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- interpro_active_site/advanced/idx2term.json +1 -0
- interpro_active_site/basic/idx2term.json +1 -0
- interpro_active_site/consensus.joblib +3 -0
- interpro_active_site/df_merge.tsv +1 -0
- interpro_active_site/metrics.json +7 -0
- interpro_active_site/paths.json +1 -0
- interpro_active_site/result.tsv +5 -0
- interpro_active_site/selections.json +1 -0
- interpro_binding_site/advanced/idx2term.json +1 -0
- interpro_binding_site/advanced/plot_0.png +3 -0
- interpro_binding_site/basic/idx2term.json +1 -0
- interpro_binding_site/basic/plot_0.png +3 -0
- interpro_binding_site/consensus.joblib +3 -0
- interpro_binding_site/df_merge.tsv +2 -0
- interpro_binding_site/metrics.json +7 -0
- interpro_binding_site/paths.json +1 -0
- interpro_binding_site/result.tsv +3 -0
- interpro_binding_site/selections.json +1 -0
- interpro_conserved_site/advanced/idx2term.json +1 -0
- interpro_conserved_site/advanced/plot_0.png +3 -0
- interpro_conserved_site/basic/idx2term.json +1 -0
- interpro_conserved_site/basic/plot_0.png +3 -0
- interpro_conserved_site/basic/plot_1.png +3 -0
- interpro_conserved_site/consensus.joblib +3 -0
- interpro_conserved_site/df_merge.tsv +2 -0
- interpro_conserved_site/metrics.json +7 -0
- interpro_conserved_site/paths.json +1 -0
- interpro_conserved_site/result.tsv +27 -0
- interpro_conserved_site/selections.json +1 -0
- interpro_domain/advanced/idx2term.json +1 -0
- interpro_domain/advanced/plot_0.png +3 -0
- interpro_domain/advanced/plot_1.png +3 -0
- interpro_domain/basic/idx2term.json +1 -0
- interpro_domain/basic/plot_0.png +3 -0
- interpro_domain/basic/plot_1.png +3 -0
- interpro_domain/basic/plot_2.png +3 -0
- interpro_domain/basic/plot_3.png +3 -0
- interpro_domain/basic/plot_4.png +3 -0
- interpro_domain/basic/plot_5.png +3 -0
- interpro_domain/basic/plot_6.png +3 -0
- interpro_domain/consensus.joblib +3 -0
- interpro_domain/df_merge.tsv +5 -0
- interpro_domain/metrics.json +7 -0
- interpro_domain/paths.json +1 -0
- interpro_domain/result.tsv +200 -0
- interpro_domain/selections.json +0 -0
- interpro_family/advanced/idx2term.json +1 -0
- interpro_family/advanced/plot_0.png +3 -0
- interpro_family/advanced/plot_1.png +3 -0
- interpro_family/basic/idx2term.json +1 -0
interpro_active_site/advanced/idx2term.json
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{}
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interpro_active_site/basic/idx2term.json
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{}
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interpro_active_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:b1b139b3187293b40ee1039f8abdb54b063554aeb8089f103ced3a41648da5a9
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size 62121
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interpro_active_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_active_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2644,
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"annotations_size": 53,
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"title": "Average number of proteins per term",
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"value": 2.452830188679245
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}
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interpro_active_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C198/C198_val_log2fc"}
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interpro_active_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Serine carboxypeptidase, serine active site [IPR018202] 0.9598636879969712 2.181621095850137 0.02913750862557 0.7913783841325687 0.2784559650834257 3 Q9H3G5,Q9HB40 2
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Cysteine peptidase, histidine active site [IPR025660] 0.8807721423164265 1.0687087628960836 0.2852009217210449 0.9999999813038948 0.5212292707315649 2 P53634 1
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Cysteine peptidase, asparagine active site [IPR025661] 0.8807721423164265 1.0687087628960836 0.2852009217210449 0.9999999813038948 0.5212292707315649 2 P53634 1
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Histidine acid phosphatase active site [IPR033379] 0.8493565480696422 0.9537763176488712 0.3401968795322587 0.9999999997314896 0.5561766756728779 2 Q9NPH0 1
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interpro_active_site/selections.json
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{"all_annotations": ["ATP synthase, F0 complex, subunit A, active site [IPR023011]", "ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glutaredoxin active site [IPR011767]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 18 (GH18) active site [IPR001579]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]"], "available_proteins": ["ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADSS", "AKT2", "APEH", "ATP5A1", "ATP5B", "ATP6", "ATP6V1A", "ATP6V1B2", "AURKA", "BLMH", "CAMK1", "CAMK2G", "CAPN1", "CAPN2", "CDC34", "CDK1", "CDK2", "CDK4", "CDK5", "CDK6", "CHUK", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A1", "CSNK2A2", "CTBS", "CTSA", "CTSB", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "EPHA7", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLRX", "GLUD1", "GSK3B", "GSR", "GUSB", "HADHB", "HMGCS1", "LDHA", "LDHB", "LONP1", "MAP2K1", "MAPK1", "MDH1", "MDH2", "MTMR2", "MTMR6", "NEK9", "NME1", "NME6", "PAK1", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKMYT1", "PKN2", "PLK1", "PREP", "PRKCD", "PRPF4B", "PTK7", "PTPN1", "PTPN11", "RNASET2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SUCLG1", "TALDO1", "TIGAR", "TOP1", "TPI1", "TPP2", "TRIO", "TTK", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "UMPS", "VRK1"], "leading_proteins": ["ACP6", "CPVL", "CTSC", "SCPEP1"]}
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interpro_binding_site/advanced/idx2term.json
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{"0": "Beta tubulin, autoregulation binding site [IPR013838]"}
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interpro_binding_site/advanced/plot_0.png
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interpro_binding_site/basic/idx2term.json
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{"0": "Beta tubulin, autoregulation binding site [IPR013838]"}
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interpro_binding_site/basic/plot_0.png
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interpro_binding_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:c99fe0524ae9c097f1cf94c0db8b7cc12c304b6b5c89170ee15355491069d56a
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size 59703
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interpro_binding_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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Beta tubulin, autoregulation binding site [IPR013838] 5 6 2.8312668735707787 0.0046364018299505 3.5533980582524274 5.54126213592233 0.5823511994709325 0.3808337519133083 1.5578062452886454 0.9632803779920796 1.1906256051626651 0.3058955364405814 9.5501646683206e-09 8.471957845697295e-13 6.275167299951582e-11 1.5040937032126972e-08 9.4206715064497e-07
