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  1. interpro_active_site/advanced/idx2term.json +1 -0
  2. interpro_active_site/basic/idx2term.json +1 -0
  3. interpro_active_site/consensus.joblib +3 -0
  4. interpro_active_site/df_merge.tsv +1 -0
  5. interpro_active_site/metrics.json +7 -0
  6. interpro_active_site/paths.json +1 -0
  7. interpro_active_site/result.tsv +6 -0
  8. interpro_active_site/selections.json +1 -0
  9. interpro_binding_site/advanced/idx2term.json +1 -0
  10. interpro_binding_site/basic/idx2term.json +1 -0
  11. interpro_binding_site/basic/plot_0.png +3 -0
  12. interpro_binding_site/consensus.joblib +3 -0
  13. interpro_binding_site/df_merge.tsv +1 -0
  14. interpro_binding_site/metrics.json +7 -0
  15. interpro_binding_site/paths.json +1 -0
  16. interpro_binding_site/result.tsv +7 -0
  17. interpro_binding_site/selections.json +1 -0
  18. interpro_conserved_site/advanced/idx2term.json +1 -0
  19. interpro_conserved_site/basic/idx2term.json +1 -0
  20. interpro_conserved_site/basic/plot_0.png +3 -0
  21. interpro_conserved_site/consensus.joblib +3 -0
  22. interpro_conserved_site/df_merge.tsv +1 -0
  23. interpro_conserved_site/metrics.json +7 -0
  24. interpro_conserved_site/paths.json +1 -0
  25. interpro_conserved_site/result.tsv +33 -0
  26. interpro_conserved_site/selections.json +1 -0
  27. interpro_domain/advanced/idx2term.json +1 -0
  28. interpro_domain/basic/idx2term.json +1 -0
  29. interpro_domain/basic/plot_0.png +3 -0
  30. interpro_domain/basic/plot_1.png +3 -0
  31. interpro_domain/basic/plot_2.png +3 -0
  32. interpro_domain/basic/plot_3.png +3 -0
  33. interpro_domain/basic/plot_4.png +3 -0
  34. interpro_domain/basic/plot_5.png +3 -0
  35. interpro_domain/consensus.joblib +3 -0
  36. interpro_domain/df_merge.tsv +1 -0
  37. interpro_domain/metrics.json +7 -0
  38. interpro_domain/paths.json +1 -0
  39. interpro_domain/result.tsv +197 -0
  40. interpro_domain/selections.json +0 -0
  41. interpro_family/advanced/idx2term.json +1 -0
  42. interpro_family/basic/idx2term.json +1 -0
  43. interpro_family/basic/plot_0.png +3 -0
  44. interpro_family/consensus.joblib +3 -0
  45. interpro_family/df_merge.tsv +1 -0
  46. interpro_family/metrics.json +7 -0
  47. interpro_family/paths.json +1 -0
  48. interpro_family/result.tsv +110 -0
  49. interpro_family/selections.json +0 -0
  50. interpro_homologous_superfamily/advanced/idx2term.json +1 -0
interpro_active_site/advanced/idx2term.json ADDED
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+ {}
interpro_active_site/basic/idx2term.json ADDED
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+ {}
interpro_active_site/consensus.joblib ADDED
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+ size 78020
interpro_active_site/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
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+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_active_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3021,
4
+ "annotations_size": 57,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.5789473684210527
7
+ }
interpro_active_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
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+ {"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C251/C251_val_log2fc"}
interpro_active_site/result.tsv ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
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+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003] 0.6632152725871646 0.6577956269087238 0.5106694648111709 1.0 0.6615490794144715 4 P06576,P21281 2
3
+ ATP:guanido phosphotransferase active site [IPR022415] 0.6472341835044804 0.6184343059369871 0.536289089740213 1.0 0.6792995136709366 2 P12532 1
4
+ Malate dehydrogenase, active site [IPR001252] 0.619410400794975 0.5213268505997414 0.6021390993295139 1.0 0.7302538013145169 2 P40925 1
5
+ Protein-tyrosine phosphatase, active site [IPR016130] 0.4331398318017068 0.4421266342299688 0.658397572006892 1.0 0.7626404253387735 7 Q8WUK0,O75319 2
6
+ Thiolase, acyl-enzyme intermediate active site [IPR020615] 0.396051292571304 0.1144792257279697 0.9088579135909276 1.0 0.9774509636732618 5 P55084,P24752,P22307 3
interpro_active_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
