% hist2d() - compute histogram information for points in 2-dimensional space % % Inputs: % data - [matrix with ndim columns]. Each row is one observation. % Each columns contains the data for one dimension. % % nbins - [vector of length ndim]. Setsthe number of histogram bins % used for the corresponding dimension (data column) in 'data'. % For example [200 100], if the data of the first dimension % should be split into 200 bins and the data of the 2nd % dimensions into 100 bins. % % Outputs: % pointCount - counts per bin % dimCenters - [cell with ndim entries] bin centers for the corresponding % dimension % % Author: ur % Copyright (C) 2009-2017 Olaf Dimigen & Ulrich Reinacher, HU Berlin % olaf.dimigen@hu-berlin.de % This program is free software; you can redistribute it and/or modify % it under the terms of the GNU General Public License as published by % the Free Software Foundation; either version 3 of the License, or % (at your option) any later version. % % This program is distributed in the hope that it will be useful, % but WITHOUT ANY WARRANTY; without even the implied warranty of % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the % GNU General Public License for more details. % % You should have received a copy of the GNU General Public License % along with this program; if not, write to the Free Software % Foundation, 51 Franklin Street, Boston, MA 02110-1301, USA function [pointCount, dimCenters] = hist2d(data,nbins) % friendly feedback if any(isinf(data)) disp('%s(): Cannot deal with inf yet',mfilename) return end % remove rows containing NaN indexOfNaN = find( sum(isnan(data),2) ); data(indexOfNaN,:) = []; if indexOfNaN fprintf('\n%s(): Warning: The following rows contained NaN and were removed:\n%s\n',mfilename,num2str(indexOfNaN')) end [nrPoints,nrDims] = size(data); if ~exist('nbins','var') nbins = repmat(10,1,nrDims); elseif length(nbins) == 1 nbins = repmat(nbins,1,nrDims); end binCoords = cell(1,nrDims); dimCenters = cell(1,nrDims); dimEdges = cell(1,nrDims); %% greater or equal for loop = 1:nrDims dimEdges{loop} = linspace(min(data(:,loop)), max(data(:,loop)), nbins(loop)+1); dimCenters{loop} = mean([dimEdges{loop}(1:end-1);dimEdges{loop}(2:end)]); dimEdges{loop}(end) = []; binCoords{loop} = sum( repmat( data(:,loop),1, nbins(loop)) >= repmat(dimEdges{loop},nrPoints,1) ,2); if any(~ismember(binCoords{loop},1:nbins(loop))) error(sprintf('%s:BinAllocationWrong',mfilename),'Something went wrong during processing of dimension %d',loop) end end %% linBinCoords = sub2ind(nbins,binCoords{1},binCoords{2}); pointCount = hist(linBinCoords,1:prod(nbins)); pointCount = reshape(pointCount,nbins); %pointCount = rot90(pointCount);