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- interpro_active_site/advanced/idx2term.json +1 -0
- interpro_active_site/basic/idx2term.json +1 -0
- interpro_active_site/basic/plot_0.png +3 -0
- interpro_active_site/consensus.joblib +3 -0
- interpro_active_site/df_merge.tsv +1 -0
- interpro_active_site/metrics.json +7 -0
- interpro_active_site/paths.json +1 -0
- interpro_active_site/result.tsv +6 -0
- interpro_active_site/selections.json +1 -0
- interpro_binding_site/advanced/idx2term.json +1 -0
- interpro_binding_site/basic/idx2term.json +1 -0
- interpro_binding_site/consensus.joblib +3 -0
- interpro_binding_site/df_merge.tsv +1 -0
- interpro_binding_site/metrics.json +7 -0
- interpro_binding_site/paths.json +1 -0
- interpro_binding_site/result.tsv +3 -0
- interpro_binding_site/selections.json +1 -0
- interpro_conserved_site/advanced/idx2term.json +1 -0
- interpro_conserved_site/basic/idx2term.json +1 -0
- interpro_conserved_site/basic/plot_0.png +3 -0
- interpro_conserved_site/consensus.joblib +3 -0
- interpro_conserved_site/df_merge.tsv +1 -0
- interpro_conserved_site/metrics.json +7 -0
- interpro_conserved_site/paths.json +1 -0
- interpro_conserved_site/result.tsv +34 -0
- interpro_conserved_site/selections.json +1 -0
- interpro_domain/advanced/idx2term.json +1 -0
- interpro_domain/advanced/plot_0.png +3 -0
- interpro_domain/basic/idx2term.json +1 -0
- interpro_domain/basic/plot_0.png +3 -0
- interpro_domain/basic/plot_1.png +3 -0
- interpro_domain/basic/plot_2.png +3 -0
- interpro_domain/basic/plot_3.png +3 -0
- interpro_domain/basic/plot_4.png +3 -0
- interpro_domain/basic/plot_5.png +3 -0
- interpro_domain/basic/plot_6.png +3 -0
- interpro_domain/basic/plot_7.png +3 -0
- interpro_domain/consensus.joblib +3 -0
- interpro_domain/df_merge.tsv +2 -0
- interpro_domain/metrics.json +7 -0
- interpro_domain/paths.json +1 -0
- interpro_domain/result.tsv +179 -0
- interpro_domain/selections.json +0 -0
- interpro_family/advanced/idx2term.json +1 -0
- interpro_family/basic/idx2term.json +1 -0
- interpro_family/basic/plot_0.png +3 -0
- interpro_family/basic/plot_1.png +3 -0
- interpro_family/consensus.joblib +3 -0
- interpro_family/df_merge.tsv +1 -0
- interpro_family/metrics.json +7 -0
interpro_active_site/advanced/idx2term.json
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{}
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interpro_active_site/basic/idx2term.json
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{"0": "Ubiquitin-conjugating enzyme, active site [IPR023313]"}
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interpro_active_site/basic/plot_0.png
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Git LFS Details
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interpro_active_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:586cdf65a8b64d4f101710d8735a42728f7bf944b3c68461d46e1d0c9feb9619
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size 68213
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interpro_active_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_active_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2734,
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"annotations_size": 55,
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"title": "Average number of proteins per term",
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"value": 2.4
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}
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interpro_active_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C164/C164_val_log2fc"}
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interpro_active_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Serine carboxypeptidase, serine active site [IPR018202] 0.9805931893079456 1.4269241245663582 0.1536017662778532 0.9998961010492006 0.3249268132800742 3 Q9HB40,P10619 2
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Nucleoside diphosphate kinase, active site [IPR023005] 0.7785505124450929 0.8175505601607241 0.4136138678585586 0.999999999999822 0.63191007589502 2 P15531 1
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Ubiquitin-conjugating enzyme, active site [IPR023313] 0.424120234604106 0.3144103208666081 0.7532094184044988 1.0 0.9005098462814389 6 P61088,P68036,P61081,P61086,Q16763 5
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Peptidase family C14A, cysteine active site [IPR033139] 0.4668538911855519 0.2929941857046278 0.7695265959132296 1.0 0.9005098462814389 4 P55212,P55210 2
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Peptidase family C14A, His active site [IPR016129] 0.4668538911855519 0.2929941857046278 0.7695265959132296 1.0 0.9005098462814389 4 P55212,P55210 2
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interpro_active_site/selections.json
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{"all_annotations": ["ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-CoA lyase, active site [IPR000138]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Peptidase family C14A, His active site [IPR016129]", "Peptidase family C14A, cysteine active site [IPR033139]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]", "Uracil-DNA glycosylase, active site [IPR018085]"], "available_proteins": ["ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "AKT2", "APEH", "ATP5A1", "ATP5B", "ATP6V1A", "ATP6V1B2", "AURKA", "BLMH", "BUB1", "CAMK2G", "CAPN1", "CASP3", "CASP6", "CASP7", "CASP8", "CDK1", "CDK12", "CDK2", "CDK4", "CDK6", "CHEK2", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "FASN", "FECH", "G6PD", "GAA", "GANAB", "GAPDH", "GART", "GLUD1", "GSK3A", "GSK3B", "GSR", "GUSB", "HADHB", "HMGCL", "HMGCS1", "LDHA", "LDHB", "LONP1", "MAP2K1", "MAP2K2", "MAP2K3", "MAPK1", "MASTL", "MDH1", "MDH2", "NEK9", "NME1", "NME2", "PAK1", "PAK2", "PASK", "PBK", "PGAM1", "PKM", "PKMYT1", "PKN1", "PKN2", "PLK1", "PREP", "PRKACA", "PRPF4B", "PTK7", "PTPN1", "RIPK1", "RNASET2", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SUCLG1", "TALDO1", "TIGAR", "TOP1", "TPI1", "TPP2", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2G2", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "UMPS", "UNG", "VRK1", "WNK1"], "leading_proteins": ["CASP6", "CASP7", "CTSA", "NME1", "SCPEP1", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S"]}
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interpro_binding_site/advanced/idx2term.json
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{}
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interpro_binding_site/basic/idx2term.json
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{}
