#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Fri Nov 8 11:05:01 2024 """ import os import json import argparse from collections.abc import MutableMapping import numpy as np import pickle def flatten_convert(dictionary, parent_key=None, separator = '/'): items = [] for key, value in dictionary.items(): new_key = parent_key + separator + key if parent_key else key if isinstance(value, MutableMapping): items.extend(flatten_convert(value, new_key, separator=separator).items()) else: items.append((new_key, value)) #write value, not np.array(value) return dict(items) def write_config(args, out_dir): with open(f'{out_dir}/TRAINING_ARGPARSE.pkl', 'wb') as g: pickle.dump(args, g) args = vars(args) runname = args['training_wkdir'] ignore_keys = ['interms_for_tboard', 'save_arrs', 'histogram_output_freq', 'anc_enc_config', 'desc_dec_config', 'pred_config', 'optimizer_config', 'tboard_dir', 'model_ckpts_dir', 'logfile_dir', 'logfile_name', 'out_arrs_dir'] ### write general table keys_to_keep = [key for key in list( args.keys() ) if key not in ignore_keys] with open(f'{out_dir}/CONFIG-TABLE.tsv','w') as g: for key in keys_to_keep: g.write(f'{key}\t') g.write(f'{args[key]}\n') ### write individual tables def write_indv_table(key, prefix): sub_dict = args.get(key, None) if sub_dict is not None: sub_dict = flatten_convert(sub_dict) with open(f'{out_dir}/{prefix}.tsv','w') as g: g.write('training_wkdir' + '\t' + runname + '\n') for key, val in sub_dict.items(): g.write(f'{key}\t') g.write(f'{val}\n') write_indv_table('optimizer_config', 'OPTIM-CONFIG') write_indv_table('anc_enc_config', 'ANC-ENC-CONFIG') write_indv_table('desc_dec_config', 'DESC-DEC-CONFIG') write_indv_table('pred_config', 'PRED-CONFIG')