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- interpro_active_site/advanced/idx2term.json +1 -0
- interpro_active_site/basic/idx2term.json +1 -0
- interpro_active_site/consensus.joblib +3 -0
- interpro_active_site/df_merge.tsv +1 -0
- interpro_active_site/metrics.json +7 -0
- interpro_active_site/paths.json +1 -0
- interpro_active_site/result.tsv +6 -0
- interpro_active_site/selections.json +1 -0
- interpro_binding_site/advanced/idx2term.json +1 -0
- interpro_binding_site/advanced/plot_0.png +3 -0
- interpro_binding_site/basic/idx2term.json +1 -0
- interpro_binding_site/basic/plot_0.png +3 -0
- interpro_binding_site/basic/plot_1.png +3 -0
- interpro_binding_site/consensus.joblib +3 -0
- interpro_binding_site/df_merge.tsv +2 -0
- interpro_binding_site/metrics.json +7 -0
- interpro_binding_site/paths.json +1 -0
- interpro_binding_site/result.tsv +4 -0
- interpro_binding_site/selections.json +1 -0
- interpro_conserved_site/advanced/idx2term.json +1 -0
- interpro_conserved_site/basic/idx2term.json +1 -0
- interpro_conserved_site/basic/plot_0.png +3 -0
- interpro_conserved_site/basic/plot_1.png +3 -0
- interpro_conserved_site/consensus.joblib +3 -0
- interpro_conserved_site/df_merge.tsv +1 -0
- interpro_conserved_site/metrics.json +7 -0
- interpro_conserved_site/paths.json +1 -0
- interpro_conserved_site/result.tsv +29 -0
- interpro_conserved_site/selections.json +1 -0
- interpro_domain/advanced/idx2term.json +1 -0
- interpro_domain/advanced/plot_0.png +3 -0
- interpro_domain/basic/idx2term.json +1 -0
- interpro_domain/basic/plot_0.png +3 -0
- interpro_domain/basic/plot_1.png +3 -0
- interpro_domain/basic/plot_2.png +3 -0
- interpro_domain/basic/plot_3.png +3 -0
- interpro_domain/basic/plot_4.png +3 -0
- interpro_domain/basic/plot_5.png +3 -0
- interpro_domain/basic/plot_6.png +3 -0
- interpro_domain/basic/plot_7.png +3 -0
- interpro_domain/basic/plot_8.png +3 -0
- interpro_domain/consensus.joblib +3 -0
- interpro_domain/df_merge.tsv +8 -0
- interpro_domain/metrics.json +7 -0
- interpro_domain/paths.json +1 -0
- interpro_domain/result.tsv +172 -0
- interpro_domain/selections.json +0 -0
- interpro_family/advanced/idx2term.json +1 -0
- interpro_family/advanced/plot_0.png +3 -0
- interpro_family/advanced/plot_1.png +3 -0
interpro_active_site/advanced/idx2term.json
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interpro_active_site/basic/idx2term.json
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{}
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interpro_active_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:ca62ad06695b353327e6ac46a348b88d7e07c5bd9ac369942f208dd5d51f97da
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size 73548
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interpro_active_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_active_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2943,
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"annotations_size": 55,
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"title": "Average number of proteins per term",
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"value": 2.327272727272727
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}
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interpro_active_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C240/C240_val_log2fc"}
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interpro_active_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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Serine carboxypeptidase, serine active site [IPR018202] 0.9414965986394572 2.0053118883361782 0.044929714676007 0.9202109435094772 0.1235567153590193 3 Q9H3G5,P10619 2
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Histidine acid phosphatase active site [IPR033379] 0.9156749404964328 1.7381201607635637 0.0821896431893343 0.991058456899552 0.1883512656422244 2 Q9NPH0 1
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ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003] 0.8586131283872194 1.51589495351218 0.1295459165749766 0.9995146861528376 0.2740394389086044 4 P21281 1
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Ubiquitin-conjugating enzyme, active site [IPR023313] 0.4472490534207723 0.3960258136791184 0.6920859852127281 1.0 0.7930151913895843 6 P68036,Q16763 2
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Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999] 0.4588435374149616 0.225951783369296 0.8212389217964713 1.0 0.8968392966996931 3 P00390,P09622 2
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interpro_active_site/selections.json
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{"all_annotations": ["ATP synthase, F0 complex, subunit A, active site [IPR023011]", "ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "DNA topoisomerase, type IA, active site [IPR023406]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glutaredoxin active site [IPR011767]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-CoA lyase, active site [IPR000138]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Lipase, GDXG, putative serine active site [IPR033140]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]"], "available_proteins": ["ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "AMPD2", "APEH", "ATP5A1", "ATP5B", "ATP6", "ATP6V1A", "ATP6V1B2", "BLMH", "CAMK2G", "CAPN1", "CDK1", "CDK12", "CDK4", "CDK5", "CDK6", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "EPHA7", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLRX", "GLUD1", "GSR", "HADHB", "HMGCL", "HMGCS1", "LDHA", "LDHB", "LONP1", "LYN", "MAP2K2", "MAPK1", "MAPK3", "MARK2", "MASTL", "MDH1", "MDH2", "MTMR2", "MTMR6", "NCEH1", "NEK9", "NME1", "NME2", "PAK1", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKN1", "PKN2", "PLK1", "PREP", "PRKAA1", "PRKACA", "PRPF4B", "PTK7", "PTPN1", "PTPN11", "RIPK1", "RNASET2", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SUCLG1", "TALDO1", "TIGAR", "TOP1", "TOP3A", "TPI1", "TPP2", "TTK", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2G2", "UBE2K", "UBE2L3", "UBE2M", "UBE2S", "UBE2T", "UMPS", "VRK1", "YES1"], "leading_proteins": ["ACP6", "ATP6V1B2", "CPVL", "CTSA", "DLD", "GSR", "UBE2L3", "UBE2S"]}
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interpro_binding_site/advanced/idx2term.json
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{"0": "EF-Hand 1, calcium-binding site [IPR018247]"}
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interpro_binding_site/advanced/plot_0.png
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interpro_binding_site/basic/idx2term.json
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{"0": "EF-Hand 1, calcium-binding site [IPR018247]", "1": "Beta tubulin, autoregulation binding site [IPR013838]"}
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interpro_binding_site/basic/plot_0.png
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interpro_binding_site/basic/plot_1.png
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interpro_binding_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:d2bf8660feb735d3c5f91faaf82f745beabe132abe934aae4675d6a538114fb7