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interpro_binding_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2644,
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"annotations_size": 27,
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"title": "Average number of proteins per term",
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"value": 4.555555555555555
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}
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interpro_binding_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C198/C198_val_log2fc"}
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interpro_binding_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Beta tubulin, autoregulation binding site [IPR013838] 0.9878695981804388 2.8312668735707787 0.0046364018299505 0.1179212564168751 0.1251828494086637 6 Q9BVA1,P07437,Q13885,P68371,P04350 5
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Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798] 0.6585919757759219 0.3457506291806103 0.729530131497762 0.9999999999999996 0.8564049369756337 2 P34897 1
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interpro_binding_site/selections.json
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{"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]"], "available_proteins": ["ACACA", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT2", "APEX1", "APEX2", "AURKA", "BPNT1", "CALM3", "CALU", "CAMK1", "CAMK2G", "CAPN1", "CAPN2", "CAPNS1", "CDK1", "CDK2", "CDK4", "CDK5", "CDK6", "CETN2", "CHUK", "COX2", "CSK", "CSNK1A1", "CSNK2A1", "CSNK2A2", "CYB5B", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "EPHA7", "EPS15", "EPS15L1", "FKBP10", "FKBP14", "FKBP7", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3B", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "LETM1", "MACF1", "MAP2K1", "MAPK1", "MCCC1", "MICU1", "MYH10", "MYH14", "MYH9", "MYO1B", "MYO1C", "MYO1D", "NRDC", "NUCB1", "NUCB2", "OXSR1", "PA2G4", "PAK1", "PAK2", "PC", "PCCA", "PDCD6", "PEF1", "PGD", "PKMYT1", "PKN2", "PLCG1", "PLK1", "PLS3", "PMPCA", "PMPCB", "PPM1G", "PRKCD", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "TKT", "TTK", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "UQCRC2", "VRK1"], "leading_proteins": ["SHMT2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B"]}
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interpro_conserved_site/advanced/idx2term.json
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{"0": "Tubulin, conserved site [IPR017975]"}
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interpro_conserved_site/advanced/plot_0.png
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interpro_conserved_site/basic/idx2term.json
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{"0": "Tubulin, conserved site [IPR017975]", "1": "Mini-chromosome maintenance, conserved site [IPR018525]"}
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interpro_conserved_site/basic/plot_0.png
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interpro_conserved_site/basic/plot_1.png
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interpro_conserved_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:a2e9fb3e29f0d58c6436c3c6088d753d3eda3c29d0813a3fb8c53242a973dd7f
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size 60765
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interpro_conserved_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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Tubulin, conserved site [IPR017975] 5 6 2.8312668735707787 0.0046364018299505 3.6140776699029127 5.883495145631068 0.537603280896448 0.3771225437200781 1.6631634011190108 1.117390952728082 1.2199662970774952 0.3090115161057067 1.7805540506852606e-06 1.8108482464958843e-10 1.2912404950479516e-08 2.765770662469611e-06 0.0001429815632908
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interpro_conserved_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2644,
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"annotations_size": 265,
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"title": "Average number of proteins per term",
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"value": 2.4754716981132074
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}
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interpro_conserved_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C198/C198_val_log2fc"}
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interpro_conserved_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Tubulin, conserved site [IPR017975] 0.9878695981804388 2.8312668735707787 0.0046364018299505 0.7081465740957209 0.6778898013059257 6 Q9BVA1,P07437,Q13885,P68371,P04350 5
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Tetraspanin, conserved site [IPR018503] 0.9844814534443602 1.4572235762204664 0.1450546746828931 1.0 0.6778898013059257 2 O43657 1
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Syntaxin/epimorphin, conserved site [IPR006012] 0.6898165534998274 1.33828823192908 0.1808024965078627 1.0 0.6778898013059257 4 Q9P2W9 1
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| 5 |
+
Proteasome beta-type subunit, conserved site [IPR016050] 0.6429131834369312 1.3241239427969835 0.1854618850498086 1.0 0.6778898013059257 8 P28072,P49721,Q99436 3
|
| 6 |
+
Haem oxygenase conserved site [IPR018207] 0.9292202876608614 1.2491049007721169 0.2116267083925227 1.0 0.7010134715502315 2 P30519 1
|
| 7 |
+
3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180] 0.8966691900075685 1.127563655195038 0.2595042432168946 1.0 0.7759692512556903 2 P40939 1
|
| 8 |
+
ABC transporter-like, conserved site [IPR017871] 0.5972794556132747 1.1243947481668586 0.2608455990530998 1.0 0.7759692512556903 7 O75027 1
|
| 9 |
+
Aldehyde dehydrogenase, cysteine active site [IPR016160] 0.5928901714430574 1.118070869154186 0.2635367268415551 1.0 0.7759692512556903 6 P51648 1
|
| 10 |
+
Intermediate filament protein, conserved site [IPR018039] 0.5529813307579957 0.9035130467324692 0.366253667083442 1.0 0.8723084974021048 8 Q16352,P07196,P08670 3
|
| 11 |
+
Chromo domain, conserved site [IPR023779] 0.553409090909099 0.7667512256233738 0.4432294406038291 1.0 0.9157533925338563 4 P83916,P45973,Q14781 3
|
| 12 |
+
Enoyl-CoA hydratase/isomerase, conserved site [IPR018376] 0.5292608328998366 0.6708798113961122 0.502297098402126 1.0 0.9284907700239912 4 P40939 1
|
| 13 |
+
Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.9284907700239912 2 P05067 1
|
| 14 |
+
Proteinase inhibitor I2, Kunitz, conserved site [IPR020901] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.9284907700239912 2 P05067 1
|
| 15 |
+
Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.9284907700239912 2 P05067 1
|
| 16 |
+
Thioredoxin, conserved site [IPR017937] 0.4876612214211027 0.5757304958129952 0.5647973592194044 1.0 0.9714517760001684 10 O95881,O43396,Q9H1E5,P07237 4
|
| 17 |
+
