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- interpro_active_site/advanced/idx2term.json +1 -0
- interpro_active_site/basic/idx2term.json +1 -0
- interpro_active_site/consensus.joblib +3 -0
- interpro_active_site/df_merge.tsv +1 -0
- interpro_active_site/metrics.json +7 -0
- interpro_active_site/paths.json +1 -0
- interpro_active_site/result.tsv +5 -0
- interpro_active_site/selections.json +1 -0
- interpro_binding_site/advanced/idx2term.json +1 -0
- interpro_binding_site/basic/idx2term.json +1 -0
- interpro_binding_site/basic/plot_0.png +3 -0
- interpro_binding_site/consensus.joblib +3 -0
- interpro_binding_site/df_merge.tsv +1 -0
- interpro_binding_site/metrics.json +7 -0
- interpro_binding_site/paths.json +1 -0
- interpro_binding_site/result.tsv +6 -0
- interpro_binding_site/selections.json +1 -0
- interpro_conserved_site/advanced/idx2term.json +1 -0
- interpro_conserved_site/basic/idx2term.json +1 -0
- interpro_conserved_site/basic/plot_0.png +3 -0
- interpro_conserved_site/basic/plot_1.png +3 -0
- interpro_conserved_site/consensus.joblib +3 -0
- interpro_conserved_site/df_merge.tsv +1 -0
- interpro_conserved_site/metrics.json +7 -0
- interpro_conserved_site/paths.json +1 -0
- interpro_conserved_site/result.tsv +29 -0
- interpro_conserved_site/selections.json +1 -0
- interpro_domain/advanced/idx2term.json +1 -0
- interpro_domain/basic/idx2term.json +1 -0
- interpro_domain/basic/plot_0.png +3 -0
- interpro_domain/basic/plot_1.png +3 -0
- interpro_domain/basic/plot_2.png +3 -0
- interpro_domain/basic/plot_3.png +3 -0
- interpro_domain/basic/plot_4.png +3 -0
- interpro_domain/consensus.joblib +3 -0
- interpro_domain/df_merge.tsv +3 -0
- interpro_domain/metrics.json +7 -0
- interpro_domain/paths.json +1 -0
- interpro_domain/result.tsv +168 -0
- interpro_domain/selections.json +0 -0
- interpro_family/advanced/idx2term.json +1 -0
- interpro_family/basic/idx2term.json +1 -0
- interpro_family/basic/plot_0.png +3 -0
- interpro_family/basic/plot_1.png +3 -0
- interpro_family/basic/plot_2.png +3 -0
- interpro_family/basic/plot_3.png +3 -0
- interpro_family/basic/plot_4.png +3 -0
- interpro_family/consensus.joblib +3 -0
- interpro_family/df_merge.tsv +2 -0
- interpro_family/metrics.json +7 -0
interpro_active_site/advanced/idx2term.json
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{}
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interpro_active_site/basic/idx2term.json
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{}
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interpro_active_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:9ac140818f7f18dbff345c5d8ed7e962d8f50aba7eff23b3b0172014d7608c9d
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size 62733
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interpro_active_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_active_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2734,
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"annotations_size": 55,
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"title": "Average number of proteins per term",
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"value": 2.4
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}
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interpro_active_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C163/C163_val_log2fc"}
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interpro_active_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Serine carboxypeptidase, serine active site [IPR018202] 0.9637495422922008 2.0555217763672484 0.0398286345436331 0.8930498843569742 0.4892356070245213 3 Q9H3G5,P10619 2
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Histidine acid phosphatase active site [IPR033379] 0.8151537335285564 0.8912008299782259 0.3728214392381312 0.9999999999928136 0.8543824649207176 2 P11117 1
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Protein-tyrosine phosphatase, active site [IPR016130] 0.3510248901903279 0.0330122524640235 0.973664816914256 1.0 0.973925069175843 2 P18031 1
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Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345] 0.3466325036603207 0.0326858985933621 0.973925069175843 1.0 0.973925069175843 2 Q9NQ88 1
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interpro_active_site/selections.json
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{"all_annotations": ["ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-CoA lyase, active site [IPR000138]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Peptidase family C14A, His active site [IPR016129]", "Peptidase family C14A, cysteine active site [IPR033139]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]", "Uracil-DNA glycosylase, active site [IPR018085]"], "available_proteins": ["ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "AKT2", "APEH", "ATP5A1", "ATP5B", "ATP6V1A", "ATP6V1B2", "AURKA", "BLMH", "BUB1", "CAMK2G", "CAPN1", "CASP3", "CASP6", "CASP7", "CASP8", "CDK1", "CDK12", "CDK2", "CDK4", "CDK6", "CHEK2", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "FASN", "FECH", "G6PD", "GAA", "GANAB", "GAPDH", "GART", "GLUD1", "GSK3A", "GSK3B", "GSR", "GUSB", "HADHB", "HMGCL", "HMGCS1", "LDHA", "LDHB", "LONP1", "MAP2K1", "MAP2K2", "MAP2K3", "MAPK1", "MASTL", "MDH1", "MDH2", "NEK9", "NME1", "NME2", "PAK1", "PAK2", "PASK", "PBK", "PGAM1", "PKM", "PKMYT1", "PKN1", "PKN2", "PLK1", "PREP", "PRKACA", "PRPF4B", "PTK7", "PTPN1", "RIPK1", "RNASET2", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SUCLG1", "TALDO1", "TIGAR", "TOP1", "TPI1", "TPP2", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2G2", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "UMPS", "UNG", "VRK1", "WNK1"], "leading_proteins": ["ACP2", "CPVL", "CTSA", "PTPN1", "TIGAR"]}
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interpro_binding_site/advanced/idx2term.json
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{}
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interpro_binding_site/basic/idx2term.json
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{"0": "Beta tubulin, autoregulation binding site [IPR013838]"}
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interpro_binding_site/basic/plot_0.png
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Git LFS Details
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interpro_binding_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:c929420bc9f7147dd807a474a87dc29c91581b10ef69df72ce436274891d03c6
