function global_assessmentMethod (filepath,indice_excerpts,duration_event) %function global_assessmentMethod compute the global results of the assessmentMethod applied to a set of excerpts %filepath= pathway of the files of the database %indice_excerpts= vector with the index of the considered excerpts %duration_event= the average duration (in second) of the microevent detected (for the approximation of the True Negative number #TN) % %examples: % % filepath='C:\DEVUYST\DataBaseSpindles\'; % indice_excerpts=[1:6];%excerpts for the test % duration_event=1; % global_assessmentMethod (filepath,indice_excerpts,duration_event) % % or % % filepath='C:\DEVUYST\DataBaseKcomplexes\'; % indice_excerpts=[1:5];%excerpts for the test % duration_event=1; % global_assessmentMethod (filepath,indice_excerpts,duration_event) % % or % % filepath='C:\DEVUYST\DataBaseREMs\'; % indice_excerpts=[1:9]; % duration_event=1; % global_assessmentMethod (filepath,indice_excerpts,duration_event) % % or % % filepath='C:\DEVUYST\DataBasePLMs\'; % indice_excerpts=[6:10]; % duration_event=3; % global_assessmentMethod (filepath,indice_excerpts,duration_event) % nbr_types=struct('nbrtot_scored_by_system',zeros(1,7),'nbrtot_scored_by_visual1',zeros(1,7),'nbrtot_scored_by_visual2',zeros(1,7),'nbr_scored_only_by_sys__type2',zeros(1,7),'nbr_scored_only_by_vis1__type3A',zeros(1,7),'nbr_scored_only_by_vis2__type3B',zeros(1,7),'nbr_scored_only_by_systEvis1__type1A',zeros(1,7),'nbr_scored_only_by_systEvis2__type1B',zeros(1,7),'nbr_scored_only_by_vis1Evis2__type3C',zeros(1,7),'nbr_scored_by_vis1Evis2Esyst__type1C',zeros(1,7),'type3D',zeros(1,7),'type5A',zeros(1,7),'type5B',zeros(1,7),'type5C',zeros(1,7),'nbr_aut_multiple',zeros(1,7),'nbr_vis1_multiple',zeros(1,7),'nbr_vis2_multiple',zeros(1,7)); confusion_matrix_aut_Vis1=zeros(2,2); confusion_matrix_aut_Vis2=zeros(2,2); confusion_matrix_Vis1_Vis2=zeros(2,2); confusion_matrix_Vis2_Vis1=zeros(2,2); confusion_matrix_aut_Vis1uVis2=zeros(2,2); confusion_matrix_aut_Vis1nVis2=zeros(2,2); for num_excerpt=indice_excerpts nbr_types_temp=[]; confusion_matrix_aut_Vis1_temp=[]; confusion_matrix_aut_Vis2_temp=[]; confusion_matrix_Vis1_Vis2_temp=[]; confusion_matrix_Vis2_Vis1_temp=[]; confusion_matrix_aut_Vis1uVis2_temp=[]; confusion_matrix_aut_Vis1nVis2_temp=[]; filename_edf=[filepath,'excerpt',num2str(num_excerpt),'.edf']; filename_Automatic_detection=[filepath,'Automatic_detection_excerpt',num2str(num_excerpt),'.txt']; filename_Visual_scoring1=[filepath,'Visual_scoring1_excerpt',num2str(num_excerpt),'.txt']; filename_Visual_scoring2=[filepath,'Visual_scoring2_excerpt',num2str(num_excerpt),'.txt']; if exist(filename_Visual_scoring2,'file')==0 filename_Visual_scoring2=''; end filename_Hypnogram=[filepath,'Hypnogram_excerpt',num2str(num_excerpt),'.txt']; if exist(filename_Hypnogram,'file')==0 filename_Hypnogram=''; end [nbr_types_temp,confusion_matrix_aut_Vis1_temp,confusion_matrix_aut_Vis2_temp,confusion_matrix_Vis1_Vis2_temp,confusion_matrix_Vis2_Vis1_temp,confusion_matrix_aut_Vis1uVis2_temp,confusion_matrix_aut_Vis1nVis2_temp]=assessmentMethod(filename_edf,filename_Automatic_detection,filename_Visual_scoring1,filename_Visual_scoring2,filename_Hypnogram,duration_event); nbr_types=setfield(nbr_types, 'nbrtot_scored_by_system',getfield(nbr_types, 