Ribosomal protein S5, N-terminal, conserved site [IPR018192] 0.7316426949280814 0.5527019830465326 0.5804674952369027 1.0 0.974772760970022 2 P82675 1
|
| 18 |
+
Kinesin motor domain, conserved site [IPR019821] 0.4547902975476939 0.4186015573638327 0.6755073512273495 1.0 0.985188936909938 11 Q86Y91,Q14807 2
|
| 19 |
+
Short-chain dehydrogenase/reductase, conserved site [IPR020904] 0.407395715096293 0.2424949285472301 0.8083966860459872 1.0 0.985188936909938 10 Q06136,Q53GQ0 2
|
| 20 |
+
Phosphatidylinositol 3/4-kinase, conserved site [IPR018936] 0.4051495645588769 0.1456432558777058 0.8842030187923291 1.0 0.985188936909938 3 P42345,O00443 2
|
| 21 |
+
Acyl-CoA-binding protein, ACBP, conserved site [IPR022408] 0.5393641180923456 0.1205029148092209 0.9040847707884324 1.0 0.985188936909938 2 Q9H3P7 1
|
| 22 |
+
DNA-directed DNA polymerase, family B, conserved site [IPR017964] 0.518168054504154 0.0966985061748505 0.9229658261723586 1.0 0.985188936909938 2 P09884 1
|
| 23 |
+
Dynamin, GTPase region, conserved site [IPR019762] 0.4731264193792492 0.0605348128969317 0.9517296899960156 1.0 0.985188936909938 2 P50570 1
|
| 24 |
+
Ribosomal S11, conserved site [IPR018102] 0.4485238455715291 0.0478034128532048 0.9618729166043556 1.0 0.9907740059908156 2 P82912 1
|
| 25 |
+
Mini-chromosome maintenance, conserved site [IPR018525] 0.324109173616369 0.0350241580021306 0.9720604773882138 1.0 0.9907740059908156 6 P25205,P33991,P49736,Q14566,P33993 5
|
| 26 |
+
Profilin conserved site [IPR027310] 0.3050719152157385 0.0257493940298873 0.9794572261622544 1.0 0.9907740059908156 2 P35080 1
|
| 27 |
+
RNA polymerase, beta subunit, conserved site [IPR007121] 0.2967448902346636 0.0256234316012363 0.9795576964890328 1.0 0.9907740059908156 2 P30876 1
|
interpro_conserved_site/selections.json
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{"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Aldose 1-epimerase, conserved site [IPR018052]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "CBX family C-terminal motif [IPR033773]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA mismatch repair, conserved site [IPR014762]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dpy-30 motif [IPR007858]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Endonuclease III-like, conserved site-2 [IPR004036]", "Endonuclease III-like, iron-sulphur cluster loop motif [IPR003651]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Ependymin, conserved site [IPR018224]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Heavy-metal-associated, conserved site [IPR017969]", "Helix-hairpin-helix motif [IPR000445]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Helix-turn-helix motif [IPR000047]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "Homeobox, conserved site [IPR017970]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase TruD, conserved site [IPR020119]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RIO kinase, conserved site [IPR018935]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Rel homology domain, conserved site [IPR030492]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal RNA adenine methylase transferase, conserved site [IPR020596]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "Tyrosine-protein kinase, receptor class V, conserved site [IPR001426]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Uncharacterised protein family UPF0029, Impact, conserved site [IPR020569]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "AAMP", "ABCB1", "ABCB7", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ACAA2", "ACAD9", "ACADM", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACIN1", "ACLY", "ACSF3", "ACSL1", "ACSL3", "ACSL4", "ACTL6A", "ACTN1", "ACTN2", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK3", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA6", "ANXA7", "AP1M1", "AP1S2", "AP2M1", "AP2S1", "AP3M1", "APEX1", "APLP2", "APP", "ARIH2", "ARSA", "ATAD1", "ATP5C1", "ATP5O", "ATP7B", "BAG6", "BAZ1A", "BAZ1B", "BCS1L", "BOP1", "BPNT1", "BPTF", "BRD1", "BRD2", "BUD31", "CAD", "CALR", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CASK", "CBL", "CBR1", "CBX1", "CBX2", "CBX3", "CBX5", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDX2", "CETN2", "CHAF1B", "CHD4", "CLGN", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "CORO1A", "CORO1C", "CORO7", "CPOX", "CRYZ", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4B", "CUL5", "CYP51A1", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX6", "DHCR7", "DHFR", "DHRS7", "DHX15", "DHX16", "DHX29", "DHX30", "DHX36", "DHX8", "DHX9", "DIDO1", "DIMT1", "DIS3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNMT1", "DPY30", "DRG1", "DRG2", "DSC1", "DSC3", "DSG2", "DST", "DTYMK", "DYNLL1", "ECH1", "ECHS1", "ECI1", "ECI2", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A3", "EIF4E", "ENO1", "ENO2", "EPB41", "EPB41L2", "EPB41L5", "EPDR1", "EPHA7", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FCGRT", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FUCA1", "FUCA2", "GAA", "GALK1", "GALM", "GANAB", "GART", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPB", "GNPDA1", "GNS", "GPI", "GRHPR", "GRWD1", "GSPT1", "GTF3C2", "GUF1", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HIBADH", "HLA-A", "HLA-B", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA14", "HSPA1B", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IDH1", "IDH2", "IDH3A", "IDH3B", "ILVBL", "IMPACT", "IMPDH1", "IMPDH2", "INA", "IQGAP1", "IVD", "KDSR", "KIF11", "KIF18B", "KIF20A", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF4A", "KIF5B", "KIF7", "KIFC1", "LAMP1", "LARS", "LARS2", "LBR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LRWD1", "LSS", "MACF1", "MAPK1", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME1", "MGST2", "MID1", "MIF", "MKRN2", "MPI", "MPP6", "MPST", "MRPL3", "MRPS11", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "MVK", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFV1", "NEFL", "NEFM", "NES", "NLE1", "NMT1", "NNT", "NOP2", "NSD2", "NSF", "NTHL1", "NUBP2", "NUDT1", "NUDT12", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PGM3", "PHF14", "PHF8", "PHGDH", "PHIP", "PIK3C2A", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLRG1", "PLS3", "PNP", "POLA1", "POLD1", "POLR1B", "POLR2B", "POLR2C", "PPIB", "PPID", "PPIF", "PPIG", "PPIH", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS1", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PUS7", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RBBP4", "RBBP7", "RCL1", "RDH13", "RDX", "RELA", "RIDA", "RIOK2", "RNF2", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RSF1", "RSL24D1", "S100A10", "S100A11", "SART1", "SBDS", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC25A42", "SLC27A2", "SLC27A4", "SLIT2", "SMARCA4", "SMU1", "SNRNP40", "SPATA5", "SPATA5L1", "SPTBN1", "SPTBN2", "SRCAP", "SRM", "STAM", "STMN1", "STOM", "STX18", "STX4", "STX5", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SYNE2", "TBL3", "TCP1", "THOC6", "TK1", "TLN1", "TMX1", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRAF2", "TRIM21", "TRIM25", "TRIM28", "TRIM33", "TRIP13", "TSFM", "TSPAN3", "TSPAN6", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UHRF1", "USP10", "USP11", "USP14", "USP24", "USP28", "USP34", "USP47", "USP48", "USP5", "USP7", "USP8", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VAT1", "VCL", "VCP", "VIM", "VPS4A", "VPS4B", "WARS", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR41", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2"], "leading_proteins": ["ABCB7", "ACBD3", "ALDH3A2", "APP", "CBX1", "CBX2", "CBX5", "DNM2", "HADHA", "HMOX2", "HSD17B12", "INA", "KDSR", "KIF18B", "KIF22", "MCM2", "MCM3", "MCM4", "MCM6", "MCM7", "MRPS11", "MRPS5", "MTOR", "NEFL", "P4HB", "PFN2", "PIK3C2A", "POLA1", "POLR2B", "PSMB2", "PSMB6", "PSMB7", "STX18", "TMX4", "TSPAN6", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TXNDC12", "TXNL1", "VIM"]}