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size 69007
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interpro_binding_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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EF-Hand 1, calcium-binding site [IPR018247] 11 37 2.253009048203579 0.0242585784662248 10.019417475728156 36.70631067961165 0.9532938980945532 0.3894555773109194 3.76037227687173 3.057484685571999 1.1082350706804749 0.3408841825650379 0.0116734382143932 0.0571768496395965 0.0413282647695778 0.0028924350901622 0.0003936097898921
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interpro_binding_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2943,
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"annotations_size": 32,
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"title": "Average number of proteins per term",
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"value": 4.0625
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}
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interpro_binding_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C240/C240_val_log2fc"}
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interpro_binding_site/result.tsv
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Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
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EF-Hand 1, calcium-binding site [IPR018247] 0.5317388393320654 2.253009048203579 0.0242585784662248 0.5442656786920399 0.0970343138648992 37 P41208,Q02818,O43852,P0DP25,P80303,Q9BRK5,Q9NWM8,O95302,Q9Y680,Q6NUK1,O95202 11
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Beta tubulin, autoregulation binding site [IPR013838] 0.4555669050050963 0.4269199842881015 0.6694376091659717 0.9999999999999996 0.738689775631417 6 P04350,P07437,Q9BUF5,Q9BVA1,Q13885 5
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Peptidase M16, zinc-binding site [IPR001431] 0.4074200136146838 0.190599995297052 0.8488389938765737 1.0 0.905428260135012 5 O75439,P22695,Q10713,P14735 4
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interpro_binding_site/selections.json
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{"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Legume lectin, beta chain, Mn/Ca-binding site [IPR019825]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]", "Ureohydrolase, manganese-binding site [IPR020855]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "APEX1", "APOBEC3C", "ARG2", "BPNT1", "CALM3", "CALU", "CAMK2G", "CAPN1", "CDK1", "CDK12", "CDK4", "CDK5", "CDK6", "CETN2", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DBT", "DCTD", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "EPHA7", "EPS15", "FKBP10", "FKBP14", "FKBP7", "FKBP9", "GCAT", "GOT1", "GOT2", "GPD2", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "IQGAP2", "LETM1", "LRP2", "LYN", "MACF1", "MAP2K2", "MAPK1", "MAPK14", "MAPK3", "MARK2", "MCCC1", "MICU1", "MYH10", "MYH9", "MYO18A", "MYO1B", "MYO1C", "MYO1D", "NFS1", "NRDC", "NUCB1", "NUCB2", "PA2G4", "PAK1", "PAK2", "PC", "PCCA", "PDCD6", "PEF1", "PGD", "PKN1", "PKN2", "PLCG1", "PLK1", "PLS1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1G", "PRKAA1", "PRKACA", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "STK4", "TKT", "TTK", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "UQCRC2", "VRK1", "YES1"], "leading_proteins": ["CALM3", "CALU", "CETN2", "FKBP14", "FKBP7", "FKBP9", "IDE", "LETM1", "NUCB1", "NUCB2", "PMPCA", "PMPCB", "SDF4", "SLC25A24", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB6", "UQCRC2"]}
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interpro_conserved_site/advanced/idx2term.json
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{}
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interpro_conserved_site/basic/idx2term.json
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{"0": "Tubulin, conserved site [IPR017975]", "1": "14-3-3 protein, conserved site [IPR023409]"}
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interpro_conserved_site/basic/plot_0.png
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interpro_conserved_site/basic/plot_1.png
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interpro_conserved_site/consensus.joblib
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version https://git-lfs.github.com/spec/v1
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oid sha256:1a276e757e0027416564049b87cb6c22ae2d20221932a789a8697cce94111c33
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size 99324
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interpro_conserved_site/df_merge.tsv
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
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interpro_conserved_site/metrics.json
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{
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"type_of_task": "ranksum",
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"signature_size": 2943,
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"annotations_size": 271,
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"title": "Average number of proteins per term",
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"value": 2.623616236162362
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}
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interpro_conserved_site/paths.json
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{"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C240/C240_val_log2fc"}
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interpro_conserved_site/result.tsv
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| 2 |
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Haem oxygenase conserved site [IPR018207] 0.9921795307718468 2.056646032229353 0.039720286903637 0.9999830257206648 0.1296891295287426 2 P30519 1
|
| 3 |
+
Syntaxin/epimorphin, conserved site [IPR006012] 0.8009692312575383 1.919255520626626 0.0549520041542055 0.99999977715775 0.1618694904977141 6 O60499,Q9P2W9,Q13190 3
|
| 4 |
+
Tetraspanin, conserved site [IPR018503] 0.940156409384566 1.8406407160874303 0.0656742268994228 0.9999999898831076 0.174487406762192 2 O43657 1
|
| 5 |
+
Zinc finger, RING-type, conserved site [IPR017907] 0.6755808858107327 1.8035200173279748 0.0713065846253 0.9999999980347796 0.1814859750438356 10 Q9UBS8 1
|
| 6 |
+
Proteasome beta-type subunit, conserved site [IPR016050] 0.6936501858692368 1.6860355286005058 0.0917889564107987 0.9999999999953376 0.2182000630467233 8 P28072,P49721 2
|
| 7 |
+
Sterol reductase, conserved site [IPR018083] 0.8085685141108527 1.286800769088097 0.1981637388193622 1.0 0.3533050869739945 2 Q14739 1
|
| 8 |
+
Actin/actin-like conserved site [IPR020902] 0.7040816326530663 1.059635409415442 0.2893104979517034 1.0 0.4810008892325866 3 P61163,P61158 2
|
| 9 |
+
Guanylate kinase, conserved site [IPR020590] 0.5957365601988177 1.0153566493733392 0.3099358496295274 1.0 0.5030350723341179 6 O14936,Q9NZW5,Q92796,Q00013 4
