research
Radmila Lyubarova¹, Brandon K. Itagaki²,³, Michael W. Itagaki⁴*
1 Division of Cardiology, Department of Medicine, Albany Medical College, Albany, New York, United Stat... | [DESC]This document is a scientific research article published in PLOS ONE titled "The Impact of National Institutes of Health Funding on U.S. Cardiovascular Disease Research," which analyzes the relationship between federal funding and research output in the field of cardiology. The authors utilized the PubMed databas... | |
3academic-medicine | academic-medicine | plos_journal_pone_0011864 | [DESC]This document is a peer-reviewed research article published in PLOS ONE titled "Time Spent for Activation of Non-Profit Studies in Oncology in Italy" that investigates the efficiency of launching oncological non-profit clinical trials in Italy following recent European regulatory changes. The methodology involved... | [MARKDOWN]OPEN ACCESS Freely available online
PLoS one
# Time Spent for Activation of Non-Profit Studies in Oncology in Italy
Gianfranco De Feo¹, Simona Signoriello², Jane C. Bryce¹, Antonia Del Giudice¹, Giuliana Canzanella¹, Federika Crudele¹, Fiorella Romano¹, Giovanni de Matteis¹, Manuela Florio¹, Fabiano Falasc... | [DESC]This document is a peer-reviewed research article published in PLOS ONE titled "Time Spent for Activation of Non-Profit Studies in Oncology in Italy" that investigates the efficiency of launching oncological non-profit clinical trials in Italy following recent European regulatory changes. The methodology involved... | |
3academic-medicine | academic-medicine | plos_journal_pone_0012484 | [DESC]This peer-reviewed scientific article published in PLoS ONE evaluates the adequacy of methodological reporting within clinical trial registries by analyzing a random sample of 265 actively recruiting randomized clinical trials (RCTs) retrieved from the World Health Organization International Clinical Trials Regis... | [MARKDOWN]OPEN ACCESS Freely available online
PLoS one
# Reporting of Methodologic Information on Trial Registries for Quality Assessment: A Study of Trial Records Retrieved from the WHO Search Portal
Ludovic Reveiz$^{1*}$, An-Wen Chan$^{2}$, Karmela Krleža-Jerić$^{3}$, Carlos Eduardo Granados$^{4}$, Mariona Pinart$... | [DESC]This peer-reviewed scientific article published in PLoS ONE evaluates the adequacy of methodological reporting within clinical trial registries by analyzing a random sample of 265 actively recruiting randomized clinical trials (RCTs) retrieved from the World Health Organization International Clinical Trials Regis... | |
3academic-medicine | academic-medicine | plos_journal_pone_0051039 | [DESC]This document is an academic research article published in *PLoS ONE* in 2012 titled "Efficiency of New Dose Escalation Designs in Dose-Finding Phase I Trials of Molecularly Targeted Agents," which evaluates the real-world performance of various dose-finding methodologies used in first-in-human clinical trials. T... | [MARKDOWN]# Efficiency of New Dose Escalation Designs in Dose-Finding Phase I Trials of Molecularly Targeted Agents
Christophe Le Tourneau $ ^{1,5*} $, Hui K. Gan $ ^{2} $, Albiruni R. A. Razak $ ^{3} $, Xavier Paoletti $ ^{4,5} $
1 Department of Medical Oncology, Institut Curie, Paris, France, 2 Joint Austin-Ludwig ... | [DESC]This document is an academic research article published in *PLoS ONE* in 2012 titled "Efficiency of New Dose Escalation Designs in Dose-Finding Phase I Trials of Molecularly Targeted Agents," which evaluates the real-world performance of various dose-finding methodologies used in first-in-human clinical trials. T... | |
3academic-medicine | academic-medicine | plos_journal_pone_0058711 | [DESC]This document is a systematic review and meta-analysis published in the journal PLOS ONE, titled "Treatment Success in Cancer: Industry Compared to Publicly Sponsored Randomized Controlled Trials," authored by Djulbegovic et al. The study aimed to determine if commercially sponsored trials demonstrate higher succ... | [MARKDOWN]OPEN ACCESS Freely available online
PLOS ONE
# Treatment Success in Cancer: Industry Compared to Publicly Sponsored Randomized Controlled Trials
Benjamin Djulbegovic¹,²,³*, Ambuj Kumar¹,²,³, Branko Miladinovic¹,², Tea Reljic¹,², Sanja Galeb³, Asmita Mhaskar¹,², Rahul Mhaskar¹,², Iztok Hozo⁴, Dongsheng Tu⁵,... | [DESC]This document is a systematic review and meta-analysis published in the journal PLOS ONE, titled "Treatment Success in Cancer: Industry Compared to Publicly Sponsored Randomized Controlled Trials," authored by Djulbegovic et al. The study aimed to determine if commercially sponsored trials demonstrate higher succ... | |
3academic-medicine | academic-medicine | plos_journal_pone_0059910 | [DESC]This research article published in PLOS ONE examines the extent to which clinical trial registry information is utilized during the peer review process to combat selective outcome reporting. By surveying 1,503 corresponding authors and 1,733 reviewers, the study reveals that despite the International Committee of... | [MARKDOWN]OPEN ACCESS Freely available online
PLOS ONE
# Use of Trial Register Information during the Peer Review Process
Sylvain Mathieu$^{1,2}$, An-Wen Chan$^{3}$, Philippe Ravaud$^{1*}$
1 INSERM U738, Centre d'épidémiologie Clinique, French Cochrane Center, University Paris Descartes et Hotel Dieu, Paris, France... | [DESC]This research article published in PLOS ONE examines the extent to which clinical trial registry information is utilized during the peer review process to combat selective outcome reporting. By surveying 1,503 corresponding authors and 1,733 reviewers, the study reveals that despite the International Committee of... | |
3academic-medicine | academic-medicine | plos_journal_pone_0075995 | [DESC]Document Type: Scientific Research Article (Cross-Sectional Study). Summary: This study investigates the extent to which psychiatry journals encourage unbiased reporting of clinical research through their editorial instructions. The authors analyzed author instructions and submission procedures for 123 psychiatry... | [MARKDOWN]OPEN ACCESS Freely available online
PLOS ONE
# How Psychiatry Journals Support the Unbiased Translation of Clinical Research. A Cross-Sectional Study of Editorial Policies
Hannes Knüppel¹, Courtney Metz¹,², Joerg J. Meerpohl³, Daniel Strech¹*
1 Institute of History and Ethics in Medicine, Centre for Ethic... | [DESC]Document Type: Scientific Research Article (Cross-Sectional Study). Summary: This study investigates the extent to which psychiatry journals encourage unbiased reporting of clinical research through their editorial instructions. The authors analyzed author instructions and submission procedures for 123 psychiatry... | |
3academic-medicine | academic-medicine | plos_journal_pone_0079684 | [DESC]This document is a peer-reviewed scientific research article, specifically an observational retrospective cohort study published in PLOS ONE, titled "Description of the Protocols for Randomized Controlled Trials on Cancer Drugs Conducted in Spain (1999–2003)." The study aims to describe the characteristics of ran... | [MARKDOWN]OPEN ACCESS Freely available online
PLOS ONE
# Description of the Protocols for Randomized Controlled Trials on Cancer Drugs Conducted in Spain (1999–2003)
Xavier Bonfill$^{1,2,3}$, Mónica Ballesteros$^{1,4}$, Ignasi Gich$^{1,2,3}$, María Antonia Serrano$^{5}$, Fernando García López$^{6}$, Gerard Urrútia$^... | [DESC]This document is a peer-reviewed scientific research article, specifically an observational retrospective cohort study published in PLOS ONE, titled "Description of the Protocols for Randomized Controlled Trials on Cancer Drugs Conducted in Spain (1999–2003)." The study aims to describe the characteristics of ran... | |
3academic-medicine | academic-medicine | plos_journal_pone_0101826 | [DESC]This document is a scientific research article titled "How Frequently Do the Results from Completed US Clinical Trials Enter the Public Domain?" published in PLOS ONE, which conducts a statistical analysis on 400 randomly selected, completed US clinical trials from the ClinicalTrials.gov database to determine the... | [MARKDOWN]OPEN ACCESS Freely available online
PLOS | ONE
# How Frequently Do the Results from Completed US Clinical Trials Enter the Public Domain? - A Statistical Analysis of the ClinicalTrials.gov Database
Hiroki Saito¹, Christopher J. Gill²,³*
1 Department of Medicine, Carney Hospital, Dorchester, Massachusetts,... | [DESC]This document is a scientific research article titled "How Frequently Do the Results from Completed US Clinical Trials Enter the Public Domain?" published in PLOS ONE, which conducts a statistical analysis on 400 randomly selected, completed US clinical trials from the ClinicalTrials.gov database to determine the... | |
3academic-medicine | academic-medicine | plos_journal_pone_0107803 | [DESC]This scientific research article, published in PLoS ONE by Vinay Prasad and Jeffrey A. Goldstein, investigates the correlation between the US News and World Report cancer hospital rankings and objective measures of research productivity. Addressing prior criticism that these rankings rely too heavily on subjectiv... | [MARKDOWN]# US News and World Report Cancer Hospital Rankings: Do They Reflect Measures of Research Productivity?
