#!/usr/bin/env bash # Download every redistributable source into // (archives only; extraction is separate). # Usage: scripts/download_open.sh set -uo pipefail DL=${1:?download dir} get() { # id url filename mkdir -p "$DL/$1" curl -sSL --retry 5 --retry-delay 10 -C - -o "$DL/$1/$3" "$2" && echo "done $1/$3" || echo "FAILED $1/$3" } if [ "${V11:-0}" != "1" ]; then get idrid "https://zenodo.org/api/records/17219542/files/B.%20Disease%20Grading.zip/content" grading.zip & get rfmid2 "https://zenodo.org/api/records/7505822/files/RFMiD2_0.zip/content" RFMiD2_0.zip & get paraguay_dr "https://zenodo.org/api/records/4891308/files/Dataset%20from%20fundus%20images%20for%20the%20study%20of%20diabetic%20retinopathy_V03.zip/content" paraguay.zip & get fives "https://ndownloader.figshare.com/files/34969398" fives.rar & get papila "https://ndownloader.figshare.com/files/35013982" PAPILA.zip & get sustech_sysu "https://ndownloader.figshare.com/files/25320596" sustech.zip & get jichi "https://ndownloader.figshare.com/files/8169134" dmr.tar & get grape "https://ndownloader.figshare.com/files/41358156" CFPs.rar & get hrf "https://www5.cs.fau.de/fileadmin/research/datasets/fundus-images/all.zip" all.zip & get kim_glaucoma "https://dataverse.harvard.edu/api/access/datafile/3314942" processed_data.zip & get hygd "https://physionet.org/content/hillel-yaffe-glaucoma-dataset/get-zip/1.1.0/" hygd.zip & get deepdrid "https://github.com/deepdrdoc/DeepDRiD/archive/refs/heads/master.zip" deepdrid.zip & get bangladesh_eye "https://data.mendeley.com/public-files/datasets/s9bfhswzjb/files/13267974-54bf-42b0-87cb-f691b48ba384/file_downloaded" original.zip & wait get chaksu "https://ndownloader.figshare.com/files/38944805" readme.pdf get chaksu "https://ndownloader.figshare.com/files/37875687" Test.zip & get chaksu "https://ndownloader.figshare.com/files/37875672" Train.zip & wait echo ALL_DONE fi # ---- v1.1 additions ---- if [ "${V11:-0}" = "1" ]; then get acrima "https://ndownloader.figshare.com/files/14137700" Database.zip & get palm "https://ndownloader.figshare.com/files/37786152" PALM.zip & get rajbari_eye "https://data.mendeley.com/public-files/datasets/z227d626vm/files/9c96f4d4-6041-47e5-9d13-a230dbe9847f/file_downloaded" retinal.zip & get afio_composite "https://data.mendeley.com/public-files/datasets/trghs22fpg/files/a5961cce-bc62-4a21-afe8-575261aa0c08/file_downloaded" dataset.zip & get afio_hr "https://data.mendeley.com/public-files/datasets/3csr652p9y/files/5c07e45a-5f3f-407b-8bdb-16332a84fa23/file_downloaded" av.zip & wait echo V11_DONE fi # DDR (CC BY-NC-SA 4.0): Google Drive folder 1z6tSFmxW_aNayUqVxx6h6bY4kwGzUTEC, 10 chunks; download with gdown, # then: cat DDR-dataset.zip.0* > DDR-dataset.zip