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size 61128
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interpro_binding_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_binding_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2734,
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"annotations_size": 31,
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"title": "Average number of proteins per term",
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"value": 4.032258064516129
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}
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interpro_binding_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C163/C163_val_log2fc"}
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interpro_binding_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Peptidase M16, zinc-binding site [IPR001431] 0.4871478385553805 0.5436225621761317 0.5867012305126968 0.9999999999987288 1.0 5 P22695 1
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Beta tubulin, autoregulation binding site [IPR013838] 0.4618768328445751 0.5165420684692927 0.6054758649334977 0.9999999999996992 1.0 6 Q13885,Q9BVA1,P04350,P68371,P07437 5
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Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917] 0.4418008784773131 0.0538604443082465 0.9570463517646042 1.0 1.0 2 O75600 1
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Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798] 0.378477306002923 0.0360303285574895 0.9712581759566056 1.0 1.0 2 P34897 1
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PPM-type phosphatase, divalent cation binding [IPR000222] 0.3491947291361644 0.0328719228341991 0.973776723023549 1.0 1.0 2 Q9H0C8 1
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interpro_binding_site/selections.json
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{"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Adrenodoxin, iron-sulphur binding site [IPR018298]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT2", "APEX1", "AURKA", "BPNT1", "BUB1", "CALM3", "CALU", "CAMK2G", "CAPN1", "CAPNS1", "CDK1", "CDK12", "CDK2", "CDK4", "CDK6", "CETN2", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DCTD", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "EPS15", "EPS15L1", "FDX1", "FKBP10", "FKBP14", "FKBP7", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3A", "GSK3B", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "LETM1", "MACF1", "MAP2K1", "MAP2K2", "MAP2K3", "MAPK1", "MAPK14", "MCCC1", "MICU1", "MYH10", "MYH14", "MYH9", "MYO1B", "MYO1D", "NFS1", "NRDC", "NUCB1", "NUCB2", "PA2G4", "PAK1", "PAK2", "PASK", "PC", "PCCA", "PDCD6", "PEF1", "PGD", "PKMYT1", "PKN1", "PKN2", "PLCG1", "PLK1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1G", "PRKACA", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "STK4", "TKT", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UQCRC2", "VRK1"], "leading_proteins": ["GCAT", "ILKAP", "SHMT2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "UQCRC2"]}
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interpro_conserved_site/advanced/idx2term.json
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{}
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interpro_conserved_site/basic/idx2term.json
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{"0": "14-3-3 protein, conserved site [IPR023409]", "1": "Tubulin, conserved site [IPR017975]"}
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interpro_conserved_site/basic/plot_0.png
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Git LFS Details
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interpro_conserved_site/basic/plot_1.png
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Git LFS Details
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interpro_conserved_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:c3a77ee6212c4799976b768500bd4ccba0bedefc1242f0dee182ebfc44d27643
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size 62576
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interpro_conserved_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_conserved_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2734,
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"annotations_size": 264,
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"title": "Average number of proteins per term",
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"value": 2.496212121212121
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}
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interpro_conserved_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C163/C163_val_log2fc"}
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interpro_conserved_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Syntaxin/epimorphin, conserved site [IPR006012] 0.850549450549451 1.948693942522254 0.0513319856191736 0.9999990918363536 0.8469098711152967 4 O15400,Q13190,Q9P2W9 3
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Proteasome beta-type subunit, conserved site [IPR016050] 0.7339680901988976 1.7015521845901176 0.0888393474417366 0.9999999999784688 0.8469098711152967 8 P49721,P20618,P28072 3
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Tetraspanin, conserved site [IPR018503] 0.9923133235724744 1.5612647271059332 0.1184613024425216 0.9999999999999964 0.8469098711152967 2 O60637 1
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Haem oxygenase conserved site [IPR018207] 0.9901171303074676 1.5528353634956702 0.1204624718645903 0.999999999999998 0.8469098711152967 2 P30519 1
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Sterol reductase, conserved site [IPR018083] 0.9198389458272356 1.2833943793427391 0.1993539420557843 1.0 0.8488619468181786 2 Q14739 1
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| 7 |
+
14-3-3 protein, conserved site [IPR023409] 0.6209677419354843 1.2342912378220243 0.2170943997984613 1.0 0.855416739504385 6 P31946,P62258,P63104,Q04917,P27348 5
|
| 8 |
+
Glycoside hydrolase, family 29, conserved site [IPR018526] 0.8440702781844797 0.9974139100227531 0.3185636422587028 1.0 0.9151647649138884 2 Q9BTY2 1
|
| 9 |
+
Lysosome-associated membrane glycoprotein, conserved site [IPR018134] 0.8400439238653055 0.9824955143463616 0.3258557917435627 1.0 0.9151647649138884 2 P13473 1