Vinay Prasad $ ^{1*} $, Jeffrey A. Goldstein $ ^{2} $
1 Medical Oncology Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America, 2 Pritzker School of Medi... | [DESC]This scientific research article, published in PLoS ONE by Vinay Prasad and Jeffrey A. Goldstein, investigates the correlation between the US News and World Report cancer hospital rankings and objective measures of research productivity. Addressing prior criticism that these rankings rely too heavily on subjectiv... | |
3academic-medicine | academic-medicine | plos_journal_pone_0113654 | [DESC]This document is a research article titled "The Definition of Placebo in the Informed Consent Forms of Clinical Trials," published in PLOS ONE, which investigates how the concept of a placebo is communicated to potential participants in clinical trials to ensure informed consent. The study methods entailed review... | [MARKDOWN]PLOS ONE
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RESEARCH ARTICLE
# The Definition of Placebo in the Informed Consent Forms of Clinical Trials
Astrid Hernández$^{1,2}$, Josep-E. Baños$^{3*}$, Cristina Llop$^{1}$, Magí Farré$^{1,2}$
1. Human Pharmacology Unit, Hospital del Mar Medical Research Institute-IMIM, Barcelo... | [DESC]This document is a research article titled "The Definition of Placebo in the Informed Consent Forms of Clinical Trials," published in PLOS ONE, which investigates how the concept of a placebo is communicated to potential participants in clinical trials to ensure informed consent. The study methods entailed review... | |
3academic-medicine | academic-medicine | plos_journal_pone_0133718 | [DESC]Document Type: Research Article. Summary: This observational study published in PLOS ONE investigates whether mandatory prospective trial registration, mandated by the International Committee of Medical Journal Editors (ICMJE) starting in 2005, has successfully prevented the publication of unregistered trials and... | [MARKDOWN]PLOS ONE
RESEARCH ARTICLE
# Is Mandatory Prospective Trial Registration Working to Prevent Publication of Unregistered Trials and Selective Outcome Reporting? An Observational Study of Five Psychiatry Journals That Mandate Prospective Clinical Trial Registration
Amelia Scott¹, Julia J. Rucklidge¹*, Roger T... | [DESC]Document Type: Research Article. Summary: This observational study published in PLOS ONE investigates whether mandatory prospective trial registration, mandated by the International Committee of Medical Journal Editors (ICMJE) starting in 2005, has successfully prevented the publication of unregistered trials and... | |
3academic-medicine | academic-medicine | plos_journal_pone_0149803 | [DESC]This methodological review research article, published in PLOS ONE, addresses the complexities of testing biomarkers within the context of personalized medicine, specifically focusing on Phase II and Phase III clinical trials. The authors conducted a comprehensive review of 107 studies from the past decade to ana... | [MARKDOWN]PLOS ONE
RESEARCH ARTICLE
# Biomarker-Guided Adaptive Trial Designs in Phase II and Phase III: A Methodological Review
Miranta Antoniou$^{1,2*}$, Andrea L Jorgensen$^{1,2}$, Ruwanthi Kolamunnage-Dona$^{1,2}$
1 MRC North West Hub For Trials Methodology Research, Liverpool, United Kingdom, 2 Department of B... | [DESC]This methodological review research article, published in PLOS ONE, addresses the complexities of testing biomarkers within the context of personalized medicine, specifically focusing on Phase II and Phase III clinical trials. The authors conducted a comprehensive review of 107 studies from the past decade to ana... | |
3academic-medicine | academic-medicine | plos_journal_pone_0167709 | [DESC]This research article published in PLOS ONE investigates the occurrence and determinants of non-publication of clinical drug trials in the Netherlands, analyzing 622 trials reviewed by Institutional Review Boards in 2007 and following 574 viable trials to publication outcomes. The study determined that 58% of the... | [MARKDOWN]PLOS | ONE
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OPEN ACCESS
Citation: van den Bogert CA, Souverein PC, Brekelmans CTM, Janssen SWJ, Koëter GH, Leufkens HGM, et al. (2016) Non-Publication Is Common among Phase 1, Single-Center, Not Prospectively Registered, or Early Terminated Clinical Drug Trials. PLoS ONE 11(12): ... | [DESC]This research article published in PLOS ONE investigates the occurrence and determinants of non-publication of clinical drug trials in the Netherlands, analyzing 622 trials reviewed by Institutional Review Boards in 2007 and following 574 viable trials to publication outcomes. The study determined that 58% of the... | |
3academic-medicine | academic-medicine | plos_journal_pone_0184025 | [DESC]This document is a research article published in the journal PLOS ONE, titled "Time to publication of oncology trials and why some trials are never published," which systematically analyzes the proportion, timing, and reasons for non-publication of clinical oncology trials. The study examined all protocols that c... | [MARKDOWN]PLOS | ONE
# OPEN ACCESS
Citation: Chapman PB, Liu NJ, Zhou Q, Iasonos A, Hanley S, Bosl GJ, et al. (2017) Time to publication of oncology trials and why some trials are never published. PLoS ONE 12(9): e0184025. https://doi.org/10.1371/journal.pone.0184025
Editor: Matthias Briel... | [DESC]This document is a research article published in the journal PLOS ONE, titled "Time to publication of oncology trials and why some trials are never published," which systematically analyzes the proportion, timing, and reasons for non-publication of clinical oncology trials. The study examined all protocols that c... | |
3academic-medicine | academic-medicine | plos_journal_pone_0192413 | [DESC]This research article published in PLoS ONE by Drain et al. investigates the global distribution and migration of clinical research between 2006 and 2012 using data obtained from the open-access registry ClinicalTrials.gov. The study analyzed 89,647 clinical trials comprising 784,585 trial sites across 175 countr... | [MARKDOWN]RESEARCH ARTICLE
# Global migration of clinical research during the era of trial registration
<div style="text-align: center;"><img src="imgs/img_in_image_box_76_506_189_617.jpg" alt="Image" width="8%" /></div>
<div style="text-align: center;"><img src="imgs/img_in_image_box_73_710_96_740.jpg" alt="Image"... | [DESC]This research article published in PLoS ONE by Drain et al. investigates the global distribution and migration of clinical research between 2006 and 2012 using data obtained from the open-access registry ClinicalTrials.gov. The study analyzed 89,647 clinical trials comprising 784,585 trial sites across 175 countr... | |
3academic-medicine | academic-medicine | plos_journal_pone_0194494 | [DESC]This research article published in PLOS ONE by Logviss et al. (2018) evaluates the characteristics of clinical trials for rare versus common diseases in Latvia using data from the EU Clinical Trials Register. The study analyzed 51 interventional trials for rare diseases and a control group of 102 non-rare disease... | [MARKDOWN]PLOS | ONE
OPEN ACCESS
Citation: Logviss K, Krievins D, Purvina S (2018) Characteristics of clinical trials in rare vs. common diseases: A register-based Latvian study. PLoS ONE 13(4): e0194494. https://doi.org/10.1371/journal.pone.0194494
Editor: Gerd Rosenkranz, AUSTRIA
Receiv... | [DESC]This research article published in PLOS ONE by Logviss et al. (2018) evaluates the characteristics of clinical trials for rare versus common diseases in Latvia using data from the EU Clinical Trials Register. The study analyzed 51 interventional trials for rare diseases and a control group of 102 non-rare disease... | |
3academic-medicine | academic-medicine | plos_journal_pone_0196545 | [DESC]This research article, titled "A snapshot of translational research funded by the National Institutes of Health (NIH): A case study using behavioral and social science research awards and Clinical and Translational Science Awards funded publications," investigates the effectiveness of NIH funding in producing tra... | [MARKDOWN]PLOS | ONE
RESEARCH ARTICLE
# A snapshot of translational research funded by the National Institutes of Health (NIH): A case study using behavioral and social science research awards and Clinical and Translational Science Awards funded publications
Xueying Han*, Sharon R. Williams, Brian L. Zuckerman
Scie... | [DESC]This research article, titled "A snapshot of translational research funded by the National Institutes of Health (NIH): A case study using behavioral and social science research awards and Clinical and Translational Science Awards funded publications," investigates the effectiveness of NIH funding in producing tra... | |
3academic-medicine | academic-medicine | plos_journal_pone_0210163 | [DESC]This research article, titled "Did relaxing clinical trial regulation enhance the stock of scientific knowledge in India? Not necessarily," published in PLOS ONE by Bastian Rake and Carolin Haeussler, investigates the consequences of deregulating clinical trials in India on the domestic scientific knowledge base.... | [MARKDOWN]PLOS ONE
RESEARCH ARTICLE
# Did relaxing clinical trial regulation enhance the stock of scientific knowledge in India? Not necessarily
Bastian Rake¹*, Carolin Haeussler²
1 School of Business, Maynooth University, Maynooth, Co Kildare, Ireland, 2 Chair of Organisation, Technology Management and Entrepreneu... | [DESC]This research article, titled "Did relaxing clinical trial regulation enhance the stock of scientific knowledge in India? Not necessarily," published in PLOS ONE by Bastian Rake and Carolin Haeussler, investigates the consequences of deregulating clinical trials in India on the domestic scientific knowledge base.... | |
3academic-medicine | academic-medicine | plos_journal_pone_0218534 | [DESC]The provided document is a research article titled "Lower-dose prescriptions in the post-marketing situation and the influencing factors thereon," published in *PLOS ONE* in 2019 by researchers including Akiko Ogata from Kitasato University and the Pharmaceuticals and Medical Devices Agency. The study investigate... | [MARKDOWN]PLOS ONE
RESEARCH ARTICLE
# Lower-dose prescriptions in the post-marketing situation and the influencing factors thereon
**Akiko Ogata\*, Masayuki Kaneko, Mamoru Narukawa**
Department of Clinical Medicine (Pharmaceutical Medicine), Graduate School of Pharmaceutical Sciences, Kitasato University, Tokyo, Ja... | [DESC]The provided document is a research article titled "Lower-dose prescriptions in the post-marketing situation and the influencing factors thereon," published in *PLOS ONE* in 2019 by researchers including Akiko Ogata from Kitasato University and the Pharmaceuticals and Medical Devices Agency. The study investigate... | |
3academic-medicine | academic-medicine | plos_journal_pone_0234911 | [DESC]This document is a Research Article titled "Clinical development success rates and social value of pediatric Phase 1 trials in oncology" published in PLOS ONE by Mateusz T. Wasylewski et al., which aims to assess the social value of pediatric Phase 1 oncology trials using surrogates such as approval rates, transi... | [MARKDOWN]PLOS ONE
RESEARCH ARTICLE
# Clinical development success rates and social value of pediatric Phase 1 trials in oncology
Mateusz T. Wasylewski¹, Karolina Strzebonska¹, Magdalena Koperny¹, Maciej Polak¹,², Jonathan Kimmelman³, Marcin Waligora¹*