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interpro_binding_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:c2e665b43d9fee8fd3baa05f7fc3abd30d1b73f5c15cfeee1c935527d1edc7ce
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size 61872
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interpro_binding_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_binding_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2734,
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"annotations_size": 31,
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"title": "Average number of proteins per term",
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"value": 4.032258064516129
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}
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interpro_binding_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C164/C164_val_log2fc"}
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interpro_binding_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Peptidase M16, zinc-binding site [IPR001431] 0.7127238955847729 1.2702510632602464 0.2039952137455607 0.9991520191360084 0.5366044708888285 5 Q10713 1
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PPM-type phosphatase, divalent cation binding [IPR000222] 0.403001464128845 0.0697551308737227 0.9443885605141856 1.0 0.9443885605141856 2 Q9H0C8 1
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interpro_binding_site/selections.json
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{"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Adrenodoxin, iron-sulphur binding site [IPR018298]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT2", "APEX1", "AURKA", "BPNT1", "BUB1", "CALM3", "CALU", "CAMK2G", "CAPN1", "CAPNS1", "CDK1", "CDK12", "CDK2", "CDK4", "CDK6", "CETN2", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DCTD", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "EPS15", "EPS15L1", "FDX1", "FKBP10", "FKBP14", "FKBP7", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3A", "GSK3B", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "LETM1", "MACF1", "MAP2K1", "MAP2K2", "MAP2K3", "MAPK1", "MAPK14", "MCCC1", "MICU1", "MYH10", "MYH14", "MYH9", "MYO1B", "MYO1D", "NFS1", "NRDC", "NUCB1", "NUCB2", "PA2G4", "PAK1", "PAK2", "PASK", "PC", "PCCA", "PDCD6", "PEF1", "PGD", "PKMYT1", "PKN1", "PKN2", "PLCG1", "PLK1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1G", "PRKACA", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "STK4", "TKT", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UQCRC2", "VRK1"], "leading_proteins": ["ILKAP", "PMPCA"]}
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interpro_conserved_site/advanced/idx2term.json
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{}
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interpro_conserved_site/basic/idx2term.json
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{"0": "14-3-3 protein, conserved site [IPR023409]"}
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interpro_conserved_site/basic/plot_0.png
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Git LFS Details
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interpro_conserved_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:6019848e4965b234368a80e0c97b4b2fe8c4c049bc9f7f27bb95ca022c0abee1
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size 86850
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interpro_conserved_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_conserved_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2734,
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"annotations_size": 264,
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"title": "Average number of proteins per term",
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"value": 2.496212121212121
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}
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interpro_conserved_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C164/C164_val_log2fc"}
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interpro_conserved_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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C-type lectin, conserved site [IPR018378] 0.9831625183016108 1.5847911871509248 0.1130137853833201 0.9999999999999822 0.3556974644679543 2 Q5KU26 1
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Tetraspanin, conserved site [IPR018503] 0.9806002928257695 1.5749726492484908 0.1152627578723368 0.9999999999999908 0.3556974644679543 2 O60637 1
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Glycoside hydrolase, family 29, conserved site [IPR018526] 0.9787701317715968 1.5679589068071536 0.1168907228323383 0.9999999999999944 0.3556974644679543 2 Q9BTY2 1
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Lysosome-associated membrane glycoprotein, conserved site [IPR018134] 0.978404099560762 1.5665561142164548 0.1172184826087576 0.9999999999999948 0.3556974644679543 2 P13473 1
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EGF-like calcium-binding, conserved site [IPR018097] 0.9685212298682286 1.5286771324345725 0.1263445039869308 0.9999999999999996 0.3625537940494537 2 P01130 1
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Sterol reductase, conserved site [IPR018083] 0.9648609077598834 1.5146472735962362 0.1298617536502528 1.0 0.368639816813621 2 Q14739 1
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Immunoglobulin/major histocompatibility complex, conserved site [IPR003006] 0.9494875549048328 1.4557331575011283 0.1454664000381975 1.0 0.3879104001018601 2 P01889 1
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| 9 |
+
Chromo domain, conserved site [IPR023779] 0.7509992239327898 1.4160367280876267 0.1567647513370871 1.0 0.4018047995436019 5 Q13185,P83916,O14646 3
|
| 10 |
+
Guanylate kinase, conserved site [IPR020590] 0.7827838827838836 1.3361824936600029 0.181489631653561 1.0 0.4409551270390903 4 Q14168,Q00013,O14936 3
|
| 11 |
+
Proteasome beta-type subunit, conserved site [IPR016050] 0.6518444632256541 1.2694370153720549 0.2042852412951779 1.0 0.4457132537349336 8 P28072,P20618,P49721 3
|
| 12 |
+
Sugar transporter, conserved site [IPR005829] 0.8931185944363136 1.2405002673175711 0.2147904153819653 1.0 0.4610135744783646 2 Q7L0J3 1
|
| 13 |
+
Mitogen-activated protein (MAP) kinase, conserved site [IPR003527] 0.7635431918008783 0.7650541595177581 0.4442392949112772 1.0 0.6324560963880743 2 Q16539 1
|
| 14 |
+