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+ {"all_annotations": ["ATP synthase, F0 complex, subunit A, active site [IPR023011]", "ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Coenzyme A transferase active site [IPR004164]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glutaredoxin active site [IPR011767]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-CoA lyase, active site [IPR000138]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Lipase, GDXG, putative serine active site [IPR033140]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Peptidase family C14A, His active site [IPR016129]", "Peptidase family C14A, cysteine active site [IPR033139]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]"], "available_proteins": ["ACAA1", "ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADSS", "APEH", "ATP5A1", "ATP5B", "ATP6", "ATP6V1A", "ATP6V1B2", "BLMH", "CAMK2G", "CAPN1", "CAPN2", "CASP7", "CDC34", "CDK1", "CDK12", "CDK13", "CDK2", "CDK4", "CDK5", "CDK6", "CDK9", "CHEK1", "CHEK2", "CHUK", "CKB", "CKMT1A*", "CLK2", "CLK3", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "CTSC", "DLD", "DNMT1", "DUSP11", "DUSP3", "EIF2AK2", "EPHA7", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLRX", "GLUD1", "GSR", "GUSB", "HADHB", "HMGCL", "HMGCS1", "IGF1R", "IKBKB", "LDHA", "LDHB", "LONP1", "LONP2", "LYN", "MAP2K1", "MAP2K4", "MAP4K4", "MAPK1", "MAPK3", "MARK2", "MDH1", "MDH2", "MTMR6", "NCEH1", "NEK9", "NME1", "NME2", "NME6", "OXCT1", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKMYT1", "PKN2", "PLK1", "PREP", "PRKAA2", "PRKACA", "PRKG1", "PRPF4B", "PTK7", "PTPMT1", "PTPN1", "PTPN11", "PTPRF", "RNASET2", "ROCK1", "RPS6KA1", "RPS6KA3", "RRM2", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRC", "SRPK1", "SUCLG1", "TALDO1", "TLK2", "TOP1", "TPI1", "TPP2", "TTK", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "UMPS", "VRK1", "WNK2"], "leading_proteins": ["ACAT1", "ATP5B", "ATP6V1B2", "CKMT1A*", "DUSP11", "HADHB", "MDH1", "PTPMT1", "SCP2"]}
interpro_binding_site/advanced/idx2term.json ADDED
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interpro_binding_site/basic/idx2term.json ADDED
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+ {"0": "EF-Hand 1, calcium-binding site [IPR018247]"}
interpro_binding_site/basic/plot_0.png ADDED

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interpro_binding_site/df_merge.tsv ADDED
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+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_binding_site/metrics.json ADDED
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+ {
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+ "type_of_task": "ranksum",
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+ "signature_size": 3021,
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+ "annotations_size": 30,
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+ "title": "Average number of proteins per term",
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interpro_binding_site/paths.json ADDED
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+ {"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C251/C251_val_log2fc"}
interpro_binding_site/result.tsv ADDED
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+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ EF-Hand 1, calcium-binding site [IPR018247] 0.4342650759069399 1.6925026867053616 0.090550168278976 0.9420087582937452 0.2091042432415495 34 Q9Y680,P31949,P80303,Q9NWM8,O75340 5
3
+ Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917] 0.6363034117257462 0.5796012571732293 0.5621835450541806 0.9999999999826714 0.6983899665233042 2 O75600 1
4
+ Peptidase M16, zinc-binding site [IPR001431] 0.5184318277339521 0.4247920967362243 0.6709882395338465 0.9999999999999968 0.725631359799746 5 O75439,P22695 2
5
+ Beta tubulin, autoregulation binding site [IPR013838] 0.4273674881232965 0.4201322919120197 0.674388813786887 0.9999999999999976 0.725631359799746 7 Q9BVA1 1
6
+ Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349] 0.5869493209672187 0.416210556355904 0.6772559358130963 0.999999999999998 0.725631359799746 2 P50579 1
7
