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  1. interpro_active_site/advanced/idx2term.json +1 -0
  2. interpro_active_site/basic/idx2term.json +1 -0
  3. interpro_active_site/consensus.joblib +3 -0
  4. interpro_active_site/df_merge.tsv +1 -0
  5. interpro_active_site/metrics.json +7 -0
  6. interpro_active_site/paths.json +1 -0
  7. interpro_active_site/result.tsv +6 -0
  8. interpro_active_site/selections.json +1 -0
  9. interpro_binding_site/advanced/idx2term.json +1 -0
  10. interpro_binding_site/basic/idx2term.json +1 -0
  11. interpro_binding_site/basic/plot_0.png +3 -0
  12. interpro_binding_site/consensus.joblib +3 -0
  13. interpro_binding_site/df_merge.tsv +1 -0
  14. interpro_binding_site/metrics.json +7 -0
  15. interpro_binding_site/paths.json +1 -0
  16. interpro_binding_site/result.tsv +4 -0
  17. interpro_binding_site/selections.json +1 -0
  18. interpro_conserved_site/advanced/idx2term.json +1 -0
  19. interpro_conserved_site/advanced/plot_0.png +3 -0
  20. interpro_conserved_site/basic/idx2term.json +1 -0
  21. interpro_conserved_site/basic/plot_0.png +3 -0
  22. interpro_conserved_site/basic/plot_1.png +3 -0
  23. interpro_conserved_site/basic/plot_2.png +3 -0
  24. interpro_conserved_site/basic/plot_3.png +3 -0
  25. interpro_conserved_site/consensus.joblib +3 -0
  26. interpro_conserved_site/df_merge.tsv +3 -0
  27. interpro_conserved_site/metrics.json +7 -0
  28. interpro_conserved_site/paths.json +1 -0
  29. interpro_conserved_site/result.tsv +37 -0
  30. interpro_conserved_site/selections.json +1 -0
  31. interpro_domain/advanced/idx2term.json +1 -0
  32. interpro_domain/advanced/plot_0.png +3 -0
  33. interpro_domain/basic/idx2term.json +1 -0
  34. interpro_domain/basic/plot_0.png +3 -0
  35. interpro_domain/basic/plot_1.png +3 -0
  36. interpro_domain/basic/plot_10.png +3 -0
  37. interpro_domain/basic/plot_2.png +3 -0
  38. interpro_domain/basic/plot_3.png +3 -0
  39. interpro_domain/basic/plot_4.png +3 -0
  40. interpro_domain/basic/plot_5.png +3 -0
  41. interpro_domain/basic/plot_6.png +3 -0
  42. interpro_domain/basic/plot_7.png +3 -0
  43. interpro_domain/basic/plot_8.png +3 -0
  44. interpro_domain/basic/plot_9.png +3 -0
  45. interpro_domain/consensus.joblib +3 -0
  46. interpro_domain/df_merge.tsv +5 -0
  47. interpro_domain/metrics.json +7 -0
  48. interpro_domain/paths.json +1 -0
  49. interpro_domain/result.tsv +185 -0
  50. interpro_domain/selections.json +0 -0
interpro_active_site/advanced/idx2term.json ADDED
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+ {}
interpro_active_site/basic/idx2term.json ADDED
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+ {}
interpro_active_site/consensus.joblib ADDED
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+ size 68710
interpro_active_site/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
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+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_active_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
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+ {
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+ "type_of_task": "ranksum",
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+ "signature_size": 2887,
4
+ "annotations_size": 50,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.48
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+ }
interpro_active_site/paths.json ADDED
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+ {"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C142/C142_val_log2fc"}
interpro_active_site/result.tsv ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Thiolase, active site [IPR020610] 0.7079078177856 1.3773162352176536 0.1684144978879096 0.9999010660244444 0.4130191669095821 5 Q9BWD1 1
3
+ Histidine acid phosphatase active site [IPR033379] 0.8793760831888964 1.2689277384855742 0.2044668380418031 0.9999892126591712 0.4646973591859161 2 Q9NPH0 1
4
+ Serine carboxypeptidase, serine active site [IPR018202] 0.8856412925173566 1.205166452050699 0.2281390505201743 0.9999976179357678 0.4959544576525529 3 Q9HB40 1
5
+ Ribonucleotide reductase small subunit, acitve site [IPR030475] 0.7864818024263415 0.9065214336853272 0.3646599253936857 0.9999999998586446 0.6406424043348707 2 P31350 1
6
+ ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440] 0.2814558058925344 0.0263454044020797 0.9789818399895108 1.0 0.9789818399895108 2 P53597 1
interpro_active_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Cysteine peptidase, cysteine active site [IPR000169]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "DNA/RNA non-specific endonuclease, active site [IPR018524]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-CoA lyase, active site [IPR000138]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]", "Uracil-DNA glycosylase, active site [IPR018085]"], "available_proteins": ["ACAA1", "ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "AKT2", "ATP5A1", "ATP5B", "ATP6V1A", "ATP6V1B2", "BLMH", "BUB1", "CAMK2G", "CAPN1", "CDK1", "CDK12", "CDK4", "CDK5", "CDK6", "CDK9", "CHUK", "CKB", "CKMT1A*", "CLK3", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "ENDOG", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLUD1", "GSK3A", "GSR", "GUSB", "HADHB", "HMGCL", "HMGCS1", "LDHA", "LDHB", "LONP1", "MAP2K1", "MAP2K4", "MAPK1", "MAPKAPK2", "MDH1", "MDH2", "MTMR2", "NEK9", "NME1", "NME2", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKMYT1", "PKN1", "PKN2", "PLK1", "PREP", "PRKACA", "PRPF4B", "PTK7", "PTPMT1", "PTPN1", "PTPN11", "PTPN9", "RNASET2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "RRM2B", "SCP2", "SCPEP1", "SLK", "SND1", "SRPK1", "SUCLG1", "TALDO1", "TAOK1", "TIGAR", "TOP1", "TPI1", "TPP2", "TRIO", "TXNRD1", "UBA1", "UBA2", "UBA3", "UBE2K", "UBE2L3", "UBE2M", "UBE2S", "UMPS", "UNG", "VRK1"], "leading_proteins": ["ACAT2", "ACP6", "RRM2", "SCPEP1", "SUCLG1"]}
interpro_binding_site/advanced/idx2term.json ADDED
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+ {}
interpro_binding_site/basic/idx2term.json ADDED
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+ {"0": "EF-Hand 1, calcium-binding site [IPR018247]"}
interpro_binding_site/basic/plot_0.png ADDED