|
| 10 |
+
Glycoside hydrolase, family 29, conserved site [IPR018526] 0.7432845970758295 1.0150475290023648 0.3100831717901497 1.0 0.5030350723341179 2 P04066 1
|
| 11 |
+
Thioredoxin, conserved site [IPR017937] 0.4575669310343054 0.891985780594738 0.3724005540273714 1.0 0.5544996088124925 13 Q9H1E5,O43396,Q9H3N1,Q14554 4
|
| 12 |
+
Short-chain dehydrogenase/reductase, conserved site [IPR020904] 0.4829100347312546 0.8679193461894917 0.3854384872696732 1.0 0.5566963842054409 11 Q9Y394,Q06136 2
|
| 13 |
+
Acyl-CoA-binding protein, ACBP, conserved site [IPR022408] 0.6725603536212272 0.7334906697401845 0.463259216435989 1.0 0.6277162382707651 2 Q9H3P7 1
|
| 14 |
+
HMG box A DNA-binding domain, conserved site [IPR017967] 0.6180272108843484 0.7260517118774987 0.4678070698336891 1.0 0.6307249548503968 3 P26583,P09429 2
|
| 15 |
+
DNA ligase, ATP-dependent, conserved site [IPR016059] 0.6314178850731099 0.5814042299681116 0.5609680472658627 1.0 0.7070806549258083 2 P49916 1
|
| 16 |
+
Tubulin, conserved site [IPR017975] 0.4555669050050963 0.4269199842881015 0.6694376091659717 1.0 0.8063036974185328 6 P04350,P07437,Q9BUF5,Q9BVA1,Q13885 5
|
| 17 |
+
ABC transporter-like, conserved site [IPR017871] 0.4188116020666106 0.4269162362612991 0.6694403391851287 1.0 0.8063036974185328 9 Q03518,O75027 2
|
| 18 |
+
3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180] 0.523807537009024 0.401785775745327 0.6878416913623155 1.0 0.8175662208736294 3 Q16836 1
|
| 19 |
+
14-3-3 protein, conserved site [IPR023409] 0.4187946884576051 0.2962263503646745 0.7670572267191984 1.0 0.8770991917337669 6 P27348,P31946,P63104,P62258,Q04917 5
|
| 20 |
+
Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326] 0.5086705202312278 0.2224611316153297 0.8239549276507123 1.0 0.9265219310927096 2 P29692 1
|
| 21 |
+
Clathrin adaptor, mu subunit, conserved site [IPR018240] 0.4289115646258523 0.1628776064563722 0.8706148028197731 1.0 0.962622058871576 3 Q9Y2T2,Q9BXS5 2
|
| 22 |
+
Inositol monophosphatase, conserved site [IPR020550] 0.4777286637198317 0.1623729758363383 0.8710121505771917 1.0 0.962622058871576 2 Q9NX62 1
|
| 23 |
+
Clathrin adaptor complex, small chain [IPR000804] 0.4756885413124882 0.1588913164226196 0.8737545022725874 1.0 0.962622058871576 2 P53680 1
|
| 24 |
+
Cyclic nucleotide-binding, conserved site [IPR018488] 0.448146888813332 0.1176138127034708 0.9063736599585024 1.0 0.9632441641127614 2 P10644 1
|
| 25 |
+
DnaJ domain, conserved site [IPR018253] 0.3262683760893635 0.0871615948618836 0.9305430659953596 1.0 0.9748437792239204 10 Q9NVH1,Q9Y2G8,Q96KC8 3
|
| 26 |
+
Thiosulphate sulfurtransferase, conserved site [IPR001307] 0.3301598095885709 0.039074243372978 0.9688311960928212 1.0 0.991004316732752 2 P25325 1
|
| 27 |
+
Dynamin, GTPase region, conserved site [IPR019762] 0.3261904761904832 0.0379472400635887 0.9697297480277732 1.0 0.991004316732752 3 O00429,P50570 2
|
| 28 |
+
Ras GTPase-activating protein, conserved site [IPR023152] 0.2947976878612656 0.0341969430032062 0.972720104246908 1.0 0.991004316732752 2 Q13576 1
|
| 29 |
+
Adenylate kinase, conserved site [IPR033690] 0.3654304185096941 0.0293179088426246 0.976611043850466 1.0 0.9912419209118962 4 P30085,P54819,P27144 3
|
interpro_conserved_site/selections.json
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{"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Aldose 1-epimerase, conserved site [IPR018052]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAMSAP, spectrin and Ca2+/calmodulin-binding region [IPR031372]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "CBX family C-terminal motif [IPR033773]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA methylase, N-6 adenine-specific, conserved site [IPR002052]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family A, conserved site [IPR019760]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Fork head domain conserved site 2 [IPR030456]", "Fork head domain conserved site1 [IPR018122]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site [IPR017958]", "Glutathione peroxidase conserved site [IPR029760]", "Glycerate/sugar phosphate transporter, conserved site [IPR021159]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Golgin subfamily A member 2, C-terminal binding motif [IPR043937]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Helix-turn-helix motif [IPR000047]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "Homeobox, conserved site [IPR017970]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Integrin alpha chain, C-terminal cytoplasmic region, conserved site [IPR018184]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Low-density lipoprotein (LDL) receptor class A, conserved site [IPR023415]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Methylthiotransferase, conserved site [IPR020612]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "MoaA/NifB/PqqE, iron-sulphur binding, conserved site [IPR000385]", "Molybdenum cofactor biosynthesis, conserved site [IPR008284]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NADH:ubiquinone oxidoreductase, subunit 1, conserved site [IPR018086]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Pyridoxamine 5'-phosphate oxidase, conserved site [IPR019740]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "RNA polymerase, subunit H/Rpb5, conserved site [IPR020608]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal RNA adenine methylase transferase, conserved site [IPR020596]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "Tyrosine-protein kinase, receptor class V, conserved site [IPR001426]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "AAMP", "ABCB1", "ABCB10", "ABCB7", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ACAA2", "ACAD9", "ACADM", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACIN1", "ACLY", "ACSL1", "ACSL3", "ACSL4", "ACTL6A", "ACTN1", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK4", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH4A1", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA4", "ANXA6", "ANXA7", "AP1M1", "AP2M1", "AP2S1", "AP3M1", "APEX1", "APLP2", "APP", "ATAD1", "ATAD2", "ATP5C1", "ATP5O", "BAG6", "BAZ1A", "BAZ1B", "BAZ2A", "BCS1L", "BDH2", "BOP1", "BPNT1", "BPTF", "BRD2", "BRD4", "BUD31", "CAD", "CALR", "CAMSAP3", "CANX", "CAP1", "CAPZA1", "CAPZB", "CASK", "CBR1", "CBX1", "CBX3", "CBX5", "CBX8", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDH2", "CDKAL1", "CDX2", "CETN2", "CHAF1B", "CHD1", "CHD1L", "CHD4", "CLGN", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "CORO1B", "CORO1C", "CPOX", "CRYZ", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4B", "CUL5", "CYP51A1", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX6", "DHCR7", "DHFR", "DHRS7", "DHX15", "DHX16", "DHX29", "DHX30", "DHX33", "DHX36", "DHX38", "DHX40", "DHX8", "DHX9", "DIDO1", "DIS3", "DLG3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJB11", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC16", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNM3", "DNMT1", "DRG1", "DRG2", "DSC2", "DSC3", "DSG2", "DST", "DTYMK", "DYNLL1", "EARS2", "ECH1", "ECHDC1", "ECHS1", "ECI1", "ECI2", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EHHADH", "EIF3I", "EIF4A1", "EIF4A2", "EIF4A3", "EIF4E", "ENO1", "EPB41", "EPB41L2", "EPHA7", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FCGRT", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FOXC1", "FUCA1", "FUCA2", "GAA", "GALK1", "GALM", "GANAB", "GART", "GATB", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPA", "GMPPB", "GNPDA1", "GNS", "GOLGA2", "GPHN", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF3C2", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HGS", "HIBADH", "HINT2", "HLA-A", "HLA-B", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA14", "HSPA1B", "HSPA2", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "ILVBL", "IMPAD1", "IMPDH2", "INA", "INTS12", "IQGAP1", "IQGAP2", "ITGAV", "IVD", "KDM2A", "KDM5A", "KDSR", "KIF11", "KIF13B", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LAMP2", "LARS", "LARS2", "LBR", "LDLR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LRP1", "LRP2", "LRWD1", "LSS", "MACF1", "MAPK1", "MAPK14", "MAPK3", "MARS", "MAT2A", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME1", "ME2", "MGST2", "MIF", "MOCS1", "MPI", "MPP1", "MPP2", "MPP6", "MPP7", "MPST", "MRC2", "MRPL24", "MRPL3", "MRPS11", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "MVK", "ND1", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFV1", "NEFL", "NEFM", "NES", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NSD2", "NSF", "NUBP2", "NUDT1", "NUDT12", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL11", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA5", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PGM3", "PHF3", "PHGDH", "PHIP", "PIK3C2A", "PIK3C3", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLOD3", "PLRG1", "PLS1", "PLS3", "PNP", "PNPO", "POLA1", "POLD1", "POLG", "POLR1B", "POLR1C", "POLR2B", "POLR2C", "POLR2E", "PPIB", "PPIC", "PPID", "PPIE", "PPIF", "PPIH", "PPIL1", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS2", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RCL1", "RDH13", "RDX", "RIDA", "RNF14", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS28", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RRP9", "RSF1", "RSL24D1", "RTCA", "S100A11", "SART1", "SBDS", "SCAF11", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC27A4", "SLC2A1", "SLC37A4", "SLIT2", "SMARCA4", "SMS", "SMU1", "SNRNP40", "SNU13", "SORD", "SPATA5", "SPATA5L1", "SPTBN1", "SRM", "STAM", "STMN1", "STOM", "STX10", "STX12", "STX18", "STX3", "STX5", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SV2A", "SYNE1", "SYNE2", "TAP1", "TBL3", "TCP1", "TFB1M", "THOC6", "TK1", "TLN1", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM21", "TRIM24", "TRIM25", "TRIM28", "TRIM33", "TRIP13", "TRMT11", "TSFM", "TSPAN3", "TSPAN6", "TST", "TTF2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXN2", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UBA5", "UHRF1", "USP10", "USP11", "USP14", "USP19", "USP47", "USP48", "USP5", "USP7", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VAT1", "VCL", "VCP", "VIM", "VPS4A", "VPS4B", "WARS", "WARS2", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR41", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2", "ZMYND8"], "leading_proteins": ["ABCB7", "ACBD3", "ACTR1A", "ACTR3", "AK2", "AK4", "AP1M1", "AP2S1", "AP3M1", "CASK", "CMPK1", "DHRS7", "DLG3", "DNAJC1", "DNAJC11", "DNAJC16", "DNM1L", "DNM2", "EEF1D", "FUCA1", "HADH", "HMGB1", "HMGB2", "HMOX2", "IMPAD1", "IQGAP2", "KDSR", "LBR", "LIG3", "MPP1", "MPP6", "MPST", "PDIA5", "PRKAR1A", "PSMB2", "PSMB6", "RNF14", "STX10", "STX18", "STX5", "TAP1", "TMX1", "TMX4", "TSPAN6", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB6", "TXNL1", "YWHAB", "YWHAE", "YWHAH", "YWHAQ", "YWHAZ"]}
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interpro_domain/advanced/idx2term.json
ADDED
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| 1 |
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{"0": "EF-hand domain [IPR002048]"}
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interpro_domain/advanced/plot_0.png
ADDED
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Git LFS Details
|
interpro_domain/basic/idx2term.json
ADDED
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{"0": "EF-hand domain [IPR002048]", "1": "Thioredoxin domain [IPR013766]", "2": "Dynamin, N-terminal [IPR045063]", "3": "Dynamin-type guanine nucleotide-binding (G) domain [IPR030381]", "4": "Tubulin/FtsZ, GTPase domain [IPR003008]", "5": "Tubulin/FtsZ, 2-layer sandwich domain [IPR018316]", "6": "Ubiquitin-associated domain [IPR015940]", "7": "14-3-3 domain [IPR023410]", "8": "Phosphoribosyltransferase domain [IPR000836]"}
|
interpro_domain/basic/plot_0.png
ADDED
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Git LFS Details
|
interpro_domain/basic/plot_1.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_2.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_3.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_4.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_5.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_6.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_7.png
ADDED
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Git LFS Details
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interpro_domain/basic/plot_8.png
ADDED
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Git LFS Details
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interpro_domain/consensus.joblib
ADDED
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version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:66779408051ed5f929b291a7b76daa5e0dda13cce00989b6c846131012b93c82
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| 3 |
+
size 425532
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interpro_domain/df_merge.tsv
ADDED
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term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
|
| 2 |
+
Glutathione S-transferase, C-terminal-like [IPR010987] 4 12 2.457424549581949 0.0139937202337956 3.949029126213592 11.37621359223301 -0.0908035435769439 0.5323098181486043 2.6346872162188446 1.2313530457632356 0.9588413776865506 0.2992576122582335 0.0001327727267659 0.0027067874988798 1.391730242568295e-05 2.7582058036655703e-05 0.0007388687073799
|
| 3 |
+
EF-hand domain [IPR002048] 13 43 2.431840988700669 0.0150223006888989 12.385922330097088 43.512135922330096 1.0171858714399242 0.3947118087831401 4.608360476919044 4.087317384177653 1.201458704248258 0.3652478399429377 0.0292898971178211 0.086158736226278 0.0732279741082547 0.0104482115740687 0.0003176274883727
|
| 4 |
+
Glutathione S-transferase, N-terminal [IPR004045] 4 8 2.3737382386990427 0.0176090290783146 2.4635922330097086 7.354368932038835 0.1379245375050955 0.5007649291980636 1.692684060559357 0.9479949918991396 0.9964823876403148 0.2990443112345751 2.575935005420449e-05 0.0012601973854463 2.6194869200470976e-06 3.221304592468962e-06 9.569573614901708e-05