+ 2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016] 0.564249671886898 0.3505998418618422 0.725888575191145 1.0 0.7509192157149776 4 P36957,O00330 2
interpro_binding_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
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+ {"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Coenzyme A transferase binding site [IPR004163]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "APEX1", "BPNT1", "CALU", "CAMK2G", "CAPN1", "CAPN2", "CAPNS1", "CDK1", "CDK12", "CDK13", "CDK2", "CDK4", "CDK5", "CDK6", "CDK9", "CETN2", "CHEK1", "CHUK", "CLK2", "CLK3", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DBT", "DLAT", "DLST", "EHD1", "EIF2AK2", "EPHA7", "FKBP10", "FKBP14", "FKBP7", "GCAT", "GOT1", "GOT2", "GPD2", "HK1", "HK2", "HMBS", "IDE", "IGF1R", "ILKAP", "IQGAP1", "IQGAP2", "LETM1", "LYN", "MACF1", "MAP2K1", "MAP2K4", "MAP4K4", "MAPK1", "MAPK3", "MARK2", "MCCC1", "METAP2", "MICU1", "MYH10", "MYH14", "MYH9", "MYO1B", "MYO1C", "MYO1D", "MYO1E", "MYO5A", "NFS1", "NRDC", "NUCB1", "NUCB2", "OXCT1", "OXSR1", "PA2G4", "PAK2", "PC", "PCCA", "PDCD6", "PDHX", "PEF1", "PGD", "PKMYT1", "PKN2", "PLCG1", "PLK1", "PLS1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1F", "PPM1G", "PRKAA2", "PRKACA", "PRKCSH", "PRKG1", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK1", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRC", "SRI", "SRPK1", "STK26", "STK4", "TKT", "TLK2", "TTK", "TUBB", "TUBB2A", "TUBB2B", "TUBB3", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "UQCRC2", "VRK1"], "leading_proteins": ["DLST", "FKBP14", "FKBP7", "GCAT", "METAP2", "NUCB2", "PDCD6", "PDHX", "PMPCB", "S100A11", "TUBB2B", "UQCRC2"]}
interpro_conserved_site/advanced/idx2term.json ADDED
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interpro_conserved_site/basic/idx2term.json ADDED
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+ {"0": "ATPase, AAA-type, conserved site [IPR003960]"}
interpro_conserved_site/basic/plot_0.png ADDED

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interpro_conserved_site/df_merge.tsv ADDED
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+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_conserved_site/metrics.json ADDED
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+ {
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interpro_conserved_site/paths.json ADDED
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+ {"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C251/C251_val_log2fc"}
interpro_conserved_site/result.tsv ADDED
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+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Haem oxygenase conserved site [IPR018207] 0.9672076846637973 1.9055282059943244 0.056711444561327 0.9999998574285252 0.1814531926150069 2 P30519 1
3
+ Thioredoxin, conserved site [IPR017937] 0.5839942585954744 1.7671575952671286 0.0772018390957196 0.999999999620847 0.2148917170705598 13 Q9H1E5,Q9H3N1 2
4
+ D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752] 0.9062603511096424 1.655966896324189 0.0977285228749518 0.9999999999991268 0.2430245716978025 2 O43175 1
5
+ Adenylate kinase, conserved site [IPR033690] 0.7870695232076061 1.4636766468757605 0.143282319210938 1.0 0.308017573605946 5 P27144,Q9UIJ7 2
6
+ Thiosulphate sulfurtransferase, conserved site [IPR001307] 0.8449817820470393 1.4029980641655484 0.1606174162084257 1.0 0.318872811590257 2 P25325 1
7
+ Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364] 0.9055666003976182 1.3241260523167098 0.1854611845663685 1.0 0.3429761632391746 3 Q08257,Q8N4Q0 2
8
+ Procollagen-lysine 5-dioxygenase, conserved site [IPR001006] 0.8600832216860108 1.1586765880988106 0.246588037337974 1.0 0.3933077374680148 3 O60568 1
9
+ Chromo domain, conserved site [IPR023779] 0.7105163528166445 1.1525505734713306 0.2490949003964093 1.0 0.3933077374680148 5 P83916,Q13185,P45973 3
10
+ Fumarate lyase, conserved site [IPR020557] 0.7731036767141491 1.107466514934948 0.2680922818754361 1.0 0.4160052649791249 2 P07954 1
11
+ Aldo/keto reductase, conserved site [IPR018170] 0.7661477310367729 1.0791700313050971 0.2805119366965094 1.0 0.4248054201201982 2 P14550 1
12
+ F-actin capping protein, alpha subunit, conserved site [IPR017865] 0.7509108976482325 1.0175041286662911 0.3089136692035088 1.0 0.4508469766753912 2 P52907 1