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interpro_binding_site/metrics.json ADDED
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+ "title": "Average number of proteins per term",
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interpro_binding_site/paths.json ADDED
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+ {"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C142/C142_val_log2fc"}
interpro_binding_site/result.tsv ADDED
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+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Peptidase M16, zinc-binding site [IPR001431] 0.6687618567908074 1.2143380279081877 0.2246186697695931 0.9996241837687152 0.4721430588395279 5 P22695 1
3
+ EF-Hand 1, calcium-binding site [IPR018247] 0.3764419788704339 0.9244138831975496 0.3552708691701636 0.9999987677577497 0.6478468790750043 35 O43707,O43852,O75746,Q9BRK5,Q9BPX6,Q96AY3,Q9NWM8,Q14257 8
4
+ 2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016] 0.3706657420249655 0.0244289966999224 0.9805104192017932 1.0 0.9805104192017932 3 P11182,P36957 2
interpro_binding_site/selections.json ADDED
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+ {"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]", "Ureohydrolase, manganese-binding site [IPR020855]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT2", "APEX1", "ARG2", "BPNT1", "BUB1", "CALU", "CAMK2G", "CAPN1", "CDK1", "CDK12", "CDK4", "CDK5", "CDK6", "CDK9", "CETN2", "CHUK", "CLK3", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DBT", "DCTD", "DLAT", "DLST", "EHD1", "EHD4", "EIF2AK2", "EPS15", "FKBP10", "FKBP14", "FKBP7", "FKBP9", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3A", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "IQGAP2", "LETM1", "MACF1", "MAP2K1", "MAP2K4", "MAPK1", "MAPK14", "MAPKAPK2", "MCCC1", "METAP2", "MICU1", "MYH10", "MYH9", "MYO1B", "MYO1C", "MYO1D", "MYO1E", "NFS1", "NRDC", "NUCB1", "NUCB2", "PA2G4", "PAK2", "PC", "PCCA", "PDCD6", "PEF1", "PGD", "PKMYT1", "PKN1", "PKN2", "PLCG1", "PLK1", "PLS1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1G", "PRKACA", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "STK26", "STK4", "TAOK1", "TBK1", "TKT", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "UQCRC2", "VRK1"], "leading_proteins": ["ACTN4", "CALU", "DBT", "DLST", "FKBP10", "FKBP14", "MICU1", "RCN2", "SDF4", "SLC25A12", "UQCRC2"]}
interpro_conserved_site/advanced/idx2term.json ADDED
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+ {"0": "Proteasome beta-type subunit, conserved site [IPR016050]", "1": "Intermediate filament protein, conserved site [IPR018039]", "2": "DnaJ domain, conserved site [IPR018253]", "3": "Thioredoxin, conserved site [IPR017937]"}
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+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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+ Proteasome beta-type subunit, conserved site [IPR016050] 5 8 2.285103114911883 0.0223067822107978 3.7135922330097086 7.970873786407767 1.4913184573846054 0.1902243906475925 1.515457478026574 0.1681602725795027 1.0170822776023185 0.2455850375425174 1.0 0.0470522829573702 0.0930016660897952 0.001485709034831 2.312503759377148e-06
3
+ Enoyl-CoA hydratase/isomerase, conserved site [IPR018376] 2 5 2.118766935828481 0.0341101683349105 1.924757281553398 5.281553398058253 -0.9288267959189742 0.3228532003876247 1.35877896690138 0.6373104245544198 1.097198226180622 0.3047587347081354 0.0088936095868224 0.000467906411108 0.0018987369599165 0.0004573905935078 0.0034775277607499
interpro_conserved_site/metrics.json ADDED
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+ {
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+ "type_of_task": "ranksum",
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+ "signature_size": 2887,
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+ "annotations_size": 269,
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+ "title": "Average number of proteins per term",
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+ "value": 2.5353159851301115
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+ }
interpro_conserved_site/paths.json ADDED
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+ {"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C142/C142_val_log2fc"}
interpro_conserved_site/result.tsv ADDED
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+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Proteasome beta-type subunit, conserved site [IPR016050] 0.809519376814762 2.285103114911883 0.0223067822107978 0.9976852714055816 0.1582023895993741 8 P28072,P49721,P28074,Q99436,P28070 5
3
+ Enoyl-CoA hydratase/isomerase, conserved site [IPR018376] 0.8905326729126152 2.118766935828481 0.0341101683349105 0.9999117889869628 0.1835127056418187 5 P40939,Q13011 2
4
+ Intermediate filament protein, conserved site [IPR018039] 0.7200959799221076 1.7346809093555975 0.0827973395461825 0.9999999999199858 0.3009795180800418 7 P20700,P07196,P02545,P08670,Q03252 5
5
+ Haem oxygenase conserved site [IPR018207] 0.95597920277296 1.57434499741772 0.1154077122519874 0.9999999999999952 0.375935151486355 2 P09601 1
6
+ Chromo domain, conserved site [IPR023779] 0.812748791289197 1.5613405848258757 0.1184434125634916 0.999999999999998 0.375935151486355 4 P83916,Q13185 2
7
+ Aldehyde dehydrogenase, cysteine active site [IPR016160] 0.6453280034576511 1.530250365170523 0.1259547690126985 0.9999999999999998 0.3764648096046211 8 O94788 1
8
+ Guanylate kinase, conserved site [IPR020590] 0.6842653199029017 1.4451151415257737 0.1484255466032709 1.0 0.4202786530134723 6 O14936,Q8N3R9,Q9NZW5 3
9
+ 3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180] 0.9351595006934812 1.383573332401354 0.1664891386007165 1.0 0.4478557828359276 3 P40939,Q16836 2
10
+ Thiolase, conserved site [IPR020613] 0.6628225644386515 1.3514969042242655 0.1765363109223729 1.0 0.4610511421176537 6 Q9BWD1 1
11
+ Syntaxin/epimorphin, conserved site [IPR006012] 0.7343859253766516 1.2534146184365096 0.210054854121215 1.0 0.5036590170115601 4 Q86Y82,Q9P2W9 2
12
+ DnaJ domain, conserved site [IPR018253] 0.5868396073293454 1.2507079926795164 0.2110410333326957 1.0 0.5036590170115601 8 P25685,P31689,Q8WXX5,Q96EY1,O60884,Q96KC8 6
13
+ 14-3-3 protein, conserved site [IPR023409] 0.5988664402009833 1.0713515655213346 0.2840113820896277 1.0 0.6040983009471654 6 Q04917,P62258,P63104 3
14
+ Cadherin conserved site [IPR020894] 0.8114384748700196 1.0021613944368712 0.3162656499030181 1.0 0.6540224368725317 2 Q14126 1
15
+ Mini-chromosome maintenance, conserved site [IPR018525] 0.568612692982781 0.9396230537404548 0.3474109467220643 1.0 0.6723276594837072 6 Q14566,P25205,P33993 3
16
+ Glycoside hydrolase, family 29, conserved site [IPR018526] 0.7857885615251092 0.9038905720715324 0.3660534288437906 1.0 0.6744409065683541 2 P04066 1
17
+ Profilin conserved site [IPR027310] 0.7185441941074351 0.6578284909693763 0.5106483446102057 1.0 0.763135581667474 2 P07737 1
18
+ Histidine triad, conserved site [IPR019808] 0.702946273830154 0.6040645850363271 0.54580070388493 1.0 0.8022972095357714 2 Q9BX68 1
19
+ Aldehyde dehydrogenase, glutamic acid active site [IPR029510] 0.4258225181950869 0.5039768302346695 0.6142776588935195 1.0 0.8423640634130718 8 O94788 1
20
+ EGF-like calcium-binding, conserved site [IPR018097] 0.6610051993067555 0.4679832023448719 0.6397966021119903 1.0 0.8478092904833763 2 P01130 1
21
+ Ribosomal S11, conserved site [IPR018102] 0.6398613518197568 0.4049391016110287 0.685522275435714 1.0 0.8508606494159167 2 P82912 1
22
+ Ubiquitin specific protease, conserved site [IPR018200] 0.3710391846566323 0.3529079229198475 0.7241574708982812 1.0 0.8759107524681158 9 Q96K76 1
23
+ Clathrin adaptor, mu subunit, conserved site [IPR018240] 0.6217059639389737 0.3502824196625333 0.726126757622267 1.0 0.8759107524681158 3 Q9Y2T2,Q9BXS5 2
24
+ D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753] 0.4636101282512982 0.2880056281160376 0.7733424305084284 1.0 0.9026771245065456 4 P56545 1
25
+ Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326] 0.5948006932408918 0.285630165429206 0.7751613968810855 1.0 0.9026771245065456 2 P29692 1
26
+ GTP1/OBG, conserved site [IPR006074] 0.5733102253032951 0.2368208508037114 0.8127957750234209 1.0 0.941119587366522 2 Q9Y295 1
27
+ Annexin repeat, conserved site [IPR018252] 0.3736093032542423 0.2032603315196989 0.8389315591529998 1.0 0.9603088911155614 6 P08133 1
28
+ Sterol reductase, conserved site [IPR018083] 0.5250703644839181 0.1513661259750602 0.8796869090985471 1.0 0.9850038753284276 3 O76062 1
29