Dynein light chain, type 1/2, conserved site [IPR019763] 0.7602489019033756 0.7536628235623754 0.4510517104468285 1.0 0.6367788853366991 2 Q96FJ2 1
|
| 15 |
+
Dynamin, GTPase region, conserved site [IPR019762] 0.741581259150804 0.6901065189049175 0.4901272039787931 1.0 0.6774533081172848 2 P50570 1
|
| 16 |
+
Aldehyde dehydrogenase, cysteine active site [IPR016160] 0.5114689404009695 0.5934640738578597 0.5528706192376516 1.0 0.7446828748915307 6 P05091 1
|
| 17 |
+
DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514] 0.7024158125915063 0.563189685624939 0.5733057256329737 1.0 0.7509881639701896 2 O15160 1
|
| 18 |
+
Syntaxin/epimorphin, conserved site [IPR006012] 0.5545633848526663 0.5343231021282834 0.5931180114028309 1.0 0.7601124029628513 4 Q13190,O15400 2
|
| 19 |
+
HMG box A DNA-binding domain, conserved site [IPR017967] 0.6752105455876969 0.4559494396419572 0.6484263364242813 1.0 0.8017423035874063 3 O15347,P26583 2
|
| 20 |
+
Ubiquitin-activating enzyme E1, conserved site [IPR018074] 0.640190336749636 0.3848945650109086 0.7003155327871526 1.0 0.8332059135006635 2 P22314 1
|
| 21 |
+
Fructose-bisphosphate aldolase class-I active site [IPR029768] 0.6336017569546151 0.3680497237288266 0.7128361581936051 1.0 0.8402556623372289 2 P04075 1
|
| 22 |
+
GTP1/OBG, conserved site [IPR006074] 0.5918740849194783 0.2718461170709923 0.7857403437069566 1.0 0.8855623073505953 2 Q9Y295 1
|
| 23 |
+
Ribosomal protein S2, conserved site [IPR018130] 0.560029282576874 0.2114510596794125 0.8325353174608932 1.0 0.9196206017141246 2 P08865 1
|
| 24 |
+
Serpin, conserved site [IPR023795] 0.5380673499268019 0.1766263603059184 0.85980188708356 1.0 0.9418576688384226 2 P50454 1
|
| 25 |
+
Ribosomal protein L30, conserved site [IPR018038] 0.5204978038067434 0.1527461754363896 0.8785984452669202 1.0 0.9572438513091414 2 Q6DKI1 1
|
| 26 |
+
Adenylate kinase, conserved site [IPR033690] 0.3835164835164855 0.1383885979029145 0.8899333078668932 1.0 0.9572438513091414 4 P30085,P54819,P27144 3
|
| 27 |
+
Histidine triad, conserved site [IPR019808] 0.5040263543191789 0.1334708726824937 0.8938209983759553 1.0 0.9572438513091414 2 Q96C86 1
|
| 28 |
+
Profilin conserved site [IPR027310] 0.4981698389458305 0.1273174108781235 0.898689180557988 1.0 0.9572438513091414 2 P35080 1
|
| 29 |
+
14-3-3 protein, conserved site [IPR023409] 0.3222140762463349 0.0977583243819441 0.9221242011374996 1.0 0.9776738518084332 6 P63104,P27348,P62258,Q04917,P31946 5
|
| 30 |
+
Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364] 0.3304029304029325 0.0826862786162157 0.9341009955859004 1.0 0.9864106513387106 4 Q8N4Q0,Q99536,Q08257 3
|
| 31 |
+
Alcohol dehydrogenase, zinc-type, conserved site [IPR002328] 0.4062957540263492 0.0706969932156271 0.943638913917756 1.0 0.9880519267865748 2 Q00796 1
|
| 32 |
+
RNA polymerase, beta subunit, conserved site [IPR007121] 0.3806734992679331 0.0646764934229353 0.9484315791582224 1.0 0.9880519267865748 2 Q9H9Y6 1
|
| 33 |
+
Phosphatidylinositol 3/4-kinase, conserved site [IPR018936] 0.2967032967032987 0.0622535382198463 0.9503609277969643 1.0 0.9880519267865748 4 Q8NEB9,Q9UBF8,P42345 3
|
| 34 |
+
Zinc finger, PHD-type, conserved site [IPR019786] 0.3046414497812623 0.0525242675535742 0.9581109593081938 1.0 0.9880519267865748 12 Q9BTC0,Q14839,Q9UPP1 3
|
interpro_conserved_site/selections.json
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{"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "CBX family C-terminal motif [IPR033773]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Fork head domain conserved site 2 [IPR030456]", "Fork head domain conserved site1 [IPR018122]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site [IPR017958]", "Glutathione peroxidase conserved site [IPR029760]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Helix-turn-helix motif [IPR000047]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "Homeobox, conserved site [IPR017970]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Low-density lipoprotein (LDL) receptor class A, conserved site [IPR023415]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Molybdenum cofactor biosynthesis, conserved site [IPR008284]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase TruD, conserved site [IPR020119]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "RNA polymerase, subunit H/Rpb5, conserved site [IPR020608]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Rel homology domain, conserved site [IPR030492]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Transcription factor TFIIB, conserved site [IPR023486]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "ABCB1", "ABCB10", "ABCB7", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ACAA2", "ACAD9", "ACADM", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACBD5", "ACIN1", "ACLY", "ACSL1", "ACSL3", "ACSL4", "ACTN1", "ACTN2", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK4", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA6", "ANXA7", "AP1M1", "AP2M1", "AP2S1", "AP3M1", "APEX1", "APP", "ATAD1", "ATP5C1", "ATP5O", "BAG6", "BAK1", "BAZ1A", "BAZ1B", "BCS1L", "BDH2", "BOP1", "BPNT1", "BPTF", "BRD4", "BUD31", "CAD", "CALR", "CANX", "CAP1", "CAPZA1", "CAPZB", "CASK", "CBR1", "CBX1", "CBX3", "CBX5", "CBX8", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDX2", "CETN2", "CHAF1B", "CHD1", "CHD4", "CLGN", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "CORO1B", "CORO1C", "CPOX", "CRYZ", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4A", "CUL4B", "CUL5", "CYP51A1", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX55", "DDX6", "DHCR7", "DHFR", "DHRS7B", "DHX15", "DHX16", "DHX30", "DHX36", "DHX38", "DHX8", "DHX9", "DIDO1", "DIS3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNMT1", "DRG1", "DRG2", "DSG2", "DST", "DTL", "DTYMK", "DYNLL1", "DYNLL2", "EARS2", "ECH1", "ECHDC1", "ECHS1", "ECI1", "ECI2", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A2", "EIF4A3", "EIF4E", "ENO1", "EPB41", "EPB41L2", "EPB41L3", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FOXC1", "FUCA1", "FUCA2", "GAA", "GALK1", "GANAB", "GART", "GATB", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPA", "GMPPB", "GNPDA1", "GNS", "GPHN", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF2B", "GTF3C2", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HGS", "HIBADH", "HINT2", "HLA-A", "HLA-B", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA14", "HSPA1B", "HSPA2", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "ILVBL", "IMPDH1", "IMPDH2", "INA", "IQGAP1", "IVD", "KDM2A", "KDSR", "KIF11", "KIF20A", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF3A", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