|
| 5 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 4 6 2.263219216600329 0.023622179202831 2.813106796116505 6.104368932038835 1.6405397264547834 0.1100883340733615 1.2852875686886795 0.8042848477475721 1.100790504333474 0.1612592696854457 0.0009918498188417 0.0573151884822011 0.0057815105752346 0.0001405335592956 0.0001575214550341
|
| 6 |
+
FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 4 12 2.2613778190665883 0.0237358710881254 3.1262135922330097 10.111650485436892 0.9686720267359892 0.3700536707457866 1.7316562118191232 1.203619216216406 0.9607394322697528 0.3108814801432357 0.0012731085823663 0.0619434524836269 0.0002366501305723 0.0001991597833083 0.0002457979454447
|
| 7 |
+
Phospholipid/glycerol acyltransferase [IPR002123] 3 5 2.0371804349654226 0.0416319637338105 2.4611650485436893 6.109223300970874 0.4541526786138767 0.3733328307275969 1.647577392422315 1.6678607828333205 1.200305691546449 0.3080828121567173 1.0 1.0 1.0 1.0 0.0062633876942655
|
| 8 |
+
Glutathione S-transferase, C-terminal [IPR004046] 3 10 2.0157530089200115 0.0438258095417531 4.296116504854369 9.6747572815534 -0.2960680455131327 0.4436917435255134 2.7947045045907837 0.7413211044633136 1.0797286822508236 0.3119102433166901 0.0012731085823663 0.0017760204843955 0.0002366501305723 0.0001991597833083 0.0027630263410089
|
interpro_domain/metrics.json
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+
{
|
| 2 |
+
"type_of_task": "ranksum",
|
| 3 |
+
"signature_size": 2943,
|
| 4 |
+
"annotations_size": 2490,
|
| 5 |
+
"title": "Average number of proteins per term",
|
| 6 |
+
"value": 2.1244979919678717
|
| 7 |
+
}
|
interpro_domain/paths.json
ADDED
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{"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C240/C240_val_log2fc"}
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interpro_domain/result.tsv
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+
Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
|
| 2 |
+
Glutathione S-transferase, C-terminal-like [IPR010987] 0.7558500400713104 2.457424549581949 0.0139937202337956 0.9999999999999994 0.0626697183132214 12 P28161,P78417,Q9H7Z7,O15217 4
|
| 3 |
+
EF-hand domain [IPR002048] 0.5341290685825979 2.431840988700669 0.0150223006888989 1.0 0.0653942809709064 43 P41208,Q02818,O43852,P0DP25,P80303,Q9BRK5,Q9NWM8,Q9UJS0,O95302,Q9Y680,Q6NUK1,Q8NF37,O95202 13
|
| 4 |
+
Glutathione S-transferase, N-terminal [IPR004045] 0.844129396646471 2.3737382386990427 0.0176090290783146 1.0 0.0706062518599089 8 P28161,P78417,Q9H7Z7,O15217 4
|
| 5 |
+
Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.8828177240134435 2.263219216600329 0.023622179202831 1.0 0.084027466021499 6 O00264,Q8WUJ1,O43169,O15173 4
|
| 6 |
+
FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 0.7180451429876387 2.2613778190665883 0.0237358710881254 1.0 0.0841913376202741 12 Q9NWM8,O95302,Q9Y680,P62942 4
|
| 7 |
+
Phospholipid/glycerol acyltransferase [IPR002123] 0.8769929756298007 2.0371804349654226 0.0416319637338105 1.0 0.1229698572920381 5 Q9NUQ2,O15228,Q8NF37 3
|
| 8 |
+
Glutathione S-transferase, C-terminal [IPR004046] 0.7178510673807291 2.0157530089200115 0.0438258095417531 1.0 0.1271549079817336 10 P28161,P78417,O15217 3
|
| 9 |
+
TRAM/LAG1/CLN8 homology domain [IPR006634] 0.9336734693877564 1.9748409197291728 0.048286203722764 1.0 0.1348237153103101 3 Q96G23,Q15629 2
|
| 10 |
+
GOLD domain [IPR009038] 0.8097472700398083 1.9567292853778393 0.0503793048821124 1.0 0.1376997466042369 6 Q9H3P7,Q15363,Q9Y3B3,Q9BVK6 4
|
| 11 |
+
Peptidase M1, membrane alanine aminopeptidase [IPR014782] 0.8091700994411319 1.9542695057456376 0.050669353182096 1.0 0.1381891450420802 6 P09960,Q9NZ08 2
|
| 12 |
+
Aminopeptidase N-like , N-terminal domain [IPR045357] 0.8091700994411319 1.9542695057456376 0.050669353182096 1.0 0.1381891450420802 6 P09960,Q9NZ08 2
|
| 13 |
+
FAD linked oxidase, N-terminal [IPR006094] 0.9666780006800416 1.951109450934145 0.0510440272029546 1.0 0.1386037379883937 2 Q15392 1
|
| 14 |
+
FAD-binding domain, PCMH-type [IPR016166] 0.9666780006800416 1.951109450934145 0.0510440272029546 1.0 0.1386037379883937 2 Q15392 1
|
| 15 |
+
MENTAL domain [IPR019498] 0.9625977558653532 1.934159061741881 0.0530935740556004 1.0 0.1427678179248867 2 O95772 1
|
| 16 |
+
Reticulon [IPR003388] 0.912158106394468 1.890652617449485 0.0586707314128056 1.0 0.1503242485708923 3 O95197 1
|
| 17 |
+
GMP phosphodiesterase, delta subunit [IPR008015] 0.9452567154029268 1.8619363094794896 0.0626120682730615 1.0 0.1553710357300349 2 A6NIH7 1
|
| 18 |
+
Glutaredoxin, PICOT-like [IPR033658] 0.9343760625637576 1.8164781242819024 0.0692970606511309 1.0 0.1670374453255721 2 O76003 1
|
| 19 |
+
P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.812330417121702 1.7717746611110707 0.0764319703545088 1.0 0.1783398196402351 5 P16615,Q9HD20,Q9NQ11 3
|
| 20 |
+
Endoplasmic reticulum vesicle transporter, C-terminal [IPR012936] 0.9190751445086752 1.7523867005486573 0.079707336736452 1.0 0.1834728655872837 2 Q9Y282 1
|
| 21 |
+
Endoplasmic reticulum vesicle transporter, N-terminal [IPR039542] 0.9190751445086752 1.7523867005486573 0.079707336736452 1.0 0.1834728655872837 2 Q9Y282 1
|
| 22 |
+
Polyketide synthase, enoylreductase domain [IPR020843] 0.7607876998965193 1.746038822050293 0.0808042061403604 1.0 0.1852693124212684 6 Q8N4Q0 1
|
| 23 |
+
Glutaredoxin [IPR002109] 0.9148225760968852 1.733720313704633 0.082967720426915 1.0 0.1884941823567686 4 P35754,O76003 2
|
| 24 |
+
IPT domain [IPR002909] 0.9020741244474682 1.6809769108943513 0.0927673994291082 1.0 0.2040554987442399 2 Q96KP1 1
|
| 25 |
+
Zinc finger, RING-type [IPR001841] 0.5272739267368185 1.6398097592995098 0.1010447283823259 1.0 0.2135835090594155 20 Q9UBS8,O95628 2
|
| 26 |
+
Target SNARE coiled-coil homology domain [IPR000727] 0.6396919512448533 1.6198352259418451 0.1052676771026248 1.0 0.2184304299879465 10 O60499,Q13190,Q13277,Q5SQN1 4
|
| 27 |
+
Proteasome activator PA28, N-terminal domain [IPR003185] 0.8401360544217729 1.605206485246458 0.1084483707317436 1.0 0.2233552052291494 3 P61289,Q9UL46 2
|
| 28 |
+
Proteasome activator PA28, C-terminal domain [IPR003186] 0.8401360544217729 1.605206485246458 0.1084483707317436 1.0 0.2233552052291494 3 P61289,Q9UL46 2
|
| 29 |
+
Phospholipase D/Transphosphatidylase [IPR001736] 0.8772526351581127 1.5764344271293722 0.1149257195433495 1.0 0.230778259405597 2 Q8N2A8 1
|
| 30 |
+
ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain [IPR000194] 0.8586131283872194 1.51589495351218 0.1295459165749766 1.0 0.2512222213953985 4 P21281 1
|
| 31 |
+
ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain [IPR004100] 0.8586131283872194 1.51589495351218 0.1295459165749766 1.0 0.2512222213953985 4 P21281 1
|
| 32 |
+
LEM domain [IPR003887] 0.7066703739058621 1.5088540193435027 0.1313360924487745 1.0 0.2543079148899175 6 P50402,P42166,Q86XL3 3
|
| 33 |
+
Choline/carnitine acyltransferase domain [IPR039551] 0.8585515130907893 1.4975336035186717 0.1342544686363567 1.0 0.2583412881796972 2 P23786 1
|
| 34 |
+