+ Ribosomal protein S2, conserved site [IPR018130] 0.5188908145580633 0.1387266474213003 0.8896661601040687 1.0 0.9850038753284276 2 P08865 1
30
+ Phosphorylase pyridoxal-phosphate attachment site [IPR035090] 0.5136915077989648 0.131288744148116 0.89554689558758 1.0 0.9850038753284276 2 P06737 1
31
+ Heat shock protein Hsp90, conserved site [IPR019805] 0.4947988904299586 0.1091727224190092 0.9130654953232612 1.0 0.9903815251691824 3 P14625,P08238 2
32
+ Vinculin, conserved site [IPR000633] 0.4523396880415906 0.0670951733847453 0.9465059363195514 1.0 1.0 2 P35221 1
33
+ RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719] 0.4343154246100542 0.0555178715485274 0.9557258924705918 1.0 1.0 2 Q9Y2P8 1
34
+ Thioredoxin, conserved site [IPR017937] 0.2606882168925972 0.0541444244987507 0.9568200985034252 1.0 1.0 10 P07237,Q8NBS9,Q8IXB1,P30101,Q9H1E5,Q9H3N1,O95881,P13667,O43396 9
35
+ S100/Calbindin-D9k, conserved site [IPR001751] 0.389601386481797 0.0373837842295202 0.97017900194328 1.0 1.0 2 P60903 1
36
+ AT hook, DNA-binding motif [IPR017956] 0.3327556325823152 0.0283988013384707 0.97734408021035 1.0 1.0 2 Q6ZRS2 1
37
+ ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847] 0.2814558058925344 0.0263454044020797 0.9789818399895108 1.0 1.0 2 P53597 1
interpro_conserved_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AF4 interaction motif [IPR043639]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAMSAP, spectrin and Ca2+/calmodulin-binding region [IPR031372]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA methylase, N-6 adenine-specific, conserved site [IPR002052]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "Dihydroorotate dehydrogenase, conserved site [IPR001295]", "DnaJ domain, conserved site [IPR018253]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Ependymin, conserved site [IPR018224]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Fork head domain conserved site 2 [IPR030456]", "Fork head domain conserved site1 [IPR018122]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutathione peroxidase conserved site [IPR029760]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Golgin subfamily A member 2, C-terminal binding motif [IPR043937]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Helix-turn-helix motif [IPR000047]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "Homeobox, conserved site [IPR017970]", "Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site [IPR023076]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Low-density lipoprotein (LDL) receptor class A, conserved site [IPR023415]", "Lysophospholipase patatin, conserved site [IPR001423]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Methylthiotransferase, conserved site [IPR020612]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Molybdenum cofactor biosynthesis, conserved site [IPR008284]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RIO kinase, conserved site [IPR018935]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal RNA adenine methylase transferase, conserved site [IPR020596]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S14, conserved site [IPR018271]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Transcription factor TFIIB, conserved site [IPR023486]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "AAMP", "ABCB1", "ABCB7", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ACAA1", "ACAA2", "ACAD9", "ACADM", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACIN1", "ACLY", "ACSL1", "ACSL3", "ACSL4", "ACSL6", "ACTL6A", "ACTN1", "ACTN2", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFF4", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK4", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1A2", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH4A1", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA4", "ANXA6", "ANXA7", "AP1M1", "AP2M1", "AP2S1", "AP3M1", "APEX1", "APP", "ATAD1", "ATAD2", "ATP5C1", "ATP5O", "BAG6", "BAZ1A", "BAZ1B", "BCS1L", "BDH2", "BOP1", "BPNT1", "BRD2", "CAD", "CALR", "CAMSAP3", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CASK", "CBL", "CBR1", "CBX1", "CBX3", "CBX5", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDH2", "CDK5RAP1", "CDKAL1", "CDX2", "CETN2", "CHAF1B", "CHD1", "CHD1L", "CHD4", "CMPK1", "CNDP2", "COLEC12", "COPA", "CORO1C", "CPOX", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4A", "CUL4B", "CUL5", "CYP51A1", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX6", "DHCR7", "DHFR", "DHODH", "DHRS7", "DHRS7B", "DHX15", "DHX16", "DHX29", "DHX30", "DHX33", "DHX36", "DHX38", "DHX40", "DHX57", "DHX8", "DHX9", "DIDO1", "DIMT1", "DIS3", "DLG3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNMT1", "DRG1", "DRG2", "DSG2", "DTL", "DTYMK", "DYNLL1", "DYNLL2", "ECH1", "ECHS1", "ECI1", "ECI2", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EHHADH", "EIF3I", "EIF4A1", "EIF4A2", "EIF4A3", "EIF4E", "ENO1", "ENO3", "EPB41", "EPB41L2", "EPB41L5", "EPDR1", "EPN1", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FOXC1", "FUCA1", "FUCA2", "GAA", "GALK1", "GANAB", "GART", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPA", "GMPPB", "GNPDA1", "GNS", "GOLGA2", "GPHN", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF2B", "GTF3C2", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HGS", "HIBADH", "HINT2", "HLA-A", "HLA-B", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMGCR", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA1B", "HSPA2", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IDH1", "IDH2", "IDH3A", "IDH3B", "IDH3G", "ILVBL", "IMPDH2", "INA", "ING5", "IQGAP1", "IQGAP2", "IVD", "KDM2A", "KDM5A", "KDSR", "KIF11", "KIF18B", "KIF1A", "KIF20A", "KIF22", "KIF23", "KIF2C", "KIF3A", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LAMP2", "LARS", "LARS2", "LBR", "LDLR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LRWD1", "LSS", "MACF1", "MAPK1", "MAPK14", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME2", "MGST2", "MID1", "MIF", "MPI", "MPP1", "MPP2", "MPP5", "MPP6", "MPST", "MRPL3", "MRPS11", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFS8", "NDUFV1", "NEFL", "NEFM", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NSD2", "NSF", "NUBP2", "NUDT1", "NUDT12", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL11", "OSBPL6", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PGM3", "PHF3", "PHGDH", "PHIP", "PI4KA", "PIK3C2A", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLOD3", "PLRG1", "PLS1", "PLS3", "PNP", "PNPLA6", "POLD1", "POLR1B", "POLR2B", "POLR2C", "PPIB", "PPID", "PPIE", "PPIF", "PPIH", "PPIL1", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS1", "PRPS2", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RCL1", "RDH13", "RDX", "RIDA", "RIOK2", "RNF14", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS28", "RPS29", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RRP9", "RSF1", "RSL24D1", "RTCA", "RTN4IP1", "S100A10", "S100A11", "SART1", "SBDS", "SCD", "SCP2", "SDHB", "SEC61A1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC27A2", "SLC27A4", "SLIT2", "SMARCA4", "SMU1", "SNRNP40", "SNU13", "SORD", "SPATA5", "SPATA5L1", "SPTBN1", "SRCAP", "SRM", "STMN1", "STOM", "STX10", "STX12", "STX18", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SV2A", "SYNE2", "TAP1", "TBL3", "TCP1", "THOC6", "TK1", "TLN1", "TM7SF2", "TMX1", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM21", "TRIM24", "TRIM25", "TRIM28", "TRIP13", "TRMT11", "TSFM", "TSPAN3", "TSPAN6", "TTF2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UHRF1", "USP10", "USP13", "USP14", "USP34", "USP47", "USP48", "USP5", "USP7", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "WARS", "WARS2", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR41", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2", "ZMYND8"], "leading_proteins": ["ACAT2", "ALDH1A2", "ANXA6", "AP1M1", "AP3M1", "CASK", "CBX1", "CBX3", "CTBP2", "CTNNA1", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC9", "DRG1", "DSG2", "ECH1", "EEF1D", "FUCA1", "HADH", "HADHA", "HINT2", "HMOX1", "HSP90AB1", "HSP90B1", "LDLR", "LMNA", "LMNB1", "LMNB2", "MCM3", "MCM6", "MCM7", "MPP5", "MPP6", "MRPS11", "NEFL", "P4HB", "PDIA3", "PDIA4", "PFN1", "PSMB2", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PYGL", "RCL1", "RPSA", "S100A10", "SRCAP", "STX12", "STX18", "SUCLG1", "TM7SF2", "TMX1", "TMX4", "TXNDC12", "TXNDC5", "TXNL1", "USP47", "VIM", "YWHAE", "YWHAH", "YWHAZ"]}
interpro_domain/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "K Homology domain, type 1 [IPR004088]"}
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Git LFS Details