LAMP2", "LARS", "LARS2", "LBR", "LDLR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LSS", "MACF1", "MAPK1", "MAPK14", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME2", "MGST2", "MID1", "MIF", "MPI", "MPP1", "MPP2", "MPP6", "MPST", "MRC2", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFS8", "NDUFV1", "NEFL", "NEFM", "NES", "NFKB1", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NSD2", "NSF", "NUBP2", "NUBPL", "NUDT1", "NUDT5", "NUP153", "NUP37", "NVL", "OSBP", "OSBPL11", "OSBPL6", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PHF8", "PHGDH", "PI4KB", "PIK3C3", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLOD3", "PLRG1", "PLS3", "PNP", "POLA1", "POLD1", "POLR1B", "POLR1C", "POLR2B", "POLR2C", "POLR2E", "PPIB", "PPID", "PPIE", "PPIF", "PPIH", "PPIL1", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS2", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PUS7", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RCL1", "RDH13", "RDX", "RIDA", "RNF14", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS28", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RSF1", "RTN4IP1", "S100A10", "S100A11", "SART1", "SBDS", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC27A4", "SLC2A1", "SLIT2", "SMARCA4", "SMU1", "SNRNP40", "SNU13", "SORD", "SPATA5L1", "SPTBN1", "SPTBN2", "SRM", "STAM", "STMN1", "STOM", "STRN", "STX12", "STX18", "STX5", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SV2A", "SYNE2", "TBL3", "TCP1", "THOC6", "TK1", "TLN1", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM21", "TRIM24", "TRIM25", "TRIM27", "TRIM28", "TRIM33", "TRIM35", "TRIP13", "TSFM", "TSPAN3", "TSPAN6", "TTF2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UBFD1", "UHRF1", "USP10", "USP11", "USP14", "USP15", "USP47", "USP48", "USP5", "USP7", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "VPS4B", "WARS", "WDHD1", "WDR1", "WDR18", "WDR3", "WDR36", "WDR41", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2"], "leading_proteins": ["AK2", "AK4", "ALDH2", "ALDOA", "CASK", "CBX1", "CBX3", "CHD1", "CHD4", "CMPK1", "COLEC12", "CRYZ", "DCPS", "DIDO1", "DNM2", "DRG1", "DYNLL2", "FUCA2", "HLA-B", "HMGB2", "HMGB3", "LAMP2", "LBR", "LDLR", "MAPK14", "MPP1", "MPP2", "MTOR", "PFN2", "PHF8", "PI4KB", "PIK3C3", "POLR1B", "POLR1C", "PSMB1", "PSMB2", "PSMB6", "RPL7L1", "RPSA", "SERPINH1", "SORD", "STX5", "STX7", "SV2A", "TSPAN3", "UBA1", "VAT1", "YWHAB", "YWHAE", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2"]}
|
interpro_domain/advanced/idx2term.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"0": "Immunoglobulin-like domain [IPR007110]"}
|
interpro_domain/advanced/plot_0.png
ADDED
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Git LFS Details
|
interpro_domain/basic/idx2term.json
ADDED
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| 1 |
+
{"0": "Immunoglobulin-like domain [IPR007110]", "1": "Phosphoribosyltransferase domain [IPR000836]", "2": "Zinc finger, PHD-type [IPR001965]", "3": "Alcohol dehydrogenase, N-terminal [IPR013154]", "4": "14-3-3 domain [IPR023410]", "5": "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) [IPR002314]", "6": "Aminoacyl-tRNA synthetase, class II [IPR006195]", "7": "CS domain [IPR007052]"}
|
interpro_domain/basic/plot_0.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_1.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_2.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_3.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_4.png
ADDED
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Git LFS Details
|
interpro_domain/basic/plot_5.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_6.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_7.png
ADDED
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Git LFS Details
|
interpro_domain/consensus.joblib
ADDED
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version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:cd40db9dfc62f97d206e4201feb2f12893980e37a3b39feda9b6f638d41363bf
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| 3 |
+
size 281984
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interpro_domain/df_merge.tsv
ADDED
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| 1 |
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
| 2 |
+
Immunoglobulin-like domain [IPR007110] 6 8 2.2435037133204445 0.0248643506744319 4.480582524271845 12.427184466019416 0.4075261998509777 0.4433674298264088 2.6479725987944898 3.173316973839475 1.1756568118942026 0.3233613924696422 1.0 1.0 0.3043925460154114 0.0582621706836755 0.3145553855505153
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interpro_domain/metrics.json
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| 1 |
+
{
|
| 2 |
+
"type_of_task": "ranksum",
|
| 3 |
+
"signature_size": 2734,
|
| 4 |
+
"annotations_size": 2335,
|
| 5 |
+
"title": "Average number of proteins per term",
|
| 6 |
+
"value": 2.091648822269807
|
| 7 |
+
}
|
interpro_domain/paths.json
ADDED
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| 1 |
+
{"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C164/C164_val_log2fc"}
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interpro_domain/result.tsv
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|
| 1 |
+
Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
|
| 2 |
+
Immunoglobulin-like domain [IPR007110] 0.892633001985749 2.2435037133204445 0.0248643506744319 1.0 0.1488673303199963 8 P35613,Q9Y624,Q08722,P04439,P10321,P01889 6
|
| 3 |
+
Peptidase S9, prolyl oligopeptidase, catalytic domain [IPR001375] 0.9049410010931548 1.7820605924446098 0.0747393512361673 1.0 0.2748289529707887 4 P48147 1
|
| 4 |
+
Immunoglobulin subtype 2 [IPR003598] 0.8700771503207784 1.6558088934229018 0.0977605261961356 1.0 0.3163486402802737 4 P35613,Q9Y624 2
|
| 5 |
+
Immunoglobulin subtype [IPR003599] 0.8700771503207784 1.6558088934229018 0.0977605261961356 1.0 0.3163486402802737 4 P35613,Q9Y624 2
|
| 6 |
+
Peptidase M16, N-terminal [IPR011765] 0.768325657494694 1.6207644751807553 0.1050681600133651 1.0 0.3228080968831679 7 Q10713,P31930,Q5JRX3 3
|
| 7 |
+
Peptidase M16, C-terminal [IPR007863] 0.768325657494694 1.6207644751807553 0.1050681600133651 1.0 0.3228080968831679 7 Q10713,P31930,Q5JRX3 3
|
| 8 |
+
PA domain [IPR003137] 0.989385065885798 1.6086319081118383 0.1076968528707957 1.0 0.3265872096796209 2 P02786 1
|
| 9 |
+
C-type lectin-like [IPR001304] 0.9831625183016108 1.5847911871509248 0.1130137853833201 1.0 0.3361620240382836 2 Q5KU26 1
|
| 10 |
+