|
interpro_domain/advanced/idx2term.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
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{"0": "Tubulin/FtsZ, GTPase domain [IPR003008]", "1": "Tubulin/FtsZ, 2-layer sandwich domain [IPR018316]"}
|
interpro_domain/advanced/plot_0.png
ADDED
|
Git LFS Details
|
interpro_domain/advanced/plot_1.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/idx2term.json
ADDED
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| 1 |
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{"0": "Tubulin/FtsZ, GTPase domain [IPR003008]", "1": "Tubulin/FtsZ, 2-layer sandwich domain [IPR018316]", "2": "RNA recognition motif domain [IPR000504]", "3": "MCM, AAA-lid domain [IPR041562]", "4": "MCM domain [IPR001208]", "5": "MCM N-terminal domain [IPR027925]", "6": "MCM OB domain [IPR033762]"}
|
interpro_domain/basic/plot_0.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_1.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_2.png
ADDED
|
Git LFS Details
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interpro_domain/basic/plot_3.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_4.png
ADDED
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Git LFS Details
|
interpro_domain/basic/plot_5.png
ADDED
|
Git LFS Details
|
interpro_domain/basic/plot_6.png
ADDED
|
Git LFS Details
|
interpro_domain/consensus.joblib
ADDED
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| 1 |
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version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8f3f28d153e42c547bfa0bbaa179d8cc41101a23e7e2a87c81dca2269e5a6e06
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| 3 |
+
size 90598
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interpro_domain/df_merge.tsv
ADDED
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| 1 |
+
term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
| 2 |
+
Tubulin/FtsZ, GTPase domain [IPR003008] 5 6 2.8312668735707787 0.0046364018299505 3.6140776699029127 5.883495145631068 0.537603280896448 0.3771225437200781 1.6631634011190108 1.117390952728082 1.2199662970774952 0.3090115161057067 1.7805540506852606e-06 1.8108482464958843e-10 1.2912404950479516e-08 2.765770662469611e-06 0.0001429815632908
|
| 3 |
+
Tubulin/FtsZ, 2-layer sandwich domain [IPR018316] 5 6 2.8312668735707787 0.0046364018299505 3.6140776699029127 5.883495145631068 0.537603280896448 0.3771225437200781 1.6631634011190108 1.117390952728082 1.2199662970774952 0.3090115161057067 1.2096464196687304e-06 1.2117172578108348e-10 8.676815030932978e-09 1.8818469985730976e-06 9.937036022358197e-05
|
| 4 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 3 5 2.331166149936524 0.0197446003021508 2.813106796116505 6.104368932038835 1.6405397264547834 0.1100883340733615 1.2852875686886795 0.8042848477475721 1.100790504333474 0.1612592696854457 0.0001064841286758 0.0015075035399645 0.0058956460302812 0.000142755965642 0.0019884945269669
|
| 5 |
+
P-type ATPase, haloacid dehalogenase domain [IPR044492] 4 5 2.138175756367449 0.0325024812507388 2.941747572815534 6.145631067961165 0.9567723497044874 0.2732808833570771 1.8358630293390923 1.459204245106796 1.2102525517005158 0.2943240638910574 0.3936330765223108 1.0 1.0 0.4172977923286156 0.0034992238505004
|
interpro_domain/metrics.json
ADDED
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| 1 |
+
{
|
| 2 |
+
"type_of_task": "ranksum",
|
| 3 |
+
"signature_size": 2644,
|
| 4 |
+
"annotations_size": 2312,
|
| 5 |
+
"title": "Average number of proteins per term",
|
| 6 |
+
"value": 2.0666089965397925
|
| 7 |
+
}
|
interpro_domain/paths.json
ADDED
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| 1 |
+
{"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C198/C198_val_log2fc"}
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interpro_domain/result.tsv
ADDED
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|
| 1 |
+
Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
|
| 2 |
+
Tubulin/FtsZ, GTPase domain [IPR003008] 0.9878695981804388 2.8312668735707787 0.0046364018299505 0.9999784317393886 0.8047152360846115 6 Q9BVA1,P07437,Q13885,P68371,P04350 5
|
| 3 |
+
Tubulin/FtsZ, 2-layer sandwich domain [IPR018316] 0.9878695981804388 2.8312668735707787 0.0046364018299505 0.9999784317393886 0.8047152360846115 6 Q9BVA1,P07437,Q13885,P68371,P04350 5
|
| 4 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.8976098721747645 2.331166149936524 0.0197446003021508 1.0 0.8047152360846115 5 O43169,O00264,O15173 3
|
| 5 |
+
P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.8507010231148188 2.138175756367449 0.0325024812507388 1.0 0.8047152360846115 5 Q9HD20,P16615,P35670,P05023 4
|
| 6 |
+
ABC transporter type 1, transmembrane domain [IPR011527] 0.8941637378619121 1.9190553800675252 0.0549773255506031 1.0 0.8047152360846115 3 O75027 1
|
| 7 |
+
TRAM/LAG1/CLN8 homology domain [IPR006634] 0.8936009087466921 1.916781615529747 0.0552656815038599 1.0 0.8047152360846115 3 Q96G23,Q15629 2
|
| 8 |
+
FAD dependent oxidoreductase [IPR006076] 0.8878908396833805 1.8936916759890112 0.0582659468510002 1.0 0.8047152360846115 3 Q96CU9 1
|
| 9 |
+
Zinc finger, CHHC-type [IPR012996] 0.8799697084437716 1.861595887180489 0.0626600734596789 1.0 0.8047152360846115 3 P31943,P52597 2
|
| 10 |
+
GOLD domain [IPR009038] 0.7501073857993159 1.836129795899257 0.0663384625186453 1.0 0.8047152360846115 6 Q9Y3A6,P49755,Q15363,Q9Y3B3 4
|
| 11 |
+
SET domain [IPR001214] 0.853697216055886 1.7546318282241915 0.0793223036064301 1.0 0.8047152360846115 3 Q03164 1
|
| 12 |
+
Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.8500567966679318 1.7397525317112656 0.0819024808006405 1.0 0.8047152360846115 3 P16615,P05023 2
|
| 13 |
+
Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.8500567966679318 1.7397525317112656 0.0819024808006405 1.0 0.8047152360846115 3 P16615,P05023 2
|
| 14 |
+
Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.6686878094285698 1.4687068037545394 0.1419123312611527 1.0 0.8047152360846115 6 Q9H4M9,Q9H223,O60313,O95140 4
|
| 15 |
+
Dynamin, N-terminal [IPR045063] 0.6686878094285698 1.4687068037545394 0.1419123312611527 1.0 0.8047152360846115 6 Q9H4M9,Q9H223,O60313,O95140 4
|
| 16 |
+