  • SHA256: 1fd936ebc241b4843b84f97002008ea50b2c2e05748ebf088ccf4979c27aa793
  • Pointer size: 131 Bytes
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interpro_domain/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "K Homology domain, type 1 [IPR004088]", "1": "K Homology domain [IPR004087]", "2": "PDZ domain [IPR001478]", "3": "Intermediate filament, rod domain [IPR039008]", "4": "Pleckstrin homology domain [IPR001849]", "5": "RNA recognition motif domain [IPR000504]", "6": "DnaJ domain [IPR001623]", "7": "EF-hand domain [IPR002048]", "8": "Myb domain [IPR017930]", "9": "WW domain [IPR001202]", "10": "SANT domain [IPR017884]"}
interpro_domain/basic/plot_0.png ADDED

Git LFS Details

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interpro_domain/basic/plot_1.png ADDED

Git LFS Details

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interpro_domain/basic/plot_10.png ADDED

Git LFS Details

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interpro_domain/basic/plot_2.png ADDED

Git LFS Details

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Git LFS Details

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interpro_domain/basic/plot_4.png ADDED

Git LFS Details

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interpro_domain/basic/plot_5.png ADDED

Git LFS Details

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interpro_domain/basic/plot_6.png ADDED

Git LFS Details

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  • Size of remote file: 127 kB
interpro_domain/basic/plot_7.png ADDED

Git LFS Details

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interpro_domain/basic/plot_8.png ADDED

Git LFS Details

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interpro_domain/basic/plot_9.png ADDED

Git LFS Details

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interpro_domain/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8279bbe0f9a1ec2948740d0c438cce11db6c5ee7c59a9a0ce9fa8d5d132468dc
3
+ size 307244
interpro_domain/df_merge.tsv ADDED
@@ -0,0 +1,5 @@
 
 
 