CD209-like, C-type lectin-like domain [IPR033989] 0.9831625183016108 1.5847911871509248 0.1130137853833201 1.0 0.3361620240382836 2 Q5KU26 1
|
| 11 |
+
Ricin B, lectin domain [IPR000772] 0.8499430627297545 1.582449467775857 0.1135469994850479 1.0 0.3368897634022707 4 Q86SF2,Q9UBG0 2
|
| 12 |
+
JmjC domain [IPR003347] 0.8463308417753639 1.5692583026137146 0.1165877639955947 1.0 0.3407164317017695 4 Q9UPP1,Q8IUF8 2
|
| 13 |
+
Alpha-L-fucosidase, C-terminal [IPR031919] 0.9787701317715968 1.5679589068071536 0.1168907228323383 1.0 0.3407488611903996 2 Q9BTY2 1
|
| 14 |
+
Chromo domain [IPR023780] 0.7640121849563617 1.5604888089483595 0.1186444125383479 1.0 0.3428647317785177 6 Q13185,Q14839,P83916,O14646 4
|
| 15 |
+
Band 7 domain [IPR001107] 0.7144781069258397 1.5302774364961058 0.1259480708724338 1.0 0.3569038173387537 8 P27105,O75955,Q9UJZ1 3
|
| 16 |
+
EGF-like calcium-binding domain [IPR001881] 0.9685212298682286 1.5286771324345725 0.1263445039869308 1.0 0.3571603109073651 2 P01130 1
|
| 17 |
+
EGF-like domain [IPR000742] 0.9685212298682286 1.5286771324345725 0.1263445039869308 1.0 0.3571603109073651 2 P01130 1
|
| 18 |
+
Glycoside hydrolase family 20, catalytic domain [IPR015883] 0.9637628111273806 1.510438382895097 0.1309316008302143 1.0 0.364392476684804 2 P06865 1
|
| 19 |
+
Beta-hexosaminidase, eukaryotic type, N-terminal [IPR029019] 0.9637628111273806 1.510438382895097 0.1309316008302143 1.0 0.364392476684804 2 P06865 1
|
| 20 |
+
Peptidase S9A, N-terminal domain [IPR023302] 0.9626647144948765 1.5062295479709455 0.1320082566587357 1.0 0.365432071167469 2 P48147 1
|
| 21 |
+
Chromo/chromo shadow domain [IPR000953] 0.7006983131725237 1.4731907802392503 0.1406996004216196 1.0 0.3737583242144277 8 Q13185,Q14839,P83916,O14646 4
|
| 22 |
+
Guanylate kinase/L-type calcium channel beta subunit [IPR008145] 0.7607230056100182 1.4529898386394118 0.1462265753220255 1.0 0.3806157581633476 5 Q14168,Q00013,O14936 3
|
| 23 |
+
Guanylate kinase-like domain [IPR008144] 0.7607230056100182 1.4529898386394118 0.1462265753220255 1.0 0.3806157581633476 5 Q14168,Q00013,O14936 3
|
| 24 |
+
F-box domain [IPR001810] 0.8013687426869704 1.404486501000694 0.1601740286296065 1.0 0.4045302345935092 4 Q8NEZ5 1
|
| 25 |
+
Marvel domain [IPR008253] 0.931185944363106 1.385665246796862 0.1658491448380687 1.0 0.4149499872532602 2 Q16625 1
|
| 26 |
+
Target SNARE coiled-coil homology domain [IPR000727] 0.7183435912778278 1.3830869544885658 0.166638205237624 1.0 0.4149499872532602 6 Q9UEU0,O15400 2
|
| 27 |
+
HECT domain [IPR000569] 0.7095440592529557 1.348748438321419 0.1774177813681614 1.0 0.4253290754565266 6 Q05086,O95071 2
|
| 28 |
+
MHC class I alpha chain, alpha1 alpha2 domains [IPR001039] 0.9498352251922372 1.3218991141558518 0.1862017474522668 1.0 0.4339209921115431 3 P10321,P01889 2
|
| 29 |
+
MHC class I, alpha chain, C-terminal [IPR010579] 0.9498352251922372 1.3218991141558518 0.1862017474522668 1.0 0.4339209921115431 3 P10321,P01889 2
|
| 30 |
+
Immunoglobulin C1-set [IPR003597] 0.9498352251922372 1.3218991141558518 0.1862017474522668 1.0 0.4339209921115431 3 P10321,P01889 2
|
| 31 |
+
MHC class I-like antigen recognition-like [IPR011161] 0.9498352251922372 1.3218991141558518 0.1862017474522668 1.0 0.4339209921115431 3 P10321,P01889 2
|
| 32 |
+
Glycosyltransferase 2-like [IPR001173] 0.914348462664714 1.321331361019881 0.1863909015365643 1.0 0.4339209921115431 2 Q86SF2 1
|
| 33 |
+
N-acetylgalactosaminyltransferase [IPR045885] 0.914348462664714 1.321331361019881 0.1863909015365643 1.0 0.4339209921115431 2 Q86SF2 1
|
| 34 |
+
GMP phosphodiesterase, delta subunit [IPR008015] 0.9476382277554012 1.3144062760804638 0.1887095195532915 1.0 0.4375737121717336 3 O43924,A6NIH7 2
|
| 35 |
+
Fragile X-related 1 protein, C-terminal region 1 [IPR032172] 0.9055636896046874 1.287838089659702 0.1978023301687312 1.0 0.4465959398485719 2 P51114 1
|
| 36 |
+
K Homology domain [IPR004087] 0.5017612001507101 1.2330106910142524 0.2175717754886159 1.0 0.4673689933449109 21 P51114,Q06787,P51116,O75525 4
|
| 37 |
+
Peptidase M28 [IPR007484] 0.9155750188126828 1.2053174468728702 0.2280807768645361 1.0 0.4793674841188515 3 P02786 1
|
| 38 |
+
U2A'/phosphoprotein 32 family A, C-terminal [IPR003603] 0.7441885383067994 1.1943816855773437 0.2323286975767078 1.0 0.4849400755264898 4 Q92688 1
|
| 39 |
+
Fxr1, tudor domain [IPR041560] 0.9058952764555108 1.172516131456876 0.2409898994213879 1.0 0.4879764930855425 3 P51114,Q06787 2
|
| 40 |
+
Fragile X-related 1 protein, C-terminal core [IPR022034] 0.9058952764555108 1.172516131456876 0.2409898994213879 1.0 0.4879764930855425 3 P51114,Q06787 2
|
| 41 |
+
Synaptic functional regulator FMRP, KH0 domain [IPR040472] 0.9058952764555108 1.172516131456876 0.2409898994213879 1.0 0.4879764930855425 3 P51114,Q06787 2
|
| 42 |
+
Agenet-like domain [IPR008395] 0.9058952764555108 1.172516131456876 0.2409898994213879 1.0 0.4879764930855425 3 P51114,Q06787 2
|
| 43 |
+
CBS domain [IPR000644] 0.6500911394187969 1.1163849451699182 0.2642573948919438 1.0 0.5059248021923276 6 P51790 1
|
| 44 |
+
Jumonji, helical domain [IPR041070] 0.8594436310395359 1.1133136036370437 0.2655737659314081 1.0 0.5059248021923276 2 Q9UPP1 1
|
| 45 |
+
K Homology domain, type 1 [IPR004088] 0.481367886289302 1.1050899513693992 0.2691206143151847 1.0 0.5096485275149687 21 P51114,Q06787,P51116,O75525 4
|
| 46 |
+
Fibronectin type II domain [IPR000562] 0.8728357008642929 1.061190709910046 0.2886032404751613 1.0 0.5356824853016706 3 P11717 1
|
| 47 |
+
Survival motor neuron [IPR010304] 0.8396778916544724 1.0395081798342924 0.2985684558026735 1.0 0.5455822606701075 2 O75940 1
|
| 48 |
+
Tudor domain [IPR002999] 0.6303285590522176 1.0393949914229563 0.2986210724540183 1.0 0.5455822606701075 6 Q14739 1
|
| 49 |
+
Zinc finger, CCHC-type [IPR001878] 0.6121746584854965 1.002006832075411 0.3163402931465509 1.0 0.5642892165753982 7 Q9NUD5 1
|
| 50 |
+
Chromo shadow domain [IPR008251] 0.8513365067740754 0.9895755538934776 0.3223816236751053 1.0 0.5715725825978519 3 Q13185,P83916 2
|
| 51 |
+
Chromo domain subgroup [IPR017984] 0.8513365067740754 0.9895755538934776 0.3223816236751053 1.0 0.5715725825978519 3 Q13185,P83916 2
|
| 52 |
+
Domain of unknown function DUF5600 [IPR040990] 0.8188140556368989 0.9625250268042578 0.3357859378720769 1.0 0.5873109849672656 2 Q9H223 1
|
| 53 |
+
EH domain-containing protein, N-terminal [IPR031692] 0.8188140556368989 0.9625250268042578 0.3357859378720769 1.0 0.5873109849672656 2 Q9H223 1
|
| 54 |
+
Syntaxin, N-terminal domain [IPR006011] 0.8151537335285577 0.9491341293847444 0.3425523981070277 1.0 0.5937566536083922 2 O15400 1
|
| 55 |
+