CBS domain [IPR000644] 0.6675247904114112 1.463376004569021 0.1433645208471412 1.0 0.8047152360846115 6 P51790 1
|
| 17 |
+
ERAP1-like C-terminal domain [IPR024571] 0.7819007951533556 1.4591750952836977 0.144516921584572 1.0 0.8047152360846115 3 P55786,Q9NZ08 2
|
| 18 |
+
Aminopeptidase N-like , N-terminal domain [IPR045357] 0.6789391810905095 1.3988212496298646 0.1618665924119229 1.0 0.8047152360846115 5 P55786,Q9NZ08 2
|
| 19 |
+
Peptidase M1, membrane alanine aminopeptidase [IPR014782] 0.6789391810905095 1.3988212496298646 0.1618665924119229 1.0 0.8047152360846115 5 P55786,Q9NZ08 2
|
| 20 |
+
Phospholipase D/Transphosphatidylase [IPR001736] 0.9666919000756996 1.3900925053223518 0.1645007888469867 1.0 0.8047152360846115 2 Q8IV08 1
|
| 21 |
+
Major facilitator superfamily domain [IPR020846] 0.7633283911168092 1.3822974362980844 0.1668803928518949 1.0 0.8047152360846115 3 P53985 1
|
| 22 |
+
START domain [IPR002913] 0.7625899280575639 1.3792394852503322 0.1678209276125868 1.0 0.8047152360846115 3 Q9Y5P4,Q9NQZ5 2
|
| 23 |
+
Beta-Casp domain [IPR022712] 0.7403887138556309 1.2873167316417 0.197983914075118 1.0 0.8207292038788845 3 Q9NV88 1
|
| 24 |
+
Longin domain [IPR010908] 0.739113971980316 1.2820414777936888 0.1998280964121535 1.0 0.8220686101510656 3 P51809,O75396 2
|
| 25 |
+
v-SNARE, coiled-coil homology domain [IPR042855] 0.739113971980316 1.2820414777936888 0.1998280964121535 1.0 0.8220686101510656 3 P51809,O75396 2
|
| 26 |
+
Guanylate kinase/L-type calcium channel beta subunit [IPR008145] 0.7286306791069426 1.2386825605459273 0.215463079588182 1.0 0.8439174614434278 3 Q9NZW5 1
|
| 27 |
+
Guanylate kinase-like domain [IPR008144] 0.7286306791069426 1.2386825605459273 0.215463079588182 1.0 0.8439174614434278 3 Q9NZW5 1
|
| 28 |
+
Post-SET domain [IPR003616] 0.922028766086298 1.2221566601756753 0.2216483897761723 1.0 0.8504039129828902 2 Q03164 1
|
| 29 |
+
Cyclic nucleotide-binding domain [IPR000595] 0.6587834001190334 1.206351609279661 0.2276819460424008 1.0 0.8504039129828902 4 Q6P4Q7,P10644 2
|
| 30 |
+
Reticulon [IPR003388] 0.9174867524602554 1.2051616315214435 0.2281409110888668 1.0 0.8504039129828902 2 O95197 1
|
| 31 |
+
FAD-binding domain, PCMH-type [IPR016166] 0.9171082513247524 1.2037463120214138 0.2286876462830891 1.0 0.8504039129828902 2 Q15392 1
|
| 32 |
+
FAD linked oxidase, N-terminal [IPR006094] 0.9171082513247524 1.2037463120214138 0.2286876462830891 1.0 0.8504039129828902 2 Q15392 1
|
| 33 |
+
Phospholipid/glycerol acyltransferase [IPR002123] 0.6055940685251364 1.1771549094124445 0.239133682138299 1.0 0.8628712441006924 6 Q92604,Q9HCL2 2
|
| 34 |
+
Intermediate filament head, DNA-binding domain [IPR006821] 0.6489995168833398 1.1648102086856649 0.2440958256527008 1.0 0.8660582571562742 4 P07196,P08670 2
|
| 35 |
+
BTB/POZ domain [IPR000210] 0.7092010602044698 1.1584965878568 0.2466614433178711 1.0 0.8661429442756001 3 Q9NXV2,Q08380 2
|
| 36 |
+
MHC class I, alpha chain, C-terminal [IPR010579] 0.7073078379401788 1.1507001065917657 0.2498556326686982 1.0 0.8673749762100784 3 P10321,P04439 2
|
| 37 |
+
MHC class I alpha chain, alpha1 alpha2 domains [IPR001039] 0.7073078379401788 1.1507001065917657 0.2498556326686982 1.0 0.8673749762100784 3 P10321,P04439 2
|
| 38 |
+
Transcription factor CBF/NF-Y/archaeal histone domain [IPR003958] 0.6412878787878851 1.1321106655907125 0.2575879114085504 1.0 0.8673749762100784 4 Q9NRG0,Q01658,Q9NR33 3
|
| 39 |
+
3-hydroxyacyl-CoA dehydrogenase, NAD binding [IPR006176] 0.8966691900075685 1.127563655195038 0.2595042432168946 1.0 0.8673749762100784 2 P40939 1
|
| 40 |
+
3-hydroxyacyl-CoA dehydrogenase, C-terminal [IPR006108] 0.8966691900075685 1.127563655195038 0.2595042432168946 1.0 0.8673749762100784 2 P40939 1
|
| 41 |
+
ABC transporter-like, ATP-binding domain [IPR003439] 0.5972794556132747 1.1243947481668586 0.2608455990530998 1.0 0.8673749762100784 7 O75027 1
|
| 42 |
+
Marvel domain [IPR008253] 0.8830431491294456 1.0770917875139308 0.2814392616363315 1.0 0.8689838449651057 2 O43760 1
|
| 43 |
+
Peptidase C1A, papain C-terminal [IPR000668] 0.8807721423164265 1.0687087628960836 0.2852009217210449 1.0 0.8703395198377454 2 P53634 1
|
| 44 |
+
Peptidase M16, C-terminal [IPR007863] 0.5806938777966174 1.0469558802941656 0.2951199272317997 1.0 0.872997867390542 7 Q10713 1
|
| 45 |
+
Peptidase M16, N-terminal [IPR011765] 0.5806938777966174 1.0469558802941656 0.2951199272317997 1.0 0.872997867390542 7 Q10713 1
|
| 46 |
+
Zinc finger C2H2 AKAP95-type [IPR034736] 0.6811813706929208 1.0435569124099098 0.2966904366657286 1.0 0.872997867390542 3 Q9ULX6,Q5BKZ1 2
|
| 47 |
+
Flavoprotein pyridine nucleotide cytochrome reductase [IPR001709] 0.6754020207424749 1.019997519274433 0.3077296372655504 1.0 0.8740429009311458 3 P16435 1
|
| 48 |
+
Oxidoreductase FAD/NAD(P)-binding [IPR001433] 0.6754020207424749 1.019997519274433 0.3077296372655504 1.0 0.8740429009311458 3 P16435 1
|
| 49 |
+
FAD-binding domain, ferredoxin reductase-type [IPR017927] 0.6754020207424749 1.019997519274433 0.3077296372655504 1.0 0.8740429009311458 3 P16435 1
|
| 50 |
+
NOPS [IPR012975] 0.6702006815600239 0.9988486244430984 0.3178680269905207 1.0 0.8897226130775836 3 Q15233,Q8WXF1 2
|
| 51 |
+
JmjC domain [IPR003347] 0.6054511724738199 0.9810355940538246 0.3265751891754798 1.0 0.8973865581957499 4 Q9NWT6 1
|
| 52 |
+
GPAT/DHAPAT, acyltransferase domain [IPR041728] 0.8538985616956833 0.9702599903366848 0.3319169149057257 1.0 0.8985853715012153 2 Q9HCL2 1
|
| 53 |
+
Glycerol-3-phosphate acyltransferase-like, C-terminal domain [IPR045520] 0.8538985616956833 0.9702599903366848 0.3319169149057257 1.0 0.8985853715012153 2 Q9HCL2 1
|
| 54 |
+
Acyl-CoA oxidase, C-terminal [IPR002655] 0.8504920514761545 0.9578925367268596 0.3381169502322101 1.0 0.9014927799632384 2 O15254 1
|
| 55 |
+
Tim44-like domain [IPR007379] 0.8417865253595753 0.9264183924267598 0.3542285894355892 1.0 0.9014927799632384 2 O43615 1
|
| 56 |
+
Heterogeneous nuclear ribonucleoprotein Q acidic domain [IPR041337] 0.8402725208175621 0.9209648650069988 0.3570687710113598 1.0 0.9014927799632384 2 O60506 1
|
| 57 |
+
Band 7 domain [IPR001107] 0.5560803083433555 0.9179657406187858 0.3586368020916599 1.0 0.9014927799632384 8 Q9UJZ1,Q14254,O75477,P27105 4
|
| 58 |
+
Intermediate filament, rod domain [IPR039008] 0.5529813307579957 0.9035130467324692 0.366253667083442 1.0 0.9014927799632384 8 Q16352,P07196,P08670 3
|
| 59 |
+
ATPase family AAA domain-containing protein 3, N-terminal [IPR021911] 0.8342165026495076 0.8992141009811045 0.3685386308687484 1.0 0.9014927799632384 2 Q9NVI7 1
|
| 60 |
+
CYRIA/CYRIB, Rac1 binding domain [IPR009828] 0.8315669947009832 0.8897311101198655 0.373610285062897 1.0 0.9014927799632384 2 Q9NUQ9 1
|
| 61 |
+
CARG-binding factor, N-terminal [IPR012956] 0.8277819833459494 0.876220235449815 0.3809103178844966 1.0 0.9081079916367087 2 Q99729 1
|
| 62 |
+
RBM3/CIRBP, RNA recognition motif [IPR034278] 0.8243754731264188 0.8640980854847736 0.3875340106440199 1.0 0.912355406882491 2 P98179 1
|
| 63 |
+
FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 0.536422118869543 0.8125037233027192 0.4165026509922898 1.0 0.933095086331564 9 Q9Y680 1