1 Dept. of Philosophy and Bioethics, REMEDY, Research Ethics in... | [DESC]This document is a Research Article titled "Clinical development success rates and social value of pediatric Phase 1 trials in oncology" published in PLOS ONE by Mateusz T. Wasylewski et al., which aims to assess the social value of pediatric Phase 1 oncology trials using surrogates such as approval rates, transi... | |
3academic-medicine | academic-medicine | plos_journal_pone_0263001 | [DESC]This research article, published in PLOS ONE, evaluates the impact of the COVID-19 pandemic on global scientific production in the life sciences by analyzing 3.6 million research papers in the PubMed database using a difference-in-differences approach. The study reveals a massive disparity in research output foll... | [MARKDOWN]RESEARCH ARTICLE
# The impact of the COVID-19 pandemic on scientific research in the life sciences
Massimo Riccaboni $ ^{1} $, Luca Verginer $ ^{2*} $
1 AXES, IMT School for Advanced Studies Lucca, Lucca, Italy, 2 Chair of Systems Design D-MTEC, ETH Zürich, Zurich, Switzerland
<div style="text-align: cent... | [DESC]This research article, published in PLOS ONE, evaluates the impact of the COVID-19 pandemic on global scientific production in the life sciences by analyzing 3.6 million research papers in the PubMed database using a difference-in-differences approach. The study reveals a massive disparity in research output foll... | |
3academic-medicine | academic-medicine | plos_journal_pone_0263193 | [DESC]This document is a Research Article titled "Prediction of clinical trial enrollment rates" by Bieganek, Aliferis, and Ma, published in PLOS ONE, which addresses the critical challenge of poor patient recruitment in clinical trials that often results in trial failures and wasted resources. The authors leveraged a ... | [MARKDOWN]PLOS ONE
RESEARCH ARTICLE
# Prediction of clinical trial enrollment rates
Cameron Bieganek¹, Constantin Aliferis¹,², Sisi Ma¹,²*
1 Institute for Health Informatics, University of Minnesota, Minneapolis, MN, United States of America,
2 Department of Medicine, University of Minnesota, Minneapolis, MN, Unite... | [DESC]This document is a Research Article titled "Prediction of clinical trial enrollment rates" by Bieganek, Aliferis, and Ma, published in PLOS ONE, which addresses the critical challenge of poor patient recruitment in clinical trials that often results in trial failures and wasted resources. The authors leveraged a ... | |
3academic-medicine | academic-medicine | plos_journal_pone_0271819 | [DESC]This research article published in PLOS ONE examines changes in key recruitment performance metrics for industry-sponsored phase III clinical trials registered at ClinicalTrials.gov between 2008 and 2019, utilizing the AACT database to analyze trends in trial duration, site numbers, and participant enrollment acr... | [MARKDOWN]PLOS ONE
# OPEN ACCESS
Citation: Brøgger-Mikkelsen M, Zibert JR, Andersen AD, Lassen U, Hædersdal M, Ali Z, et al. (2022) Changes in key recruitment performance metrics from 2008–2019 in industry-sponsored phase III clinical trials registered at ClinicalTrials.gov. PLoS ONE 17(7):... | [DESC]This research article published in PLOS ONE examines changes in key recruitment performance metrics for industry-sponsored phase III clinical trials registered at ClinicalTrials.gov between 2008 and 2019, utilizing the AACT database to analyze trends in trial duration, site numbers, and participant enrollment acr... | |
3academic-medicine | academic-medicine | plos_journal_pone_0281518 | [DESC]This PLOS ONE research article, titled "Reduction strategies for inpatient oral third-generation cephalosporins at a cancer center: An interrupted time-series analysis," details a retrospective 60-month study conducted between April 2017 and March 2022 aimed at curbing the use of oral third-generation cephalospor... | [MARKDOWN]PLOS ONE
# OPEN ACCESS
Citation: Itoh N, Kawabata T, Akazawa N, Kawamura D, Murakami H, Ishibana Y, et al. (2023) Reduction strategies for inpatient oral third-generation cephalosporins at a cancer center: An interrupted time-series analysis. PLoS ONE 18(2): e0281518. https://doi.... | [DESC]This PLOS ONE research article, titled "Reduction strategies for inpatient oral third-generation cephalosporins at a cancer center: An interrupted time-series analysis," details a retrospective 60-month study conducted between April 2017 and March 2022 aimed at curbing the use of oral third-generation cephalospor... | |
3academic-medicine | academic-medicine | plos_journal_pone_0301917 | [DESC]This research article published in PLOS ONE investigates the implementation and predictors of Individual Participant Data (IPD) sharing within the scientific community, utilizing a comprehensive analysis of 313,990 studies from ClinicalTrials.gov between 2000 and 2023. The results indicate a significant gap betwe... | [MARKDOWN]PLOS ONE
RESEARCH ARTICLE
# Breaking the silence of sharing data in medical research
Henian Chen*, Yayi Zhao, Biwei Cao, Donna J. Petersen, Matthew J. Valente, Weiliang Cen
College of Public Health, University of South Florida, Tampa, FL, United States of America
* hchen1@usf.edu
## Abstract
Data shari... | [DESC]This research article published in PLOS ONE investigates the implementation and predictors of Individual Participant Data (IPD) sharing within the scientific community, utilizing a comprehensive analysis of 313,990 studies from ClinicalTrials.gov between 2000 and 2023. The results indicate a significant gap betwe... | |
3academic-medicine | academic-medicine | plos_journal_pone_0305027 | [DESC]This PLOS ONE research article, published on November 22, 2024, constitutes a cross-sectional analysis titled "Discrepancies between pre-specified and reported primary outcomes: A cross-sectional analysis of randomized controlled trials in gastroenterology and hepatology journals" authored by Bing-Han Shang and a... | [MARKDOWN]PLOS ONE
# OPEN ACCESS
Citation: Shang B-H, Yang F-H, Lin Y, Bialka S, Rensburg DCJv, Tonelli AR, et al. (2024) Discrepancies between pre-specified and reported primary outcomes: A cross-sectional analysis of randomized controlled trials in gastroenterology and hepatology journals... | [DESC]This PLOS ONE research article, published on November 22, 2024, constitutes a cross-sectional analysis titled "Discrepancies between pre-specified and reported primary outcomes: A cross-sectional analysis of randomized controlled trials in gastroenterology and hepatology journals" authored by Bing-Han Shang and a... | |
3academic-medicine | academic-medicine | plos_journal_pone_0311510 | [DESC]This document is a research article titled "Harnessing explainable artificial intelligence for patient-to-clinical-trial matching: A proof-of-concept pilot study using phase I oncology trials," published in PLOS ONE. The study addresses efficiency challenges in patient recruitment for drug development by developi... | [MARKDOWN]RESEARCH ARTICLE
# Harnessing explainable artificial intelligence for patient-to-clinical-trial matching: A proof-of-concept pilot study using phase I oncology trials
<div style="text-align: center;"><img src="imgs/img_in_image_box_77_506_188_616.jpg" alt="Image" width="8%" /></div>
<div style="text-align... | [DESC]This document is a research article titled "Harnessing explainable artificial intelligence for patient-to-clinical-trial matching: A proof-of-concept pilot study using phase I oncology trials," published in PLOS ONE. The study addresses efficiency challenges in patient recruitment for drug development by developi... | |
3academic-medicine | academic-medicine | plos_journal_pone_0312797 | [DESC]This document is a research article titled "Seamless trials in oncology: A cross-sectional analysis of characteristics and reporting," published in the journal PLOS ONE by researchers from the Jagiellonian University Medical College in Krakow, Poland. The study addresses the growing importance of seamless clinica... | [MARKDOWN]PLOS ONE
OPEN ACCESS
Citation: Klas K, Strzebonska K, Buedo P, Włodarczyk A, Gordon S, Kaszuba P, et al. (2024) Seamless trials in oncology: A cross-sectional analysis of characteristics and reporting. PLoS ONE 19(12): e0312797. https://doi.org/10.1371/journal.pone.0312797
Editor... | [DESC]This document is a research article titled "Seamless trials in oncology: A cross-sectional analysis of characteristics and reporting," published in the journal PLOS ONE by researchers from the Jagiellonian University Medical College in Krakow, Poland. The study addresses the growing importance of seamless clinica... | |
3academic-medicine | academic-medicine | plos_journal_pone_0313340 | [DESC]This document is a research article published in PLOS One titled "Improving patient satisfaction based on service quality in clinical trials: A cross-sectional study." The study addresses the gap in understanding how service quality perceptions impact participant satisfaction in clinical trials, a factor crucial ... | [MARKDOWN]PLOS ONE
RESEARCH ARTICLE
# Improving patient satisfaction based on service quality in clinical trials: A cross-sectional study
Go-Eun Lee¹, Sue Kim¹,², Sang Hui Chu¹,², Jeong-Ho Seok³,⁴, So Yoon Kim⁵,⁶, Sanghee Kim¹,²*
1 College of Nursing, Yonsei University, Seoul, Republic of Korea, 2 Mo-Im Kim Nursing... | [DESC]This document is a research article published in PLOS One titled "Improving patient satisfaction based on service quality in clinical trials: A cross-sectional study." The study addresses the gap in understanding how service quality perceptions impact participant satisfaction in clinical trials, a factor crucial ... | |
3academic-medicine | academic-medicine | plos_journal_pone_0323109 | [DESC]This document is a research article titled "Assessing compliance to reporting mandates in glioblastoma-related clinical trials," published in PLOS One in May 2025. The study investigates the critical need for accurate and timely scientific reporting in clinical research, specifically focusing on the low complianc... | [MARKDOWN]PLOS One
RESEARCH ARTICLE
# Assessing compliance to reporting mandates in glioblastoma-related clinical trials
Nicholas Kendall¹, Julian S. Rechberger², Abdelrahman M. Hamouda²*, Mark Cwajna³, Sherief Ghozy²,⁴, Kogulavadanan Arumaithurai⁵, David F. Kallmes⁴
1 The University of South Dakota Sanford School ... | [DESC]This document is a research article titled "Assessing compliance to reporting mandates in glioblastoma-related clinical trials," published in PLOS One in May 2025. The study investigates the critical need for accurate and timely scientific reporting in clinical research, specifically focusing on the low complianc... | |
3academic-medicine | academic-medicine | plos_journal_pone_0335932 | [DESC]This document is a study protocol for a clinical trial titled "The efficacy and safety of lignocaine-embedded dissolvable microneedle versus EMLA for topical analgesia in adults undergoing venepuncture." The research, conducted at Hospital Canselor Tuanku Muhriz in Kuala Lumpur, Malaysia, aims to evaluate a novel... | [MARKDOWN]PLOS One
STUDY PROTOCOL
# The efficacy and safety of lignocaine-embedded dissolvable microneedle versus EMLA for topical analgesia in adults undergoing venepuncture: A single-centre, parallel-group, double-blind randomised clinical trial protocol in a tertiary care setting
Muhammad Irfan Abdul Jalal¹*, Mun... | [DESC]This document is a study protocol for a clinical trial titled "The efficacy and safety of lignocaine-embedded dissolvable microneedle versus EMLA for topical analgesia in adults undergoing venepuncture." The research, conducted at Hospital Canselor Tuanku Muhriz in Kuala Lumpur, Malaysia, aims to evaluate a novel... | |