RNA recognition motif domain, eukaryote [IPR003954] 0.5337195687333365 1.3839556962317747 0.1663720209339394 1.0 0.2970223706457053 14 Q9UHX1 1
|
| 35 |
+
EB1, C-terminal [IPR004953] 0.8310098605916345 1.3813146983573636 0.1671822208080295 1.0 0.2977709083061471 2 Q15691 1
|
| 36 |
+
ABC transporter type 1, transmembrane domain [IPR011527] 0.711684666901918 1.3482821829916427 0.1775676404330894 1.0 0.308552075576839 5 Q03518,O75027 2
|
| 37 |
+
LEM-like domain [IPR013146] 0.821829309758592 1.3426170652578626 0.1793960016618132 1.0 0.3104211564544232 2 P42166 1
|
| 38 |
+
ERAP1-like C-terminal domain [IPR024571] 0.7950148526896113 1.2676107555064406 0.2049369890925243 1.0 0.3363830605407947 4 Q9NZ08,Q9UIQ6 2
|
| 39 |
+
Peptidase M28 [IPR007484] 0.7442737558032149 1.2203292621593764 0.2223400811853522 1.0 0.3558012867297731 3 Q969V3 1
|
| 40 |
+
Band 7 domain [IPR001107] 0.5935598856472797 1.2050205517869226 0.2281953680998842 1.0 0.363535807145689 8 Q99623,O75955,P27105 3
|
| 41 |
+
Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.7397959183673561 1.2023598593872244 0.2292241341904788 1.0 0.3647080473701548 3 P16615,P05023 2
|
| 42 |
+
Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.7397959183673561 1.2023598593872244 0.2292241341904788 1.0 0.3647080473701548 3 P16615,P05023 2
|
| 43 |
+
Thioredoxin domain [IPR013766] 0.4362230858801775 1.1828567452414522 0.2368659268081734 1.0 0.374711663120935 26 Q9BS26,Q9H1E5,Q9Y2G8,Q9H3N1,O76003 5
|
| 44 |
+
4Fe-4S ferredoxin-type, iron-sulphur binding domain [IPR017896] 0.7144440146518661 1.1009083551701828 0.270936545305624 1.0 0.4103937773448315 3 P21912 1
|
| 45 |
+
MD-2-related lipid-recognition domain [IPR003172] 0.7592655559333659 1.0808966245367433 0.2797431003072574 1.0 0.4188576787522977 2 P17900 1
|
| 46 |
+
CTP synthase GATase domain [IPR033828] 0.7558653519211231 1.066838885808315 0.2860445957319726 1.0 0.4264589947961131 2 Q9NRF8 1
|
| 47 |
+
CTP synthase, N-terminal [IPR017456] 0.7558653519211231 1.066838885808315 0.2860445957319726 1.0 0.4264589947961131 2 Q9NRF8 1
|
| 48 |
+
Syntaxin, N-terminal domain [IPR006011] 0.7013605442176792 1.0488216555161056 0.2942602086192987 1.0 0.4340686726670934 3 O15400,Q13277 2
|
| 49 |
+
Alpha-L-fucosidase, C-terminal [IPR031919] 0.7432845970758295 1.0150475290023648 0.3100831717901497 1.0 0.4531144939891273 2 P04066 1
|
| 50 |
+
BAG domain [IPR003103] 0.6900675699517127 1.0040675776245724 0.315346041893235 1.0 0.4573160421165726 3 Q9UL15 1
|
| 51 |
+
Legume-like lectin [IPR005052] 0.7358041482488986 0.9844375927676065 0.3249004019280814 1.0 0.4687149483203492 2 P49257 1
|
| 52 |
+
Tim44-like domain [IPR007379] 0.7320639238354343 0.9691899963680038 0.3324504013459797 1.0 0.4757479881330398 2 O43615 1
|
| 53 |
+
SCP2 sterol-binding domain [IPR003033] 0.6802721088435391 0.9654343202568624 0.334327318330704 1.0 0.4773365955524387 3 P22307,P51659 2
|
| 54 |
+
Alcohol dehydrogenase-like, C-terminal [IPR013149] 0.5578665604890398 0.9354586067380264 0.3495520059009658 1.0 0.4914649885338254 7 Q8N4Q0 1
|
| 55 |
+
Zinc finger, CHHC-type [IPR012996] 0.6710884353741454 0.9293975500187174 0.3526830970315042 1.0 0.4932857145739831 3 P55795,P52597 2
|
| 56 |
+
PITH domain [IPR010400] 0.7215232913974912 0.9264449328007616 0.3542148022724023 1.0 0.4932857145739831 2 O43396 1
|
| 57 |
+
CRIB domain [IPR000095] 0.7164229853791232 0.905891005721707 0.3649935454148534 1.0 0.5035091014310166 2 Q13177 1
|
| 58 |
+
p21 activated kinase binding domain [IPR033923] 0.7164229853791232 0.905891005721707 0.3649935454148534 1.0 0.5035091014310166 2 Q13177 1
|
| 59 |
+
Damage-control phosphatase ARMT1-like, metal-binding domain [IPR002791] 0.7150629037742264 0.9004251545872031 0.3678940392526058 1.0 0.5070809666509368 2 Q9H993 1
|
| 60 |
+
Glutamine amidotransferase type 2 domain [IPR017932] 0.6605442176870658 0.8882743212812045 0.3743932090258584 1.0 0.5133475167810503 3 Q06203,P08243 2
|
| 61 |
+
L27 domain [IPR004172] 0.6026939747176272 0.8872494635643485 0.3749446071620124 1.0 0.5136510181744505 5 O14936,Q9NZW5 2
|
| 62 |
+
SUN coiled coil domain 2 [IPR040994] 0.7058823529411771 0.8637082464061155 0.3877481824106403 1.0 0.5209331062152217 2 O94901 1
|
| 63 |
+
CBS domain [IPR000644] 0.5911916425025482 0.8395619882313325 0.4011540194749687 1.0 0.5335862759042053 5 P51790,P51798 2
|
| 64 |
+
Glutamine amidotransferase [IPR017926] 0.6764081651863276 0.8114032043497713 0.4171341595792344 1.0 0.5478143195008683 4 Q9NRF8,P49915 2
|
| 65 |
+
EF hand associated, type-2 [IPR013567] 0.6786807208432525 0.7570030011219454 0.4490480644674943 1.0 0.5707788993553643 2 Q8IXI2 1
|
| 66 |
+
MIRO domain [IPR020860] 0.6786807208432525 0.7570030011219454 0.4490480644674943 1.0 0.5707788993553643 2 Q8IXI2 1
|
| 67 |
+
EF hand associated, type-1 [IPR013566] 0.6786807208432525 0.7570030011219454 0.4490480644674943 1.0 0.5707788993553643 2 Q8IXI2 1
|
| 68 |
+
Acyl-CoA-binding protein, ACBP [IPR000582] 0.6725603536212272 0.7334906697401845 0.463259216435989 1.0 0.5828779428628664 2 Q9H3P7 1
|
| 69 |
+
EH domain-containing protein, N-terminal [IPR031692] 0.6671200272016344 0.7127638390654663 0.475991905431874 1.0 0.5905430216867794 2 Q9H223 1
|
| 70 |
+
Domain of unknown function DUF5600 [IPR040990] 0.6671200272016344 0.7127638390654663 0.475991905431874 1.0 0.5905430216867794 2 Q9H223 1
|
| 71 |
+
VHS domain [IPR002014] 0.5975093271369857 0.6504936766546857 0.5153733849549833 1.0 0.6247861843510232 3 O14964 1
|
| 72 |
+
L27 domain, C-terminal [IPR014775] 0.6305625266002037 0.6443508835739139 0.5193479267413952 1.0 0.6266290383752255 4 O14936 1
|
| 73 |
+
Dynamin, N-terminal [IPR045063] 0.4848796125171544 0.6070496353830817 0.5438179726244634 1.0 0.6448127389690066 7 Q8IWA4,Q9H4M9,Q9H223,O00429,O60313 5
|
| 74 |
+
Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.4848796125171544 0.6070496353830817 0.5438179726244634 1.0 0.6448127389690066 7 Q8IWA4,Q9H4M9,Q9H223,O00429,O60313 5
|
| 75 |
+
Peptidase M3A/M3B catalytic domain [IPR001567] 0.5792454086598757 0.5851882950259824 0.5584211144122389 1.0 0.6577429398706125 3 Q99797 1
|
| 76 |
+
DNA ligase, ATP-dependent, central [IPR012310] 0.6314178850731099 0.5814042299681116 0.5609680472658627 1.0 0.6598065364629183 2 P49916 1
|
| 77 |
+
DNA ligase, ATP-dependent, N-terminal [IPR012308] 0.6314178850731099 0.5814042299681116 0.5609680472658627 1.0 0.6598065364629183 2 P49916 1
|
| 78 |
+
DNA ligase, ATP-dependent, C-terminal [IPR012309] 0.6314178850731099 0.5814042299681116 0.5609680472658627 1.0 0.6598065364629183 2 P49916 1
|
| 79 |
+
Tudor domain [IPR002999] 0.4579630596139267 0.5596223556961674 0.5757370529301546 1.0 0.6702933141877775 8 Q92667,Q9Y2W6,Q16637,Q14739 4
|
| 80 |
+
Arginyl-tRNA synthetase, catalytic core domain [IPR035684] 0.6188371302278192 0.5373508009783808 0.591025320750791 1.0 0.6851271176301068 2 P54136 1
|
| 81 |
+
DALR anticodon binding [IPR008909] 0.6188371302278192 0.5373508009783808 0.591025320750791 1.0 0.6851271176301068 2 P54136 1
|
| 82 |
+
Tyrosine-specific protein phosphatase, PTPase domain [IPR000242] 0.6137368242094581 0.5198705899688082 0.6031537749824594 1.0 0.6965922540381836 2 P18031 1
