Datasets:
Download code/fsbench/hashing.py from le-dang1haha/FundusShift: direct link, hf CLI and curl.
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- Download file 3.21 kB
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https://huggingface.co/datasets/le-dang1haha/FundusShift/resolve/main/code/fsbench/hashing.py
- Command line
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hf download hf://datasets/le-dang1haha/FundusShift/code/fsbench/hashing.py
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curl -L -o hashing.py https://huggingface.co/datasets/le-dang1haha/FundusShift/resolve/main/code/fsbench/hashing.py
3.21 kB
| """Exact (SHA-256) and perceptual (DCT pHash on the cropped fundus disc) image fingerprints.""" | |
| import hashlib | |
| import numpy as np | |
| from PIL import Image | |
| _N = 32 | |
| _DCT = np.cos(np.pi * (2 * np.arange(_N)[None, :] + 1) * np.arange(_N)[:, None] / (2 * _N)) | |
| def sha256_file(path, chunk=1 << 20): | |
| h = hashlib.sha256() | |
| with open(path, "rb") as f: | |
| while b := f.read(chunk): | |
| h.update(b) | |
| return h.hexdigest() | |
| def crop_fundus(img, thresh=15): | |
| """Crop to the bounding box of the illuminated fundus so black borders / padding don't dominate the hash.""" | |
| a = np.asarray(img.convert("RGB")).max(axis=2) | |
| ys, xs = np.nonzero(a > thresh) | |
| if len(xs) < 100: | |
| return img | |
| return img.crop((xs.min(), ys.min(), xs.max() + 1, ys.max() + 1)) | |
| def phash(img): | |
| g = crop_fundus(img).convert("L").resize((_N, _N), Image.BILINEAR) | |
| d = _DCT @ np.asarray(g, dtype=np.float64) @ _DCT.T | |
| low = d[:8, :8].flatten()[1:] # drop DC term | |
| bits = np.concatenate([[False], low > np.median(low)]) | |
| return int("".join("1" if b else "0" for b in bits), 2) | |
| def dhash(img): | |
| g = np.asarray(crop_fundus(img).convert("L").resize((9, 8), Image.BILINEAR), dtype=np.int16) | |
| bits = (g[:, 1:] > g[:, :-1]).flatten() | |
| return int("".join("1" if b else "0" for b in bits), 2) | |
| def fingerprint(path): | |
| """Return dict with sha256, phash/dhash (hex), width, height, or an error string.""" | |
| try: | |
| sha = sha256_file(path) | |
| with Image.open(path) as im: | |
| im.load() | |
| w, h = im.size | |
| ph, dh = phash(im), dhash(im) | |
| return {"sha256": sha, "phash": f"{ph:016x}", "dhash": f"{dh:016x}", "width": w, "height": h, "read_error": ""} | |
| except Exception as e: # corrupt / unreadable file is recorded, not fatal | |
| return {"sha256": "", "phash": "", "dhash": "", "width": 0, "height": 0, "read_error": repr(e)[:200]} | |
| def near_duplicate_pairs(hashes, max_dist=6, max_bucket=5000): | |
| """All index pairs with Hamming(phash) <= max_dist (max_dist <= 7). | |
| Pigeonhole: split 64 bits into 8 bytes; two hashes within distance 7 share at least one byte exactly, | |
| so candidates come from equal-byte buckets. Huge buckets (e.g. blank images) are skipped and reported. | |
| """ | |
| assert max_dist <= 7 | |
| h = np.array([int(x, 16) for x in hashes], dtype=np.uint64) | |
| pairs, skipped = set(), 0 | |
| for band in range(8): | |
| key = (h >> np.uint64(8 * band)) & np.uint64(0xFF) | |
| order = np.argsort(key, kind="stable") | |
| ks = key[order] | |
| bounds = np.flatnonzero(np.diff(ks)) + 1 | |
| for grp in np.split(order, bounds): | |
| if len(grp) < 2: | |
| continue | |
| if len(grp) > max_bucket: | |
| skipped += 1 | |
| continue | |
| x = h[grp] | |
| for s in range(0, len(grp), 512): # row chunks keep memory bounded | |
| dist = np.bitwise_count(x[s:s + 512, None] ^ x[None, :]) | |
| ii, jj = np.nonzero(dist <= max_dist) | |
| for i, j in zip(grp[s + ii], grp[jj]): | |
| if i != j: | |
| pairs.add((int(min(i, j)), int(max(i, j)))) | |
| return sorted(pairs), skipped | |