3academic-medicine | academic-medicine | plos_journal_pone_0339163 | [DESC]Document Type: Study Protocol. This study protocol outlines a feasibility randomized controlled trial designed to adapt and evaluate digital dialectical behaviour therapy (d-DBT) for youth at clinical high risk (CHR) for psychosis. Recognizing that this demographic frequently experiences emotional dysregulation, ... | [MARKDOWN]PLOS One
STUDY PROTOCOL
# Adaptation and evaluation of a digital dialectical behaviour therapy for youth at clinical high risk for psychosis: A protocol for a feasibility randomized controlled trial
Thea Lynne Hedemann¹,², Yun Lu¹, Sofia Campitelli¹, Lisa D. Hawke¹,², Nelson Shen¹,², Sarah Saperia¹, Brett ... | [DESC]Document Type: Study Protocol. This study protocol outlines a feasibility randomized controlled trial designed to adapt and evaluate digital dialectical behaviour therapy (d-DBT) for youth at clinical high risk (CHR) for psychosis. Recognizing that this demographic frequently experiences emotional dysregulation, ... | |
3academic-medicine | academic-medicine | plos_journal_pone_0346878 | [DESC]The document is a research article titled "Bayesian reanalysis of early remdesivir for the treatment of COVID-19 in outpatients with high risk of progression to severe disease." The study addresses the underutilization of Bayesian methods in clinical trials by reanalyzing data from the PINETREE Phase 3 randomized... | [MARKDOWN]RESEARCH ARTICLE
# Bayesian reanalysis of early remdesivir for the treatment of COVID-19 in outpatients with high risk of progression to severe disease
<div style="text-align: center;"><img src="imgs/img_in_image_box_78_590_190_701.jpg" alt="Image" width="8%" /></div>
## OPEN ACCESS
<div style="text-alig... | [DESC]The document is a research article titled "Bayesian reanalysis of early remdesivir for the treatment of COVID-19 in outpatients with high risk of progression to severe disease." The study addresses the underutilization of Bayesian methods in clinical trials by reanalyzing data from the PINETREE Phase 3 randomized... | |
0academic-bio | academic-bio | arxiv_2606.03669v1 | [DESC]This document is a scientific research preprint titled "Bistability of cellular traction on strain-stiffening substrates" by Irina Pi-Jaumà, Jaume Casademunt, and Ricard Alert, which explores the complex mechanical interplay between cells and their surrounding environment. The authors focus on the bidirectional f... | [MARKDOWN]# Bistability of cellular traction on strain-stiffening substrates
Irina Pi-Jaumà, $ ^{1,2} $ Jaume Casademunt, $ ^{1,2} $ and Ricard Alert $ ^{1,2,3,4,5,6,*} $
$ ^{2} $Universitat de Barcelona Institute of Complex Systems (UBICS), 08028 Barcelona, Spain
$ ^{3} $Institució Catalana de Recerca i Estudis A... | [DESC]This document is a scientific research preprint titled "Bistability of cellular traction on strain-stiffening substrates" by Irina Pi-Jaumà, Jaume Casademunt, and Ricard Alert, which explores the complex mechanical interplay between cells and their surrounding environment. The authors focus on the bidirectional f... | |
0academic-bio | academic-bio | arxiv_2606.05227v1 | [DESC]This is a scientific manuscript, specifically an "Article," which appears to be a pre-print from arXiv (indicated by the sidebar text). The document investigates the biophysical properties of stomatocytes, a type of cup-shaped red blood cell (RBC) associated with Hereditary Stomatocytosis (HS). The study addresse... | [MARKDOWN]# Quantifying the biophysical properties of stomatocytes in health and disease
Zhaojie Chai $ ^{1,*} $, Jianlu Zheng $ ^{2} $, He Li $ ^{3} $, Ming Dao $ ^{2,*} $, and George Em Karniadakis $ ^{1,*} $
$ ^{1} $Division of Applied Mathematics, Brown University, Providence, Rhode Island, United States
$ ^{2... | [DESC]This is a scientific manuscript, specifically an "Article," which appears to be a pre-print from arXiv (indicated by the sidebar text). The document investigates the biophysical properties of stomatocytes, a type of cup-shaped red blood cell (RBC) associated with Hereditary Stomatocytosis (HS). The study addresse... | |
0academic-bio | academic-bio | arxiv_2606.10355v1 | [DESC]The provided text is a scientific research paper and arXiv preprint titled "Mean-field models for morphogenetic processes in physiological contexts" authored by D. Hernández, Alejandro Valdés López, and E. C. Herrera-Hernández. The study introduces a biophysical formalism designed to describe the spatiotemporal e... | [MARKDOWN]# Mean-field models for morphogenetic processes in physiological contexts
D. Hernández
Posgrado en Ciencias de la Complejidad, Universidad Autónoma de la Ciudad de México, San Lorenzo 290, esquina Roberto Gayol, Col. del Valle Sur, Benito Juárez, CDMX, 03100, México
Alejandro Valdés López and E. C. Herrera... | [DESC]The provided text is a scientific research paper and arXiv preprint titled "Mean-field models for morphogenetic processes in physiological contexts" authored by D. Hernández, Alejandro Valdés López, and E. C. Herrera-Hernández. The study introduces a biophysical formalism designed to describe the spatiotemporal e... | |
0academic-bio | academic-bio | arxiv_2606.10878v1 | [DESC]This document is a scientific research paper (specifically an arXiv preprint) titled "Spontaneous polarization for protrusion-driven cell crawling" by P. Recho. The study proposes a minimal one-dimensional continuum model that simulates the spontaneous initiation of cell crawling on a rigid substrate by represent... | [MARKDOWN]# Spontaneous polarization for protrusion-driven cell crawling
P. Recho
LIPhy, CNRS-UMR 5588, Université Grenoble Alpes, F-38000 Grenoble, France $ {}^{*} $ (Dated: June 10, 2026)
We propose a minimal one-dimensional continuum model for the spontaneous initiation of protrusion-driven cell crawling on a ri... | [DESC]This document is a scientific research paper (specifically an arXiv preprint) titled "Spontaneous polarization for protrusion-driven cell crawling" by P. Recho. The study proposes a minimal one-dimensional continuum model that simulates the spontaneous initiation of cell crawling on a rigid substrate by represent... | |
0academic-bio | academic-bio | arxiv_2606.13047v1 | [DESC]This document is the title page and accepted manuscript of a peer-reviewed academic article titled "Irregular Curvature at Focal Adhesions Modulates Piezo1 Activity and Low-Frequency Ultrasound–Induced Apoptosis in Cancer Cells," published in Physics of Life Reviews in 2026. Authored by Ivana Pajic-Lijakovic, Mil... | [MARKDOWN]This is the peer-reviewed, accepted manuscript of the following article: Pajic-Lijakovic I, Milivojevic M, Martinac B, McClintock V.E.P. 2026. Irregular Curvature at Focal Adhesions Modulates Piezo1 Activity and Low-Frequency Ultrasound—Induced Apoptosis in Cancer Cells, Physics of Life Reviews, 10.1016/j.plr... | [DESC]This document is the title page and accepted manuscript of a peer-reviewed academic article titled "Irregular Curvature at Focal Adhesions Modulates Piezo1 Activity and Low-Frequency Ultrasound–Induced Apoptosis in Cancer Cells," published in Physics of Life Reviews in 2026. Authored by Ivana Pajic-Lijakovic, Mil... | |
0academic-bio | academic-bio | arxiv_2606.13890v1 | [DESC]This academic research paper titled "Mean First Passage Time for Persistent Random Walks in Annular Search Domains" by Fatemeh Saghafifar and Daniel Coombs investigates the stochastic migration of immune cells, specifically natural killer cells, toward a target cancer cell within a confined two-dimensional annula... | [MARKDOWN]# Mean First Passage Time for Persistent Random Walks in Annular Search Domains *
Fatemeh Saghafifar† and Daniel Coombs‡
Abstract. We study the mean first-passage time of a random walker to a small absorbing target at the center of a two-dimensional annulus with a specularly reflecting outer boundary. The p... | [DESC]This academic research paper titled "Mean First Passage Time for Persistent Random Walks in Annular Search Domains" by Fatemeh Saghafifar and Daniel Coombs investigates the stochastic migration of immune cells, specifically natural killer cells, toward a target cancer cell within a confined two-dimensional annula... | |
0academic-bio | academic-bio | arxiv_2606.17891v1 | [DESC]This document is an academic research paper, specifically an arXiv preprint titled "A nonlinear theory for chemotactic fronts of mixed populations," authored by scholars from the University of Oxford and the University of Bristol that explores the collective migration of heterogeneous cell populations—a process e... | [MARKDOWN]# A nonlinear theory for chemotactic fronts of mixed populations
Giulia L. Celora $ ^{1,2,*} $, Marjorie Watts $ ^{1} $, Carles Falcó $ ^{1} $, Mohit P. Dalwadi $ ^{1} $
$ ^{1} $Mathematical Institute, University of Oxford, OX2 6GG Oxford, United Kingdom
$ ^{2} $School of Mathematics, University of Brist... | [DESC]This document is an academic research paper, specifically an arXiv preprint titled "A nonlinear theory for chemotactic fronts of mixed populations," authored by scholars from the University of Oxford and the University of Bristol that explores the collective migration of heterogeneous cell populations—a process e... | |
0academic-bio | academic-bio | arxiv_2606.22440v1 | [DESC]This document is a scientific research paper titled "Data-driven geometric phase in biological locomotion" authored by Pyae Hein Htet and Kenta Ishimoto that investigates the application of gauge theory to biological movement. The authors address the difficulty of connecting the theoretical quantity of geometric ... | [MARKDOWN]# Data-driven geometric phase in biological locomotion
Pyae Hein Htet $ ^{1} $ and Kenta Ishimoto $ ^{1,\otimes} $
$ ^{1} $Department of Mathematics, Kyoto University, Kyoto 606-8502, Japan (Dated: June 23, 2026)
Geometric phase quantifies net locomotion in dissipative media via gauge theory, but linking ... | [DESC]This document is a scientific research paper titled "Data-driven geometric phase in biological locomotion" authored by Pyae Hein Htet and Kenta Ishimoto that investigates the application of gauge theory to biological movement. The authors address the difficulty of connecting the theoretical quantity of geometric ... | |
0academic-bio | academic-bio | arxiv_2606.23114v1 | [DESC]This document is an academic preprint titled "Circadian output network can buffer period variability" by researchers at Kyushu University which investigates the mechanisms by which biological systems maintain reliable 24-hour rhythms despite inherent molecular noise. Utilizing mathematical models of self-sustaine... | [MARKDOWN]arXiv:2606.23114v1 [q-bio.MN] 22 Jun 2026
# Circadian output network can buffer period variability
Ismail M Nur¹, Hotaka Kaji¹, Yuzuru Mitsui¹, Hiroshi Ito¹,*
1 Faculty of Design, Kyushu University, Fukuoka, Japan
* hito@design.kyushu-u.ac.jp
## Abstract
Circadian rhythms are biological oscillations tha... | [DESC]This document is an academic preprint titled "Circadian output network can buffer period variability" by researchers at Kyushu University which investigates the mechanisms by which biological systems maintain reliable 24-hour rhythms despite inherent molecular noise. Utilizing mathematical models of self-sustaine... | |
1academic-crosstopic | academic-crosstopic | arxiv_2606.23957v1 | [DESC]This document is an arXiv preprint titled "Learning the Koopman Operator Using Attention Free Transformers" authored by Mohammed Nagdi and colleagues, which addresses the challenge of long-horizon drift in Koopman autoencoders (KAEs) where predictions often fail due to phase slips or amplitude errors in nonlinear... | [MARKDOWN]arXiv:2606.23957v1 [cs.LG] 22 Jun 2026