|
| 83 |
+
Ribosomal protein S10 domain [IPR027486] 0.6082964977898747 0.5014796881805299 0.616033569350843 1.0 0.7085097402695607 2 P82664 1
|
| 84 |
+
Acyl-CoA oxidase/dehydrogenase, central domain [IPR006091] 0.4364011090813989 0.4645947921011928 0.6422216624730706 1.0 0.7315333666779258 8 P11310,Q15067 2
|
| 85 |
+
Tubulin/FtsZ, GTPase domain [IPR003008] 0.4555669050050963 0.4269199842881015 0.6694376091659717 1.0 0.7530774162795801 6 P04350,P07437,Q9BUF5,Q9BVA1,Q13885 5
|
| 86 |
+
Tubulin/FtsZ, 2-layer sandwich domain [IPR018316] 0.4555669050050963 0.4269199842881015 0.6694376091659717 1.0 0.7530774162795801 6 P04350,P07437,Q9BUF5,Q9BVA1,Q13885 5
|
| 87 |
+
ABC transporter-like, ATP-binding domain [IPR003439] 0.4188116020666106 0.4269162362612991 0.6694403391851287 1.0 0.7530774162795801 9 Q03518,O75027 2
|
| 88 |
+
3-hydroxyacyl-CoA dehydrogenase, NAD binding [IPR006176] 0.523807537009024 0.401785775745327 0.6878416913623155 1.0 0.7704569552371415 3 Q16836 1
|
| 89 |
+
3-hydroxyacyl-CoA dehydrogenase, C-terminal [IPR006108] 0.523807537009024 0.401785775745327 0.6878416913623155 1.0 0.7704569552371415 3 Q16836 1
|
| 90 |
+
Ubiquitin-associated domain [IPR015940] 0.3720754336699942 0.3941036630864188 0.6935045066719219 1.0 0.7750566524295716 13 Q04323,Q9UHD9,Q13501,Q14157,Q9NZ09 5
|
| 91 |
+
Rpn11/EIF3F, C-terminal [IPR024969] 0.5510167018130234 0.3826527669335611 0.7019772401612765 1.0 0.7831197706100261 4 O00303 1
|
| 92 |
+
B-box, C-terminal [IPR003649] 0.5142506425122446 0.3729352198492728 0.7091966582508664 1.0 0.7897583537766804 3 O15164 1
|
| 93 |
+
Longin domain [IPR010908] 0.5115646258503371 0.364995560553895 0.7151147201488142 1.0 0.7956370210770989 3 P51809,O75396 2
|
| 94 |
+
v-SNARE, coiled-coil homology domain [IPR042855] 0.5115646258503371 0.364995560553895 0.7151147201488142 1.0 0.7956370210770989 3 P51809,O75396 2
|
| 95 |
+
Far upstream element-binding protein, C-terminal [IPR015096] 0.5627337640258517 0.359104021236746 0.7195172734696942 1.0 0.7998205405980083 2 Q92945 1
|
| 96 |
+
Peptidase M16, N-terminal [IPR011765] 0.4134509475092491 0.3187511290834863 0.7499152399066105 1.0 0.8269658757163242 7 P22695,Q10713 2
|
| 97 |
+
Peptidase M16, C-terminal [IPR007863] 0.4134509475092491 0.3187511290834863 0.7499152399066105 1.0 0.8269658757163242 7 P22695,Q10713 2
|
| 98 |
+
Cyclin, C-terminal domain [IPR004367] 0.5416524991499535 0.3012634092171083 0.7632136407243304 1.0 0.8365686091032036 2 P14635 1
|
| 99 |
+
Cyclin, N-terminal [IPR006671] 0.5416524991499535 0.3012634092171083 0.7632136407243304 1.0 0.8365686091032036 2 P14635 1
|
| 100 |
+
Cyclin-like [IPR013763] 0.5416524991499535 0.3012634092171083 0.7632136407243304 1.0 0.8365686091032036 2 P14635 1
|
| 101 |
+
BAR domain [IPR004148] 0.488775510204077 0.3008143969203576 0.763556029445589 1.0 0.8365686091032036 3 Q9Y371,Q99961 2
|
| 102 |
+
14-3-3 domain [IPR023410] 0.4187946884576051 0.2962263503646745 0.7670572267191984 1.0 0.8395483492443094 6 P27348,P31946,P63104,P62258,Q04917 5
|
| 103 |
+
MIT domain [IPR007330] 0.4799319727891147 0.2775309849589308 0.7813724172977916 1.0 0.8533409294173251 3 Q8N0X7,Q9UN37 2
|
| 104 |
+
Chromo shadow domain [IPR008251] 0.4768707482993185 0.269693859757924 0.787395784774855 1.0 0.8579037653904165 3 Q13185,P45973 2
|
| 105 |
+
Chromo domain subgroup [IPR017984] 0.4768707482993185 0.269693859757924 0.787395784774855 1.0 0.8579037653904165 3 Q13185,P45973 2
|
| 106 |
+
Extended synaptotagmin, C2A domain [IPR037733] 0.5273716422985443 0.2653281526901409 0.7907566787504066 1.0 0.8590681195848657 2 Q9BSJ8 1
|
| 107 |
+
Synaptotagmin, SMP domain [IPR039010] 0.5273716422985443 0.2653281526901409 0.7907566787504066 1.0 0.8590681195848657 2 Q9BSJ8 1
|
| 108 |
+
Synaptotagmin-like mitochondrial-lipid-binding domain [IPR031468] 0.5273716422985443 0.2653281526901409 0.7907566787504066 1.0 0.8590681195848657 2 Q9BSJ8 1
|
| 109 |
+
Extended synaptotagmin, C2B domain [IPR037749] 0.5273716422985443 0.2653281526901409 0.7907566787504066 1.0 0.8590681195848657 2 Q9BSJ8 1
|
| 110 |
+
Extended synaptotagmin, C-terminal C2 domain [IPR037752] 0.5273716422985443 0.2653281526901409 0.7907566787504066 1.0 0.8590681195848657 2 Q9BSJ8 1
|
| 111 |
+
Phosphoribosyltransferase domain [IPR000836] 0.4051753489955694 0.2521235384382089 0.8009455764848432 1.0 0.8674878144616179 6 P07741,P11908,P00492,O60256,Q06203 5
|
| 112 |
+
AP complex, mu/sigma subunit [IPR022775] 0.4292035398230132 0.2494811218621987 0.8029886419081593 1.0 0.8689446842030929 5 P53680,P48444,Q9Y2T2,P61923 4
|
| 113 |
+
Domain of unknown function DUF1899 [IPR015048] 0.5158109486569296 0.2382560820597705 0.811682482017845 1.0 0.8749304676296251 2 Q9ULV4 1
|
| 114 |
+
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [IPR004099] 0.4588435374149616 0.225951783369296 0.8212389217964713 1.0 0.8821764086597125 3 P00390,P09622 2
|
| 115 |
+
Elongation factor 1 beta central acidic region, eukaryote [IPR018940] 0.5086705202312278 0.2224611316153297 0.8239549276507123 1.0 0.8839499223827116 2 P29692 1
|
| 116 |
+
Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain [IPR014038] 0.5086705202312278 0.2224611316153297 0.8239549276507123 1.0 0.8839499223827116 2 P29692 1
|
| 117 |
+
Rab-GTPase-TBC domain [IPR000195] 0.3893818838457766 0.2043504387896325 0.8380796570091871 1.0 0.895954116470713 6 Q9NVG8,Q9Y3P9,Q8TC07 3
|
| 118 |
+
STAT transcription factor, protein interaction [IPR013799] 0.4909894593675735 0.1864520508598406 0.8520902773082784 1.0 0.9082640370280878 2 P42224 1
|
| 119 |
+
STAT transcription factor, DNA-binding [IPR013801] 0.4909894593675735 0.1864520508598406 0.8520902773082784 1.0 0.9082640370280878 2 P42224 1
|
| 120 |
+
STAT transcription factor, all-alpha domain [IPR013800] 0.4909894593675735 0.1864520508598406 0.8520902773082784 1.0 0.9082640370280878 2 P42224 1
|
| 121 |
+
Thioredoxin-like fold [IPR012336] 0.4896293777626784 0.1838667014709834 0.8541180277869682 1.0 0.9092577551045536 2 Q6DKJ4 1
|
| 122 |
+
EH domain [IPR000261] 0.4722457999832884 0.1807031243494976 0.8566006062857716 1.0 0.9107324977162986 4 Q9H223,Q96D71 2
|
| 123 |
+
Ribose-phosphate pyrophosphokinase, N-terminal domain [IPR029099] 0.4340136054421649 0.1727598451936505 0.8628402012678196 1.0 0.9161927936703071 3 Q14558,O60256 2
|
| 124 |
+
Vacuolar protein sorting-associated protein 4, MIT domain [IPR045253] 0.4797687861271695 0.1659139422342279 0.868224675251247 1.0 0.9207323004155048 2 Q9UN37 1
|
| 125 |
+
TIP49, P-loop domain [IPR010339] 0.4685481128867722 0.1471709487666986 0.8829970904076079 1.0 0.9328225520216138 2 Q9Y230 1
|
| 126 |
+
RuvB-like, AAA-lid domain [IPR041048] 0.4685481128867722 0.1471709487666986 0.8829970904076079 1.0 0.9328225520216138 2 Q9Y230 1
|
| 127 |
+
Heat shock chaperonin-binding [IPR006636] 0.4520012611131292 0.1408212774213279 0.8880111336142378 1.0 0.9377216805341188 4 P54727,Q9UHD9 2
|
| 128 |
+
Beta-adaptin appendage, C-terminal subdomain [IPR015151] 0.4139455782312915 0.1359833003617342 0.8918344827073503 1.0 0.9387103809329284 3 O00203,Q10567 2