TRAM/LAG1/CLN8 homology domain [IPR006634] 0.8346249693247143 0.934469372697494 0.3500618274488762 1.0 0.5990069697452386 3 Q96G23 1
|
| 56 |
+
Dynamin, N-terminal [IPR045063] 0.5883467589136 0.9081292640516232 0.3638099308463682 1.0 0.6097432546235036 7 P50570,Q9H4M9,Q9H223 3
|
| 57 |
+
Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.5883467589136 0.9081292640516232 0.3638099308463682 1.0 0.6097432546235036 7 P50570,Q9H4M9,Q9H223 3
|
| 58 |
+
Major facilitator superfamily domain [IPR020846] 0.8179622669961581 0.8801156629523816 0.3787966548888763 1.0 0.617660746623971 3 Q7L0J3 1
|
| 59 |
+
Zinc finger, RanBP2-type [IPR001876] 0.5517552318710245 0.8521346771991409 0.3941393472226657 1.0 0.6344705076491134 8 Q92804,P35637,Q01844 3
|
| 60 |
+
Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain [IPR044862] 0.8059181524415997 0.8412534292853093 0.4002059742629578 1.0 0.6380919878515058 3 Q32P28 1
|
| 61 |
+
Nucleoside diphosphate kinase-like domain [IPR034907] 0.7785505124450929 0.8175505601607241 0.4136138678585586 1.0 0.6481801217783452 2 P15531 1
|
| 62 |
+
Heterogeneous nuclear ribonucleoprotein Q acidic domain [IPR041337] 0.7661054172767181 0.7739481500430672 0.4389614538920117 1.0 0.6661647397315124 2 O60506 1
|
| 63 |
+
L27 domain, C-terminal [IPR014775] 0.782497253753204 0.7668791292098259 0.4431533836358494 1.0 0.6662995175722527 3 Q14168,O14936 2
|
| 64 |
+
L27 domain [IPR004172] 0.782497253753204 0.7668791292098259 0.4431533836358494 1.0 0.6662995175722527 3 Q14168,O14936 2
|
| 65 |
+
Prolyl 4-hydroxylase, alpha subunit [IPR006620] 0.5539544182929186 0.7476420329464392 0.4546761042088372 1.0 0.6755968814081662 6 Q32P28 1
|
| 66 |
+
Oxoglutarate/iron-dependent dioxygenase [IPR005123] 0.5539544182929186 0.7476420329464392 0.4546761042088372 1.0 0.6755968814081662 6 Q32P28 1
|
| 67 |
+
Tim44-like domain [IPR007379] 0.7576866764275326 0.7448377489506631 0.4563698114515178 1.0 0.6774466050472308 2 O43615 1
|
| 68 |
+
Translation initiation factor IF2/IF5 domain [IPR002735] 0.7551244509516853 0.736043870756733 0.4617039996871919 1.0 0.681465764392916 2 P20042 1
|
| 69 |
+
Ubiquitin-like domain, USP-type [IPR028135] 0.7543923865300232 0.733537154310356 0.4632308754861085 1.0 0.6831573963878701 2 Q9Y4E8 1
|
| 70 |
+
Dynamin GTPase effector [IPR003130] 0.741581259150804 0.6901065189049175 0.4901272039787931 1.0 0.7051429582812582 2 P50570 1
|
| 71 |
+
GTPase effector domain [IPR020850] 0.741581259150804 0.6901065189049175 0.4901272039787931 1.0 0.7051429582812582 2 P50570 1
|
| 72 |
+
Dynamin stalk domain [IPR000375] 0.741581259150804 0.6901065189049175 0.4901272039787931 1.0 0.7051429582812582 2 P50570 1
|
| 73 |
+
MENTAL domain [IPR019498] 0.7331625183016193 0.6620425444901049 0.5079439561697092 1.0 0.7175665537793653 2 O95772 1
|
| 74 |
+
Peptidyl-prolyl cis-trans isomerase, PpiC-type [IPR000297] 0.729136163982438 0.6487627380105941 0.5164917457099345 1.0 0.7230265145279959 2 Q13526 1
|
| 75 |
+
Zinc finger, CXXC-type [IPR002857] 0.7064421669106951 0.5757823478341552 0.5647623064426339 1.0 0.756489000058965 2 Q9Y2K7 1
|
| 76 |
+
Domain of unknown function DUF4749 [IPR031847] 0.706076134699852 0.5746329084041566 0.5655395908788328 1.0 0.756489000058965 2 Q96HC4 1
|
| 77 |
+
DNA-directed RNA polymerase, insert domain [IPR011262] 0.7024158125915063 0.563189685624939 0.5733057256329737 1.0 0.7627742845316202 2 O15160 1
|
| 78 |
+
DNA-directed RNA polymerase, RpoA/D/Rpb3-type [IPR011263] 0.7024158125915063 0.563189685624939 0.5733057256329737 1.0 0.7627742845316202 2 O15160 1
|
| 79 |
+
CARG-binding factor, N-terminal [IPR012956] 0.6844802342606187 0.5085256557264362 0.6110847514959454 1.0 0.7852519833680005 2 Q14103 1
|
| 80 |
+
THIF-type NAD/FAD binding fold [IPR000594] 0.4809675204208103 0.5061776342381423 0.6127319544738745 1.0 0.7852519833680005 7 Q8TBC4 1
|
| 81 |
+
p21 activated kinase binding domain [IPR033923] 0.6702049780380721 0.4668111162471326 0.640635021954191 1.0 0.7999373135096448 2 Q13177 1
|
| 82 |
+
CRIB domain [IPR000095] 0.6702049780380721 0.4668111162471326 0.640635021954191 1.0 0.7999373135096448 2 Q13177 1
|
| 83 |
+
Phosphoribosyltransferase domain [IPR000836] 0.4710410557184757 0.4563796197904197 0.6481170184864218 1.0 0.8058323951894542 6 P11908,P00492,P07741,O60256,P11172 5
|
| 84 |
+
THUMP domain [IPR004114] 0.6606881405563705 0.439954404529608 0.6599701310730541 1.0 0.8124237246734586 2 Q9BV44 1
|
| 85 |
+
Ubiquitin-associated domain [IPR015940] 0.416293795752985 0.4147599298950306 0.6783176556556663 1.0 0.8200181758764244 11 Q14157,Q13501 2
|
| 86 |
+
Aminotransferase, class I/classII [IPR004839] 0.4537448709246987 0.4145239735356553 0.6784904136159537 1.0 0.8200181758764244 7 Q6YP21,O15269,O15270 3
|
| 87 |
+
GTP binding domain [IPR006073] 0.410669433322038 0.3924878006560027 0.6946978234228998 1.0 0.8277370016002321 11 Q969Y2 1
|
| 88 |
+
RBM4, RNA recognition motif 2 [IPR034898] 0.6427525622254784 0.3915602076569393 0.6953831944006919 1.0 0.8277370016002321 2 Q9BQ04 1
|
| 89 |
+
RBM4, RNA recognition motif 1 [IPR034897] 0.6427525622254784 0.3915602076569393 0.6953831944006919 1.0 0.8277370016002321 2 Q9BQ04 1
|
| 90 |
+
Ribosomal protein L11, N-terminal [IPR020784] 0.638360175695464 0.3801725286243058 0.7038173500139637 1.0 0.8304084203608735 2 P30050 1
|
| 91 |
+
Ribosomal protein L11, C-terminal [IPR020783] 0.638360175695464 0.3801725286243058 0.7038173500139637 1.0 0.8304084203608735 2 P30050 1
|
| 92 |
+
Rab-GTPase-TBC domain [IPR000195] 0.4459988239426313 0.3779316470732258 0.7054813720141395 1.0 0.8315492194109115 6 Q8TC07 1
|
| 93 |
+
Proteasome alpha-subunit, N-terminal domain [IPR000426] 0.4288114072790575 0.336360417936649 0.736599094230872 1.0 0.8552754276624 7 P60900,P25788 2
|
| 94 |
+
Circularly permuted (CP)-type guanine nucleotide-binding (G) domain [IPR030378] 0.4799533258886183 0.3245251773392142 0.7455404640324399 1.0 0.8627966035618558 4 P36915 1
|
| 95 |
+
PTB/PI domain [IPR006020] 0.613368713949145 0.3098344525200435 0.756686850615472 1.0 0.8675280973211682 3 Q9UKG1 1
|
| 96 |
+
Zinc finger, PHD-type [IPR001965] 0.3714702721735904 0.3077171366905215 0.7582975788576036 1.0 0.8675280973211682 15 Q9BTC0,Q9Y2K7,Q8IWS0,Q9UPP1,Q14839 5
|
| 97 |
+
Damage-control phosphatase ARMT1-like, metal-binding domain [IPR002791] 0.6035871156661833 0.296954806064679 0.76650101308448 1.0 0.8713631283117141 2 Q9H993 1
|
| 98 |
+
Peptidase C14A, caspase catalytic domain [IPR015917] 0.4668538911855519 0.2929941857046278 0.7695265959132296 1.0 0.8724306613641736 4 P55212,P55210 2
|
| 99 |
+
Peptidase C14, p20 domain [IPR001309] 0.4668538911855519 0.2929941857046278 0.7695265959132296 1.0 0.8724306613641736 4 P55212,P55210 2