# LEARNING THE KOOPMAN OPERATOR USING ATTENTION FREE TRANSFORMERS
Mohammed Nagdi¹, Evangelos-Marios Nikolados¹, Alexey Yermakov², Mars Gao³, Nathan Kutz² & Filippo Menolascina¹
¹ Institute for Bioengineering, School of Engineering and Centre for Engineering Biology, U... | [DESC]This document is an arXiv preprint titled "Learning the Koopman Operator Using Attention Free Transformers" authored by Mohammed Nagdi and colleagues, which addresses the challenge of long-horizon drift in Koopman autoencoders (KAEs) where predictions often fail due to phase slips or amplitude errors in nonlinear... | |
0academic-bio | academic-bio | arxiv_2606.24246v1 | [DESC]This academic research paper introduces a computational framework for analyzing large chemical reaction networks, addressing the lack of quantitative theory required to understand complex metabolic behaviors and the origin of life. Utilizing a scale-splitting algorithm inspired by Wilson’s renormalization group, ... | [MARKDOWN]Hierarchical models for large chemical reaction networks
# Hierarchical models for large chemical reaction networks
Jérémie Unterberger,¹,ᵃ⁾ Ulysse Herbach,² and Roxane Cellier²
¹⁾Université de Lorraine, CNRS, IECL, F-54000 Nancy, France
²⁾Université de Lorraine, CNRS, Inria, IECL, F-54000 Nancy, France
(... | [DESC]This academic research paper introduces a computational framework for analyzing large chemical reaction networks, addressing the lack of quantitative theory required to understand complex metabolic behaviors and the origin of life. Utilizing a scale-splitting algorithm inspired by Wilson’s renormalization group, ... | |
1academic-crosstopic | academic-crosstopic | arxiv_2606.27939v1 | [DESC]This document is a research paper, specifically an arXiv preprint (arXiv:2606.27939v1) accepted for the 2026 Workshop on Generative and Agentic AI for Biology (ICML 2026), titled "Two-Stage Fine-Tuning for Protein Sequence Generation with Targeted Amino-Acid Composition." The authors address the limitation of sta... | [MARKDOWN]arXiv:2606.27939v1 [cs.LG] 26 Jun 2026
# Two-Stage Fine-Tuning for Protein Sequence Generation with Targeted Amino-Acid Composition
Violeta Basten-Romero ¹ ² Rubén Muñoz-Tafalla ¹ Anna María Díaz-Rovira ¹ Bertran Miquel-Oliver ¹ ² Isaac Filella-Merce ¹ ³ Víctor Guallar ¹ ³ ⁴
## Abstract
Protein language m... | [DESC]This document is a research paper, specifically an arXiv preprint (arXiv:2606.27939v1) accepted for the 2026 Workshop on Generative and Agentic AI for Biology (ICML 2026), titled "Two-Stage Fine-Tuning for Protein Sequence Generation with Targeted Amino-Acid Composition." The authors address the limitation of sta... | |
1academic-crosstopic | academic-crosstopic | arxiv_2606.28459v1 | [DESC]This document is an academic research paper, specifically an arXiv preprint, introducing scKDGM, a novel framework for single-cell RNA sequencing (scRNA-seq) clustering. The authors address critical limitations in current clustering methods, such as sensitivity to noise caused by high dimensionality and sparsity,... | [MARKDOWN]arXiv:2606.28459v1 [cs.LG] 26 Jun 2026
# scKDGM: KAN-guided Dynamic Graph Masked Learning for Single-Cell RNA-seq Clustering
Jun Tang*, Pengwei Hu†*, Sicong Gao*, Jie Guo*, Lun Hu†, Xin Luo*
* College of Computer and Information Science, Southwest University, Chongqing, China
Email: swutangjun@email.swu.e... | [DESC]This document is an academic research paper, specifically an arXiv preprint, introducing scKDGM, a novel framework for single-cell RNA sequencing (scRNA-seq) clustering. The authors address critical limitations in current clustering methods, such as sensitivity to noise caused by high dimensionality and sparsity,... | |
1academic-crosstopic | academic-crosstopic | arxiv_2606.29949v1 | [DESC]This document is an arXiv research paper titled "Data-Efficient Multimodal Alignment for Histopathology-based Molecular Prediction" which proposes a solution to bridge the gap between widely available but molecularly vague H&E-stained whole-slide images and expensive, often unavailable RNA-seq data. The authors i... | [MARKDOWN]arXiv:2606.29949v1 [eess.IV] 29 Jun 2026
# Data-Efficient Multimodal Alignment for Histopathology-based Molecular Prediction
Dominik Winter¹, Dominik Vonficht¹, Loïc Le Bescond¹, Christian Gebbe¹, Marco Rosati¹, Richard J. Chen¹, Markus Schick¹, Ross Stewart², and Nicolas Brieu¹
¹ AstraZeneca Computational... | [DESC]This document is an arXiv research paper titled "Data-Efficient Multimodal Alignment for Histopathology-based Molecular Prediction" which proposes a solution to bridge the gap between widely available but molecularly vague H&E-stained whole-slide images and expensive, often unavailable RNA-seq data. The authors i... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.01307v1 | [DESC]This document is an academic research paper presented as an arXiv preprint titled "A Novel Machine Learning Approach for Central Nervous System Tumor Classification from DNA Methylation," which addresses the challenges of cross-cohort transferability and robust multiclass evaluation in CNS tumor diagnosis. The au... | [MARKDOWN]arXiv:2607.01307v1 [cs.LG] 1 Jul 2026
# A Novel Machine Learning Approach for Central Nervous System Tumor Classification from DNA Methylation
Paulo R. Ferreira-Jr.¹, Lucas Coutinho Freitas¹, Laís dos Santos Gonçalves¹, William Borges Domingues¹, Lucas Petitemberte de Souza¹, Mariana B. Michalowski², and Vi... | [DESC]This document is an academic research paper presented as an arXiv preprint titled "A Novel Machine Learning Approach for Central Nervous System Tumor Classification from DNA Methylation," which addresses the challenges of cross-cohort transferability and robust multiclass evaluation in CNS tumor diagnosis. The au... | |
0academic-bio | academic-bio | arxiv_2607.01725v1 | [DESC]Document Type: Scientific Preprint/Research Paper. Summary: This study introduces GlycoMAC, a multiscale mechanistic framework designed to predict glycosylation trajectories in Chinese hamster ovary (CHO) cell cultures, addressing the challenge that antibody productivity and glycosylation quality are coupled outc... | [MARKDOWN]arXiv:2607.01725v1 [q-bio.CB] 2 Jul 2026
# GLYCOMAC: A MULTISCALE METABOLIC–GLYCOSYLATION FRAMEWORK FOR PREDICTING GLYCOSYLATION ACROSS CONDITIONS IN MAMMALIAN CELL CULTURES
Yuming Zeng¹, Sarah W. Harcum *,², Jinxiang Pei¹, and Wei Xie †,¹
¹Department of Mechanical and Industrial Engineering, Northeastern ... | [DESC]Document Type: Scientific Preprint/Research Paper. Summary: This study introduces GlycoMAC, a multiscale mechanistic framework designed to predict glycosylation trajectories in Chinese hamster ovary (CHO) cell cultures, addressing the challenge that antibody productivity and glycosylation quality are coupled outc... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.01982v1 | [DESC]This document is the first page of an academic research paper titled "MolSight: A Graph-Aware Vision-Language Model for Unified Chemical Image Understanding" authored by researchers from Renmin University of China. The paper introduces MolSight, a graph-aware vision-language model framework designed to improve mo... | [MARKDOWN]# MolSight: A Graph-Aware Vision-Language Model for Unified Chemical Image Understanding
Wenda Wang
Renmin University of China
Beijing
wangwenda87@ruc.edu.cn
Yihan Tong
Renmin University of China
Beijing
Yuwei Hu
Renmin University of China
Beijing
Zhewei Wei *
Renmin University of China
Beijing
... | [DESC]This document is the first page of an academic research paper titled "MolSight: A Graph-Aware Vision-Language Model for Unified Chemical Image Understanding" authored by researchers from Renmin University of China. The paper introduces MolSight, a graph-aware vision-language model framework designed to improve mo... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.02552v1 | [DESC]This arXiv preprint (arXiv:2607.02552v1) titled "Enabling Fast, Efficient, and Low-Cost Genomic and Metagenomic Analyses via Storage-Centric System Designs" presents a study by Nika Mansouri Ghiasi and Onur Mutlu from ETH Zürich focused on overcoming the data movement and data preparation bottlenecks inherent in ... | [MARKDOWN]arXiv:2607.02552v1 [cs.AR] 26 Jun 2026
# Enabling Fast, Efficient, and Low-Cost Genomic and Metagenomic Analyses via Storage-Centric System Designs
Nika Mansouri Ghiasi Onur Mutlu
SAFARI Research Group
ETH Zürich
## Abstract
Due to the challenges of analyzing and storing massive volumes of genomic and m... | [DESC]This arXiv preprint (arXiv:2607.02552v1) titled "Enabling Fast, Efficient, and Low-Cost Genomic and Metagenomic Analyses via Storage-Centric System Designs" presents a study by Nika Mansouri Ghiasi and Onur Mutlu from ETH Zürich focused on overcoming the data movement and data preparation bottlenecks inherent in ... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.03007v1 | [DESC]Document Type: Academic Preprint. Summary: This research paper, authored by members of the Gaoling School of Artificial Intelligence at Renmin University of China, critiques the reliance of current molecular Large Language Models (LLMs) on text-based data which fails to provide reliable structural grounding, ofte... | [MARKDOWN]arXiv:2607.03007v1 [cs.LG] 3 Jul 2026
# Back to Basics: Improving Molecular Understanding in LLMs via SMILES–Graph Translation
## Wenda Wang
Gaoling School of Artificial Intelligence
Renmin University of China
Beijing, China
wangwenda87@ruc.edu.cn
## Jinjia Feng
Gaoling School of Artificial Intelligenc... | [DESC]Document Type: Academic Preprint. Summary: This research paper, authored by members of the Gaoling School of Artificial Intelligence at Renmin University of China, critiques the reliance of current molecular Large Language Models (LLMs) on text-based data which fails to provide reliable structural grounding, ofte... | |
0academic-bio | academic-bio | arxiv_2607.03545v1 | [DESC]This document is a scientific preprint titled "Cellular Adaptation to Signal Fluctuations as Learning" authored by Tuan Minh Pham and David Saad, which proposes a theoretical framework to explain how cells achieve robust stability in gene expression despite environmental noise and fluctuating chemical signals kno... | [MARKDOWN]arXiv:2607.03545v1 [q-bio.MN] 3 Jul 2026
# Cellular Adaptation to Signal Fluctuations as Learning
Tuan Minh Pham$^{1,2,3,4,*}$ and David Saad$^5$
$^1$Dutch Institute for Emergent Phenomena, 1090 GE, Amsterdam, The Netherlands
$^2$Complexity Science Hub Vienna, Metternichgasse 8, A-1030, Vienna, Austria
$... | [DESC]This document is a scientific preprint titled "Cellular Adaptation to Signal Fluctuations as Learning" authored by Tuan Minh Pham and David Saad, which proposes a theoretical framework to explain how cells achieve robust stability in gene expression despite environmental noise and fluctuating chemical signals kno... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.03787v1 | [DESC]This academic preprint from Aureka AI Research introduces the Open Drug Discovery Engine (OPENDDE), an open-source, all-atom biomolecular foundation model designed to advance therapeutic discovery by moving beyond isolated structure prediction to a shared structural reasoning layer. The paper explains that OPENDD... | [MARKDOWN]a
aureka
AUREKA AI RESEARCH
# Folding, Reasoning, and Scaling
with Open-source Drug Discovery Engine
OpenDDE Project, Aureka AI Research *
## Abstract
Accurately modeling biomolecular interactions is a central bottleneck in biology and therapeutic discovery. Here, we introduce Open Drug Discovery Engine... | [DESC]This academic preprint from Aureka AI Research introduces the Open Drug Discovery Engine (OPENDDE), an open-source, all-atom biomolecular foundation model designed to advance therapeutic discovery by moving beyond isolated structure prediction to a shared structural reasoning layer. The paper explains that OPENDD... | |