|
| 129 |
+
cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain [IPR003117] 0.448146888813332 0.1176138127034708 0.9063736599585024 1.0 0.9506615051797266 2 P10644 1
|
| 130 |
+
JAB1/MPN/MOV34 metalloenzyme domain [IPR000555] 0.3403521358124579 0.1111359977199649 0.9115085034900154 1.0 0.9535194458925592 8 Q92905,O00303 2
|
| 131 |
+
FAD dependent oxidoreductase [IPR006076] 0.4300782579108495 0.1036570747269757 0.9174414924848762 1.0 0.9571324362814484 4 Q9H9P8,P43304,Q96CU9 3
|
| 132 |
+
CELF1/2, RNA recognition motif 1 [IPR034196] 0.43556613396804 0.1021976492464846 0.9185997936170374 1.0 0.9571324362814484 2 Q92879 1
|
| 133 |
+
CELF1/2, RNA recognition motif 2 [IPR034198] 0.43556613396804 0.1021976492464846 0.9185997936170374 1.0 0.9571324362814484 2 Q92879 1
|
| 134 |
+
CELF1/2, RNA recognition motif 3 [IPR034199] 0.43556613396804 0.1021976492464846 0.9185997936170374 1.0 0.9571324362814484 2 Q92879 1
|
| 135 |
+
Mu homology domain [IPR028565] 0.4290575025518884 0.1020797393965677 0.9186933826155268 1.0 0.9571324362814484 4 P48444,Q9BXS5,Q9Y2T2 3
|
| 136 |
+
Replication factor C, C-terminal [IPR013748] 0.3914965986394568 0.1014839648524251 0.9191662860318714 1.0 0.9572246140607946 3 P35249,P40937 2
|
| 137 |
+
Pre-PUA domain [IPR041366] 0.432845970758246 0.099135468252568 0.9210307111891628 1.0 0.957964273542613 2 Q9ULC4 1
|
| 138 |
+
Methylglyoxal synthase-like domain [IPR011607] 0.4318259095545799 0.0980114455046318 0.9219232049300788 1.0 0.958492183831272 2 P31939 1
|
| 139 |
+
GRAM domain [IPR004182] 0.386054421768705 0.094159901588383 0.9249821371023526 1.0 0.9604693583756704 3 Q969T9,Q66K14 2
|
| 140 |
+
Nucleotidyl transferase domain [IPR005835] 0.3853741496598653 0.0932723781998921 0.9256871754051996 1.0 0.9608007781404532 3 Q9NR50,Q9Y5P6 2
|
| 141 |
+
BSD domain [IPR005607] 0.4229853791227454 0.0888142736931096 0.9292295137544822 1.0 0.962566679505841 2 Q96A49 1
|
| 142 |
+
Prolyl 4-hydroxylase alpha-subunit, N-terminal [IPR013547] 0.4223053383202992 0.0881465273922169 0.929760216758658 1.0 0.9626167656180002 2 P13674 1
|
| 143 |
+
MHC class I, alpha chain, C-terminal [IPR010579] 0.3782312925170082 0.084324300084584 0.9327985925315154 1.0 0.9641629287685652 3 P01889,P10321 2
|
| 144 |
+
MHC class I alpha chain, alpha1 alpha2 domains [IPR001039] 0.3782312925170082 0.084324300084584 0.9327985925315154 1.0 0.9641629287685652 3 P01889,P10321 2
|
| 145 |
+
MoaB/Mog domain [IPR001453] 0.4121047262835746 0.0787873652634207 0.9372017538648793 1.0 0.96743706549461 2 Q9NQX3 1
|
| 146 |
+
Peptidase M16, middle/third domain [IPR032632] 0.4070044202652183 0.0745551091561149 0.9405686923688604 1.0 0.9701806313166786 2 P14735 1
|
| 147 |
+
Dynamin, GTPase domain [IPR001401] 0.3979105996832103 0.0603650108724452 0.95186492509622 1.0 0.9770365077465382 4 O00429 1
|
| 148 |
+
Myotubularin-like phosphatase domain [IPR010569] 0.3859231553893232 0.0599704817173441 0.9521791445387986 1.0 0.9770365077465382 2 Q9Y217 1
|
| 149 |
+
Septin-type guanine nucleotide-binding (G) domain [IPR030379] 0.3974140864239498 0.0597982656117089 0.9523163069481316 1.0 0.9770365077465382 4 Q16181,Q15019,Q9NVA2 3
|
| 150 |
+
Protein kinase C-like, phorbol ester/diacylglycerol-binding domain [IPR002219] 0.3513605442176908 0.0564800126047249 0.9549594177356888 1.0 0.9793447076449197 3 Q9H0H5,Q92974 2
|
| 151 |
+
Ras GTPase-activating domain [IPR001936] 0.3449107512052637 0.0510817342478705 0.9592603909474168 1.0 0.9820923674658956 3 Q13576 1
|
| 152 |
+
Guanylate kinase-like domain [IPR008144] 0.3211978523902887 0.0498105158773011 0.9602733866286588 1.0 0.9820923674658956 7 O14936,Q9NZW5,Q92796,Q00013 4
|
| 153 |
+
Guanylate kinase/L-type calcium channel beta subunit [IPR008145] 0.3211978523902887 0.0498105158773011 0.9602733866286588 1.0 0.9820923674658956 7 O14936,Q9NZW5,Q92796,Q00013 4
|
| 154 |
+
Major facilitator superfamily domain [IPR020846] 0.3364332982195605 0.0496521801051417 0.960399564168456 1.0 0.9820923674658956 5 Q7L0J3 1
|
| 155 |
+
Protein-tyrosine phosphatase, catalytic [IPR003595] 0.386185777475333 0.0477691019051615 0.961900261540792 1.0 0.9828197173724136 4 Q06124,Q9Y217,P18031 3
|
| 156 |
+
Major sperm protein (MSP) domain [IPR000535] 0.3370748299319763 0.0451408765295858 0.9639950198547348 1.0 0.984152514884518 3 Q8NHP6,Q9P0L0 2
|
| 157 |
+
Diaphanous autoregulatory (DAD) domain [IPR014767] 0.3515810948656895 0.0446448210897764 0.9643904161920578 1.0 0.984152514884518 2 Q9NSV4 1
|
| 158 |
+
Formyl transferase, N-terminal [IPR002376] 0.3349200952057081 0.0401030066991988 0.9680110047323862 1.0 0.9863672682145244 2 Q96DP5 1
|
| 159 |
+
Peptidase M20, dimerisation domain [IPR011650] 0.3318599115946989 0.0394292703775257 0.9685481436622176 1.0 0.9863672682145244 2 Q8IYS1 1
|
| 160 |
+
Acyl-CoA dehydrogenase/oxidase, N-terminal [IPR013786] 0.3159933965999017 0.0393195199784948 0.968635643957072 1.0 0.9863672682145244 7 P11310 1
|
| 161 |
+
Acyl-CoA dehydrogenase/oxidase C-terminal [IPR009075] 0.3159933965999017 0.0393195199784948 0.968635643957072 1.0 0.9863672682145244 7 P11310 1
|
| 162 |
+
Dynamin GTPase effector [IPR003130] 0.3261904761904832 0.0379472400635887 0.9697297480277732 1.0 0.9863672682145244 3 O00429,P50570 2
|
| 163 |
+
GTPase effector domain [IPR020850] 0.3261904761904832 0.0379472400635887 0.9697297480277732 1.0 0.9863672682145244 3 O00429,P50570 2
|
| 164 |
+
Dynamin stalk domain [IPR000375] 0.3261904761904832 0.0379472400635887 0.9697297480277732 1.0 0.9863672682145244 3 O00429,P50570 2
|
| 165 |
+
JmjC domain [IPR003347] 0.3732028569923968 0.0356752260908042 0.9715413246895416 1.0 0.9878064101580069 4 Q8IUF8 1
|
| 166 |
+
RasGAP protein, C-terminal [IPR000593] 0.2947976878612656 0.0341969430032062 0.972720104246908 1.0 0.988501589924399 2 Q13576 1
|
| 167 |
+
UAS [IPR006577] 0.2900374022441279 0.03382207225174 0.9730190349014868 1.0 0.988501589924399 2 Q96CS3 1
|
| 168 |
+
Cold shock domain [IPR011129] 0.3683383762560291 0.0316216013127962 0.9747738166460804 1.0 0.9890736770369764 4 Q9Y2V2 1
|
| 169 |
+
Cold-shock protein, DNA-binding [IPR002059] 0.3683383762560291 0.0316216013127962 0.9747738166460804 1.0 0.9890736770369764 4 Q9Y2V2 1
|
| 170 |
+
Cold-shock (CSD) domain [IPR019844] 0.3683383762560291 0.0316216013127962 0.9747738166460804 1.0 0.9890736770369764 4 Q9Y2V2 1
|
| 171 |
+
Beta-Casp domain [IPR022712] 0.3010204081632719 0.025475611292054 0.9796756015421992 1.0 0.9920261276291484 3 Q9UKF6,Q5TA45 2
|
| 172 |
+
Zn-dependent metallo-hydrolase, RNA specificity domain [IPR011108] 0.3010204081632719 0.025475611292054 0.9796756015421992 1.0 0.9920261276291484 3 Q9UKF6,Q5TA45 2
|
interpro_domain/selections.json
ADDED
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interpro_family/advanced/idx2term.json
ADDED
|
@@ -0,0 +1 @@
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|
| 1 |
+
{"0": "Small GTPase superfamily, ARF/SAR type [IPR006689]", "1": "Mitochondrial carrier protein [IPR002067]"}
|
interpro_family/advanced/plot_0.png
ADDED
|
Git LFS Details
|
interpro_family/advanced/plot_1.png
ADDED
|
Git LFS Details
|