|
| 10 |
+
Guanylate kinase, conserved site [IPR020590] 0.5803356033533678 0.8355813322961071 0.4033904742465211 1.0 0.9681371381916506 4 Q14168,O14936 2
|
| 11 |
+
Phosphatidylinositol 3/4-kinase, conserved site [IPR018936] 0.5714355023852891 0.7995940637013558 0.4239460279871105 1.0 0.9893404351342512 4 Q8NEB9 1
|
| 12 |
+
Profilin conserved site [IPR027310] 0.7891654465592963 0.7979376607947497 0.424906667057275 1.0 0.9893404351342512 2 P07737 1
|
| 13 |
+
Aldehyde dehydrogenase, cysteine active site [IPR016160] 0.4941095235270478 0.6564531997963384 0.5115325702751399 1.0 1.0 6 P51648 1
|
| 14 |
+
Dynamin, GTPase region, conserved site [IPR019762] 0.7357247437774499 0.6152553995604291 0.5383860668396432 1.0 1.0 2 P50570 1
|
| 15 |
+
Sugar transporter, conserved site [IPR005829] 0.7302342606149359 0.5973544298525242 0.5502707716570028 1.0 1.0 2 Q7L0J3 1
|
| 16 |
+
Ribosomal protein S9, conserved site [IPR020574] 0.7177891654465676 0.5574875062935098 0.5771943928745233 1.0 1.0 2 P82933 1
|
| 17 |
+
ABC transporter-like, conserved site [IPR017871] 0.4706606789864708 0.5362720336955965 0.5917705557675261 1.0 1.0 7 P08183,O75027,P28288 3
|
| 18 |
+
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752] 0.7097364568081985 0.5322464079765373 0.5945553446471574 1.0 1.0 2 Q13363 1
|
| 19 |
+
Tubulin, conserved site [IPR017975] 0.4618768328445753 0.5165420684692937 0.605475864933497 1.0 1.0 6 Q13885,Q9BVA1,P04350,P68371,P07437 5
|
| 20 |
+
3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180] 0.7024158125915086 0.5097014826120363 0.6102606141458531 1.0 1.0 2 P40939 1
|
| 21 |
+
Histidine triad, conserved site [IPR019808] 0.6098096632503704 0.2647504341056056 0.7912017225008983 1.0 1.0 2 Q96C86 1
|
| 22 |
+
Adenylate kinase, conserved site [IPR033690] 0.4208791208791227 0.2621153510373237 0.7932325120139545 1.0 1.0 4 P30085,P27144,P00568 3
|
| 23 |
+
Heat shock protein Hsp90, conserved site [IPR019805] 0.4558769681435372 0.2146451871038679 0.8300439607297061 1.0 1.0 3 P14625,P08238 2
|
| 24 |
+
Dynein light chain, type 1/2, conserved site [IPR019763] 0.5754026354319246 0.1963863375251911 0.8443077891227118 1.0 1.0 2 Q96FJ2 1
|
| 25 |
+
Short-chain dehydrogenase/reductase, conserved site [IPR020904] 0.3910054284873692 0.1720790371145245 0.8633753928825076 1.0 1.0 11 Q06136,Q8NBN7,Q53GQ0 3
|
| 26 |
+
Alpha-D-phosphohexomutase, conserved site [IPR016066] 0.5516105417276737 0.1570878153320707 0.875175640316199 1.0 1.0 2 P36871 1
|
| 27 |
+
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753] 0.3615055355471857 0.1178067129187128 0.9062208104506424 1.0 1.0 4 Q9UBQ7,Q13363 2
|
| 28 |
+
Thioredoxin, conserved site [IPR017937] 0.3584685340646922 0.0762234550983259 0.939241322500206 1.0 1.0 11 Q9H1E5,O95881 2
|
| 29 |
+
Mrp, conserved site [IPR000808] 0.4432650073206486 0.0545344486683742 0.9565093633463372 1.0 1.0 2 Q9Y5Y2 1
|
interpro_conserved_site/selections.json
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{"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "CBX family C-terminal motif [IPR033773]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Fork head domain conserved site 2 [IPR030456]", "Fork head domain conserved site1 [IPR018122]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site [IPR017958]", "Glutathione peroxidase conserved site [IPR029760]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Helix-turn-helix motif [IPR000047]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "Homeobox, conserved site [IPR017970]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Low-density lipoprotein (LDL) receptor class A, conserved site [IPR023415]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Molybdenum cofactor biosynthesis, conserved site [IPR008284]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase TruD, conserved site [IPR020119]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "RNA polymerase, subunit H/Rpb5, conserved site [IPR020608]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Rel homology domain, conserved site [IPR030492]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Transcription factor TFIIB, conserved site [IPR023486]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "ABCB1", "ABCB10", "ABCB7", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ACAA2", "ACAD9", "ACADM", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACBD5", "ACIN1", "ACLY", "ACSL1", "ACSL3", "ACSL4", "ACTN1", "ACTN2", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK4", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA6", "ANXA7", "AP1M1", "AP2M1", "AP2S1", "AP3M1", "APEX1", "APP", "ATAD1", "ATP5C1", "ATP5O", "BAG6", "BAK1", "BAZ1A", "BAZ1B", "BCS1L", "BDH2", "BOP1", "BPNT1", "BPTF", "BRD4", "BUD31", "CAD", "CALR", "CANX", "CAP1", "CAPZA1", "CAPZB", "CASK", "CBR1", "CBX1", "CBX3", "CBX5", "CBX8", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDX2", "CETN2", "CHAF1B", "CHD1", "CHD4", "CLGN", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "CORO1B", "CORO1C", "CPOX", "CRYZ", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4A", "CUL4B", "CUL5", "CYP51A1", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX55", "DDX6", "DHCR7", "DHFR", "DHRS7B", "DHX15", "DHX16", "DHX30", "DHX36", "DHX38", "DHX8", "DHX9", "DIDO1", "DIS3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNMT1", "DRG1", "DRG2", "DSG2", "DST", "DTL", "DTYMK", "DYNLL1", "DYNLL2", "EARS2", "ECH1", "ECHDC1", "ECHS1", "ECI1", "ECI2", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A2", "EIF4A3", "EIF4E", "ENO1", "EPB41", "EPB41L2", "EPB41L3", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FOXC1", "FUCA1", "FUCA2", "GAA", "GALK1", "GANAB", "GART", "GATB", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPA", "GMPPB", "GNPDA1", "GNS", "GPHN", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF2B", "GTF3C2", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HGS", "HIBADH", "HINT2", "HLA-A", "HLA-B", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA14", "HSPA1B", "HSPA2", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "ILVBL", "IMPDH1", "IMPDH2", "INA", "IQGAP1", "IVD", "KDM2A", "KDSR", "KIF11", "KIF20A", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF3A", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LAMP2", "LARS", "LARS2", "LBR", "LDLR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LSS", "MACF1", "MAPK1", "MAPK14", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME2", "MGST2", "MID1", "MIF", "MPI", "MPP1", "MPP2", "MPP6", "MPST", "MRC2", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFS8", "NDUFV1", "NEFL", "NEFM", "NES", "NFKB1", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NSD2", "NSF", "NUBP2", "NUBPL", "NUDT1", "NUDT5", "NUP153", "NUP37", "NVL", "OSBP", "OSBPL11", "OSBPL6", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PHF8", "PHGDH", "PI4KB", "PIK3C3", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLOD3", "PLRG1", "PLS3", "PNP", "POLA1", "POLD1", "POLR1B", "POLR1C", "POLR2B", "POLR2C", "POLR2E", "PPIB", "PPID", "PPIE", "PPIF", "PPIH", "PPIL1", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS2", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PUS7", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RCL1", "RDH13", "RDX", "RIDA", "RNF14", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS28", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RSF1", "RTN4IP1", "S100A10", "S100A11", "SART1", "SBDS", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC27A4", "SLC2A1", "SLIT2", "SMARCA4", "SMU1", "SNRNP40", "SNU13", "SORD", "SPATA5L1", "SPTBN1", "SPTBN2", "SRM", "STAM", "STMN1", "STOM", "STRN", "STX12", "STX18", "STX5", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SV2A", "SYNE2", "TBL3", "TCP1", "THOC6", "TK1", "TLN1", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM21", "TRIM24", "TRIM25", "TRIM27", "TRIM28", "TRIM33", "TRIM35", "TRIP13", "TSFM", "TSPAN3", "TSPAN6", "TTF2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UBFD1", "UHRF1", "USP10", "USP11", "USP14", "USP15", "USP47", "USP48", "USP5", "USP7", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "VPS4B", "WARS", "WDHD1", "WDR1", "WDR18", "WDR3", "WDR36", "WDR41", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2"], "leading_proteins": ["ABCB1", "ABCB7", "ABCD3", "AK1", "AK4", "ALDH3A2", "CASK", "CMPK1", "CTBP1", "DCPS", "DNM2", "DYNLL2", "FUCA2", "GRHPR", "HADHA", "HMOX2", "HSD17B12", "HSP90AB1", "HSP90B1", "KDSR", "LAMP2", "LBR", "MPP2", "MRPS9", "NUBP2", "PFN1", "PGM1", "PIK3C3", "PSMB1", "PSMB2", "PSMB6", "RDH13", "STX18", "STX5", "STX7", "SV2A", "TMX4", "TSPAN3", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TXNDC12", "YWHAB", "YWHAE", "YWHAH", "YWHAQ", "YWHAZ"]}
|
interpro_domain/advanced/idx2term.json
ADDED
|
@@ -0,0 +1 @@
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| 1 |
+
{}
|
interpro_domain/basic/idx2term.json
ADDED
|
@@ -0,0 +1 @@
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|
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| 1 |
+
{"0": "14-3-3 domain [IPR023410]", "1": "Tubulin/FtsZ, 2-layer sandwich domain [IPR018316]", "2": "Tubulin/FtsZ, GTPase domain [IPR003008]", "3": "Rab-GTPase-TBC domain [IPR000195]", "4": "Exoribonuclease, phosphorolytic domain 1 [IPR001247]"}
|
interpro_domain/basic/plot_0.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_1.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_2.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_3.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_4.png
ADDED
|
Git LFS Details
|
interpro_domain/consensus.joblib
ADDED
|
@@ -0,0 +1,3 @@
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| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:2ceeb007adb785602a3fdfb4eab5673188f45bfea73b9c44817949bb11aa8875
|
| 3 |
+
size 95383
|
interpro_domain/df_merge.tsv
ADDED
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@@ -0,0 +1,3 @@
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| 1 |
+
term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
| 2 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 4 6 2.2419797884745827 0.0249626786104277 2.813106796116505 6.104368932038835 1.6405397264547834 0.1100883340733615 1.2852875686886795 0.8042848477475721 1.100790504333474 0.1612592696854457 0.0234665278248752 0.0573151884822011 0.1105474823156849 0.0001450038876457 0.0001590313802548
|
| 3 |
+
Target SNARE coiled-coil homology domain [IPR000727] 3 6 2.011715832490922 0.0442499006824004 3.5024271844660193 8.266990291262136 0.5942034778060385 0.4012381903331891 1.9023475359698396 2.183694577914796 1.0582363712887182 0.3038263160802639 0.089995351488155 1.0 1.0 0.1227655047468798 0.031065887399213
|
interpro_domain/metrics.json
ADDED
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@@ -0,0 +1,7 @@
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| 1 |
+
{
|
| 2 |
+
"type_of_task": "ranksum",
|
| 3 |
+
"signature_size": 2734,
|
| 4 |
+
"annotations_size": 2335,
|
| 5 |
+
"title": "Average number of proteins per term",
|
| 6 |
+
"value": 2.091648822269807
|
| 7 |
+
}
|
interpro_domain/paths.json
ADDED
|
@@ -0,0 +1 @@
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|
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|
| 1 |
+
{"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C163/C163_val_log2fc"}
|
interpro_domain/result.tsv
ADDED
|
@@ -0,0 +1,168 @@
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|
|
|
| 1 |
+
Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
|
| 2 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.8495950436501571 2.2419797884745827 0.0249626786104277 1.0 0.6997777870933648 6 Q8WUJ1,O43169,Q9UMX5,O15173 4
|
| 3 |
+
P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.8956043956043959 2.127399844044493 0.0333868751040196 1.0 0.6997777870933648 4 P05023,P16615,P20020 3
|
| 4 |
+
GMP phosphodiesterase, delta subunit [IPR008015] 0.9652142072500914 2.061102616000461 0.0392932513099215 1.0 0.6997777870933648 3 Q13432,A6NIH7 2
|
| 5 |
+
Target SNARE coiled-coil homology domain [IPR000727] 0.7953009934313562 2.011715832490922 0.0442499006824004 1.0 0.6997777870933648 6 Q9UEU0,O15400,Q13190 3
|
| 6 |
+
Reticulon [IPR003388] 0.9194434273160016 1.8854488214938157 0.0593692678981987 1.0 0.6997777870933648 3 O95197,Q9NQC3 2
|
| 7 |
+
Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.9157817649212744 1.8712891560973135 0.061305012765894 1.0 0.6997777870933648 3 P16615,P20020 2
|
| 8 |
+
Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.9157817649212744 1.8712891560973135 0.061305012765894 1.0 0.6997777870933648 3 P16615,P20020 2
|
| 9 |
+
TRAM/LAG1/CLN8 homology domain [IPR006634] 0.9000366166239474 1.810233487827699 0.0702595865104487 1.0 0.6997777870933648 3 Q96G23,Q15629 2
|
| 10 |
+
Polyketide synthase, enoylreductase domain [IPR020843] 0.6962810521131657 1.5550202047942516 0.1199412573870286 1.0 0.7116184545651172 7 Q99536 1