|
| 64 |
+
Zinc finger, CCHC-type [IPR001878] 0.5220271395438512 0.7747411359068065 0.4384926384303953 1.0 0.9540752232434244 7 Q9NUD5 1
|
| 65 |
+
Metallo-beta-lactamase [IPR001279] 0.5516049009877348 0.7594918248221101 0.4475584026034891 1.0 0.96345905662874 4 Q9NV88 1
|
| 66 |
+
LEM domain [IPR003887] 0.5121669620282076 0.7448365587863042 0.4563705310289556 1.0 0.9686734303050736 6 P50402,Q86XL3 2
|
| 67 |
+
DNA2/NAM7 helicase-like, C-terminal [IPR041679] 0.5474101259592792 0.7426695602986034 0.4576817631922569 1.0 0.9690112055865366 4 Q9HCE1 1
|
| 68 |
+
Zinc finger, RanBP2-type [IPR001876] 0.5153951354060851 0.7296629978405723 0.4655962041327721 1.0 0.9731609378011988 8 Q01844,P35637 2
|
| 69 |
+
FAD/NAD(P)-binding domain [IPR023753] 0.535891335402572 0.6969080051441402 0.4858603676819593 1.0 0.9863551337066732 4 P00390 1
|
| 70 |
+
G-patch domain [IPR000467] 0.5141462174652753 0.6695541543530433 0.5031420477667412 1.0 0.986934788909128 12 Q8IWZ8 1
|
| 71 |
+
Amyloidogenic glycoprotein, E2 domain [IPR024329] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.986934788909128 2 P05067 1
|
| 72 |
+
Pancreatic trypsin inhibitor Kunitz domain [IPR002223] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.986934788909128 2 P05067 1
|
| 73 |
+
Beta-amyloid precursor protein C-terminal [IPR019543] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.986934788909128 2 P05067 1
|
| 74 |
+
Amyloidogenic glycoprotein, copper-binding [IPR011178] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.986934788909128 2 P05067 1
|
| 75 |
+
Amyloidogenic glycoprotein, extracellular [IPR008154] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.986934788909128 2 P05067 1
|
| 76 |
+
Amyloidogenic glycoprotein, heparin-binding [IPR015849] 0.7668433005298967 0.6659533487800751 0.5054409193862486 1.0 0.986934788909128 2 P05067 1
|
| 77 |
+
Peptidase M41 [IPR000642] 0.7581377744133209 0.6372846668829686 0.5239394366489387 1.0 0.989225794594602 2 Q96TA2 1
|
| 78 |
+
EH domain-containing protein, N-terminal [IPR031692] 0.7547312641937898 0.6261782504952337 0.5311980312948126 1.0 0.989225794594602 2 Q9H4M9 1
|
| 79 |
+
Domain of unknown function DUF5600 [IPR040990] 0.7547312641937898 0.6261782504952337 0.5311980312948126 1.0 0.989225794594602 2 Q9H4M9 1
|
| 80 |
+
Dynamin, GTPase domain [IPR001401] 0.5679359166406026 0.6014395427097607 0.5475472679378623 1.0 0.998052138556834 3 O60313 1
|
| 81 |
+
Major sperm protein (MSP) domain [IPR000535] 0.5660734570238475 0.5946901665391201 0.5520505961426057 1.0 0.998052138556834 3 Q8NHP6,Q9P0L0 2
|
| 82 |
+
Fxr1, tudor domain [IPR041560] 0.5645588792124138 0.5892192141658588 0.5557142294767601 1.0 0.998052138556834 3 Q06787,P51116 2
|
| 83 |
+
Fragile X-related 1 protein, C-terminal core [IPR022034] 0.5645588792124138 0.5892192141658588 0.5557142294767601 1.0 0.998052138556834 3 Q06787,P51116 2
|
| 84 |
+
Synaptic functional regulator FMRP, KH0 domain [IPR040472] 0.5645588792124138 0.5892192141658588 0.5557142294767601 1.0 0.998052138556834 3 Q06787,P51116 2
|
| 85 |
+
Agenet-like domain [IPR008395] 0.5645588792124138 0.5892192141658588 0.5557142294767601 1.0 0.998052138556834 3 Q06787,P51116 2
|
| 86 |
+
Far upstream element-binding protein, C-terminal [IPR015096] 0.7342922028766052 0.5609655131459327 0.5748210474234763 1.0 0.998052138556834 2 Q92945 1
|
| 87 |
+
Ribosomal protein S5, N-terminal [IPR013810] 0.7316426949280814 0.5527019830465326 0.5804674952369027 1.0 0.998052138556834 2 P82675 1
|
| 88 |
+
Ribosomal protein S5, C-terminal [IPR005324] 0.7316426949280814 0.5527019830465326 0.5804674952369027 1.0 0.998052138556834 2 P82675 1
|
| 89 |
+
Thiamine pyrophosphate enzyme, central domain [IPR012000] 0.7312641937925768 0.5515252233697475 0.5812736806808512 1.0 0.998052138556834 2 A1L0T0 1
|
| 90 |
+
Thiamine pyrophosphate enzyme, C-terminal TPP-binding [IPR011766] 0.7312641937925768 0.5515252233697475 0.5812736806808512 1.0 0.998052138556834 2 A1L0T0 1
|
| 91 |
+
Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain [IPR012001] 0.7312641937925768 0.5515252233697475 0.5812736806808512 1.0 0.998052138556834 2 A1L0T0 1
|
| 92 |
+
Chromo shadow domain [IPR008251] 0.5531995456266482 0.5487161323089763 0.5832002733823916 1.0 0.998052138556834 3 P83916,P45973 2
|
| 93 |
+
Chromo domain subgroup [IPR017984] 0.5531995456266482 0.5487161323089763 0.5832002733823916 1.0 0.998052138556834 3 P83916,P45973 2
|
| 94 |
+
Lamin tail domain [IPR001322] 0.5490344566452038 0.5341103747787243 0.5932651722491031 1.0 0.998052138556834 3 P20700,Q03252 2
|
| 95 |
+
Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain [IPR044862] 0.7252081756245232 0.5328268563769756 0.5941534411857421 1.0 0.998052138556834 2 P13674 1
|
| 96 |
+
Acyl transferase [IPR014043] 0.7240726722180132 0.529348543636517 0.5965636865287456 1.0 0.998052138556834 2 P49327 1
|
| 97 |
+
GNAT domain [IPR000182] 0.4903026652524147 0.5236431035810843 0.6005267956793172 1.0 0.998052138556834 4 Q9H9T3 1
|
| 98 |
+
NLE [IPR012972] 0.7134746404239174 0.4973206216873103 0.6189629719097134 1.0 0.998052138556834 2 Q9GZL7 1
|
| 99 |
+
Potassium channel tetramerisation-type BTB domain [IPR003131] 0.7089326267978764 0.4838435616137804 0.628496896934114 1.0 0.998052138556834 2 Q9NXV2 1
|
| 100 |
+
Proteasome activator PA28, N-terminal domain [IPR003185] 0.5324495110279128 0.4773752018195714 0.633094969392072 1.0 0.998052138556834 3 P61289 1
|
| 101 |
+
Proteasome activator PA28, C-terminal domain [IPR003186] 0.5324495110279128 0.4773752018195714 0.633094969392072 1.0 0.998052138556834 3 P61289 1
|
| 102 |
+
Chitinase II [IPR011583] 0.7002271006812979 0.4584498905911636 0.6466292552665196 1.0 0.998052138556834 2 Q01459 1
|
| 103 |
+
Glycoside hydrolase family 18, catalytic domain [IPR001223] 0.7002271006812979 0.4584498905911636 0.6466292552665196 1.0 0.998052138556834 2 Q01459 1
|
| 104 |
+
Peptidase M3A/M3B catalytic domain [IPR001567] 0.5191215448693584 0.4335785566447307 0.6645945090994112 1.0 0.998052138556834 3 Q9BYT8,Q99797 2
|
| 105 |
+
Ubiquitin system component CUE [IPR003892] 0.4640222337310159 0.4312517906010056 0.6662852999225417 1.0 0.998052138556834 4 Q9Y679 1
|
| 106 |
+
Immunoglobulin-like domain [IPR007110] 0.4471305566524076 0.4284482724173097 0.6683247862547517 1.0 0.998052138556834 8 P35613,Q13308,P10321,P04439 4
|
| 107 |
+
Class II aldolase/adducin N-terminal [IPR001303] 0.6858440575321678 0.4178191024405558 0.6760793832657539 1.0 0.998052138556834 2 P35611 1
|
| 108 |
+
SCP2 sterol-binding domain [IPR003033] 0.5054903445664441 0.3906175950239973 0.6960799179956827 1.0 0.998052138556834 3 P22307,Q6YN16 2
|
| 109 |
+
Alcohol dehydrogenase-like, C-terminal [IPR013149] 0.4268176692768295 0.3749712902680634 0.7076818184896163 1.0 0.998052138556834 6 Q8N4Q0,Q8N8N7 2
|
| 110 |
+
Glycoside hydrolase family 2, catalytic domain [IPR006103] 0.6680545041635073 0.370008883476151 0.7113758713615645 1.0 0.998052138556834 2 P08236 1
|
| 111 |
+
PB1 domain [IPR000270] 0.6612414837244458 0.3524580004594146 0.7244948108774252 1.0 0.998052138556834 2 Q92734 1
|
| 112 |
+