 
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
2
+ K Homology domain, type 1 [IPR004088] 11 22 2.317999376710533 0.0204493549326458 8.5 23.218446601941743 0.4539576731478794 0.576935027430011 4.690674491420825 1.6401661988255969 0.9187340965418598 0.3398774289684012 1.0 1.0 1.0 0.1988041978590851 0.0001777780576517
3
+ Cytochrome b5-like heme/steroid binding domain [IPR001199] 4 7 2.236765082665257 0.0253016977948992 2.813106796116505 6.104368932038835 1.6405397264547834 0.1100883340733615 1.2852875686886795 0.8042848477475721 1.100790504333474 0.1612592696854457 1.0 0.0014481500629001 0.0001833288791406 5.522373670119844e-06 0.000160552482799
4
+ Ubiquitin-like domain [IPR000626] 0 10 2.1498154786454724 0.0315698133321731 4.405339805825243 14.820388349514564 -0.0462692019740876 0.6086089683072633 2.7436193640206525 2.317466779992568 0.7856205542108695 0.2846932444846588 0.05227668272289 0.1835089509173778 0.3367676981326228 0.6437372861060551 0.8779339028138602
5
+ P-type ATPase, haloacid dehalogenase domain [IPR044492] 1 6 2.082728669070121 0.0372759626835015 2.941747572815534 6.145631067961165 0.9567723497044874 0.2732808833570771 1.8358630293390923 1.459204245106796 1.2102525517005158 0.2943240638910574 1.0 1.0 0.1933613304033528 0.0983610682747182 0.2914565107291916
interpro_domain/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 2887,
4
+ "annotations_size": 2444,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.122340425531915
7
+ }
interpro_domain/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C142/C142_val_log2fc"}
interpro_domain/result.tsv ADDED
@@ -0,0 +1,185 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ K Homology domain, type 1 [IPR004088] 0.5880670662764192 2.317999376710533 0.0204493549326458 1.0 0.1448644158127146 22 Q9Y6M1,Q8IWZ3,Q92945,Q9NQT5,Q96I24,Q9NZI8,Q96AE4,Q07666,P51114,Q13868,Q92667 11
3
+ Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.8352558893414929 2.236765082665257 0.0253016977948992 1.0 0.1548371304666602 7 O95864,Q9UMX5,Q8WUJ1,O15173 4
4
+ P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.8341043898442708 2.0827286690701214 0.0372759626835015 1.0 0.1768979665989858 6 Q9NQ11 1
5
+ K Homology domain [IPR004087] 0.5354350930075525 1.9548561956433643 0.050600046098586 1.0 0.2057679079283598 22 Q9Y6M1,Q8IWZ3,Q92945,Q96I24,Q9NZI8,Q96AE4,Q07666,P51114,Q92667 9
6
+ Major facilitator superfamily domain [IPR020846] 0.8376127689104765 1.9085327831363357 0.0563223901905467 1.0 0.2159572928874712 5 Q9H2V7,P53985,Q7L0J3,Q8NHS3 4
7
+ Aminopeptidase N-like , N-terminal domain [IPR045357] 0.8293749063024157 1.875421520094022 0.0607347568473384 1.0 0.2259295977700077 5 P09960,P55786,Q9UIQ6 3
8
+ Peptidase M1, membrane alanine aminopeptidase [IPR014782] 0.8293749063024157 1.875421520094022 0.0607347568473384 1.0 0.2259295977700077 5 P09960,P55786,Q9UIQ6 3
9
+ PDZ domain [IPR001478] 0.5366406468708907 1.7723836821179413 0.0763308886498983 1.0 0.2601850653561388 19 Q14168,Q9NZW5,Q9HD26,Q9Y4G8,Q9UDY2,O14936,Q8N3R9 7
10
+ Guanylate kinase/L-type calcium channel beta subunit [IPR008145] 0.6890621386701855 1.7364354475876074 0.0824868690751103 1.0 0.2746565504353812 8 Q9UDY2,O14936,Q8N3R9,Q9NZW5 4
11
+ Guanylate kinase-like domain [IPR008144] 0.6890621386701855 1.7364354475876074 0.0824868690751103 1.0 0.2746565504353812 8 Q9UDY2,O14936,Q8N3R9,Q9NZW5 4
12
+ Intermediate filament, rod domain [IPR039008] 0.7200959799221076 1.7346809093555975 0.0827973395461825 1.0 0.2749411655582474 7 P20700,P07196,P02545,P08670,Q03252 5
13
+ Cyclic nucleotide-binding domain [IPR000595] 0.7833629188318199 1.6887265807568177 0.0912718393225349 1.0 0.2883892826558904 5 Q9Y4G8,Q6P4Q7 2
14
+ RBM3/CIRBP, RNA recognition motif [IPR034278] 0.9712305025996526 1.6351709362324454 0.1020132190036484 1.0 0.3068855695693017 2 P98179 1
15
+ Pleckstrin homology domain [IPR001849] 0.4926209482203255 1.6204234945237546 0.105141336340927 1.0 0.3103447174121083 20 Q96JJ3,Q9BZF3,Q13464,Q01082,P19174,Q96P47,O75962,P31751,Q15057 9
16
+ Peptidase M16, N-terminal [IPR011765] 0.6896146935431049 1.5978148099326228 0.1100841976582747 1.0 0.3187746197592694 7 Q5JRX3,P22695 2
17
+ Peptidase M16, C-terminal [IPR007863] 0.6896146935431049 1.5978148099326228 0.1100841976582747 1.0 0.3187746197592694 7 Q5JRX3,P22695 2
18
+ Alcohol dehydrogenase-like, C-terminal [IPR013149] 0.6836767922145605 1.4425506894393634 0.1491470826399863 1.0 0.3841048155659922 6 Q8N4Q0 1
19
+ SET domain [IPR001214] 0.7214861599983086 1.433712156383684 0.1516544216829491 1.0 0.3887491596613579 5 Q03164,Q9H7B4,Q9NRG4 3
20
+ Far upstream element-binding protein, C-terminal [IPR015096] 0.9185441941074528 1.424914366167081 0.1541819563547024 1.0 0.3905840198602007 2 Q96AE4 1
21
+ Rpn11/EIF3F, C-terminal [IPR024969] 0.7748847516374635 1.4128521817475383 0.1576991915372949 1.0 0.3943708151613952 4 O00303 1
22
+ RNA recognition motif domain [IPR000504] 0.4163230488614419 1.4028905444082116 0.1606494809459624 1.0 0.3965932640726587 113 Q14103,P23588,P38159,Q92804,P52597,P35637,P31942,P31483,Q9Y6M1,P51991,P23246,P22626,P31943,O60506,Q9UN86,Q16629,Q15233,O14979,P98179,Q13151,Q07955,O75494,Q14011,Q99729,Q8WXF1,P55795,Q13247,Q96PK6,Q9BWF3,Q9UHX1,P07910,Q01130,O43390,P98175,P62995 35
23
+ 3-hydroxyacyl-CoA dehydrogenase, NAD binding [IPR006176] 0.9351595006934812 1.383573332401354 0.1664891386007165 1.0 0.4060131330888732 3 P40939,Q16836 2
24
+ 3-hydroxyacyl-CoA dehydrogenase, C-terminal [IPR006108] 0.9351595006934812 1.383573332401354 0.1664891386007165 1.0 0.4060131330888732 3 P40939,Q16836 2
25
+ Chromo/chromo shadow domain [IPR000953] 0.6370515362600517 1.3589170092555984 0.1741728883027147 1.0 0.418473067116264 7 Q8TAQ2,P83916,Q13185 3
26
+ Thiolase, C-terminal [IPR020617] 0.6628225644386515 1.3514969042242655 0.1765363109223729 1.0 0.4194262984352631 6 Q9BWD1 1
27
+ Thiolase, N-terminal [IPR020616] 0.6628225644386515 1.3514969042242655 0.1765363109223729 1.0 0.4194262984352631 6 Q9BWD1 1
28
+ L27 domain, C-terminal [IPR014775] 0.7565036420395501 1.3405220364957446 0.1800756849417721 1.0 0.4219027281173687 4 O14936,Q8N3R9,Q9NZW5 3
29
+ L27 domain [IPR004172] 0.7565036420395501 1.3405220364957446 0.1800756849417721 1.0 0.4219027281173687 4 O14936,Q8N3R9,Q9NZW5 3
30
+ Heterogeneous nuclear ribonucleoprotein Q acidic domain [IPR041337] 0.8949740034662054 1.3309492348076228 0.1832057153431496 1.0 0.4245761823972485 2 O43390 1
31
+ G-protein gamma-like domain [IPR015898] 0.8831889081455815 1.284072416250216 0.1991166184431927 1.0 0.4497606427681728 2 Q9UBI6 1
32
+ Zinc finger, CHHC-type [IPR012996] 0.9022191400832178 1.264787457533648 0.2059475287015644 1.0 0.4575779637696576 3 P55795,P31943 2
33
+ Zinc finger, RanBP2-type [IPR001876] 0.5621729268171781 1.2606742382152154 0.2074262392846635 1.0 0.4600821226775287 9 P52756,P98175,P35637,Q92804 4
34
+ MRH domain [IPR044865] 0.8989804242201379 1.2531279311899413 0.2101591525287252 1.0 0.4637555405208348 3 P11717 1
35
+ Lamin tail domain [IPR001322] 0.895631067961165 1.2410755851576083 0.2145778278179997 1.0 0.4654571023428964 3 Q03252,P20700 2
36