|
| 100 |
+
Peptidase C14, caspase non-catalytic subunit p10 [IPR002138] 0.4668538911855519 0.2929941857046278 0.7695265959132296 1.0 0.8724306613641736 4 P55212,P55210 2
|
| 101 |
+
GTP binding protein, second domain [IPR031662] 0.5918740849194783 0.2718461170709923 0.7857403437069566 1.0 0.8867586769239939 2 Q9Y295 1
|
| 102 |
+
Thioesterase domain [IPR006683] 0.5786969253294352 0.2454434527315344 0.8061130873082676 1.0 0.8988892353700119 2 Q9NPJ3 1
|
| 103 |
+
Hotdog acyl-CoA thioesterase (ACOT)-type domain [IPR033120] 0.5786969253294352 0.2454434527315344 0.8061130873082676 1.0 0.8988892353700119 2 Q9Y305 1
|
| 104 |
+
Fzo/mitofusin HR2 domain [IPR006884] 0.5761346998535927 0.2405397495401235 0.8099118519458404 1.0 0.9026941166078936 2 Q8IWA4 1
|
| 105 |
+
Zinc finger, CHHC-type [IPR012996] 0.5452215305748811 0.1874513987833179 0.8513067263309666 1.0 0.9326363331019552 3 P52597,P55795 2
|
| 106 |
+
Beta-adaptin appendage, C-terminal subdomain [IPR015151] 0.5441230318564629 0.1858408562919623 0.85256956390017 1.0 0.9326363331019552 3 O00203,Q10567 2
|
| 107 |
+
Glutathione S-transferase, C-terminal-like [IPR010987] 0.3522445725169406 0.1856067811246464 0.8527531354058562 1.0 0.9326363331019552 11 Q9H7Z7 1
|
| 108 |
+
Serpin domain [IPR023796] 0.5380673499268019 0.1766263603059184 0.85980188708356 1.0 0.9394653281891028 2 P50454 1
|
| 109 |
+
Far upstream element-binding protein, C-terminal [IPR015096] 0.5373352855051327 0.1755613504709853 0.8606385685157916 1.0 0.9395545052129352 2 Q92945 1
|
| 110 |
+
NOPS [IPR012975] 0.5346027096301722 0.1723707629910862 0.8631460558869231 1.0 0.941357328582889 3 P23246,Q8WXF1 2
|
| 111 |
+
AARP2CN [IPR012948] 0.533674963396779 0.1703282434031526 0.8647520007617016 1.0 0.9417891426206032 2 Q2NL82 1
|
| 112 |
+
Ribosome biogenesis protein BMS1/TSR1, C-terminal [IPR007034] 0.533674963396779 0.1703282434031526 0.8647520007617016 1.0 0.9417891426206032 2 Q2NL82 1
|
| 113 |
+
Bms1/Tsr1-type G domain [IPR030387] 0.533674963396779 0.1703282434031526 0.8647520007617016 1.0 0.9417891426206032 2 Q2NL82 1
|
| 114 |
+
Zinc finger, LIM-type [IPR001781] 0.3521293423212172 0.157771394385396 0.874636940279838 1.0 0.9490135945880211 8 Q13642,Q9NR12,Q14847,Q96HC4 4
|
| 115 |
+
Vps4 oligomerisation, C-terminal [IPR015415] 0.5226939970717467 0.1555410932944763 0.8763947603599589 1.0 0.950479222220392 2 P55072 1
|
| 116 |
+
Ribosomal protein L30, N-terminal [IPR012988] 0.5204978038067434 0.1527461754363896 0.8785984452669202 1.0 0.9511021649041532 2 Q6DKI1 1
|
| 117 |
+
Ribosomal protein L30, ferredoxin-like fold domain [IPR016082] 0.5204978038067434 0.1527461754363896 0.8785984452669202 1.0 0.9511021649041532 2 Q6DKI1 1
|
| 118 |
+
Ribosomal protein L7, eukaryotic/archaeal [IPR035808] 0.5204978038067434 0.1527461754363896 0.8785984452669202 1.0 0.9511021649041532 2 Q6DKI1 1
|
| 119 |
+
Zinc finger C2H2 AKAP95-type [IPR034736] 0.5189798367889528 0.1521514554759633 0.8790674809985091 1.0 0.9511689379664128 3 O43823 1
|
| 120 |
+
Serine-tRNA ligase catalytic core domain [IPR033729] 0.5172035139092288 0.148654169080788 0.8818265270829424 1.0 0.95371233938799 2 Q9NP81 1
|
| 121 |
+
Peptidase C19, ubiquitin-specific peptidase, DUSP domain [IPR006615] 0.5109993850167531 0.1427160274548059 0.8865144582164999 1.0 0.9578950763237052 3 Q9Y4E8 1
|
| 122 |
+
Dehydrogenase, E1 component [IPR001017] 0.5091508052708706 0.1391526975374615 0.8893294866415831 1.0 0.959604598571209 2 P08559 1
|
| 123 |
+
GINS subunit, domain A [IPR021151] 0.5027462467960455 0.1335820632346015 0.8937330685201794 1.0 0.9625768980602486 3 Q9BRT9,Q9Y248 2
|
| 124 |
+
Ribose-phosphate pyrophosphokinase, N-terminal domain [IPR029099] 0.4987184181618456 0.1293512962571851 0.897079683782644 1.0 0.9657358513750456 3 Q14558,P11908 2
|
| 125 |
+
Gamma-adaptin ear (GAE) domain [IPR008153] 0.4970717423133319 0.1262034303562471 0.8995708960476119 1.0 0.967525583726934 2 Q9UJY5 1
|
| 126 |
+
Zinc finger, PARP-type [IPR001510] 0.4948755490483262 0.1240127228739337 0.901305201431356 1.0 0.9689445880949432 2 P49916 1
|
| 127 |
+
Adenylate kinase, active site lid domain [IPR007862] 0.4912152269399772 0.1204708745785011 0.9041101503052602 1.0 0.969282461415419 2 P54819 1
|
| 128 |
+
Ataxin-2, C-terminal [IPR009818] 0.4860907759882881 0.1157382593943601 0.9078599833797948 1.0 0.971626454575041 2 Q14694 1
|
| 129 |
+
Alcohol dehydrogenase, N-terminal [IPR013154] 0.330645161290323 0.1101848818027841 0.9122627518386008 1.0 0.9739979540663616 6 Q08257,Q00796,Q8N4Q0,P11766,Q99536 5
|
| 130 |
+
Uncharacterised domain CHP00451 [IPR004521] 0.47364568081991 0.1053059179779735 0.916133067220547 1.0 0.975899047426997 2 Q9ULC4 1
|
| 131 |
+
Metastasis-associated protein MTA1, R1 domain [IPR035170] 0.4688872620790638 0.1016990459426999 0.9189955594484402 1.0 0.9771651326557868 2 O94776 1
|
| 132 |
+
ELM2 domain [IPR000949] 0.4688872620790638 0.1016990459426999 0.9189955594484402 1.0 0.9771651326557868 2 O94776 1
|
| 133 |
+
Chaperone DnaJ, C-terminal [IPR002939] 0.348337720723049 0.0979964372828589 0.9219351223886312 1.0 0.9783026953136992 4 O60884 1
|
| 134 |
+
14-3-3 domain [IPR023410] 0.3222140762463349 0.0977583243819441 0.9221242011374996 1.0 0.9783026953136992 6 P63104,P27348,P62258,Q04917,P31946 5
|
| 135 |
+
Ribosomal protein L18e/L15P [IPR021131] 0.4577508735804176 0.0943251657437143 0.9248508596613644 1.0 0.9796132800545132 3 P46776 1
|
| 136 |
+
Band 4.1, C-terminal [IPR008379] 0.4573416331014281 0.0940445312242026 0.925073782663898 1.0 0.9796132800545132 3 O43491,P11171 2
|
| 137 |
+
SAB domain [IPR007477] 0.4573416331014281 0.0940445312242026 0.925073782663898 1.0 0.9796132800545132 3 O43491,P11171 2
|
| 138 |
+
FERM adjacent (FA) [IPR014847] 0.4573416331014281 0.0940445312242026 0.925073782663898 1.0 0.9796132800545132 3 O43491,P11171 2
|
| 139 |
+
DMAP1-binding domain [IPR010506] 0.4553440702781804 0.0925210876399996 0.9262840375639164 1.0 0.980005993525938 2 P26358 1
|
| 140 |
+
START domain [IPR002913] 0.4538799414348441 0.0916211709792617 0.926999030188468 1.0 0.980234005197569 2 Q14849 1
|
| 141 |
+
Alanyl-tRNA synthetase, class IIc, N-terminal [IPR018164] 0.451683748169835 0.0903037077260307 0.9280458738524856 1.0 0.9805371563102052 2 Q5JTZ9 1
|
| 142 |
+
Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) [IPR002314] 0.3141495601173026 0.0868137853835632 0.9308195298442524 1.0 0.9818565018135216 6 P07814,P49591,Q9NP81,Q9BW92,P26639 5
|
| 143 |
+
Heat shock protein DnaJ, cysteine-rich domain [IPR001305] 0.4430950178703462 0.0850532545662734 0.932219053032164 1.0 0.9818565018135216 3 O60884 1