Rho GTPase-activating protein domain [IPR000198] 0.4914804998106805 0.3485671663032226 0.7274142809832491 1.0 0.998052138556834 3 Q9H0H5,Q68EM7 2
|
| 113 |
+
Serine hydroxymethyltransferase-like domain [IPR039429] 0.6585919757759219 0.3457506291806103 0.729530131497762 1.0 0.998052138556834 2 P34897 1
|
| 114 |
+
Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain [IPR008333] 0.6566994700984048 0.3410006993675414 0.7331030552415119 1.0 0.998052138556834 2 P00387 1
|
| 115 |
+
OCRE domain [IPR041591] 0.6506434519303501 0.3260338592059913 0.744398737620007 1.0 0.998052138556834 2 P98175 1
|
| 116 |
+
XPC-binding domain [IPR015360] 0.6502649507948468 0.3251103362055138 0.7450975663741366 1.0 0.998052138556834 2 P54725 1
|
| 117 |
+
RAD23A/RAD23B, UBA1 domain [IPR041811] 0.6502649507948468 0.3251103362055138 0.7450975663741366 1.0 0.998052138556834 2 P54725 1
|
| 118 |
+
Rpn11/EIF3F, C-terminal [IPR024969] 0.4299242424242525 0.3222723603814608 0.7472463702757322 1.0 0.998052138556834 4 P51665,Q7L5N1,O00303 3
|
| 119 |
+
Domain of unknown function DUF4217 [IPR025313] 0.6404239212717577 0.301599582824532 0.7629573260503268 1.0 0.998052138556834 2 Q13206 1
|
| 120 |
+
APC10/DOC domain [IPR004939] 0.6377744133232339 0.2954368775629968 0.7676601656010482 1.0 0.998052138556834 2 Q9UM13 1
|
| 121 |
+
NAD-dependent epimerase/dehydratase [IPR001509] 0.6347464042392067 0.2884819827378015 0.7729778202588979 1.0 0.998052138556834 2 Q9NRG7 1
|
| 122 |
+
DNA-directed DNA polymerase, family B, multifunctional domain [IPR006134] 0.4680045437334217 0.2833553257778151 0.7769044704172123 1.0 0.998052138556834 3 P28340,P09884 2
|
| 123 |
+
DNA-directed DNA polymerase, family B, exonuclease domain [IPR006133] 0.4680045437334217 0.2833553257778151 0.7769044704172123 1.0 0.998052138556834 3 P28340,P09884 2
|
| 124 |
+
Legume-like lectin [IPR005052] 0.6290688872066554 0.2756978568992377 0.7827801418090607 1.0 0.998052138556834 2 Q12907 1
|
| 125 |
+
HDGF-related, PWWP domain [IPR035496] 0.4611889435819609 0.2657431598949369 0.7904370213081886 1.0 0.998052138556834 3 Q7Z4V5,P51858 2
|
| 126 |
+
Heat shock protein DnaJ, cysteine-rich domain [IPR001305] 0.4589170768648141 0.2600103617695588 0.7948557808828571 1.0 0.998052138556834 3 Q96EY1,O60884 2
|
| 127 |
+
Zinc finger, ZZ-type [IPR000433] 0.6218773656320903 0.2599912750191975 0.7948705037640966 1.0 0.998052138556834 2 Q13501 1
|
| 128 |
+
Amino acid permease/ SLC12A domain [IPR004841] 0.6192278576835665 0.25434346460442 0.7992302236588376 1.0 0.998052138556834 2 P55011 1
|
| 129 |
+
SLC12A transporter, C-terminal [IPR018491] 0.6192278576835665 0.25434346460442 0.7992302236588376 1.0 0.998052138556834 2 P55011 1
|
| 130 |
+
Brix domain [IPR007109] 0.4041666666666736 0.2497841621520615 0.8027542683646598 1.0 0.998052138556834 4 Q9NQ55,Q9H7B2,Q96G21 3
|
| 131 |
+
RNA recognition motif domain [IPR000504] 0.2624776594242915 0.2444971540761666 0.8068458058230381 1.0 0.998052138556834 100 Q8IXT5,Q01085,Q07955,Q13151,Q9UHX1,P43243,P07910,Q96PK6,P52597,Q9BWF3,P98179,Q01844,O43390,Q13595,Q8IY67,P31942,P62995,P55795,Q92804,Q14103,Q9GZT3,Q14011,O60506,Q15233,P51991,P38159,P22626,O14979,P35637,P31943,Q99729,Q8WXF1 32
|
| 132 |
+
Tudor domain [IPR002999] 0.3813914059895795 0.2046213001934429 0.8378680123623719 1.0 0.998052138556834 6 Q14739,Q16637 2
|
| 133 |
+
YTH domain [IPR007275] 0.3836170535383071 0.1988766712316062 0.842359218648828 1.0 0.998052138556834 4 Q9H6S0 1
|
| 134 |
+
Kinesin motor domain [IPR001752] 0.3958925074788286 0.1748964879959942 0.8611609699154161 1.0 0.998052138556834 12 Q86Y91,Q14807 2
|
| 135 |
+
SKP1 component, POZ domain [IPR016073] 0.57532172596517 0.1719712786593248 0.8634601088850511 1.0 0.998052138556834 2 Q15369 1
|
| 136 |
+
Fragile X-related 1 protein, C-terminal region 1 [IPR032172] 0.5643451930355722 0.1547403082007564 0.877026051351993 1.0 0.998052138556834 2 P51116 1
|
| 137 |
+
Phosphatidylinositol 3-/4-kinase, catalytic domain [IPR000403] 0.4051495645588769 0.1456432558777058 0.8842030187923291 1.0 0.998052138556834 3 P42345,O00443 2
|
| 138 |
+
CTP synthase GATase domain [IPR033828] 0.5556396669189939 0.1420299883417553 0.8870563185243696 1.0 0.998052138556834 2 Q9NRF8 1
|
| 139 |
+
CTP synthase, N-terminal [IPR017456] 0.5556396669189939 0.1420299883417553 0.8870563185243696 1.0 0.998052138556834 2 Q9NRF8 1
|
| 140 |
+
Immunoglobulin C1-set [IPR003597] 0.3540855681534577 0.1373525908877506 0.8907521027850167 1.0 0.998052138556834 4 P10321,P04439 2
|
| 141 |
+
MHC class I-like antigen recognition-like [IPR011161] 0.3540855681534577 0.1373525908877506 0.8907521027850167 1.0 0.998052138556834 4 P10321,P04439 2
|
| 142 |
+
GUCT [IPR012562] 0.5514761544284577 0.1362476043125672 0.891625543213675 1.0 0.998052138556834 2 Q9NR30 1
|
| 143 |
+
Acyl-CoA-binding protein, ACBP [IPR000582] 0.5393641180923456 0.1205029148092209 0.9040847707884324 1.0 0.998052138556834 2 Q9H3P7 1
|
| 144 |
+
PTBP1, RNA recognition motif 2-like [IPR021790] 0.3367424242424333 0.1078010981387636 0.9141534717793988 1.0 0.998052138556834 4 Q9UKA9,P14866,Q8WVV9 3
|
| 145 |
+
Ribosomal protein S10 domain [IPR027486] 0.5083270249810683 0.0871986957977275 0.9305135760121748 1.0 0.998052138556834 2 Q96GC5 1
|
| 146 |
+
Peptidase M20, dimerisation domain [IPR011650] 0.5030280090840173 0.082472342128872 0.934271111177584 1.0 0.998052138556834 2 Q8IYS1 1
|
| 147 |
+
DZF domain [IPR006561] 0.3178030303030367 0.0810155654703719 0.9354295737406776 1.0 0.998052138556834 4 Q96SI9,Q12906,Q96KR1 3
|
| 148 |
+
Heat shock chaperonin-binding [IPR006636] 0.3563044301400977 0.0780510136089797 0.9377874737340072 1.0 0.998052138556834 3 P54725,P54727 2
|
| 149 |
+
Oxoglutarate/iron-dependent dioxygenase [IPR005123] 0.3136363636363684 0.0758674915475147 0.939524520280926 1.0 0.998052138556834 4 O00469,P13674,Q32P28 3
|
| 150 |
+
Prolyl 4-hydroxylase, alpha subunit [IPR006620] 0.3136363636363684 0.0758674915475147 0.939524520280926 1.0 0.998052138556834 4 O00469,P13674,Q32P28 3
|
| 151 |
+
Hotdog acyl-CoA thioesterase (ACOT)-type domain [IPR033120] 0.4943224829674431 0.0752770794490132 0.9399942576798496 1.0 0.998052138556834 2 Q9Y305 1
|
| 152 |
+
Ribosomal S6 kinase, N-terminal catalytic domain [IPR041906] 0.4935654806964352 0.0746840278734945 0.940466116089099 1.0 0.998052138556834 2 Q15418 1
|
| 153 |
+
PABP, RNA recognition motif 2 [IPR045305] 0.4928084784254261 0.074096100312734 0.9409339182327452 1.0 0.998052138556834 2 Q13310 1
|
| 154 |
+
IPT domain [IPR002909] 0.4822104466313297 0.0663907277955119 0.9470667520645196 1.0 0.998052138556834 2 Q04206 1
|
| 155 |
+
Exocyst complex component EXOC2/Sec5, N-terminal domain [IPR039481] 0.4822104466313295 0.0663907277955116 0.9470667520645196 1.0 0.998052138556834 2 Q9UID3 1
|
| 156 |
+
GINS subunit, domain A [IPR021151] 0.4810749432248191 0.065621895556564 0.947678856550787 1.0 0.998052138556834 2 Q9BRX5 1
|
| 157 |
+
Gamma tubulin complex component protein, N-terminal [IPR041470] 0.4806964420893204 0.0653679970147265 0.9478810042463376 1.0 0.998052138556834 2 Q96CW5 1
|
| 158 |
+