13
+ Guanylate kinase, conserved site [IPR020590] 0.5718928842033255 0.917977735277187 0.358630522317557 1.0 0.4940318419680631 6 O14936,Q5T2T1 2
14
+ D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753] 0.7164712229619127 0.8450186823421273 0.3981004082005954 1.0 0.5456198488028465 4 O43175 1
15
+ Ribosomal S11, conserved site [IPR018102] 0.6975819807883474 0.8065639199609523 0.4199177676809675 1.0 0.572615137746774 2 P82912 1
16
+ AMP-binding, conserved site [IPR020845] 0.4707787528537492 0.6979104447506795 0.485233202015324 1.0 0.623871259733988 8 O95573,Q6P1M0,Q96CM8,O60488 4
17
+ Macrophage migration inhibitory factor, conserved site [IPR019829] 0.6575024842663217 0.6556428818299854 0.5120539276972877 1.0 0.64304446734078 2 P30046 1
18
+ HMG box A DNA-binding domain, conserved site [IPR017967] 0.6901921802518374 0.573356775410381 0.5664031507651284 1.0 0.6951311395753849 3 P26583,P09429 2
19
+ Dynein light chain, type 1/2, conserved site [IPR019763] 0.6313348790990486 0.5622334612784858 0.5739569661432538 1.0 0.7012143930256947 2 P63167 1
20
+ 14-3-3 protein, conserved site [IPR023409] 0.5556649182530633 0.5515793028133877 0.5812366199536929 1.0 0.7052312359846755 5 P31946,P63104,Q04917 3
21
+ Tubulin, conserved site [IPR017975] 0.4273674881232965 0.4201322919120197 0.674388813786887 1.0 0.7882466654651926 7 Q9BVA1 1
22
+ Short-chain dehydrogenase/reductase, conserved site [IPR020904] 0.3116684910851965 0.2521200645468872 0.8009482615401602 1.0 0.9010667942326802 12 Q53GQ0,Q8NBN7 2
23
+ Thiolase, conserved site [IPR020613] 0.3871418808435592 0.2226347233604102 0.8238198092946583 1.0 0.911603887334253 6 P55084,P24752,P22307 3
24
+ Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628] 0.4922159655515198 0.176942974663483 0.8595531822640021 1.0 0.9438310486404758 2 P11586 1
25
+ Hexapeptide transferase, conserved site [IPR018357] 0.4471679364027988 0.1049515946005788 0.9164142184214426 1.0 0.9772162389275896 2 Q9Y5P6 1
26
+ Purine phosphorylase, family 2, conserved site [IPR018099] 0.4375621066578445 0.0931186236471062 0.9258093221885246 1.0 0.9791251168027753 2 P00491 1
27
+ ATPase, AAA-type, conserved site [IPR003960] 0.2472633103644565 0.0830992385842171 0.9337726312756254 1.0 0.9791251168027753 19 Q9ULI0,Q9Y276,P62191,P62333,P43686,Q9Y4W6,Q96TA2,Q8NBU5 8
28
+ Ribosomal protein L30, conserved site [IPR018038] 0.3792646571712575 0.0444093689577451 0.9645780936698116 1.0 0.9978394072446328 2 Q6DKI1 1
29
+ Malic enzyme, conserved site [IPR015884] 0.3448161642928243 0.0303577665423035 0.9757817267350744 1.0 0.9984757969162598 2 P23368 1
30
+ Ribosomal protein L3, conserved site [IPR019926] 0.3345478635309813 0.0276530133604529 0.9779388992632334 1.0 0.9984757969162598 2 P39023 1
31
+ Clathrin adaptor, mu subunit, conserved site [IPR018240] 0.3690683409448957 0.0215996375332731 0.9827673226716976 1.0 0.9984757969162598 3 Q96CW1 1
32
+ Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892] 0.2280482146696141 0.0162469301870094 0.9870373955199524 1.0 0.9984757969162598 12 Q13356,Q9H2H8,O43447 3
33
+ Phosphofructokinase, conserved site [IPR015912] 0.3442677269715005 0.0158154515868368 0.987381621394968 1.0 0.9984757969162598 3 P17858,P08237 2
interpro_conserved_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Aminotransferase, class IV, conserved site [IPR018300]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Anion exchange, conserved site [IPR018241]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Bromodomain, conserved site [IPR018359]", "CAMSAP, spectrin and Ca2+/calmodulin-binding region [IPR031372]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "CBX family C-terminal motif [IPR033773]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA methylase, N-6 adenine-specific, conserved site [IPR002052]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "Dihydroorotate dehydrogenase, conserved site [IPR001295]", "DnaJ domain, conserved site [IPR018253]", "Dpy-30 motif [IPR007858]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Endonuclease III-like, conserved site-2 [IPR004036]", "Endonuclease III-like, iron-sulphur cluster loop motif [IPR003651]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "Fibrillarin, conserved site [IPR020813]", "Fork head domain conserved site 2 [IPR030456]", "Fork head domain conserved site1 [IPR018122]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site [IPR017958]", "Glutathione peroxidase conserved site [IPR029760]", "Glycerate/sugar phosphate transporter, conserved site [IPR021159]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Golgin subfamily A member 2, C-terminal binding motif [IPR043937]", "Guanine-nucleotide dissociation stimulator, CDC24, conserved site [IPR001331]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif [IPR000445]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Lysophospholipase patatin, conserved site [IPR001423]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Methylthiotransferase, conserved site [IPR020612]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Molybdenum cofactor biosynthesis, conserved site [IPR008284]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NADH:ubiquinone oxidoreductase, subunit 1, conserved site [IPR018086]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase TruD, conserved site [IPR020119]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal RNA adenine methylase transferase, conserved site [IPR020596]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "Ribosome-binding factor A, conserved site [IPR020053]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Transcription factor TFIIB, conserved site [IPR023486]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Tubulin, conserved site [IPR017975]", "Tyrosine-protein kinase, receptor class II, conserved site [IPR002011]", "Tyrosine-protein kinase, receptor class V, conserved site [IPR001426]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "AAMP", "ABCB1", "ABCB10", "ABCB7", "ABCC4", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ACAA1", "ACAA2", "ACAD9", "ACADM", "ACADS", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACIN1", "ACLY", "ACSF2", "ACSF3", "ACSL1", "ACSL3", "ACSL4", "ACSL6", "ACTL6A", "ACTN1", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK3", "AK4", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH4A1", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ANXA1", "ANXA11", "ANXA2", "ANXA6", "ANXA7", "AP1M1", "AP1S2", "AP2M1", "AP3M1", "AP3S1", "APEX1", "APP", "ARIH2", "ATAD1", "ATAD2", "ATAD2B", "ATM", "ATP5C1", "ATP5O", "BAG6", "BAZ1A", "BAZ1B", "BAZ2A", "BCAT2", "BCS1L", "BOP1", "BPNT1", "BPTF", "BRD2", "BRD4", "BUD31", "CAD", "CALR", "CAMSAP3", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CASK", "CBL", "CBR1", "CBX1", "CBX3", "CBX5", "CBX8", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDH2", "CDK5RAP1", "CDKAL1", "CETN2", "CHAF1B", "CHD1", "CHD1L", "CHD4", "CLGN", "CMPK1", "CNDP2", "COPA", "COPZ1", "CORO1B", "CORO1C", "CPOX", "CRYZ", "CSTB", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4B", "CUL5", "CWC27", "CYP51A1", "DCAF7", "DCP2", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX31", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX55", "DDX6", "DHCR7", "DHFR", "DHODH", "DHRS4", "DHRS7", "DHRS7B", "DHX15", "DHX16", "DHX30", "DHX36", "DHX38", "DHX40", "DHX57", "DHX8", "DHX9", "DIDO1", "DIMT1", "DIS3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJB11", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNMT1", "DPY30", "DRG1", "DRG2", "DSC2", "DSG2", "DTYMK", "DYNLL1", "DYNLL2", "EARS2", "ECH1", "ECHDC1", "ECHS1", "ECI1", "ECI2", "ECT2", "EED", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EHHADH", "EIF3I", "EIF4A1", "EIF4A2", "EIF4A3", "EIF4E2", "ENO1", "EP300", "EPB41", "EPB41L2", "EPB41L3", "EPHA7", "EPRS", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FOXC1", "FUCA1", "FUCA2", "GAA", "GALK1", "GANAB", "GART", "GATB", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPA", "GMPPB", "GNPDA1", "GNS", "GOLGA2", "GPHN", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF2B", "GTF3C2", "GUF1", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HIBADH", "HINT2", "HLA-A", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA14", "HSPA1B", "HSPA2", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "IDH3G", "IGF1R", "ILVBL", "IMPDH2", "INA", "INTS12", "IQGAP1", "IQGAP2", "IVD", "KDM2A", "KDM5A", "KDSR", "KIF11", "KIF14", "KIF18B", "KIF1A", "KIF20A", "KIF20B", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LAMP2", "LARS", "LARS2", "LBR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LSS", "MACF1", "MAPK1", "MAPK3", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME1", "ME2", "MIF", "MPI", "MPP1", "MPP2", "MPP5", "MPP6", "MPP7", "MPST", "MRPL13", "MRPL24", "MRPL3", "MRPS11", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "MVK", "ND1", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFV1", "NEFL", "NES", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NSD1", "NSD2", "NSF", "NTHL1", "NUBP2", "NUBPL", "NUDT1", "NUDT5", "NUP153", "NUP43", "NVL", "OSBP", "OSBPL11", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PBRM1", "PCDH7", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA5", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PGM3", "PHF14", "PHF3", "PHF8", "PHGDH", "PHIP", "PHRF1", "PI4KA", "PIK3C2A", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLOD3", "PLRG1", "PLS1", "PLS3", "PNP", "PNPLA6", "POLA1", "POLD1", "POLR1B", "POLR1C", "POLR2B", "POLR2C", "PPIB", "PPIC", "PPID", "PPIE", "PPIF", "PPIH", "PPIL1", "PPIL2", "PPIL3", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRKG1", "PRPF19", "PRPF4", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PUS7", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RBFA", "RCL1", "RDH13", "RDX", "RIDA", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS21", "RPS24", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RSF1", "RTCA", "S100A10", "S100A11", "SART1", "SBDS", "SCAF11", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC27A3", "SLC27A4", "SLC37A4", "SLC4A2", "SLIT2", "SMARCA4", "SMU1", "SNRNP40", "SNU13", "SORD", "SPATA5", "SPATA5L1", "SPTBN1", "SPTBN2", "SRCAP", "SRM", "STAM", "STMN1", "STX12", "STX18", "STX3", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SYNE2", "TAP1", "TBL3", "TCP1", "TFB1M", "THOC6", "TK1", "TLN1", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TRIM21", "TRIM24", "TRIM25", "TRIM27", "TRIM28", "TRIM33", "TRIP13", "TRMT11", "TSFM", "TSPAN6", "TST", "TTF2", "TUBB", "TUBB2A", "TUBB2B", "TUBB3", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXN2", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UHRF1", "USP10", "USP11", "USP14", "USP15", "USP19", "USP47", "USP48", "USP5", "USP7", "USP8", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "VPS4B", "WARS", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR41", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2", "ZMYND8"], "leading_proteins": ["ACAT1", "ACSF2", "ACSL3", "ACSL4", "AFG3L2", "AK3", "AK4", "AKR1A1", "AP2M1", "ATAD1", "ATAD2B", "BCS1L", "CAPZA1", "CASK", "CBX1", "CBX3", "CBX5", "CRYZ", "DDT", "DYNLL1", "FH", "GMPPB", "HADHB", "HMGB1", "HMGB2", "HMOX2", "HSD17B12", "ME2", "MPP7", "MPST", "MRPS11", "MTHFD1", "PFKL", "PFKM", "PHGDH", "PLOD3", "PNP", "PPIH", "PPIL2", "PPIL3", "PSMC1", "PSMC4", "PSMC6", "RDH13", "RPL3", "RPL7L1", "SCP2", "SLC27A4", "TMX1", "TMX4", "TUBB2B", "YME1L1", "YWHAB", "YWHAH", "YWHAZ", "ZADH2"]}
interpro_domain/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_domain/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "EF-hand domain [IPR002048]", "1": "RNA recognition motif domain [IPR000504]", "2": "Chromo/chromo shadow domain [IPR000953]", "3": "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain [IPR002130]", "4": "AAA ATPase, AAA+ lid domain [IPR041569]", "5": "Glutathione S-transferase, C-terminal [IPR004046]"}
interpro_domain/basic/plot_0.png ADDED

Git LFS Details

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interpro_domain/basic/plot_1.png ADDED

Git LFS Details

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interpro_domain/basic/plot_2.png ADDED

Git LFS Details

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interpro_domain/basic/plot_3.png ADDED

Git LFS Details

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interpro_domain/basic/plot_4.png ADDED

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interpro_domain/basic/plot_5.png ADDED

Git LFS Details

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interpro_domain/consensus.joblib ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:d2a99b93978e6b42a7cac47078f5a1b1f7de5c31215dcecdc1f31b2344799679