|
| 11 |
+
GOLD domain [IPR009038] 0.6903024938180864 1.5495270371434533 0.1212550772197946 1.0 0.7116184545651172 6 Q15363 1
|
| 12 |
+
EXPERA domain [IPR033118] 0.9809663250366032 1.5177075992642286 0.1290881274886621 1.0 0.7116184545651172 2 Q15125 1
|
| 13 |
+
Transcription factor CBF/NF-Y/archaeal histone domain [IPR003958] 0.819864678646473 1.4957761098293934 0.1347120089325175 1.0 0.7148921383123374 3 Q9NRF9 1
|
| 14 |
+
Peptidase M16, C-terminal [IPR007863] 0.6771878520103266 1.469086563172601 0.1418093118052323 1.0 0.7245440379274319 7 Q10713,P22695,Q5JRX3 3
|
| 15 |
+
Peptidase M16, N-terminal [IPR011765] 0.6771878520103266 1.469086563172601 0.1418093118052323 1.0 0.7245440379274319 7 Q10713,P22695,Q5JRX3 3
|
| 16 |
+
ABC transporter type 1, transmembrane domain [IPR011527] 0.7296135217969503 1.4547801986647666 0.1457301217431079 1.0 0.7245440379274319 4 O75027,P28288 2
|
| 17 |
+
Fatty acid hydroxylase [IPR006694] 0.963030746705711 1.4488555380394998 0.1473779300614834 1.0 0.7245440379274319 2 O75845 1
|
| 18 |
+
Peptidase M28 [IPR007484] 0.806298059318931 1.4421375820726978 0.1492635647709495 1.0 0.7245440379274319 3 P02786,Q7Z2K6 2
|
| 19 |
+
MENTAL domain [IPR019498] 0.9505856515373377 1.4011062917279624 0.1611822904374009 1.0 0.731392713348177 2 O95772 1
|
| 20 |
+
Peptidase M1, membrane alanine aminopeptidase [IPR014782] 0.680767202786488 1.3741331566851225 0.1694003475832002 1.0 0.7328891843028982 5 P09960 1
|
| 21 |
+
Aminopeptidase N-like , N-terminal domain [IPR045357] 0.680767202786488 1.3741331566851225 0.1694003475832002 1.0 0.7328891843028982 5 P09960 1
|
| 22 |
+
Band 7 domain [IPR001107] 0.6588403108021395 1.364938189785066 0.1722724778570841 1.0 0.7335580562752343 8 Q9UJZ1,P27105,O75955 3
|
| 23 |
+
FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 0.6571486926616799 1.3363477293126889 0.1814356427207695 1.0 0.7335724725207032 9 Q9Y680,Q96AY3,Q9NWM8 3
|
| 24 |
+
Phospholipase D/Transphosphatidylase [IPR001736] 0.9315519765739384 1.3281781520591711 0.1841192602121324 1.0 0.7335724725207032 2 Q8N2A8 1
|
| 25 |
+
Endoplasmic reticulum vesicle transporter, N-terminal [IPR039542] 0.9297218155197696 1.3211750139982603 0.1864430154356182 1.0 0.7335724725207032 2 Q9Y282 1
|
| 26 |
+
Endoplasmic reticulum vesicle transporter, C-terminal [IPR012936] 0.9297218155197696 1.3211750139982603 0.1864430154356182 1.0 0.7335724725207032 2 Q9Y282 1
|
| 27 |
+
Acyl transferase [IPR014043] 0.9253294289897528 1.3043756826441706 0.1921055221755563 1.0 0.7335724725207032 2 P49327 1
|
| 28 |
+
ERAP1-like C-terminal domain [IPR024571] 0.7663367224858864 1.283899247490292 0.1991772105994409 1.0 0.7441260587995113 3 Q9UIQ6 1
|
| 29 |
+
PA domain [IPR003137] 0.9187408491947302 1.2792007023399703 0.2008263886084891 1.0 0.7455160848979684 2 Q8TCT8 1
|
| 30 |
+
Mitochondrial outer membrane transport complex Sam37/metaxin, N-terminal domain [IPR019564] 0.9070278184480282 1.2345290089496554 0.2170058439831579 1.0 0.7555558670106908 2 Q13505 1
|
| 31 |
+
Metaxin, glutathione S-transferase domain [IPR033468] 0.9070278184480282 1.2345290089496554 0.2170058439831579 1.0 0.7555558670106908 2 Q13505 1
|
| 32 |
+
14-3-3 domain [IPR023410] 0.6209677419354843 1.2342912378220243 0.2170943997984613 1.0 0.7555558670106908 6 P31946,P62258,P63104,Q04917,P27348 5
|
| 33 |
+
Peptidase M3A/M3B catalytic domain [IPR001567] 0.752105455876968 1.227577369482563 0.2196056614416357 1.0 0.7555558670106908 3 P52888,Q99797 2
|
| 34 |
+
Aminotransferase, class I/classII [IPR004839] 0.6146523714932188 1.1844267882982318 0.2362441612564541 1.0 0.7752806779388635 7 O15269 1
|
| 35 |
+
Dynamin, GTPase domain [IPR001401] 0.7359941413401686 1.1639273098236431 0.2444534710589265 1.0 0.7873087654104738 3 P50570,O60313 2
|
| 36 |
+
Major facilitator superfamily domain [IPR020846] 0.7305016477480777 1.142269046497348 0.2533422033948524 1.0 0.7993878430481228 3 P53985,Q7L0J3 2
|
| 37 |
+
Complex 1 LYR protein domain [IPR008011] 0.8825036603221119 1.141452811922414 0.2536815382007105 1.0 0.7993878430481228 2 Q9NU23 1
|
| 38 |
+
L27 domain [IPR004172] 0.7286708165507141 1.1350552787361643 0.2563521577650274 1.0 0.8009213975300677 3 Q14168,O14936 2
|
| 39 |
+
L27 domain, C-terminal [IPR014775] 0.7286708165507141 1.1350552787361643 0.2563521577650274 1.0 0.8009213975300677 3 Q14168,O14936 2
|
| 40 |
+
LEM domain [IPR003887] 0.596715711571054 1.1229522214357008 0.2614577868843595 1.0 0.8116442232718967 6 Q86XL3,P42167 2
|
| 41 |
+
ATPase family AAA domain-containing protein 3, N-terminal [IPR021911] 0.8660322108345528 1.0793962137931945 0.2804111380668095 1.0 0.8280895536184857 2 Q9NVI7 1
|
| 42 |
+
START domain [IPR002913] 0.8579795021961986 1.0492246921529451 0.2940747167023865 1.0 0.841273078551235 2 Q14849 1
|
| 43 |
+
FAD-binding domain, PCMH-type [IPR016166] 0.8546852122986848 1.0369173696721328 0.29977436815224 1.0 0.8453899844835576 2 O00116 1
|
| 44 |
+
FAD linked oxidase, N-terminal [IPR006094] 0.8546852122986848 1.0369173696721328 0.29977436815224 1.0 0.8453899844835576 2 O00116 1
|
| 45 |
+
Ion transporter-like, CBS domain [IPR044751] 0.8524890190336762 1.0287246073597234 0.3036091032459103 1.0 0.8465193264478194 2 Q8NE01 1
|
| 46 |
+
CNNM, transmembrane domain [IPR002550] 0.8524890190336762 1.0287246073597234 0.3036091032459103 1.0 0.8465193264478194 2 Q8NE01 1
|
| 47 |
+
Major sperm protein (MSP) domain [IPR000535] 0.700109849871842 1.0230032971631031 0.3063062868771395 1.0 0.8474151676712118 3 Q8NHP6,Q9P0L0 2
|
| 48 |
+
Syntaxin, N-terminal domain [IPR006011] 0.8499267935578338 1.019179035799822 0.3081179774530445 1.0 0.8474151676712118 2 O15400 1
|
| 49 |
+
Ribosomal protein L18e/L15P [IPR021131] 0.6979128524350054 1.0144303854322283 0.3103774315045426 1.0 0.8510361159674601 3 P46776,Q9P015 2
|
| 50 |
+
Alpha-L-fucosidase, C-terminal [IPR031919] 0.8440702781844797 0.9974139100227531 0.3185636422587028 1.0 0.8589446936190197 2 Q9BTY2 1
|
| 51 |
+
Exportin-2, central domain [IPR013713] 0.6718763398073735 0.9135268956155952 0.3609654948529073 1.0 0.871367775221317 3 P55060 1
|
| 52 |
+
Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain [IPR044862] 0.6704023751380082 0.9078588966865834 0.3639527763521801 1.0 0.8716202387511186 3 Q32P28 1
|
| 53 |
+
CBS domain [IPR000644] 0.5432653577275511 0.8777974178748734 0.3800536659934905 1.0 0.8812742316898127 6 P51790,Q8NE01 2
|
| 54 |
+
Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.5366037820357618 0.8277081036213325 0.4078358287169552 1.0 0.8958576294017784 7 Q8IWA4,Q9H223,P50570,O60313 4
|
| 55 |
+
Dynamin, N-terminal [IPR045063] 0.5366037820357618 0.8277081036213325 0.4078358287169552 1.0 0.8958576294017784 7 Q8IWA4,Q9H223,P50570,O60313 4
|
| 56 |
+
4Fe-4S ferredoxin-type, iron-sulphur binding domain [IPR017896] 0.5777405400292173 0.8250638150807392 0.4093353617141551 1.0 0.898306456393376 4 Q16134 1
|
| 57 |
+
Immunoglobulin-like domain [IPR007110] 0.5385269657681784 0.8168424857147765 0.41401844919679 1.0 0.90264526505556 8 Q08722 1
|
| 58 |
+
Phosphoinositide 3-kinase, accessory (PIK) domain [IPR001263] 0.7902635431918089 0.8018286536741203 0.4226520813110972 1.0 0.9071145067757964 2 Q8NEB9 1
|
| 59 |
+
SCP2 sterol-binding domain [IPR003033] 0.642255584035152 0.8007906618048585 0.423252845971674 1.0 0.9071145067757964 3 P22307,Q6YN16 2
|
| 60 |
+
Immunoglobulin subtype 2 [IPR003598] 0.5625919181744207 0.7640876899830902 0.4448149876384328 1.0 0.9141098579823383 4 Q13308,P35613 2
|
| 61 |
+
Immunoglobulin subtype [IPR003599] 0.5625919181744207 0.7640876899830902 0.4448149876384328 1.0 0.9141098579823383 4 Q13308,P35613 2
|
| 62 |
+
Phosphatidylinositol 3-/4-kinase, catalytic domain [IPR000403] 0.5376081544256196 0.7519321750613448 0.4520918477743727 1.0 0.9141098579823383 5 Q8NEB9 1
|
| 63 |
+
Legume-like lectin [IPR005052] 0.7737920937042526 0.7439839934602608 0.4568861588041475 1.0 0.914746816975208 2 Q12907 1
|
| 64 |
+
Arfaptin homology (AH) domain [IPR010504] 0.7726939970717484 0.7401692240794983 0.4591973192144465 1.0 0.914868379151649 2 P53365 1
|
| 65 |
+
LEM-like domain [IPR013146] 0.7690336749634026 0.7274930944329745 0.4669239441006854 1.0 0.9231730816893312 2 P42167 1
|
| 66 |
+
Guanylate kinase/L-type calcium channel beta subunit [IPR008145] 0.5238781819962273 0.6940799724442083 0.4876320575909942 1.0 0.929011040536232 5 Q14168,O14936 2
|
| 67 |
+
Guanylate kinase-like domain [IPR008144] 0.5238781819962273 0.6940799724442083 0.4876320575909942 1.0 0.929011040536232 5 Q14168,O14936 2
|
| 68 |
+
Sec23, C-terminal [IPR037550] 0.756954612005859 0.6861162610696023 0.4926397975243128 1.0 0.9309775435639084 2 Q15437 1
|
| 69 |
+
Ubiquitin-like domain, USP-type [IPR028135] 0.7562225475841915 0.6836319868135489 0.4942075809562705 1.0 0.9309775435639084 2 Q9Y4E8 1
|
| 70 |
+
Glycogen synthase kinase 3, catalytic domain [IPR039192] 0.7415812591508145 0.6345494437703554 0.5257223098492507 1.0 0.9518412032168694 2 P49840 1
|
| 71 |
+
Potentiating neddylation domain [IPR005176] 0.7393850658858067 0.627290541268692 0.5304688024913464 1.0 0.95188311980619 2 Q92564 1
|
| 72 |
+
Tim44-like domain [IPR007379] 0.739019033674967 0.6260834600581984 0.5312602003426179 1.0 0.9520280643131334 2 O43615 1
|
| 73 |
+
OCRE domain [IPR041591] 0.7371888726207914 0.6200599027750695 0.5352183496048228 1.0 0.953817500812266 2 P52756 1
|
| 74 |
+
GTPase effector domain [IPR020850] 0.7357247437774499 0.6152553995604291 0.5383860668396432 1.0 0.953817500812266 2 P50570 1
|
| 75 |
+
Dynamin GTPase effector [IPR003130] 0.7357247437774499 0.6152553995604291 0.5383860668396432 1.0 0.953817500812266 2 P50570 1
|
| 76 |
+
Dynamin stalk domain [IPR000375] 0.7357247437774499 0.6152553995604291 0.5383860668396432 1.0 0.953817500812266 2 P50570 1
|
| 77 |
+
EB1, C-terminal [IPR004953] 0.7316983894582697 0.602109895869114 0.5471009877824113 1.0 0.9586144530361188 2 Q15555 1
|
| 78 |
+
NOPS [IPR012975] 0.5862321493958258 0.5969670838059369 0.550529357217949 1.0 0.9586144530361188 3 P23246,Q15233 2
|
| 79 |
+
Importin-beta, N-terminal domain [IPR001494] 0.509719371780378 0.5969568641069365 0.5505361805230986 1.0 0.9586144530361188 13 Q92973 1
|
| 80 |
+
Phospholipid/glycerol acyltransferase [IPR002123] 0.5772776003610933 0.5659456418214303 0.5714307333054089 1.0 0.9586925298581196 3 Q8NF37 1
|
| 81 |
+
Zinc finger, CHHC-type [IPR012996] 0.576711827169535 0.564003032774293 0.5727520681593476 1.0 0.9586925298581196 3 P31943,P55795 2
|
| 82 |
+
v-SNARE, coiled-coil homology domain [IPR042855] 0.5713846883798351 0.5458177733436642 0.5851912047359886 1.0 0.9638227971587324 3 O75396 1
|
| 83 |
+
Longin domain [IPR010908] 0.5713846883798351 0.5458177733436642 0.5851912047359886 1.0 0.9638227971587324 3 O75396 1
|
| 84 |
+
Peptidyl-prolyl cis-trans isomerase, PpiC-type [IPR000297] 0.712298682284042 0.5402285035011826 0.5890394579134768 1.0 0.9685965733999776 2 Q13526 1
|
| 85 |
+
ABC transporter-like, ATP-binding domain [IPR003439] 0.4706606789864708 0.5362720336955965 0.5917705557675261 1.0 0.971849933080956 7 P08183,O75027,P28288 3
|
| 86 |
+
HECT domain [IPR000569] 0.4646591000325346 0.5283817217106757 0.5972344212982421 1.0 0.971849933080956 6 Q05086,Q96J02 2
|
| 87 |
+
CTP synthase, N-terminal [IPR017456] 0.7075402635431933 0.5254419238643181 0.5992760159039561 1.0 0.971849933080956 2 Q9NRF8 1
|
| 88 |
+
CTP synthase GATase domain [IPR033828] 0.7075402635431933 0.5254419238643181 0.5992760159039561 1.0 0.971849933080956 2 Q9NRF8 1
|
| 89 |
+
Tubulin/FtsZ, 2-layer sandwich domain [IPR018316] 0.4618768328445753 0.5165420684692937 0.605475864933497 1.0 0.971849933080956 6 Q13885,Q9BVA1,P04350,P68371,P07437 5
|
| 90 |
+
Tubulin/FtsZ, GTPase domain [IPR003008] 0.4618768328445753 0.5165420684692937 0.605475864933497 1.0 0.971849933080956 6 Q13885,Q9BVA1,P04350,P68371,P07437 5
|
| 91 |
+
3-hydroxyacyl-CoA dehydrogenase, NAD binding [IPR006176] 0.7024158125915086 0.5097014826120363 0.6102606141458531 1.0 0.971849933080956 2 P40939 1
|
| 92 |
+
3-hydroxyacyl-CoA dehydrogenase, C-terminal [IPR006108] 0.7024158125915086 0.5097014826120363 0.6102606141458531 1.0 0.971849933080956 2 P40939 1
|
| 93 |
+
Septin-type guanine nucleotide-binding (G) domain [IPR030379] 0.4919496920183394 0.4938049810141267 0.621443915060911 1.0 0.9758382929840128 4 Q9NVA2,Q15019 2
|
| 94 |
+
CS domain [IPR007052] 0.4521653510995708 0.44176679698378 0.6586579676109257 1.0 0.9927260849866868 8 Q9HB71 1
|
| 95 |
+
Peptidase M20, dimerisation domain [IPR011650] 0.6760614934114203 0.4319809510619236 0.665755258000118 1.0 0.9927260849866868 2 Q8IYS1 1
|
| 96 |
+
Chromo domain subgroup [IPR017984] 0.5331380446722812 0.421563008866168 0.6733440112685196 1.0 0.9927260849866868 3 Q13185,P45973 2
|
| 97 |
+
Chromo shadow domain [IPR008251] 0.5331380446722812 0.421563008866168 0.6733440112685196 1.0 0.9927260849866868 3 Q13185,P45973 2
|
| 98 |
+