0academic-bio | academic-bio | arxiv_2607.04204v1 | [DESC]This scientific paper, titled "A loser in both environments can survive by switching between them," authored by Riz Fernando Noronha and Kunihiko Kaneko from the Niels Bohr Institute at the University of Copenhagen, investigates how a species can persist despite being outcompeted (a "loser") in two distinct stati... | [MARKDOWN]# A loser in both environments can survive by switching between them
Riz Fernando Noronha $ ^{ID^{\dagger}} $, Kunihiko Kaneko $ ^{ID} $,
Niels Bohr Institute, University of Copenhagen, Copenhagen 2200, Denmark
† Corresponding author: noronha@nbi.ku.dk
## Abstract
How can a species persist in an enviro... | [DESC]This scientific paper, titled "A loser in both environments can survive by switching between them," authored by Riz Fernando Noronha and Kunihiko Kaneko from the Niels Bohr Institute at the University of Copenhagen, investigates how a species can persist despite being outcompeted (a "loser") in two distinct stati... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.04240v1 | [DESC]This document is a computer science preprint (arXiv:2607.04240v1) titled "Biological Motifs for Agentic Control," dated July 7, 2026, which proposes applying control motifs from systems biology to solve reliability and security issues in autonomous Large Language Model (LLM) agents. The author, Bogdan Banu, argue... | [MARKDOWN]arXiv:2607.04240v1 [cs.AI] 5 Jul 2026
# Biological Motifs for Agentic Control
A Typed Interface Correspondence between Gene Regulatory Networks and Agentic
Software Architectures
Preprint – Feedback Welcome
Bogdan Banu
bogdan@banu.be
July 7, 2026
## Abstract
The transition of Large Language Models (L... | [DESC]This document is a computer science preprint (arXiv:2607.04240v1) titled "Biological Motifs for Agentic Control," dated July 7, 2026, which proposes applying control motifs from systems biology to solve reliability and security issues in autonomous Large Language Model (LLM) agents. The author, Bogdan Banu, argue... | |
0academic-bio | academic-bio | arxiv_2607.04253v1 | [DESC]This document is a scientific research paper titled "Diffusion bridge with randomized initial and terminal times and its application to fish migration," authored by Hidekazu Yoshioka and Mohammed Louriki from the Japan Advanced Institute of Science and Technology and Cadi Ayyad University, respectively. The study... | [MARKDOWN]# Diffusion bridge with randomized initial and terminal times and its application to fish migration
Hidekazu Yoshioka¹,* and Mohammed Louriki²
¹ Graduate School of Advanced Science and Technology, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa, Japan
² Mathematics Departme... | [DESC]This document is a scientific research paper titled "Diffusion bridge with randomized initial and terminal times and its application to fish migration," authored by Hidekazu Yoshioka and Mohammed Louriki from the Japan Advanced Institute of Science and Technology and Cadi Ayyad University, respectively. The study... | |
0academic-bio | academic-bio | arxiv_2607.04456v1 | [DESC]This document is an academic preprint, specifically Chapter 3 of the monograph "Mathematical Models of Evolution and Replicator Systems Dynamics," authored by A.S. Bratus, S. Drozhzhin, and T. Yakushkina. The text presents a mathematical model for evolutionary adaptation in non-degenerate replicator systems, empl... | [MARKDOWN]arXiv:2607.04456v1 [q-bio.PE] 5 Jul 2026
# Mathematical Models of Evolution and Replicator Systems Dynamics
Chapter 3: Mathematical Model of Evolution of Non-Degenerate Replicator Systems
A. S. Bratus$^{1}$, S. Drozhzhin$^{1}$, T. Yakushkina$^{2}$
$^{1}$Moscow Center for Fundamental and Applied Mathematic... | [DESC]This document is an academic preprint, specifically Chapter 3 of the monograph "Mathematical Models of Evolution and Replicator Systems Dynamics," authored by A.S. Bratus, S. Drozhzhin, and T. Yakushkina. The text presents a mathematical model for evolutionary adaptation in non-degenerate replicator systems, empl... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.04527v1 | [DESC]This document is a scientific research paper titled "Causal ASCEND: Scalable Two-tier Causal Discovery on High Dimensional Multi-omics Data" that presents a novel framework for inferring causal mechanisms in biological systems. The authors highlight that while biological systems are hierarchically structured with... | [MARKDOWN]arXiv:2607.04527v1 [stat.ML] 5 Jul 2026
Bioinformatics, 2026, pp. 1–17
doi: DOI HERE
Advance Access Publication Date: Day Month Year
Paper
PAPER
# Causal ASCEND: Scalable Two-tier Causal Discovery on High Dimensional Multi-omics Data
Stephen Asiedu$^{1,*}$ and David Watson $^{1}$
$^{1}$Department of I... | [DESC]This document is a scientific research paper titled "Causal ASCEND: Scalable Two-tier Causal Discovery on High Dimensional Multi-omics Data" that presents a novel framework for inferring causal mechanisms in biological systems. The authors highlight that while biological systems are hierarchically structured with... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.04987v2 | [DESC]The document is a scientific research preprint titled "Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution" authored by Dmytro Rizdvanetskyi, Nathan Roos, and Pavlo Lutsik from the Department of Oncology at KU Leuven. The paper addresses the computational challenge of es... | [MARKDOWN]# Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution
Dmytro Rizdvanetskyi Nathan Roos Pavlo Lutsik
Department of Oncology
KU Leuven
Leuven, Belgium
{dmytro.rizdvanetskyi, nathanericjeanbaptiste.roos, pavlo.lutsik}@kuleuven.be
## Abstract
Cell-type deconvoluti... | [DESC]The document is a scientific research preprint titled "Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution" authored by Dmytro Rizdvanetskyi, Nathan Roos, and Pavlo Lutsik from the Department of Oncology at KU Leuven. The paper addresses the computational challenge of es... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.05153v1 | [DESC]The provided document is an academic preprint titled "Geometric Causal Models" by Eli N. Weinstein and David M. Blei that addresses the challenge of performing causal inference on structured, dependent data where the independent and identically distributed (i.i.d.) assumption fails. The authors introduce Geometri... | [MARKDOWN]arXiv:2607.05153v1 [stat.ML] 6 Jul 2026
# Geometric Causal Models
Eli N. Weinstein, \( ^{*} \) , David M. Blei \( ^{\dagger} \)
July 7, 2026
## Abstract
Scientists often seek to draw causal inferences from structured data that is not independently and identically distributed, such as spatial data, networ... | [DESC]The provided document is an academic preprint titled "Geometric Causal Models" by Eli N. Weinstein and David M. Blei that addresses the challenge of performing causal inference on structured, dependent data where the independent and identically distributed (i.i.d.) assumption fails. The authors introduce Geometri... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.05586v1 | [DESC]This document is an academic research preprint published on arXiv, titled "Three Centuries of the Laws of Cricket Reveal Core Principles of the Evolution of Regulatory Mechanisms," which analyzes the 268-year history of Cricket rules as a proxy for understanding long-term regulatory evolution. The authors, repres... | [MARKDOWN]arXiv:2607.05586v1 [physics.soc-ph] 6 Jul 2026
### Three Centuries of the Laws of Cricket Reveal Core Principles of the Evolution of Regulatory Mechanisms
Daniel Chia,¹ Hyejin Youn,²,³ Jonny Singer,⁴ Dawoon Jeong,⁵,⁶ Chris Kempes,² C. Brandon Ogbunugafor,²,⁷,⁸ Geoffrey B. West,²,⁹ and James Holehouse²,¹⁰ *
... | [DESC]This document is an academic research preprint published on arXiv, titled "Three Centuries of the Laws of Cricket Reveal Core Principles of the Evolution of Regulatory Mechanisms," which analyzes the 268-year history of Cricket rules as a proxy for understanding long-term regulatory evolution. The authors, repres... | |
1academic-crosstopic | academic-crosstopic | arxiv_2607.05691v1 | [DESC]This document is an arXiv preprint titled "Where to Cut, How Deep: BPE and Unigram-LM on Chemistry SMILES" by independent researcher Hunter Heidenreich. The paper addresses the lack of scrutiny regarding the inheritance of Byte-Pair Encoding (BPE) for tokenizing chemical SMILES strings, contrasting it with its na... | [MARKDOWN]arXiv:2607.05691v1 [cs.CL] 6 Jul 2026
# WHERE TO CUT, HOW DEEP: BPE AND UNIGRAM-LM ON CHEMISTRY SMILES
A PREPRINT
Hunter Heidenreich
Independent Researcher
hheiden0@gmail.com
orcid.org/0009-0001-0335-4803
# ABSTRACT
Every chemical language model reading SMILES begins with a tokenizer, yet the field ha... | [DESC]This document is an arXiv preprint titled "Where to Cut, How Deep: BPE and Unigram-LM on Chemistry SMILES" by independent researcher Hunter Heidenreich. The paper addresses the lack of scrutiny regarding the inheritance of Byte-Pair Encoding (BPE) for tokenizing chemical SMILES strings, contrasting it with its na... | |
2academic-math | academic-math | arxiv_2607.06477v1 | [DESC]This document is an academic research paper in the field of mathematics, specifically algebraic geometry and Arakelov theory. The paper, titled "A Generalised Cross-Ratio and Limits of Local Heights" by Hidde Lammert Bakker and Emre Can Sertöz, generalizes the classical concept of a cross-ratio from four points o... | [MARKDOWN]# A GENERALISED CROSS-RATIO AND LIMITS OF LOCAL HEIGHTS
HIDDE LAMMERT BAKKER AND EMRE CAN SERTÖZ
ABSTRACT. We generalise the standard cross-ratio of four points on a projective line to a cross-ratio of a configuration of four planes in projective $n$-space, the first pair $A_1$, $A_2$ being $k$-dimensional ... | [DESC]This document is an academic research paper in the field of mathematics, specifically algebraic geometry and Arakelov theory. The paper, titled "A Generalised Cross-Ratio and Limits of Local Heights" by Hidde Lammert Bakker and Emre Can Sertöz, generalizes the classical concept of a cross-ratio from four points o... | |
0academic-bio | academic-bio | arxiv_2607.06591v1 | [DESC]This document is a scientific research paper (specifically an arXiv preprint in the q-bio.PE category) titled "Polynomial encoding of rooted trees with branch lengths" authored by Pengyu Liu, Joan Carles Pons, and Gerard Ribas. The study addresses the fundamental challenge in evolutionary biology of accurately qu... | [MARKDOWN]arXiv:2607.06591v1 [q-bio.PE] 6 Jul 2026
# Polynomial encoding of rooted trees with branch lengths
Pengyu Liu$^{1,2*}$, Joan Carles Pons$^3$, Gerard Ribas$^4$
$^1$Department of Mathematics and Applied Mathematical Sciences and $^2$Department of Cell and Molecular Biology, University of Rhode Island, Kingst... | [DESC]This document is a scientific research paper (specifically an arXiv preprint in the q-bio.PE category) titled "Polynomial encoding of rooted trees with branch lengths" authored by Pengyu Liu, Joan Carles Pons, and Gerard Ribas. The study addresses the fundamental challenge in evolutionary biology of accurately qu... | |
0academic-bio | academic-bio | arxiv_2607.06732v1 | [DESC]This document is an academic preprint titled "Selection Mechanisms, Stationary Distributions, and Reversibility in Multiallelic Moran Models" authored by Dan Braha and Marcus A. M. de Aguiar, representing research from UMass Dartmouth, UNICAMP, and the New England Complex Systems Institute. The paper addresses a ... | [MARKDOWN]arXiv:2607.06732v1 [q-bio.PE] 7 Jul 2026