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+ size 447150
interpro_domain/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_domain/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3021,
4
+ "annotations_size": 2546,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.1661429693637078
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+ }
interpro_domain/paths.json ADDED
@@ -0,0 +1 @@
 
 
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+ {"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C251/C251_val_log2fc"}
interpro_domain/result.tsv ADDED
@@ -0,0 +1,197 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Actin-depolymerising factor homology domain [IPR002108] 0.7332799197053276 1.941966129237077 0.0521412008066257 1.0 0.1367779272169471 8 Q9Y281,Q6IBS0 2
3
+ Ovarian carcinoma immunoreactive antigen domain [IPR009764] 0.965220271613118 1.897441196696257 0.0577697327898603 1.0 0.1437690192910399 2 Q56VL3 1
4
+ Ribosomal protein/NADH dehydrogenase domain [IPR007741] 0.953958264325937 1.8515427554307864 0.0640915097392913 1.0 0.1549638972423891 2 P82663 1
5
+ Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.7650437164986097 1.7653965497447377 0.0774971428586206 1.0 0.1779149916303409 6 O43169,O15173,O95864 3
6
+ Immunoglobulin V-set domain [IPR013106] 0.9306707508505476 1.6439585240893488 0.1001847699753684 1.0 0.2152493032550953 4 Q9BY67 1
7
+ Reticulon [IPR003388] 0.9893969516235932 1.6296893253584863 0.1031671745876599 1.0 0.2205404084804215 3 O95197,Q16799 2
8
+ NIPSNAP [IPR012577] 0.9476474486414872 1.477673297020509 0.1394952450619431 1.0 0.2753138712617884 3 Q9UFN0,O75323 2
9
+ CD80-like, immunoglobulin C2-set [IPR013162] 0.940243797444272 1.450663612044635 0.146873552631471 1.0 0.2845814802128807 3 Q9BY67 1
10
+ RBM3/CIRBP, RNA recognition motif [IPR034278] 0.8545876117919863 1.4426937599083325 0.1491067578463862 1.0 0.2867264391819482 2 P98179 1
11
+ L27 domain [IPR004172] 0.6896561422685162 1.436341256762228 0.1509052597691753 1.0 0.2888608880598687 6 O14936,Q5T2T1 2
12
+ Prolyl 4-hydroxylase, alpha subunit [IPR006620] 0.6242891526691183 1.4284013607051722 0.1531763677528332 1.0 0.2910678926675804 8 P13674,O60568,Q6PK18 3
13
+ Oxoglutarate/iron-dependent dioxygenase [IPR005123] 0.6242891526691183 1.4284013607051722 0.1531763677528332 1.0 0.2910678926675804 8 P13674,O60568,Q6PK18 3
14
+ TRAM/LAG1/CLN8 homology domain [IPR006634] 0.921382991015786 1.381833385284401 0.1670228656007242 1.0 0.3091347024171393 3 Q96G23 1
15
+ P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.6762458086415295 1.3772221668145144 0.1684435704728615 1.0 0.3108064913913558 6 P05023,P16615 2
16
+ Phospholipid/glycerol acyltransferase [IPR002123] 0.7639164371701652 1.36962297186558 0.1708046249151187 1.0 0.3135317772414508 5 Q92604,O15228,Q86UL3 3
17
+ Band 7 domain [IPR001107] 0.6392715118449288 1.3526232896913633 0.1761760082187708 1.0 0.3187365475285256 7 O94905,O75477,Q99623,Q14254 4
18
+ Glycosyl transferase, family 1 [IPR001296] 0.8513461316937146 1.3461259631099736 0.1782618968095137 1.0 0.321654705369966 4 Q9BT22 1
19
+ Immunoglobulin-like domain [IPR007110] 0.5354723611765801 1.3402963236188132 0.1801490262499432 1.0 0.3243701703199119 11 Q9BY67,P15151 2
20
+ CARG-binding factor, N-terminal [IPR012956] 0.8284200066247118 1.334597380236218 0.1820081559221762 1.0 0.3251879052476215 2 Q99729 1
21
+ Immunoglobulin subtype [IPR003599] 0.5550921133983158 1.3331789979603288 0.1824730697728256 1.0 0.3257415248158207 10 Q9BY67,P15151 2
22
+ Uncharacterised domain CHP00451 [IPR004521] 0.8204703544219959 1.3018009244055613 0.1929844477272906 1.0 0.3381544417850529 2 Q9ULC4 1
23
+ EF-hand domain [IPR002048] 0.3738194541643952 1.2714692496136424 0.2035617603197603 1.0 0.3508925130494989 40 Q9Y680,P31949,P80303,Q9NWM8,O75340 5
24
+ Exosome complex component, N-terminal domain [IPR025721] 0.8098708181517095 1.2581287459065091 0.2083451988274451 1.0 0.3537954337771332 2 Q9Y3B2 1
25
+ Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.8276741928770364 1.2570474518970152 0.2087364534365621 1.0 0.3537954337771332 4 P05023,P16615 2
26
+ Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.8276741928770364 1.2570474518970152 0.2087364534365621 1.0 0.3537954337771332 4 P05023,P16615 2