Gamma tubulin complex component, C-terminal [IPR040457] 0.4806964420893204 0.0653679970147265 0.9478810042463376 1.0 0.998052138556834 2 Q96CW5 1
|
| 159 |
+
Glycoside hydrolase family 38, N-terminal domain [IPR000602] 0.4750189250567644 0.0616999969433231 0.950801742405306 1.0 0.998052138556834 2 Q16706 1
|
| 160 |
+
Glycosyl hydrolase family 38, C-terminal [IPR011682] 0.4750189250567644 0.0616999969433231 0.950801742405306 1.0 0.998052138556834 2 Q16706 1
|
| 161 |
+
Glycoside hydrolase family 38, central domain [IPR015341] 0.4750189250567644 0.0616999969433231 0.950801742405306 1.0 0.998052138556834 2 Q16706 1
|
| 162 |
+
Dynamin stalk domain [IPR000375] 0.4731264193792492 0.0605348128969317 0.9517296899960156 1.0 0.998052138556834 2 P50570 1
|
| 163 |
+
GTPase effector domain [IPR020850] 0.4731264193792492 0.0605348128969317 0.9517296899960156 1.0 0.998052138556834 2 P50570 1
|
| 164 |
+
Dynamin GTPase effector [IPR003130] 0.4731264193792492 0.0605348128969317 0.9517296899960156 1.0 0.998052138556834 2 P50570 1
|
| 165 |
+
Cyclin, C-terminal domain [IPR004367] 0.4602573807721311 0.0533371908674396 0.9574632483342032 1.0 0.998052138556834 2 P14635 1
|
| 166 |
+
Cyclin, N-terminal [IPR006671] 0.4602573807721311 0.0533371908674396 0.9574632483342032 1.0 0.998052138556834 2 P14635 1
|
| 167 |
+
Exportin-1/Importin-beta-like [IPR013598] 0.2863636363636386 0.0483582620732004 0.961430722404292 1.0 0.998052138556834 4 O14980,O43592,Q9HAV4 3
|
| 168 |
+
CAP Gly-rich domain [IPR000938] 0.2859848484848509 0.0480473801207343 0.961678482309586 1.0 0.998052138556834 4 Q14203,P30622,Q99426 3
|
| 169 |
+
GRAM domain [IPR004182] 0.4473883421650188 0.0473162752351893 0.9622611568487014 1.0 0.998052138556834 2 Q66K14 1
|
| 170 |
+
Peptidase S9, prolyl oligopeptidase, catalytic domain [IPR001375] 0.2844696969697012 0.0468221155893605 0.9626550026704276 1.0 0.998052138556834 4 Q4J6C6,P13798,Q86TI2 3
|
| 171 |
+
Circularly permuted (CP)-type guanine nucleotide-binding (G) domain [IPR030378] 0.2780303030303092 0.0419337556528261 0.966551506935888 1.0 0.998052138556834 4 P36915,Q9NVN8,Q13823 3
|
| 172 |
+
G-protein, beta subunit [IPR001632] 0.4299772899318651 0.0408195387788984 0.9674397626466896 1.0 0.998052138556834 2 Q9NVX2 1
|
| 173 |
+
Pleckstrin homology domain, spectrin-type [IPR001605] 0.4250567751703196 0.039289171294381 0.9686598400069352 1.0 0.998052138556834 2 O15020 1
|
| 174 |
+
Pleckstrin homology domain 9 [IPR041681] 0.4250567751703196 0.039289171294381 0.9686598400069352 1.0 0.998052138556834 2 O15020 1
|
| 175 |
+
EF hand associated, type-2 [IPR013567] 0.4148372445117218 0.0364924340393356 0.9708897114548372 1.0 0.998052138556834 2 Q8IXI2 1
|
| 176 |
+
MIRO domain [IPR020860] 0.4148372445117218 0.0364924340393356 0.9708897114548372 1.0 0.998052138556834 2 Q8IXI2 1
|
| 177 |
+
EF hand associated, type-1 [IPR013566] 0.4148372445117218 0.0364924340393356 0.9708897114548372 1.0 0.998052138556834 2 Q8IXI2 1
|
| 178 |
+
MCM, AAA-lid domain [IPR041562] 0.324109173616369 0.0350241580021306 0.9720604773882138 1.0 0.998052138556834 6 P25205,P33991,P49736,Q14566,P33993 5
|
| 179 |
+
MCM domain [IPR001208] 0.324109173616369 0.0350241580021306 0.9720604773882138 1.0 0.998052138556834 6 P25205,P33991,P49736,Q14566,P33993 5
|
| 180 |
+
MCM N-terminal domain [IPR027925] 0.324109173616369 0.0350241580021306 0.9720604773882138 1.0 0.998052138556834 6 P25205,P33991,P49736,Q14566,P33993 5
|
| 181 |
+
MCM OB domain [IPR033762] 0.324109173616369 0.0350241580021306 0.9720604773882138 1.0 0.998052138556834 6 P25205,P33991,P49736,Q14566,P33993 5
|
| 182 |
+
FATC domain [IPR003152] 0.4049962149886381 0.0342401814837177 0.9726856251227638 1.0 0.998052138556834 2 P42345 1
|
| 183 |
+
PIK-related kinase [IPR014009] 0.4049962149886381 0.0342401814837177 0.9726856251227638 1.0 0.998052138556834 2 P42345 1
|
| 184 |
+
PIK-related kinase, FAT [IPR003151] 0.4049962149886381 0.0342401814837177 0.9726856251227638 1.0 0.998052138556834 2 P42345 1
|
| 185 |
+
Staufen, C-terminal [IPR032478] 0.2866338508140891 0.0322496403457983 0.9742729694744028 1.0 0.998052138556834 3 O75569,O95793 2
|
| 186 |
+
Methylglyoxal synthase-like domain [IPR011607] 0.376987130961382 0.0297506597820374 0.9762659091187752 1.0 0.998052138556834 2 P31939 1
|
| 187 |
+
Ku70/Ku80 beta-barrel domain [IPR006164] 0.3652535957607789 0.0285309792357821 0.977238660223806 1.0 0.998052138556834 2 P12956 1
|
| 188 |
+
Ku70/Ku80 C-terminal arm [IPR005160] 0.3652535957607789 0.0285309792357821 0.977238660223806 1.0 0.998052138556834 2 P12956 1
|
| 189 |
+
Ku70/Ku80, N-terminal alpha/beta [IPR005161] 0.3652535957607789 0.0285309792357821 0.977238660223806 1.0 0.998052138556834 2 P12956 1
|
| 190 |
+
Pentacotripeptide-repeat region of PRORP [IPR033443] 0.3266464799394334 0.0262802701494964 0.9790337916161492 1.0 0.998052138556834 2 P42704 1
|
| 191 |
+
Alanyl-tRNA synthetase, class IIc, core domain [IPR018165] 0.3228614685843992 0.0261606710494167 0.9791291850937632 1.0 0.998052138556834 2 Q5JTZ9 1
|
| 192 |
+
Alanyl-tRNA synthetase, class IIc, N-terminal [IPR018164] 0.3228614685843992 0.0261606710494167 0.9791291850937632 1.0 0.998052138556834 2 Q5JTZ9 1
|
| 193 |
+
Coatomer subunit gamma, C-terminal [IPR032154] 0.3186979560938616 0.0260435676010263 0.9792225883030105 1.0 0.998052138556834 2 Q9Y678 1
|
| 194 |
+
Coatomer, gamma subunit, appendage, Ig-like subdomain [IPR013040] 0.3186979560938616 0.0260435676010263 0.9792225883030105 1.0 0.998052138556834 2 Q9Y678 1
|
| 195 |
+
RNA polymerase Rpb2, domain 3 [IPR007645] 0.2967448902346636 0.0256234316012363 0.9795576964890328 1.0 0.998052138556834 2 P30876 1
|
| 196 |
+
RNA polymerase, beta subunit, protrusion [IPR007644] 0.2967448902346636 0.0256234316012363 0.9795576964890328 1.0 0.998052138556834 2 P30876 1
|
| 197 |
+
RNA polymerase Rpb2, domain 2 [IPR007642] 0.2967448902346636 0.0256234316012363 0.9795576964890328 1.0 0.998052138556834 2 P30876 1
|
| 198 |
+
RNA polymerase Rpb2, domain 7 [IPR007641] 0.2967448902346636 0.0256234316012363 0.9795576964890328 1.0 0.998052138556834 2 P30876 1
|
| 199 |
+
DNA-directed RNA polymerase, subunit 2, hybrid-binding domain [IPR007120] 0.2967448902346636 0.0256234316012363 0.9795576964890328 1.0 0.998052138556834 2 P30876 1
|
| 200 |
+
OBG-type guanine nucleotide-binding (G) domain [IPR031167] 0.2928488887225131 0.0062830905017732 0.9949868520787256 1.0 1.0 5 Q9NTK5 1
|
interpro_domain/selections.json
ADDED
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interpro_family/advanced/idx2term.json
ADDED
|
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|
|
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|
|
| 1 |
+
{"0": "Tubulin [IPR000217]", "1": "Beta tubulin [IPR002453]"}
|
interpro_family/advanced/plot_0.png
ADDED
|
Git LFS Details
|
interpro_family/advanced/plot_1.png
ADDED
|
Git LFS Details
|
interpro_family/basic/idx2term.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"0": "Tubulin [IPR000217]", "1": "Beta tubulin [IPR002453]", "2": "Mitochondrial carrier protein [IPR002067]", "3": "Short-chain dehydrogenase/reductase SDR [IPR002347]", "4": "Mini-chromosome maintenance protein [IPR031327]"}
|