# Selection Mechanisms, Stationary Distributions, and Reversibility in Multiallelic Moran Models
Dan Braha$^{1,3}$ and Marcus A. M. de Aguiar$^{2,3}$
$^1$University of Massachusetts Dartmouth, Dartmouth, Massachusetts, United States of America
$^2$Gleb Wataghin Ins... | [DESC]This document is an academic preprint titled "Selection Mechanisms, Stationary Distributions, and Reversibility in Multiallelic Moran Models" authored by Dan Braha and Marcus A. M. de Aguiar, representing research from UMass Dartmouth, UNICAMP, and the New England Complex Systems Institute. The paper addresses a ... | |
2academic-math | academic-math | arxiv_2607.06773v1 | [DESC]This document is an academic research preprint from arXiv, titled "Normal numbers in sparse Cantor sets" by Verónica Becher and Simón Lew Deveali of the Universidad de Buenos Aires and CONICET. The paper investigates Cantor-type sets of Hausdorff dimension zero, consisting of numbers whose base-2 expansions conta... | [MARKDOWN]arXiv:2607.06773v1 [math.NT] 7 Jul 2026
# Normal numbers in sparse Cantor sets
Verónica Becher and Simón Lew Deveali
vbecher@dc.uba.ar sdeveali@dc.uba.ar
Facultad de Ciencias Exactas y Naturales,
Universidad de Buenos Aires & CONICET
Argentina
July 9, 2026
## Abstract
We consider Cantor-type sets of Hau... | [DESC]This document is an academic research preprint from arXiv, titled "Normal numbers in sparse Cantor sets" by Verónica Becher and Simón Lew Deveali of the Universidad de Buenos Aires and CONICET. The paper investigates Cantor-type sets of Hausdorff dimension zero, consisting of numbers whose base-2 expansions conta... | |
2academic-math | academic-math | arxiv_2607.06899v1 | [DESC]This document is a mathematical research paper titled "Covers of Bruhat–Tits Trees" by Corina-Gabriela Ciobotaru and Peter Vang Uttenthal. The authors investigate the geometry of central extensions $\tilde{G}$ of a locally compact group $G$ that split over a maximal compact subgroup $K$, deriving an explicit cocy... | [MARKDOWN]# COVERS OF BRUHAT-TITS TREES
CORINA-GABRIELA CIOBOTARU ☐ AND PETER VANG UTTENTHAL ☐
ABSTRACT. Let $G$ be a locally compact group and let $\widetilde{G}$ be a central extension of $G$ that splits over a maximal compact subgroup $K$ of $G$. We derive an explicit cocycle that lifts the natural action of $G$ o... | [DESC]This document is a mathematical research paper titled "Covers of Bruhat–Tits Trees" by Corina-Gabriela Ciobotaru and Peter Vang Uttenthal. The authors investigate the geometry of central extensions $\tilde{G}$ of a locally compact group $G$ that split over a maximal compact subgroup $K$, deriving an explicit cocy... | |
2academic-math | academic-math | arxiv_2607.06900v1 | [DESC]This mathematical research paper, titled "Schwarz maps for modular curves," addresses a classical problem posed by F. Klein and studied by A. Hurwitz regarding the construction of **linear ordinary differential equations** associated with **modular transformations** of fixed degree. The authors construct canonica... | [MARKDOWN]arXiv:2607.06900v1 [math.NT] 8 Jul 2026
# Schwarz maps for modular curves
Yaacov Kopeliovich$^{1}$ and Camilo Sanabria Malagón$^{*2}$
$^{1}$School of Business, University of Connecticut, Storrs, CT, USA
$^{2}$Departamento de Matemáticas, Universidad de los Andes, Bogotá, Colombia
## Abstract
We solve a ... | [DESC]This mathematical research paper, titled "Schwarz maps for modular curves," addresses a classical problem posed by F. Klein and studied by A. Hurwitz regarding the construction of **linear ordinary differential equations** associated with **modular transformations** of fixed degree. The authors construct canonica... | |
4academic-physics | academic-physics | arxiv_2607.06931v1 | [DESC]**Document Type:** Scientific Research Paper (Preprint)
**Summary:**
This document is a scientific research paper titled "Exoplanet Detection Using Adaptive Quantum-Optimal Measurement," authored by Hyunsoo Choi, Hyoung Won Baac, Zubin Jacob, and Haejun Chung. The paper addresses the significant challenge of det... | [MARKDOWN]# Exoplanet Detection Using Adaptive Quantum-Optimal Measurement
Hyunsoo Choi, $ ^{1} $ Young Won Baac, $ ^{2,*} $ Zubin Jacob, $ ^{3,\dagger} $ and Haejun Chung $ ^{1,4,5,\ddagger} $
$ ^{1} $Department of Electronic Engineering, Hanyang University, Seoul 04763, South Korea
$ ^{2} $Department of Electric... | [DESC]**Document Type:** Scientific Research Paper (Preprint)
**Summary:**
This document is a scientific research paper titled "Exoplanet Detection Using Adaptive Quantum-Optimal Measurement," authored by Hyunsoo Choi, Hyoung Won Baac, Zubin Jacob, and Haejun Chung. The paper addresses the significant challenge of det... | |
2academic-math | academic-math | arxiv_2607.06942v1 | [DESC]This document is a research paper in mathematical physics titled "Invariant Measures for Soliton Systems Generated by Mealy Automata," authored by Takahiro Kanazawa and Yutaro Nakabayashi, which investigates the time evolution and invariant properties of soliton systems defined by Mealy automata on bi-infinite co... | [MARKDOWN]# Invariant Measures for Soliton Systems Generated by Mealy Automata
Takahiro Kanazawa $ ^{1,2,3} $ and Yutaro Nakabayashi $ ^{4} $
$ ^{1} $Department of Physics, The University of Tokyo,
7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
$ ^{2} $ Nonequilibrium Physics of Living Matter Laboratory,
RIKEN Pi... | [DESC]This document is a research paper in mathematical physics titled "Invariant Measures for Soliton Systems Generated by Mealy Automata," authored by Takahiro Kanazawa and Yutaro Nakabayashi, which investigates the time evolution and invariant properties of soliton systems defined by Mealy automata on bi-infinite co... | |
2academic-math | academic-math | arxiv_2607.06944v1 | [DESC]This document is a mathematical research paper titled "$p$-adic Hahn Series with Sparse Support" authored by Shanwen Wang and Yijun Yuan. The authors introduce a novel sparseness condition applied to the supports of $p$-adic Hahn series and demonstrate that this condition implies transcendence over $\tilde{\mathb... | [MARKDOWN]# p-ADIC HAHN SERIES WITH SPARSE SUPPORT
by
Shanwen Wang\textsuperscript{ID} & Yijun Yuan\textsuperscript{ID}
Abstract. — Let $p$ be a prime number. We introduce a sparseness condition on the supports of $p$-adic Hahn series, and prove that this condition implies transcendence over $\tilde{\mathbf{Q}}_p$, ... | [DESC]This document is a mathematical research paper titled "$p$-adic Hahn Series with Sparse Support" authored by Shanwen Wang and Yijun Yuan. The authors introduce a novel sparseness condition applied to the supports of $p$-adic Hahn series and demonstrate that this condition implies transcendence over $\tilde{\mathb... | |
2academic-math | academic-math | arxiv_2607.06952v1 | [DESC]This document is a mathematical research paper titled "Universality for Cokernels of Partially Random Integral Matrices" by Isaac Rajagopal, presented as an arXiv preprint. The study focuses on the distribution of cokernels of random matrices over $\mathbb{Z}_p$ to address the Cohen-Lenstra heuristics, which pred... | [MARKDOWN]arXiv:2607.06952v1 [math.PR] 8 Jul 2026
# UNIVERSALITY FOR COKERNELS OF PARTIALLY RANDOM INTEGRAL MATRICES
ISAAC RAJAGOPAL
ABSTRACT. Given any $\varepsilon > 0$, let $M(n)$ be a random $n \times (n + u)$ matrix over $\mathbb{Z}_p$, with all entries independent and $\varepsilon$-balanced (lying in each resi... | [DESC]This document is a mathematical research paper titled "Universality for Cokernels of Partially Random Integral Matrices" by Isaac Rajagopal, presented as an arXiv preprint. The study focuses on the distribution of cokernels of random matrices over $\mathbb{Z}_p$ to address the Cohen-Lenstra heuristics, which pred... | |
4academic-physics | academic-physics | arxiv_2607.06961v1 | [DESC]This document is a scientific research article titled "Single-laser stimulated Brillouin scattering microscopy" authored by researchers from Zhejiang University and associated Chinese institutions, which addresses the limitations of traditional frequency-domain Stimulated Brillouin Scattering (SBS) microscopy reg... | [MARKDOWN]# Single-laser stimulated Brillouin scattering microscopy
FEIHONG LIN, $ ^{1,2} $ ZECHAO WEN, $ ^{3} $ JIAHUI LI, $ ^{1,2} $ XIAOYU YANG, $ ^{1,2} $ HAONAN ZHANG, $ ^{1} $ JIAHE ZHANG, $ ^{2} $ PEIQING ZHANG, $ ^{3} $ XU LIU, $ ^{1,2*} $ AND QING YANG $ ^{1,2,4*} $
$ ^{1} $State Key Laboratory of Extreme P... | [DESC]This document is a scientific research article titled "Single-laser stimulated Brillouin scattering microscopy" authored by researchers from Zhejiang University and associated Chinese institutions, which addresses the limitations of traditional frequency-domain Stimulated Brillouin Scattering (SBS) microscopy reg... | |
2academic-math | academic-math | arxiv_2607.06998v1 | [DESC]This academic research paper titled "Mordell Curves with Ordinate in Arithmetic Progression" by Sakha A. Alkabouss, Benjamin Earp-Lynch, Simon Earp-Lynch, and Omar Kihel analyzes Mordell elliptic curves defined by the Weierstrass form $y^2 = x^3 + k$, focusing on the existence of rational or integral points in ar... | [MARKDOWN]# MORDELL CURVES WITH ORDINATES IN ARITHMETIC PROGRESSION
SAKHA A. ALKABOUSS, BENJAMIN EARP-LYNCH, SIMON EARP-LYNCH, AND OMAR KIHEL
ABSTRACT. We show that Mordell curves with arithmetic progressions in the $ y $-coordinate of length 7 have not been ruled out by previous work, and we give non-isomorphic fam... | [DESC]This academic research paper titled "Mordell Curves with Ordinate in Arithmetic Progression" by Sakha A. Alkabouss, Benjamin Earp-Lynch, Simon Earp-Lynch, and Omar Kihel analyzes Mordell elliptic curves defined by the Weierstrass form $y^2 = x^3 + k$, focusing on the existence of rational or integral points in ar... | |
4academic-physics | academic-physics | arxiv_2607.07005v1 | [DESC]This scientific research article explores the efficient generation of high-amplitude terahertz (THz) radiation through the interaction of single-color long-wavelength infrared (LWIR) laser pulses with gaseous plasma targets, utilizing Particle-In-Cell (PIC) simulations to analyze the underlying physical mechanism... | [MARKDOWN]# Terahertz Generation through Photon Deceleration of Long-Wavelength Infrared Laser Pulses in Plasma
Srimanta Maity $ ^{1,*} $
$ ^{1} $Atomic, Molecular and Optical Physics Division, Physical Research Laboratory, Navrangpura, Ahmedabad 380009, India
Efficient terahertz (THz) generation with high field am... | [DESC]This scientific research article explores the efficient generation of high-amplitude terahertz (THz) radiation through the interaction of single-color long-wavelength infrared (LWIR) laser pulses with gaseous plasma targets, utilizing Particle-In-Cell (PIC) simulations to analyze the underlying physical mechanism... | |
2academic-math | academic-math | arxiv_2607.07014v1 | [DESC]This document is a mathematical research preprint, identifiable by the arXiv identifier in the left margin, focusing on the intersection of probability theory and deep learning geometry. The paper, titled "Local Large Deviations for Linear-Region Growth in Random Piecewise-Linear Networks," investigates the geome... | [MARKDOWN]# LOCAL LARGE DEVIATIONS FOR LINEAR-REGION GROWTH IN RANDOM PIECEWISE-LINEAR NETWORKS
RECEP ÖZKAN AND CHRISTIAN HIRSCH