+ DnaJ domain [IPR001623] 0.535015794380875 1.2358613537795655 0.2165101043691524 1.0 0.4670578327939578 13 P25685,P31689,Q9NVH1,Q8WXX5,Q8IXB1,Q96EY1,O60884,Q96KC8,O75937 9
37
+ NOPS [IPR012975] 0.8932038834951456 1.2323453585434083 0.2178201028726281 1.0 0.4683854263051072 3 Q8WXF1,P23246 2
38
+ ERAP1-like C-terminal domain [IPR024571] 0.8900832177531208 1.2211257872115664 0.2220383974009641 1.0 0.4757971160106007 3 P55786,Q9UIQ6 2
39
+ Ricin B, lectin domain [IPR000772] 0.7256330211585267 1.2189523706957084 0.2228622706598957 1.0 0.4765313993812644 4 Q86SF2,Q10471,Q10472 3
40
+ Zinc finger, LIM-type [IPR001781] 0.6638248761866087 1.193776636976877 0.23256535293972 1.0 0.4878881738924255 5 Q14847,Q15942 2
41
+ OBG-type guanine nucleotide-binding (G) domain [IPR031167] 0.661430418509699 1.183806253164319 0.2364897663441549 1.0 0.4940008452522348 5 Q9NTK5 1
42
+ RNA recognition motif domain, eukaryote [IPR003954] 0.4964640169118945 1.0915942858794314 0.2750114688391551 1.0 0.531313693897846 15 P31483,Q9UHX1,P38159,Q14011 4
43
+ BRICHOS domain [IPR007084] 0.8322357019063958 1.0830215739733562 0.2787988472307194 1.0 0.5319663197234571 2 Q9NQX7 1
44
+ 14-3-3 domain [IPR023410] 0.5988664402009833 1.0713515655213346 0.2840113820896277 1.0 0.5367744943234799 6 Q04917,P62258,P63104 3
45
+ Zinc finger C2H2 AKAP95-type [IPR034736] 0.844255559663063 1.057300866591863 0.290374297899393 1.0 0.5396603464174482 3 Q9ULX6 1
46
+ Chromo shadow domain [IPR008251] 0.840846047156727 1.0452067768475783 0.2959274120111237 1.0 0.5471132943217049 3 P83916,Q13185 2
47
+ Chromo domain subgroup [IPR017984] 0.840846047156727 1.0452067768475783 0.2959274120111237 1.0 0.5471132943217049 3 P83916,Q13185 2
48
+ CARG-binding factor, N-terminal [IPR012956] 0.8225303292894306 1.0451738548383918 0.2959426248335899 1.0 0.5471132943217049 2 Q99729 1
49
+ Cold shock domain [IPR011129] 0.6267746543753228 1.0398492570199906 0.2984099404372009 1.0 0.5495666616507817 5 P16989,P67809,Q6ZN17 3
50
+ Cold-shock protein, DNA-binding [IPR002059] 0.6267746543753228 1.0398492570199906 0.2984099404372009 1.0 0.5495666616507817 5 P16989,P67809,Q6ZN17 3
51
+ Rab-GTPase-TBC domain [IPR000195] 0.6790678139440522 1.0362971152202751 0.3000635515731069 1.0 0.5507018732730585 4 Q4KMP7 1
52
+ Chaperone DnaJ, C-terminal [IPR002939] 0.6788067984738165 1.0352788583238086 0.3005387002661812 1.0 0.5507018732730585 4 P25685,O60884,Q96EY1 3
53
+ Dynamin, N-terminal [IPR045063] 0.565297420288718 1.0305031430860452 0.3027738775621089 1.0 0.5519474652016456 7 O60313,O95140,O00429,Q9H223 4
54
+ Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.565297420288718 1.0305031430860452 0.3027738775621089 1.0 0.5519474652016456 7 O60313,O95140,O00429,Q9H223 4
55
+ MHC class I alpha chain, alpha1 alpha2 domains [IPR001039] 0.8355054425412332 1.0262967263802116 0.3047517398788317 1.0 0.5529422808194987 3 P10321 1
56
+ MHC class I, alpha chain, C-terminal [IPR010579] 0.8355054425412332 1.0262967263802116 0.3047517398788317 1.0 0.5529422808194987 3 P10321 1
57
+ MHC class I-like antigen recognition-like [IPR011161] 0.8355054425412332 1.0262967263802116 0.3047517398788317 1.0 0.5529422808194987 3 P10321 1
58
+ Immunoglobulin C1-set [IPR003597] 0.8355054425412332 1.0262967263802116 0.3047517398788317 1.0 0.5529422808194987 3 P10321 1
59
+ Cadherin-like [IPR002126] 0.8114384748700196 1.0021613944368712 0.3162656499030181 1.0 0.5633770031800118 2 Q14126 1
60
+ Chromo domain [IPR023780] 0.6156037516810062 0.9936893709637248 0.3203741190105624 1.0 0.567965324180726 5 P83916,Q13185 2
61
+ SWIB/MDM2 domain [IPR003121] 0.8069324090121148 0.9847694474688924 0.3247373312315722 1.0 0.5737574195710954 2 P41214 1
62
+ EF-hand domain [IPR002048] 0.3774748660609485 0.9779318522266331 0.3281080301715362 1.0 0.5763585525044546 41 Q9UJS0,O43707,Q8IYU8,O43852,O75746,Q9BRK5,Q9BPX6,Q96AY3,Q9NWM8,Q14257 10
63
+ N-acetylgalactosaminyltransferase [IPR045885] 0.8186546463245493 0.9669352001057316 0.3335764285131046 1.0 0.5827453833352594 3 Q86SF2,Q10472 2
64
+ CBS domain [IPR000644] 0.5742943083982128 0.9642612632078906 0.3349149565559504 1.0 0.5838317787608721 6 P51797 1
65
+ Myosin tail [IPR002928] 0.8013864818024266 0.9634345507631014 0.3353294943611424 1.0 0.5841377649455681 2 P35580 1
66
+ MCM, AAA-lid domain [IPR041562] 0.568612692982781 0.9396230537404548 0.3474109467220643 1.0 0.5919393757862925 6 Q14566,P25205,P33993 3
67
+ MCM OB domain [IPR033762] 0.568612692982781 0.9396230537404548 0.3474109467220643 1.0 0.5919393757862925 6 Q14566,P25205,P33993 3
68
+ MCM N-terminal domain [IPR027925] 0.568612692982781 0.9396230537404548 0.3474109467220643 1.0 0.5919393757862925 6 Q14566,P25205,P33993 3
69
+ MCM domain [IPR001208] 0.568612692982781 0.9396230537404548 0.3474109467220643 1.0 0.5919393757862925 6 Q14566,P25205,P33993 3
70
+ Peptidase M41 [IPR000642] 0.7937608318890789 0.934235119435842 0.3501826236010381 1.0 0.5937549321128706 2 Q96TA2 1
71
+ OCRE domain [IPR041591] 0.7920277296360514 0.927622102300502 0.3536036285919901 1.0 0.596828223949464 2 P98175 1
72
+ Post-SET domain [IPR003616] 0.7902946273830043 0.9210180366227224 0.3570410103284445 1.0 0.5997307417475728 2 Q03164 1
73
+ Alpha-L-fucosidase, C-terminal [IPR031919] 0.7857885615251092 0.9038905720715324 0.3660534288437906 1.0 0.6036670580932688 2 P04066 1
74
+ Intermediate filament head, DNA-binding domain [IPR006821] 0.6442157853919335 0.9012935168845144 0.3674322798920277 1.0 0.6043381040694148 4 P07196,P08670 2
75
+ Extended PHD (ePHD) domain [IPR034732] 0.7850953206239035 0.9012612409650408 0.3674494364350043 1.0 0.6043381040694148 2 Q03164 1
76
+ Fibronectin type III [IPR003961] 0.6429225301689854 0.8963292400822237 0.3700769468160811 1.0 0.6058057990746833 4 Q92859 1
77
+ Syntaxin, N-terminal domain [IPR006011] 0.7795493934142108 0.880283037000176 0.3787059995968485 1.0 0.6113325383188227 2 Q86Y82 1
78
+ LIS1 homology motif [IPR006594] 0.5543789456371623 0.8781819276120678 0.3798449979196301 1.0 0.6121540289560958 6 O95684 1
79
+ Cold-shock (CSD) domain [IPR019844] 0.6171587137949042 0.7983421153966138 0.4246719843307898 1.0 0.6519461870002828 4 P16989,P67809 2
80
+ Adenylate kinase, active site lid domain [IPR007862] 0.7438474870017351 0.7480061923954333 0.4544564224361083 1.0 0.6776641222903286 2 P27144 1
81
+ MPN domain [IPR037518] 0.4338998393789007 0.7289841568776909 0.4660113537902641 1.0 0.6894259979802697 10 Q7L5N1,O00303 2
82
+ Legume-like lectin [IPR005052] 0.7355285961871558 0.7179888958067624 0.4727641335614838 1.0 0.6951815491351583 2 P49257 1
83
+ JAB1/MPN/MOV34 metalloenzyme domain [IPR000555] 0.4741764846604077 0.7171206834327465 0.4732996344501128 1.0 0.6951815491351583 8 Q7L5N1,O00303 2
84
+ Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain [IPR044862] 0.7389402476050186 0.6954933097591574 0.4867462024471456 1.0 0.7085215716383705 3 P13674 1
85
+ Class II aldolase/adducin N-terminal [IPR001303] 0.7164644714038026 0.650573695202881 0.5153217153307841 1.0 0.7352284134666879 2 Q9UEY8 1
86
+ Aldehyde dehydrogenase domain [IPR015590] 0.4166213335347584 0.6423268721242611 0.520660969945669 1.0 0.7383460283872665 10 O94788 1
87
+ Peptidase M28 [IPR007484] 0.7216551884677032 0.6395708730761009 0.5224516236301113 1.0 0.7397866559397405 3 Q7Z2K6 1