|
| 144 |
+
EB1, C-terminal [IPR004953] 0.4421669106881463 0.0850293495749112 0.9322380576105256 1.0 0.9818565018135216 2 Q15691 1
|
| 145 |
+
Aminoacyl-tRNA synthetase, class II [IPR006195] 0.314726404700701 0.0826597999256649 0.9341220504479768 1.0 0.9823144388202664 11 P07814,P49591,Q9NP81,Q9BW92,Q15046,Q6PI48,Q9Y285,P26639,P14868,O43776 10
|
| 146 |
+
Brix domain [IPR007109] 0.4375686561699012 0.081956629055462 0.9346812023788476 1.0 0.9823144388202664 3 Q9NQ55,Q9H7B2 2
|
| 147 |
+
Ribosomal protein S10 domain [IPR027486] 0.4348462664714488 0.0814287787526633 0.9351009629638214 1.0 0.9823144388202664 2 P60866 1
|
| 148 |
+
Aminoacyl-tRNA synthetase, class II (D/K/N) [IPR004364] 0.3285714285714307 0.0813080137163857 0.9351970010695724 1.0 0.9823144388202664 4 P14868,O43776,Q6PI48 3
|
| 149 |
+
BAG domain [IPR003103] 0.4339772311301252 0.0800556519545499 0.9361929941004324 1.0 0.982562385032863 3 O95429 1
|
| 150 |
+
KOW [IPR005824] 0.3161172161172181 0.072789919613462 0.941973292661052 1.0 0.982562385032863 4 Q92917,P61353,P62701 3
|
| 151 |
+
Phosphatidylinositol 3-/4-kinase, catalytic domain [IPR000403] 0.2968120190545943 0.0720398777586212 0.9425701724154518 1.0 0.982562385032863 5 Q8NEB9,P42345,Q9BTU6,Q9UBF8 4
|
| 152 |
+
WHEP-TRS domain [IPR000738] 0.3139194139194162 0.0714356806355594 0.9430510130937636 1.0 0.982562385032863 4 P23381,P07814,P56192 3
|
| 153 |
+
PPM-type phosphatase domain [IPR001932] 0.403001464128845 0.0697551308737227 0.9443885605141856 1.0 0.982562385032863 2 Q9H0C8 1
|
| 154 |
+
Threonine-tRNA ligase catalytic core domain [IPR033728] 0.3960468521229817 0.0679399986648598 0.945833397965146 1.0 0.982562385032863 2 Q9BW92 1
|
| 155 |
+
PSP, proline-rich [IPR006568] 0.3931185944363168 0.067242315216639 0.9463887986634852 1.0 0.982562385032863 2 Q13435 1
|
| 156 |
+
Nucleotidyl transferase domain [IPR005835] 0.4020686078827879 0.0666509374913132 0.9468595936139323 1.0 0.982562385032863 3 Q9NR50 1
|
| 157 |
+
Zinc finger, PHD-finger [IPR019787] 0.3045295740787526 0.066605036436477 0.9468961361553768 1.0 0.982562385032863 14 Q9BTC0,Q9Y2K7,Q14839,Q9UPP1 4
|
| 158 |
+
Dynamin, GTPase domain [IPR001401] 0.3988747029645039 0.0656188075976279 0.947681315086579 1.0 0.982562385032863 3 P50570 1
|
| 159 |
+
RNA-binding S4 domain [IPR002942] 0.3963052500399718 0.0648247982132014 0.9483134968541838 1.0 0.982562385032863 3 P62701 1
|
| 160 |
+
DNA-directed RNA polymerase, subunit 2, hybrid-binding domain [IPR007120] 0.3806734992679331 0.0646764934229353 0.9484315791582224 1.0 0.982562385032863 2 Q9H9Y6 1
|
| 161 |
+
RNA polymerase Rpb2, domain 3 [IPR007645] 0.3806734992679331 0.0646764934229353 0.9484315791582224 1.0 0.982562385032863 2 Q9H9Y6 1
|
| 162 |
+
RNA polymerase, beta subunit, protrusion [IPR007644] 0.3806734992679331 0.0646764934229353 0.9484315791582224 1.0 0.982562385032863 2 Q9H9Y6 1
|
| 163 |
+
RNA polymerase Rpb2, domain 2 [IPR007642] 0.3806734992679331 0.0646764934229353 0.9484315791582224 1.0 0.982562385032863 2 Q9H9Y6 1
|
| 164 |
+
RNA polymerase Rpb2, domain 7 [IPR007641] 0.3806734992679331 0.0646764934229353 0.9484315791582224 1.0 0.982562385032863 2 Q9H9Y6 1
|
| 165 |
+
Ubiquitin-activating enzyme, SCCH domain [IPR019572] 0.366032210834558 0.0623776645049443 0.9502620814587376 1.0 0.982562385032863 2 P22314 1
|
| 166 |
+
Ubiquitin-activating enzyme E1, C-terminal [IPR018965] 0.366032210834558 0.0623776645049443 0.9502620814587376 1.0 0.982562385032863 2 P22314 1
|
| 167 |
+
Ubiquitin-activating enzyme E1, FCCH domain [IPR032418] 0.366032210834558 0.0623776645049443 0.9502620814587376 1.0 0.982562385032863 2 P22314 1
|
| 168 |
+
Ubiquitin-activating enzyme E1, four-helix bundle [IPR032420] 0.366032210834558 0.0623776645049443 0.9502620814587376 1.0 0.982562385032863 2 P22314 1
|
| 169 |
+
Tubulin binding cofactor C-like domain [IPR012945] 0.3528550512445049 0.0608500306987076 0.951478645376004 1.0 0.982562385032863 2 O75695 1
|
| 170 |
+
Replication factor C, C-terminal [IPR013748] 0.3804467228121568 0.0605898359469882 0.9516858683919608 1.0 0.982562385032863 3 P35250,P35249 2
|
| 171 |
+
Phosphoinositide 3-kinase, accessory (PIK) domain [IPR001263] 0.34846266471449 0.0604357868628606 0.9518085569414212 1.0 0.982562385032863 2 Q8NEB9 1
|
| 172 |
+
Ribosomal protein S4/S9, N-terminal [IPR001912] 0.3243045387994095 0.0588161609963791 0.9530985361308484 1.0 0.982562385032863 2 P46781 1
|
| 173 |
+
Zinc finger, TFIIB-type [IPR013137] 0.2961200585651447 0.0578918853903867 0.9538347468035988 1.0 0.982562385032863 2 P29083 1
|
| 174 |
+
Glutamine amidotransferase type 2 domain [IPR017932] 0.3419992676675212 0.0541586500742625 0.9568087647660076 1.0 0.983931466456886 3 Q06210,Q06203 2
|
| 175 |
+
Major sperm protein (MSP) domain [IPR000535] 0.340900768949103 0.0540372782043166 0.9569054639041636 1.0 0.983931466456886 3 Q9P0L0,Q8NHP6 2
|
| 176 |
+
C-CAP/cofactor C-like domain [IPR017901] 0.3350421091175395 0.0534363052205208 0.9573842791392057 1.0 0.983931466456886 3 Q15814,O75695 2
|
| 177 |
+
CARP motif [IPR006599] 0.3350421091175395 0.0534363052205208 0.9573842791392057 1.0 0.983931466456886 3 Q15814,O75695 2
|
| 178 |
+
Translation initiation factor, beta propellor-like domain [IPR013979] 0.2282051282051306 0.0445416552833541 0.9644726487934048 1.0 0.988171845077929 4 Q96J01,Q9NV06,Q9BY44 3
|
| 179 |
+
CS domain [IPR007052] 0.2729273661041813 0.020725074625949 0.9834649666548876 1.0 1.0 8 Q9P035,Q9Y266,Q15185,Q9HB71,Q9Y2Z0,Q96RS6,Q8WVJ2 7
|
interpro_domain/selections.json
ADDED
|
The diff for this file is too large to render.
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|
|
interpro_family/advanced/idx2term.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{}
|
interpro_family/basic/idx2term.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"0": "Proteasome, subunit alpha/beta [IPR001353]", "1": "14-3-3 protein [IPR000308]"}
|
interpro_family/basic/plot_0.png
ADDED
|
Git LFS Details
|
interpro_family/basic/plot_1.png
ADDED
|
Git LFS Details
|
interpro_family/consensus.joblib
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9330e66ab9403a8ae6dbeac65ece018ee9e4679dd1ebd6d3da7ac218cf0962eb
|
| 3 |
+
size 351115
|
interpro_family/df_merge.tsv
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
interpro_family/metrics.json
ADDED
|
@@ -0,0 +1,7 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"type_of_task": "ranksum",
|
| 3 |
+
"signature_size": 2734,
|
| 4 |
+
"annotations_size": 2150,
|
| 5 |
+
"title": "Average number of proteins per term",
|
| 6 |
+
"value": 1.2758139534883721
|
| 7 |
+
}
|