ABSTRACT. We study a random compositional model for the growth of affine regions in deep piecewise-linear networks. The model is generated by i.i.d. perturbations of the symmetric height-on... | [DESC]This document is a mathematical research preprint, identifiable by the arXiv identifier in the left margin, focusing on the intersection of probability theory and deep learning geometry. The paper, titled "Local Large Deviations for Linear-Region Growth in Random Piecewise-Linear Networks," investigates the geome... | |
2academic-math | academic-math | arxiv_2607.07022v1 | [DESC]This document is a mathematical research preprint titled "Coordinate-Wise Elephant Random Walk" by Denisse Alejandra Escobar Parra, which introduces a novel variation of the classic Elephant Random Walk (ERW) defined on a k-dimensional discrete hypercube where, at each time step, a single coordinate is selected r... | [MARKDOWN]# COORDINATE-WISE ELEPHANT RANDOM WALK
DENISSE ALEJANDRA ESCOBAR PARRA
ABSTRACT. We introduce a coordinate-wise version of the elephant random walk on the k-dimensional discrete hypercube $ Q_k = \{-1, 1\}^k $. At each global time step, one coordinate is selected uniformly at random and updated according t... | [DESC]This document is a mathematical research preprint titled "Coordinate-Wise Elephant Random Walk" by Denisse Alejandra Escobar Parra, which introduces a novel variation of the classic Elephant Random Walk (ERW) defined on a k-dimensional discrete hypercube where, at each time step, a single coordinate is selected r... | |
2academic-math | academic-math | arxiv_2607.07042v1 | [DESC]This document is a mathematics research paper, specifically a preprint from arXiv, titled "Global Geometrization of Local Smooth Integral Models in the Hitchin Fibration for GL_n: The Bass Case" by Sungmun Cho and Jungtaek Hong. The authors build upon previous joint work regarding local orbital integrals for GL_n... | [MARKDOWN]# GLOBAL GEOMETRIZATION OF LOCAL SMOOTH INTEGRAL MODELS IN THE HITCHIN FIBRATION FOR $ GL_{n} $: THE BASS CASE
SUNGMUN CHO AND JUNGTAEK HONG
ABSTRACT. In previous joint work, we proposed a new method to study local orbital integrals for $ \mathrm{GL}_n $ (where $ n = 3 $ or in the Bass case), by employin... | [DESC]This document is a mathematics research paper, specifically a preprint from arXiv, titled "Global Geometrization of Local Smooth Integral Models in the Hitchin Fibration for GL_n: The Bass Case" by Sungmun Cho and Jungtaek Hong. The authors build upon previous joint work regarding local orbital integrals for GL_n... | |
2academic-math | academic-math | arxiv_2607.07053v1 | [DESC]This mathematical research paper, authored by Claire Voisin, investigates the structural properties of the Chow ring for very general abelian varieties and Jacobians. The primary results establish that for a very general abelian variety of dimension greater than or equal to four, any divisor $D$ whose square vani... | [MARKDOWN]# On the Chow ring of very general abelian varieties and a question of Pirola
Claire Voisin $ ^{*} $
## Abstract
We prove that for a very general abelian variety of dimension $\geq 4$, a divisor $D \in \mathrm{CH}^1(A)$ that satisfies $D^2 = 0$ in $\mathrm{CH}^2(A)$ is of torsion. The same result is also e... | [DESC]This mathematical research paper, authored by Claire Voisin, investigates the structural properties of the Chow ring for very general abelian varieties and Jacobians. The primary results establish that for a very general abelian variety of dimension greater than or equal to four, any divisor $D$ whose square vani... | |
2academic-math | academic-math | arxiv_2607.07054v1 | [DESC]This document is a mathematical research paper titled "Quantitative Hyperbolicity for Complex Manifolds via Numerical Invariants" authored by Tien-Cuong Dinh, Duc-Bao Nguyen, and Duc-Viet Vu. The paper introduces numerical invariants called hyperbolic indices designed to measure the hyperbolicity of compact Kähle... | [MARKDOWN]# QUANTITATIVE HYPERBOLICITY FOR COMPLEX MANIFOLDS VIA NUMERICAL INVARIANTS
TIEN-CUONG DINH, DUC-BAO NGUYEN, DUC-VIET VU
ABSTRACT. We introduce numerical invariants called hyperbolic indices, which measure the hyperbolicity of compact Kähler manifolds using directed positive closed currents. We prove that i... | [DESC]This document is a mathematical research paper titled "Quantitative Hyperbolicity for Complex Manifolds via Numerical Invariants" authored by Tien-Cuong Dinh, Duc-Bao Nguyen, and Duc-Viet Vu. The paper introduces numerical invariants called hyperbolic indices designed to measure the hyperbolicity of compact Kähle... | |
2academic-math | academic-math | arxiv_2607.07063v1 | [DESC]The document is a mathematical research paper titled "Ideal Class Monoids of Cubic Orders" by Sungmun Cho, Jungtaek Hong, and Yuchan Lee, which examines the ideal class monoid $\overline{\mathrm{Cl}}(R)$ for an order $R$ in a number field. The authors establish a local-global product formula that identifies the o... | [MARKDOWN]arXiv:2607.07063v1 [math.NT] 8 Jul 2026
# IDEAL CLASS MONOIDS OF CUBIC ORDERS
SUNGMUN CHO, JUNGTAEK HONG, AND YUCHAN LEE
ABSTRACT. Let \( R \) be an order in a number field, let \( \overline{\mathrm{Cl}}(R) \) be its ideal class monoid, and let \( \mathrm{Cl}(R) \) act on it by multiplication. The local-gl... | [DESC]The document is a mathematical research paper titled "Ideal Class Monoids of Cubic Orders" by Sungmun Cho, Jungtaek Hong, and Yuchan Lee, which examines the ideal class monoid $\overline{\mathrm{Cl}}(R)$ for an order $R$ in a number field. The authors establish a local-global product formula that identifies the o... | |
2academic-math | academic-math | arxiv_2607.07079v1 | [DESC]This document is an academic research paper focusing on number theory and combinatorics. The paper provides analytic proofs for Andrews-Bachraoui identities associated with a specific two-color partition function $F(n)$ of a non-negative integer $n$, where odd parts can appear in either red or blue, and even part... | [MARKDOWN]# Analytic proofs of Andrews-Bachraoui identities related to two-color partitions with evens in one color
Gaurab Bardhan $ ^{1} $ and Nipen Saikia $ ^{2,*} $
$ ^{1} $Department of Mathematics, Tyagbir Hem Baruah College,
Jamugurihat, Sonitpur, Assam, India.
E. Mail: gaurabbardhan561@gmail.com
$ ^{2} $D... | [DESC]This document is an academic research paper focusing on number theory and combinatorics. The paper provides analytic proofs for Andrews-Bachraoui identities associated with a specific two-color partition function $F(n)$ of a non-negative integer $n$, where odd parts can appear in either red or blue, and even part... | |
2academic-math | academic-math | arxiv_2607.07137v1 | [DESC]This document is a mathematical research paper titled "Descendability and Descent in Topological Weaves" by Adeel A. Khan, presented as an arXiv preprint with the identifier 2607.07137v1 and date 2026-06-29. The author proves a criterion for a finitely presented surjection of algebraic spaces to be descendable in... | [MARKDOWN]# DESCENDABILITY AND DESCENT IN TOPOLOGICAL WEAVES
ADEEL A. KHAN
ABSTRACT. We prove a criterion for a finitely presented surjection of algebraic spaces to be descendable in a topological weave. We apply this to show that rational motivic sheaves satisfy v-descent, and the same for étale motivic spectra on n... | [DESC]This document is a mathematical research paper titled "Descendability and Descent in Topological Weaves" by Adeel A. Khan, presented as an arXiv preprint with the identifier 2607.07137v1 and date 2026-06-29. The author proves a criterion for a finitely presented surjection of algebraic spaces to be descendable in... | |
2academic-math | academic-math | arxiv_2607.07145v1 | [DESC]This document is an academic preprint (specifically an arXiv paper) titled "A proof of Andrews-El Bachraoui's conjecture on the parity of coefficients of a q-series." The paper addresses a problem in number theory concerning integer partitions, specifically focusing on the function $s_1(n)$, which counts two-colo... | [MARKDOWN]# A proof of Andrews-El Bachraoui's conjecture on the parity of coefficients of a q-series
Eric H. Liu $ ^{1} $ and Ernest X.W. Xia $ ^{2} $
$ ^{1} $School of Statistics and Information,
Shanghai University of International Business and Economics,
Shanghai, 201620, P. R. China
$ ^{2} $School of Mathema... | [DESC]This document is an academic preprint (specifically an arXiv paper) titled "A proof of Andrews-El Bachraoui's conjecture on the parity of coefficients of a q-series." The paper addresses a problem in number theory concerning integer partitions, specifically focusing on the function $s_1(n)$, which counts two-colo... | |
2academic-math | academic-math | arxiv_2607.07180v1 | [DESC]This document is the opening page of an academic paper titled "Schanuel Integration and Euler Characteristic of Semi-algebraic Sets" by Yuxuan Xiao. The author extends the Schanuel integration framework, originally introduced for finite unions of convex sets, to the broader category of arbitrary semi-algebraic se... | [MARKDOWN]# Schanuel Integration and Euler Characteristic of Semi-algebraic Sets
Yuxuan Xiao $ ^{*} $
## Abstract
We extend the Schanuel integration framework, originally introduced for finite unions of convex sets, to arbitrary semi-algebraic sets. We prove that the resulting Schanuel integral of indicator function... | [DESC]This document is the opening page of an academic paper titled "Schanuel Integration and Euler Characteristic of Semi-algebraic Sets" by Yuxuan Xiao. The author extends the Schanuel integration framework, originally introduced for finite unions of convex sets, to the broader category of arbitrary semi-algebraic se... | |
4academic-physics | academic-physics | arxiv_2607.07205v1 | [DESC]This document is an astrophysics research paper titled "From 2D to 3D: Recovering Turbulent Density Dispersions from Noisy Data," which investigates how turbulence in the interstellar medium influences star formation and molecular cloud structure. The authors address the challenge of accurately measuring three-di... | [MARKDOWN]# From 2D to 3D: Recovering Turbulent Density Dispersions from Noisy Data
LUZ L. JIMENEZ VELA $ \textcircled{i} $ $ ^{1} $, CHRISTOPH FEDERRATH $ \textcircled{i} $ $ ^{2} $, DAVID C. COLLINS $ \textcircled{i} $ $ ^{1} $, AND SETH DAVIDOVITS
$ ^{1} $Florida State University, Physics, Tallahassee FL 32309... | [DESC]This document is an astrophysics research paper titled "From 2D to 3D: Recovering Turbulent Density Dispersions from Noisy Data," which investigates how turbulence in the interstellar medium influences star formation and molecular cloud structure. The authors address the challenge of accurately measuring three-di... | |
4academic-physics | academic-physics | arxiv_2607.07224v1 | [DESC]This document is a scientific research paper, specifically an arXiv preprint in the field of physics and optics, titled "Scalar-Wave Dispersion in Vectorial Photonic Crystals via Site-Adapted p Orbitals." The authors address the fundamental challenge that electromagnetic waves are vectorial fields described by Ma... | [MARKDOWN]# Scalar-Wave Dispersion in Vectorial Photonic Crystals via Site-Adapted $ p $ Orbitals
Yan-Long Chen, $ ^{1} $ Kin Hung Fung, $ ^{2} $ C. T. Chan, $ ^{2,*} $ and Qinghua Guo $ ^{1,\dagger} $
$ ^{1} $School of Physics and Electronics, Hunan University, Changsha, China
$ ^{2} $Department of Physics and S... | [DESC]This document is a scientific research paper, specifically an arXiv preprint in the field of physics and optics, titled "Scalar-Wave Dispersion in Vectorial Photonic Crystals via Site-Adapted p Orbitals." The authors address the fundamental challenge that electromagnetic waves are vectorial fields described by Ma... |
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