MIT domain [IPR007330] 0.6694729136164033 0.4134570407488676 0.6792717906525445 1.0 0.9927260849866868 2 Q8N0X7 1
|
| 99 |
+
Heat shock protein DnaJ, cysteine-rich domain [IPR001305] 0.5283778835591357 0.406968837794688 0.6840308758221081 1.0 0.9927260849866868 3 Q96EY1,O60884 2
|
| 100 |
+
R3H domain [IPR001374] 0.5247268345916173 0.3959197048657087 0.6921642639916141 1.0 0.9927260849866868 3 O95453 1
|
| 101 |
+
Gamma tubulin complex component protein, N-terminal [IPR041470] 0.6559297218155243 0.3766103191943774 0.7064632179091974 1.0 0.9927260849866868 2 Q9BSJ2 1
|
| 102 |
+
Gamma tubulin complex component, C-terminal [IPR040457] 0.6559297218155243 0.3766103191943774 0.7064632179091974 1.0 0.9927260849866868 2 Q9BSJ2 1
|
| 103 |
+
Heterogeneous nuclear ribonucleoprotein Q acidic domain [IPR041337] 0.6486090775988309 0.3574115280592297 0.7207837477993899 1.0 0.9927260849866868 2 O60506 1
|
| 104 |
+
Far upstream element-binding protein, C-terminal [IPR015096] 0.6475109809663274 0.3545765582673524 0.7229068403100969 1.0 0.9927260849866868 2 Q92945 1
|
| 105 |
+
Rab-GTPase-TBC domain [IPR000195] 0.4186217008797657 0.3403890062388479 0.7335635966973897 1.0 0.9927260849866868 6 O60343,Q4KMP7,Q9Y3P9,Q8TC07,Q66K14 5
|
| 106 |
+
Peptidase S9A, N-terminal domain [IPR023302] 0.6405563689604712 0.3368990176203791 0.7361930259006979 1.0 0.9927260849866868 2 Q4J6C6 1
|
| 107 |
+
Fragile X-related 1 protein, C-terminal region 1 [IPR032172] 0.6255490483162554 0.3004310714055593 0.7638483661291509 1.0 0.9927260849866868 2 P51116 1
|
| 108 |
+
Zinc finger, CCHC-type [IPR001878] 0.4006527465061794 0.2583369731620329 0.7961468539665946 1.0 0.9927260849866868 7 Q9NUD5 1
|
| 109 |
+
Jumonji, helical domain [IPR041070] 0.5929721815519818 0.229611240852819 0.8183938712972898 1.0 0.9927260849866868 2 Q9UPP1 1
|
| 110 |
+
Mad3/Bub1 homology region 1 [IPR013212] 0.5900439238653058 0.2238274708749305 0.8228915535421024 1.0 0.9927260849866868 2 O43683 1
|
| 111 |
+
PTB/PI domain [IPR006020] 0.4448919809593555 0.1910749658468593 0.8484668606344075 1.0 0.9927260849866868 3 O60343,Q9UKG1 2
|
| 112 |
+
PABP, RNA recognition motif 2 [IPR045305] 0.5673499267935624 0.1823505088006823 0.8553076627954521 1.0 0.9927260849866868 2 Q13310 1
|
| 113 |
+
SET domain [IPR001214] 0.390109890109892 0.1808032486683862 0.8565220130692048 1.0 0.9927260849866868 4 O96028,Q9H7B4,Q9BYW2 3
|
| 114 |
+
Agenet-like domain [IPR008395] 0.437934822409374 0.1769762220789586 0.859527066781661 1.0 0.9927260849866868 3 P51114,P51116 2
|
| 115 |
+
Fxr1, tudor domain [IPR041560] 0.437934822409374 0.1769762220789586 0.859527066781661 1.0 0.9927260849866868 3 P51114,P51116 2
|
| 116 |
+
Fragile X-related 1 protein, C-terminal core [IPR022034] 0.437934822409374 0.1769762220789586 0.859527066781661 1.0 0.9927260849866868 3 P51114,P51116 2
|
| 117 |
+
Synaptic functional regulator FMRP, KH0 domain [IPR040472] 0.437934822409374 0.1769762220789586 0.859527066781661 1.0 0.9927260849866868 3 P51114,P51116 2
|
| 118 |
+
Thioesterase domain [IPR006683] 0.5611273792093733 0.172019974120363 0.8634218259888233 1.0 0.9927260849866868 2 O00154 1
|
| 119 |
+
Exoribonuclease, phosphorolytic domain 1 [IPR001247] 0.3702346041055722 0.1679118870176227 0.8666525984178235 1.0 0.9927260849866868 6 Q15024,Q96B26,Q9NPD3,Q8TCS8,Q5RKV6 5
|
| 120 |
+
CARG-binding factor, N-terminal [IPR012956] 0.554538799414356 0.1615708447251024 0.8716438181391772 1.0 0.9927260849866868 2 Q99729 1
|
| 121 |
+
Alpha-D-phosphohexomutase, alpha/beta/alpha domain I [IPR005844] 0.5516105417276737 0.1570878153320707 0.875175640316199 1.0 0.9927260849866868 2 P36871 1
|
| 122 |
+
Alpha-D-phosphohexomutase, alpha/beta/alpha domain III [IPR005846] 0.5516105417276737 0.1570878153320707 0.875175640316199 1.0 0.9927260849866868 2 P36871 1
|
| 123 |
+
Alpha-D-phosphohexomutase, alpha/beta/alpha domain II [IPR005845] 0.5516105417276737 0.1570878153320707 0.875175640316199 1.0 0.9927260849866868 2 P36871 1
|
| 124 |
+
HDGF-related, PWWP domain [IPR035496] 0.4247528377883561 0.1520529856215294 0.8791451449775125 1.0 0.9927260849866868 3 Q7Z4V5,P51858 2
|
| 125 |
+
Ubiquitin carboxyl-terminal hydrolase, C-terminal [IPR029346] 0.423565319244632 0.1499235585990255 0.8808249247106361 1.0 0.9927260849866868 3 Q9Y4E8 1
|
| 126 |
+
Exoribonuclease, phosphorolytic domain 2 [IPR015847] 0.37009893733968 0.1439467341845385 0.8855425314062226 1.0 0.9927260849866868 5 Q15024,Q9NPD3,Q96B26,Q8TCS8 4
|
| 127 |
+
Ribosomal protein L11, C-terminal [IPR020783] 0.5424597364568077 0.1437134498162438 0.8857267500385932 1.0 0.9927260849866868 2 Q9Y3B7 1
|
| 128 |
+
Ribosomal protein L11, N-terminal [IPR020784] 0.5424597364568077 0.1437134498162438 0.8857267500385932 1.0 0.9927260849866868 2 Q9Y3B7 1
|
| 129 |
+
Pyrroline-5-carboxylate reductase, dimerisation domain [IPR029036] 0.5395314787701394 0.1396356269714377 0.8889478901234504 1.0 0.9927260849866868 2 P32322 1
|
| 130 |
+
Pyrroline-5-carboxylate reductase, catalytic, N-terminal [IPR028939] 0.5395314787701394 0.1396356269714377 0.8889478901234504 1.0 0.9927260849866868 2 P32322 1
|
| 131 |
+
Sec23/Sec24, helical domain [IPR006900] 0.3617905328055916 0.1225586400593158 0.9024566079040924 1.0 0.9927260849866868 5 Q15437,O95487 2
|
| 132 |
+
Sec23/Sec24 beta-sandwich [IPR012990] 0.3617905328055916 0.1225586400593158 0.9024566079040924 1.0 0.9927260849866868 5 Q15437,O95487 2
|
| 133 |
+
Sec23/Sec24, trunk domain [IPR006896] 0.3617905328055916 0.1225586400593158 0.9024566079040924 1.0 0.9927260849866868 5 Q15437,O95487 2
|
| 134 |
+
Zinc finger, Sec23/Sec24-type [IPR006895] 0.3617905328055916 0.1225586400593158 0.9024566079040924 1.0 0.9927260849866868 5 Q15437,O95487 2
|
| 135 |
+
Glycosyltransferase 2-like [IPR001173] 0.5252562225475822 0.1211377253774756 0.9035819486567522 1.0 0.9927260849866868 2 Q10471 1
|
| 136 |
+
N-acetylgalactosaminyltransferase [IPR045885] 0.5252562225475822 0.1211377253774756 0.9035819486567522 1.0 0.9927260849866868 2 Q10471 1
|
| 137 |
+
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [IPR006139] 0.3615055355471857 0.1178067129187128 0.9062208104506424 1.0 0.9927260849866868 4 Q9UBQ7,Q13363 2
|
| 138 |
+
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain [IPR006140] 0.3615055355471857 0.1178067129187128 0.9062208104506424 1.0 0.9927260849866868 4 Q9UBQ7,Q13363 2
|
| 139 |
+
Heat shock protein Hsp90, N-terminal [IPR020575] 0.3611721611721631 0.1171478044719784 0.9067429280108464 1.0 0.9927260849866868 4 P07900,P14625,P08238 3