88
+ ERM family, FERM domain C-lobe [IPR041789] 0.7066789281015602 0.5922597835392258 0.553676641771828 1.0 0.7632181119516906 3 P15311 1
89
+ Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.5553243149497143 0.5734549423282536 0.5663366987054237 1.0 0.7718710227368665 4 P05023,P20020,P23634 3
90
+ Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.5553243149497143 0.5734549423282536 0.5663366987054237 1.0 0.7718710227368665 4 P05023,P20020,P23634 3
91
+ LEM-like domain [IPR013146] 0.6928942807625647 0.5702560353909609 0.5685040551133658 1.0 0.771902172609481 2 P42166 1
92
+ CTP synthase, N-terminal [IPR017456] 0.6925476603119551 0.5691027094832464 0.5692864397303383 1.0 0.7721065808551314 2 Q9NRF8 1
93
+ CTP synthase GATase domain [IPR033828] 0.6925476603119551 0.5691027094832464 0.5692864397303383 1.0 0.7721065808551314 2 Q9NRF8 1
94
+ LEM domain [IPR003887] 0.4796292359047676 0.5673096215336497 0.570503841241579 1.0 0.7725949195295172 6 Q8NC56,Q86XL3 2
95
+ Zinc finger, double-stranded RNA binding [IPR022755] 0.6890814558058928 0.5576167310938198 0.5771061290804713 1.0 0.7741069791858817 2 Q9UKJ3 1
96
+ Ion transporter-like, CBS domain [IPR044751] 0.67487001733101 0.5114604613057022 0.609028667643799 1.0 0.7908958893312672 2 Q6P4Q7 1
97
+ CNNM, transmembrane domain [IPR002550] 0.67487001733101 0.5114604613057022 0.609028667643799 1.0 0.7908958893312672 2 Q6P4Q7 1
98
+ Heat shock protein DnaJ, cysteine-rich domain [IPR001305] 0.6785714285714286 0.5067832054251848 0.6123069415610365 1.0 0.7922065458841573 3 O60884,Q96EY1 2
99
+ EGF-like domain [IPR000742] 0.6763812055709308 0.5003238929424009 0.6168470329727529 1.0 0.7947148911889341 3 Q9P273 1
100
+ U2A'/phosphoprotein 32 family A, C-terminal [IPR003603] 0.5299719537903418 0.4874175026883562 0.6259624925229961 1.0 0.8003455381832436 4 P39687,Q15435 2
101
+ Prolyl 4-hydroxylase alpha-subunit, N-terminal [IPR013547] 0.6641247833622003 0.4776248143686963 0.632917266070206 1.0 0.8009945448874181 2 P13674 1
102
+ EGF-like calcium-binding domain [IPR001881] 0.6610051993067555 0.4679832023448719 0.6397966021119903 1.0 0.804505442343296 2 P01130 1
103
+ Myb domain [IPR017930] 0.4494967025338532 0.4514817792547987 0.6516423543590977 1.0 0.8069060904255283 6 Q92922,Q99543,Q99459,Q8TAQ2,Q96KC8 5
104
+ Modifier of rudimentary, Modr [IPR009851] 0.6499133448873455 0.4343968703289526 0.6640002700389314 1.0 0.8165776902450776 2 A5D8V6 1
105
+ SUN coiled coil domain 2 [IPR040994] 0.6488734835355208 0.4313053728696756 0.6662463441780697 1.0 0.8169802034449098 2 O94901 1
106
+ SAB domain [IPR007477] 0.6457538994800541 0.4220913744476405 0.6729583235659684 1.0 0.8169802034449098 2 P11171 1
107
+ Band 4.1, C-terminal [IPR008379] 0.6457538994800541 0.4220913744476405 0.6729583235659684 1.0 0.8169802034449098 2 P11171 1
108
+ rRNA-processing arch domain [IPR025696] 0.6415944540727896 0.4099492596794785 0.6818431691700255 1.0 0.819284515954544 2 Q15477 1
109
+ ATP-dependent RNA helicase Ski2, C-terminal [IPR012961] 0.6415944540727896 0.4099492596794785 0.6818431691700255 1.0 0.819284515954544 2 Q15477 1
110
+ PABP, RNA recognition motif 2 [IPR045305] 0.6412478336221832 0.4089449019930137 0.6825800960355459 1.0 0.8193643196025905 2 P11940 1
111
+ Band 7 domain [IPR001107] 0.4009594923586155 0.4026333904895054 0.6872179420345479 1.0 0.822135791133053 8 P27105,O75955 2
112
+ AP complex, mu/sigma subunit [IPR022775] 0.5029541940219558 0.4011660490682379 0.688297875125258 1.0 0.822135791133053 4 Q9Y2T2,P53680 2
113
+ SAP domain [IPR003034] 0.3755835234728382 0.3945789032482233 0.693153685575872 1.0 0.822135791133053 14 P82979,O75925 2
114
+ Mu homology domain [IPR028565] 0.4998355748735507 0.3916236274186271 0.6953363274831479 1.0 0.8225566236054277 4 Q9Y2T2,Q9BXS5 2
115
+ EH domain-containing protein, N-terminal [IPR031692] 0.6346620450606584 0.3900849879622356 0.696473703164695 1.0 0.8227627569855068 2 Q9H223 1
116
+ Domain of unknown function DUF5600 [IPR040990] 0.6346620450606584 0.3900849879622356 0.696473703164695 1.0 0.8227627569855068 2 Q9H223 1
117
+ Heat shock protein Hsp90, N-terminal [IPR020575] 0.4949705168227603 0.3769221173886986 0.7062314843134407 1.0 0.8278320132671698 4 Q12931,P14625,P08238 3
118
+ Heat shock chaperonin-binding [IPR006636] 0.4939299340964342 0.373807411982662 0.7085476046609234 1.0 0.8278409757290067 4 Q9NRR5,P31948,Q9BSL1 3
119
+ Nucleotidyl transferase domain [IPR005835] 0.6262650722862404 0.3618901795148464 0.71743409888683 1.0 0.8306015845455962 3 Q9NR50 1
120
+ Longin domain [IPR010908] 0.6248266296809987 0.3582085504345074 0.7201872489187708 1.0 0.8306015845455962 3 O75396,O15498 2
121
+ v-SNARE, coiled-coil homology domain [IPR042855] 0.6248266296809987 0.3582085504345074 0.7201872489187708 1.0 0.8306015845455962 3 O75396,O15498 2
122
+ Cobalamin (vitamin B12)-binding domain [IPR006158] 0.6225303292894265 0.3564857478322487 0.7214768235640532 1.0 0.8309453998189626 2 P22033 1
123
+ B-box, C-terminal [IPR003649] 0.6231627311279939 0.3539719877423765 0.723359876419339 1.0 0.8319489590441714 3 O15344 1
124
+ Plasma membrane calcium transporting P-type ATPase, C-terminal [IPR022141] 0.6097053726169852 0.3226538483550798 0.7469574078278991 1.0 0.842827287502948 2 P20020 1
125
+ Immunoglobulin I-set [IPR013098] 0.4716831857827955 0.3098751613526146 0.7566558920803632 1.0 0.847913850556749 4 Q92859 1
126
+ Peptidase C19, ubiquitin carboxyl-terminal hydrolase [IPR001394] 0.343449166507338 0.3097486939530515 0.7567520701625181 1.0 0.847913850556749 10 Q96K76 1
127
+ Ubiquitin specific protease domain [IPR028889] 0.343449166507338 0.3097486939530515 0.7567520701625181 1.0 0.847913850556749 10 Q96K76 1
128
+ Dynamin, GTPase domain [IPR001401] 0.6042803239071837 0.3076088910213025 0.7583799540015879 1.0 0.847913850556749 3 O00429 1
129
+ Immunoglobulin-like domain [IPR007110] 0.352788944917813 0.2940450756766245 0.7687234596477595 1.0 0.8520454128703511 14 O75962,Q92859,P10321,P04439 4
130
+ Glycosyltransferase 2-like [IPR001173] 0.4249827564430498 0.2880292317681306 0.7733243626771948 1.0 0.855225746679909 5 Q86SF2,Q10472 2
131
+ D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain [IPR006140] 0.4636101282512982 0.2880056281160376 0.7733424305084284 1.0 0.855225746679909 4 P56545 1
132
+ D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [IPR006139] 0.4636101282512982 0.2880056281160376 0.7733424305084284 1.0 0.855225746679909 4 P56545 1
133
+ Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain [IPR014038] 0.5948006932408918 0.285630165429206 0.7751613968810855 1.0 0.8564622305503495 2 P29692 1
134
+ Elongation factor 1 beta central acidic region, eukaryote [IPR018940] 0.5948006932408918 0.285630165429206 0.7751613968810855 1.0 0.8564622305503495 2 P29692 1
135
+ Major sperm protein (MSP) domain [IPR000535] 0.5833622183708811 0.2589627770189577 0.7956639606524369 1.0 0.8731938571327148 2 O95292 1
136
+ BAT2, N-terminal [IPR009738] 0.5788561525129988 0.2488856851245614 0.80344920856697 1.0 0.8785815954083556 2 Q9Y520 1
137