'nbrtot_scored_by_system')+getfield(nbr_types_temp, 'nbrtot_scored_by_system')); nbr_types=setfield(nbr_types, 'nbrtot_scored_by_visual1',getfield(nbr_types, 'nbrtot_scored_by_visual1')+getfield(nbr_types_temp, 'nbrtot_scored_by_visual1')); nbr_types=setfield(nbr_types, 'nbrtot_scored_by_visual2',getfield(nbr_types, 'nbrtot_scored_by_visual2')+getfield(nbr_types_temp, 'nbrtot_scored_by_visual2')); nbr_types=setfield(nbr_types, 'nbr_scored_only_by_sys__type2',getfield(nbr_types, 'nbr_scored_only_by_sys__type2')+getfield(nbr_types_temp, 'nbr_scored_only_by_sys__type2')); nbr_types=setfield(nbr_types, 'nbr_scored_only_by_vis1__type3A',getfield(nbr_types, 'nbr_scored_only_by_vis1__type3A')+getfield(nbr_types_temp, 'nbr_scored_only_by_vis1__type3A')); nbr_types=setfield(nbr_types, 'nbr_scored_only_by_vis2__type3B',getfield(nbr_types, 'nbr_scored_only_by_vis2__type3B')+getfield(nbr_types_temp, 'nbr_scored_only_by_vis2__type3B')); nbr_types=setfield(nbr_types, 'nbr_scored_only_by_systEvis1__type1A',getfield(nbr_types, 'nbr_scored_only_by_systEvis1__type1A')+getfield(nbr_types_temp, 'nbr_scored_only_by_systEvis1__type1A')); nbr_types=setfield(nbr_types, 'nbr_scored_only_by_systEvis2__type1B',getfield(nbr_types, 'nbr_scored_only_by_systEvis2__type1B')+getfield(nbr_types_temp, 'nbr_scored_only_by_systEvis2__type1B')); nbr_types=setfield(nbr_types, 'nbr_scored_only_by_vis1Evis2__type3C',getfield(nbr_types, 'nbr_scored_only_by_vis1Evis2__type3C')+getfield(nbr_types_temp, 'nbr_scored_only_by_vis1Evis2__type3C')); nbr_types=setfield(nbr_types, 'nbr_scored_by_vis1Evis2Esyst__type1C',getfield(nbr_types, 'nbr_scored_by_vis1Evis2Esyst__type1C')+getfield(nbr_types_temp, 'nbr_scored_by_vis1Evis2Esyst__type1C')); nbr_types=setfield(nbr_types, 'type3D',getfield(nbr_types, 'type3D')+getfield(nbr_types_temp, 'type3D')); nbr_types=setfield(nbr_types, 'type5A',getfield(nbr_types, 'type5A')+getfield(nbr_types_temp, 'type5A')); nbr_types=setfield(nbr_types, 'type5B',getfield(nbr_types, 'type5B')+getfield(nbr_types_temp, 'type5B')); nbr_types=setfield(nbr_types, 'type5C',getfield(nbr_types, 'type5C')+getfield(nbr_types_temp, 'type5C')); nbr_types=setfield(nbr_types, 'nbr_aut_multiple',getfield(nbr_types, 'nbr_aut_multiple')+getfield(nbr_types_temp, 'nbr_aut_multiple')); nbr_types=setfield(nbr_types, 'nbr_vis1_multiple',getfield(nbr_types, 'nbr_vis1_multiple')+getfield(nbr_types_temp, 'nbr_vis1_multiple')); nbr_types=setfield(nbr_types, 'nbr_vis2_multiple',getfield(nbr_types, 'nbr_vis2_multiple')+getfield(nbr_types_temp, 'nbr_vis2_multiple')); confusion_matrix_aut_Vis1=confusion_matrix_aut_Vis1+confusion_matrix_aut_Vis1_temp; confusion_matrix_aut_Vis2=confusion_matrix_aut_Vis2+confusion_matrix_aut_Vis2_temp; confusion_matrix_Vis1_Vis2=confusion_matrix_Vis1_Vis2+confusion_matrix_Vis1_Vis2_temp; confusion_matrix_Vis2_Vis1=confusion_matrix_Vis2_Vis1+confusion_matrix_Vis2_Vis1_temp; confusion_matrix_aut_Vis1uVis2=confusion_matrix_aut_Vis1uVis2+confusion_matrix_aut_Vis1uVis2_temp; confusion_matrix_aut_Vis1nVis2=confusion_matrix_aut_Vis1nVis2+confusion_matrix_aut_Vis1nVis2_temp; end nbr_types confusion_matrix_aut_Vis1 confusion_matrix_aut_Vis2 confusion_matrix_Vis1_Vis2 confusion_matrix_Vis2_Vis1 confusion_matrix_aut_Vis1uVis2 confusion_matrix_aut_Vis1nVis2