|
| 140 |
+
Macro domain [IPR002589] 0.5193997071742361 0.1142007952971579 0.9090786214789894 1.0 0.9927260849866868 2 Q9P0M6 1
|
| 141 |
+
Core histone macro-H2A, macro domain [IPR035796] 0.5193997071742361 0.1142007952971579 0.9090786214789894 1.0 0.9927260849866868 2 Q9P0M6 1
|
| 142 |
+
Peptidase C19, ubiquitin-specific peptidase, DUSP domain [IPR006615] 0.3990700749960251 0.1102746131344507 0.912191590238363 1.0 0.9927260849866868 3 Q9Y4E8 1
|
| 143 |
+
Survival motor neuron [IPR010304] 0.5051244509516833 0.0988298578441352 0.9212733614074458 1.0 0.9927260849866868 2 O75940 1
|
| 144 |
+
Exonuclease, RNase T/DNA polymerase III [IPR013520] 0.5000000000000043 0.0938283885280244 0.9252454803748592 1.0 0.9927260849866868 2 Q9GZR2 1
|
| 145 |
+
Intermediate filament head, DNA-binding domain [IPR006821] 0.3483516483516502 0.0931462407026615 0.9257873823222642 1.0 0.9927260849866868 4 Q16352,P08670,P07196 3
|
| 146 |
+
Gelsolin-like domain [IPR007123] 0.3409136996581103 0.0807921850202363 0.9356072232035588 1.0 0.9927260849866868 6 Q15437,O95487 2
|
| 147 |
+
Domain of unknown function DUF4749 [IPR031847] 0.4849926793557811 0.0806752836082108 0.9357001935536582 1.0 0.9927260849866868 2 Q96HC4 1
|
| 148 |
+
Beta-adaptin appendage, C-terminal subdomain [IPR015151] 0.361772244599048 0.0651240821062629 0.9480752063815504 1.0 0.9927260849866868 3 Q10567,O00203 2
|
| 149 |
+
COP9 signalosome complex subunit 7, helix I [IPR041481] 0.4597364568081939 0.0631780982004104 0.9496246850360106 1.0 0.9927260849866868 2 Q9H9Q2 1
|
| 150 |
+
Zinc finger, TFIIB-type [IPR013137] 0.4516837481698496 0.0587019063123306 0.9531895409408212 1.0 0.9927260849866868 2 P29083 1
|
| 151 |
+
Tyrosine-specific protein phosphatases domain [IPR000387] 0.3511534236543391 0.055402185108471 0.9558180550484026 1.0 0.9927260849866868 3 P18031,Q99956 2
|
| 152 |
+
Exportin-1/Importin-beta-like [IPR013598] 0.3241758241758259 0.0549599111126268 0.9561704017911324 1.0 0.9927260849866868 4 O43592,O14980,Q9HAV4 3
|
| 153 |
+
Immunoglobulin I-set [IPR013098] 0.4322840409956027 0.0498250181920691 0.9602618298054304 1.0 0.9927260849866868 2 Q13308 1
|
| 154 |
+
Adenylate kinase, active site lid domain [IPR007862] 0.4205710102488977 0.0456220175047014 0.9636115200105212 1.0 0.9927260849866868 2 P27144 1
|
| 155 |
+
SKP1 component, POZ domain [IPR016073] 0.4176427525622199 0.0446922328267024 0.9643526248201132 1.0 0.9927260849866868 2 P63208 1
|
| 156 |
+
AWS domain [IPR006560] 0.4154465592972161 0.044024712244461 0.9648847054386164 1.0 0.9927260849866868 2 O96028 1
|
| 157 |
+
Post-SET domain [IPR003616] 0.4154465592972161 0.044024712244461 0.9648847054386164 1.0 0.9927260849866868 2 O96028 1
|
| 158 |
+
Serine hydroxymethyltransferase-like domain [IPR039429] 0.378477306002923 0.0360303285574895 0.9712581759566056 1.0 0.9927260849866868 2 P34897 1
|
| 159 |
+
Rhodanese-like domain [IPR001763] 0.3770131771595873 0.0358186213596432 0.9714269848960106 1.0 0.9927260849866868 2 Q99956 1
|
| 160 |
+
Nucleotidyl transferase domain [IPR005835] 0.3221438692995904 0.0350314952325576 0.9720546267156756 1.0 0.9927260849866868 3 Q9Y5P6 1
|
| 161 |
+
Zinc finger, RanBP2-type [IPR001876] 0.3298832229331579 0.0333225507341377 0.9734173708585176 1.0 0.9927260849866868 8 Q92804,Q01844,P35637 3
|
| 162 |
+
Dual specificity phosphatase, catalytic domain [IPR000340] 0.351024890190337 0.0330122524640243 0.9736648169142554 1.0 0.9927260849866868 2 Q99956 1
|
| 163 |
+
Dual specificity protein phosphatase domain [IPR020422] 0.351024890190337 0.0330122524640243 0.9736648169142554 1.0 0.9927260849866868 2 Q99956 1
|
| 164 |
+
PPM-type phosphatase domain [IPR001932] 0.3491947291361644 0.0328719228341991 0.973776723023549 1.0 0.9927260849866868 2 Q9H0C8 1
|
| 165 |
+
Potassium channel tetramerisation-type BTB domain [IPR003131] 0.3385797950219548 0.0321743480520457 0.974333012874146 1.0 0.9927260849866868 2 Q96CX2 1
|
| 166 |
+
RuvB-like, AAA-lid domain [IPR041048] 0.3378477306002841 0.0321329370974366 0.9743660369599748 1.0 0.9927260849866868 2 Q9Y265 1
|
| 167 |
+
TIP49, P-loop domain [IPR010339] 0.3378477306002841 0.0321329370974366 0.9743660369599748 1.0 0.9927260849866868 2 Q9Y265 1
|
| 168 |
+
Peptidase S9, prolyl oligopeptidase, catalytic domain [IPR001375] 0.3012070491674965 0.0269606201199337 0.9784911431967098 1.0 0.9927850711187094 4 Q86TI2 1
|
interpro_domain/selections.json
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interpro_family/advanced/idx2term.json
ADDED
|
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| 1 |
+
{}
|
interpro_family/basic/idx2term.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"0": "Mitochondrial carrier protein [IPR002067]", "1": "14-3-3 protein [IPR000308]", "2": "Tubulin [IPR000217]", "3": "Beta tubulin [IPR002453]", "4": "Short-chain dehydrogenase/reductase SDR [IPR002347]"}
|
interpro_family/basic/plot_0.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_1.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_2.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_3.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_4.png
ADDED
|
Git LFS Details
|
interpro_family/consensus.joblib
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
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|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:275fa525145975decd116484adcb5d0c862a469d14816cf05dd2dd2bcde8ac39
|
| 3 |
+
size 109634
|
interpro_family/df_merge.tsv
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
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|
|
|
| 1 |
+
term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
| 2 |
+
Proteasome B-type subunit [IPR023333] 3 7 1.979754489185152 0.0477311225269367 3.699029126213592 6.970873786407767 1.6670727234653664 0.1509307531330224 1.4503762582219135 0.1681602725795027 0.9611878160538336 0.233503072382129 0.0133191340898047 0.0432957136582515 0.0032139762811053 0.0189506401306209 0.0005732271800539
|
interpro_family/metrics.json
ADDED
|
@@ -0,0 +1,7 @@
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|
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|
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|
|
|
| 1 |
+
{
|
| 2 |
+
"type_of_task": "ranksum",
|
| 3 |
+
"signature_size": 2734,
|
| 4 |
+
"annotations_size": 2150,
|
| 5 |
+
"title": "Average number of proteins per term",
|
| 6 |
+
"value": 1.2758139534883721
|
| 7 |
+
}
|