+ GTP binding protein, second domain [IPR031662] 0.5733102253032951 0.2368208508037114 0.8127957750234209 1.0 0.8872143252153821 2 Q9Y295 1
138
+ CAP Gly-rich domain [IPR000938] 0.564298093587524 0.2180198346702885 0.8274136573013686 1.0 0.8999550415863573 2 Q14203 1
139
+ Proteasomal ATPase OB C-terminal domain [IPR032501] 0.3959056210964524 0.2089668874801557 0.834474087904796 1.0 0.906021621874421 5 P43686,P62191,P62333,P17980 4
140
+ DDE superfamily endonuclease domain [IPR004875] 0.5556325823223596 0.2008918749481115 0.8407831210560306 1.0 0.9106253407784508 2 Q7Z3K3 1
141
+ HTH CenpB-type DNA-binding domain [IPR006600] 0.5556325823223596 0.2008918749481115 0.8407831210560306 1.0 0.9106253407784508 2 Q7Z3K3 1
142
+ WW domain [IPR001202] 0.3287004864489284 0.2005240483597558 0.8410707520532084 1.0 0.9106253407784508 9 Q13576,Q8N1G2,O14776,O75400,P46939,Q13526,Q96J02,P46940 8
143
+ Tim44-like domain [IPR007379] 0.5414211438474894 0.1748382631874337 0.8612067217035355 1.0 0.9280375784142156 2 O43615 1
144
+ RecF/RecN/SMC, N-terminal [IPR003395] 0.3733518390006871 0.1560161618815678 0.8760202818809928 1.0 0.9382092764755242 5 Q14683,Q9NTJ3,Q9UQE7,Q96SB8 4
145
+ Domain of unknown function DUF4749 [IPR031847] 0.5261698440208012 0.1497004844114421 0.8810009259822895 1.0 0.9406580441680714 2 O00151 1
146
+ EH domain [IPR000261] 0.4006243496357933 0.1452056393480981 0.8845485135701623 1.0 0.9435804539440164 4 Q9H4M9,P42566,Q9H223 3
147
+ Serine-threonine/tyrosine-protein kinase, catalytic domain [IPR001245] 0.5201109570041611 0.1437829837664056 0.8856718402299111 1.0 0.9435804539440164 3 Q13308,P41240 2
148
+ MoaB/Mog domain [IPR001453] 0.5216637781629114 0.1428296998552154 0.8864246804610612 1.0 0.9435804539440164 2 Q8NFF5 1
149
+ Oxoglutarate/iron-dependent dioxygenase [IPR005123] 0.3493621128096448 0.1415328375576796 0.8874490205113255 1.0 0.9438317694210964 6 P13674 1
150
+ Prolyl 4-hydroxylase, alpha subunit [IPR006620] 0.3493621128096448 0.1415328375576796 0.8874490205113255 1.0 0.9438317694210964 6 P13674 1
151
+ GYF domain [IPR003169] 0.5150779896013906 0.1332397453075218 0.8940037788415813 1.0 0.948326925125358 2 Q6Y7W6 1
152
+ U-box domain [IPR003613] 0.3602169906889274 0.1287780476343381 0.8975332763237434 1.0 0.950009236611186 5 P19474 1
153
+ Ribosomal L28e/Mak16 [IPR029004] 0.5091854419410787 0.1251099072029484 0.9004365401116541 1.0 0.9526696554254904 2 Q9BXY0 1
154
+ Heterogeneous nuclear ribonucleoprotein U, SPRY domain [IPR035778] 0.5062413314840501 0.1239759086997406 0.9013343499557808 1.0 0.9531382116698436 3 Q1KMD3,Q00839 2
155
+ FCP1 homology domain [IPR004274] 0.4987868284228797 0.1117844803262681 0.9109942932960304 1.0 0.9600266881398528 2 Q05D32 1
156
+ Tudor domain [IPR002999] 0.334680849205294 0.1090319088413991 0.9131771816021824 1.0 0.9607425879620032 6 Q14739 1
157
+ B-box-type zinc finger [IPR000315] 0.3458184640925539 0.1020431179454868 0.91872245051759 1.0 0.9638114747340998 5 O15344,P19474 2
158
+ Myosin, N-terminal, SH3-like [IPR004009] 0.4883384063700108 0.1014188780154012 0.919217951249618 1.0 0.9638114747340998 3 P35580 1
159
+ Rho GTPase-activating protein domain [IPR000198] 0.4859618717504292 0.0970973812398271 0.9226490605044588 1.0 0.9659568152763603 2 Q9H0H5 1
160
+ ABC-transporter extension domain [IPR032781] 0.4814558058925536 0.0923809487618697 0.9263953753801112 1.0 0.9686799898438684 2 Q9NUQ8 1
161
+ Putative RNA methylase domain [IPR000241] 0.4672443674176719 0.0789521355964671 0.937070694418318 1.0 0.9753836359277552 2 Q9BV44 1
162
+ Target SNARE coiled-coil homology domain [IPR000727] 0.316294565830746 0.0736913702855453 0.9412559656340738 1.0 0.9779571252082956 6 Q86Y82,O15400 2
163
+ Alanyl-tRNA synthetase, class IIc, N-terminal [IPR018164] 0.4478336221837031 0.0639301773176924 0.9490258233955448 1.0 0.9803123890019914 2 Q5JTZ9 1
164
+ Alanyl-tRNA synthetase, class IIc, core domain [IPR018165] 0.4478336221837031 0.0639301773176924 0.9490258233955448 1.0 0.9803123890019914 2 Q5JTZ9 1
165
+ Peptidase S9A, N-terminal domain [IPR023302] 0.4443674176776431 0.0616214385312713 0.9508643039054788 1.0 0.9809676482671972 2 P48147 1
166
+ Peptidase S9, prolyl oligopeptidase, catalytic domain [IPR001375] 0.4443674176776431 0.0616214385312713 0.9508643039054788 1.0 0.9809676482671972 2 P48147 1
167
+ RNA 3'-terminal phosphate cyclase domain [IPR023797] 0.4343154246100542 0.0555178715485274 0.9557258924705918 1.0 0.983223385975635 2 Q9Y2P8 1
168
+ RNA 3'-terminal phosphate cyclase, insert domain [IPR013791] 0.4343154246100542 0.0555178715485274 0.9557258924705918 1.0 0.983223385975635 2 Q9Y2P8 1
169
+ Ribosomal protein L7Ae/L30e/S12e/Gadd45 [IPR004038] 0.3133240804996469 0.0536624551456357 0.9572040961318428 1.0 0.9837707363104388 5 P55769,Q9NX24,P25398,P62424 4
170
+ Peptidase S8/S53 domain [IPR000209] 0.4249566724436717 0.050579009639183 0.9596609892940612 1.0 0.985337189177359 2 O14773 1
171
+ Clp ATPase, C-terminal [IPR019489] 0.3999999999999936 0.0404718819828313 0.9677169235955834 1.0 0.9912406375807232 2 O76031 1
172
+ S100/CaBP-9k-type, calcium binding, subdomain [IPR013787] 0.389601386481797 0.0373837842295202 0.97017900194328 1.0 0.9933462424588926 2 P60903 1
173
+ Zn-dependent metallo-hydrolase, RNA specificity domain [IPR011108] 0.3393414211438419 0.028944744732274 0.9769086594208628 1.0 0.994030584517808 2 Q9UKF6 1
174
+ Ribosome receptor lysine/proline rich [IPR007794] 0.2928942807625527 0.0265702168713498 0.978802528363047 1.0 0.994030584517808 2 Q86UP2 1
175
+ Zinc finger, PARP-type [IPR001510] 0.2863084922010316 0.0264302430609468 0.9789141720967236 1.0 0.994030584517808 2 P49916 1
176
+ CoA-binding [IPR003781] 0.2814558058925344 0.0263454044020797 0.9789818399895108 1.0 0.994030584517808 2 P53597 1
177
+ 2-oxoacid dehydrogenase acyltransferase, catalytic domain [IPR001078] 0.3706657420249655 0.0244289966999224 0.9805104192017932 1.0 0.9949719414984736 3 P11182,P36957 2
178
+ SANT domain [IPR017884] 0.2625911774921806 0.0241622848771451 0.9807231616488636 1.0 0.9949719414984736 8 Q92922,O94776,Q99543,Q13330,Q8TAQ2,Q96KC8,O60264 7
179
+ YTH domain [IPR007275] 0.2951786333680163 0.0235166097132319 0.9812381895135804 1.0 0.9950813838884608 4 Q9Y5A9,Q96MU7,Q9H6S0 3
180
+ Exonuclease, RNase T/DNA polymerase III [IPR013520] 0.3500854290958557 0.0200211886073166 0.9840264698880103 1.0 0.9961456063386452 3 Q9GZR2 1
181
+ E3 ligase, CCCH-type zinc finger [IPR041367] 0.3481276005547852 0.0196858594907186 0.9842939710870235 1.0 0.9961456063386452 3 Q86VM9,Q9UPT8 2
182
+ Glutamine amidotransferase type 2 domain [IPR017932] 0.3377253814147021 0.0181134945121034 0.9855483126541916 1.0 0.9961456063386452 3 Q06203,P08243 2
183
+ ATP-citrate lyase/succinyl-CoA ligase [IPR005811] 0.2816510579257659 0.0169426143264337 0.986482396321996 1.0 0.9964252319205622 4 Q9P2R7,Q96I99,P53597 3
184
+ SCP2 sterol-binding domain [IPR003033] 0.3262829403606105 0.0167445971496722 0.9866403687593128 1.0 0.9964252319205622 3 P22307,P51659 2
185
+ GTP binding domain [IPR006073] 0.2511902662165644 0.0114717266314959 0.9908470871900872 1.0 0.9990223931900052 12 Q8NC60,Q9NTK5 2
interpro_domain/selections.json ADDED
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