File size: 2,338 Bytes
5032722 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Fri Nov 8 11:05:01 2024
"""
import os
import json
import argparse
from collections.abc import MutableMapping
import numpy as np
import pickle
def flatten_convert(dictionary,
parent_key=None,
separator = '/'):
items = []
for key, value in dictionary.items():
new_key = parent_key + separator + key if parent_key else key
if isinstance(value, MutableMapping):
items.extend(flatten_convert(value, new_key, separator=separator).items())
else:
items.append((new_key, value)) #write value, not np.array(value)
return dict(items)
def write_config(args, out_dir):
with open(f'{out_dir}/TRAINING_ARGPARSE.pkl', 'wb') as g:
pickle.dump(args, g)
args = vars(args)
runname = args['training_wkdir']
ignore_keys = ['interms_for_tboard',
'save_arrs',
'histogram_output_freq',
'anc_enc_config',
'desc_dec_config',
'pred_config',
'optimizer_config',
'tboard_dir',
'model_ckpts_dir',
'logfile_dir',
'logfile_name',
'out_arrs_dir']
### write general table
keys_to_keep = [key for key in list( args.keys() ) if key not in ignore_keys]
with open(f'{out_dir}/CONFIG-TABLE.tsv','w') as g:
for key in keys_to_keep:
g.write(f'{key}\t')
g.write(f'{args[key]}\n')
### write individual tables
def write_indv_table(key, prefix):
sub_dict = args.get(key, None)
if sub_dict is not None:
sub_dict = flatten_convert(sub_dict)
with open(f'{out_dir}/{prefix}.tsv','w') as g:
g.write('training_wkdir' + '\t' + runname + '\n')
for key, val in sub_dict.items():
g.write(f'{key}\t')
g.write(f'{val}\n')
write_indv_table('optimizer_config', 'OPTIM-CONFIG')
write_indv_table('anc_enc_config', 'ANC-ENC-CONFIG')
write_indv_table('desc_dec_config', 'DESC-DEC-CONFIG')
write_indv_table('pred_config', 'PRED-CONFIG')
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