27
+ Aminotransferase, class I/classII [IPR004839] 0.615393203948166 1.242567123185774 0.2140273912848842 1.0 0.3584958804021811 7 P00505,Q8TD30 2
28
+ Adenylate kinase, active site lid domain [IPR007862] 0.8820410868124656 1.238413466497262 0.2155627898900061 1.0 0.3603564432435689 3 P27144,Q9UIJ7 2
29
+ L27 domain, C-terminal [IPR014775] 0.7303908832273012 1.2332648729600122 0.2174769588803546 1.0 0.3630795654487757 5 O14936,Q5T2T1 2
30
+ Endoplasmic reticulum vesicle transporter, N-terminal [IPR039542] 0.7999337528983179 1.2172632740923166 0.2235040628001323 1.0 0.3707109732176787 2 Q9Y282 1
31
+ Endoplasmic reticulum vesicle transporter, C-terminal [IPR012936] 0.7999337528983179 1.2172632740923166 0.2235040628001323 1.0 0.3707109732176787 2 Q9Y282 1
32
+ LEM domain [IPR003887] 0.7229312326765722 1.2029476970924862 0.228996561092412 1.0 0.37711852816383 5 Q86XL3,P50402,P42167 3
33
+ RNA recognition motif domain [IPR000504] 0.3221884239363743 1.1984008025065194 0.2307610202057979 1.0 0.3790435854477171 117 Q14103,P18615,Q9UKA9,Q9NW64,P08579,P98179,P55795,Q01844,A0AV96,P42696,Q9Y3B4,P38159,Q9BWF3,Q93062,P43243,Q9UKM9,Q8IZ69,O14979,Q07955,Q13148,Q12849,P35637,Q14011,Q9BY77,P22626,P31483,Q8IY67,Q13595,Q01085,Q8WUA2,Q8N684,Q96EP5,Q86U42,Q9GZT3,O95319,P09651,P33240,P62995,Q13151,P52272,P09012,Q13242,P23246,Q9BYG3,P26368,Q99729,Q13283,P51991,P31943,Q92804,O43251,Q15427,P23588,Q8WXF1 54
34
+ Pumilio homology domain [IPR033133] 0.7919841006955974 1.1846386185879758 0.2361603610710994 1.0 0.3841944276594371 2 Q14671 1
35
+ LEM-like domain [IPR013146] 0.790990394170261 1.1805653800742677 0.2377754234249502 1.0 0.3860817780866858 2 P42167 1
36
+ Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain [IPR044861] 0.8600832216860108 1.1586765880988106 0.246588037337974 1.0 0.3963466812263144 3 O60568 1
37
+ NADP-dependent oxidoreductase domain [IPR023210] 0.7984838092243223 1.1474844975282843 0.2511814365921632 1.0 0.4009454154004059 4 P48507,P14550 2
38
+ FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 0.5399087849888905 1.131100640083774 0.2580127349331373 1.0 0.4057445479553846 9 Q9NWM8,O00170,Q9Y680 3
39
+ Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal [IPR031717] 0.7780722093408449 1.1277264190535916 0.2594354766684215 1.0 0.4069764162648189 2 Q96HY7 1
40
+ Pyrroline-5-carboxylate reductase, dimerisation domain [IPR029036] 0.7744286187479335 1.112865410149382 0.2657662377133092 1.0 0.414100882018412 2 P32322 1
41
+ Pyrroline-5-carboxylate reductase, catalytic, N-terminal [IPR028939] 0.7744286187479335 1.112865410149382 0.2657662377133092 1.0 0.414100882018412 2 P32322 1
42
+ Fumarate lyase, N-terminal [IPR022761] 0.7731036767141491 1.107466514934948 0.2680922818754361 1.0 0.416001566153436 2 P07954 1
43
+ JAB1/MPN/MOV34 metalloenzyme domain [IPR000555] 0.5574516865541885 1.1068371463233728 0.2683643447445518 1.0 0.416111828087472 8 O00303,O00487 2
44
+ Peptidase M20, dimerisation domain [IPR011650] 0.7704537926465754 1.0966772474915711 0.2727825059440532 1.0 0.420656729335893 2 Q96KP4 1
45
+ Fzo/mitofusin HR2 domain [IPR006884] 0.7654852600198798 1.0764795120846604 0.2817128589072917 1.0 0.4275175407010058 2 Q8IWA4 1
46
+ Peptidase M41 [IPR000642] 0.7608479629016277 1.0576686148798922 0.2902065486395146 1.0 0.433861346351265 2 Q96TA2 1
47
+ Electron transfer flavoprotein, alpha/beta-subunit, N-terminal [IPR014730] 0.7568731368002695 1.0415781661571066 0.2976072957976323 1.0 0.4395059020306102 2 P13804 1
48
+ Legume-like lectin [IPR005052] 0.7558794302749308 1.0375605685471612 0.2994746836452324 1.0 0.4412398984726631 2 P49257 1
49
+ Metaxin, glutathione S-transferase domain [IPR033468] 0.7555481947664833 1.036221826530974 0.3000986663387963 1.0 0.4413929546496681 2 O75431 1
50
+ Mitochondrial outer membrane transport complex Sam37/metaxin, N-terminal domain [IPR019564] 0.7555481947664833 1.036221826530974 0.3000986663387963 1.0 0.4413929546496681 2 O75431 1
51
+ MPN domain [IPR037518] 0.5101744762382253 0.9817090808276516 0.3262431904360543 1.0 0.4669000353289456 9 O00303,O00487 2
52
+ PUA domain [IPR002478] 0.7515461981320117 0.9729608649288922 0.3305727527822686 1.0 0.4717703075020492 4 Q9Y221,Q9ULC4 2
53
+ NECAP, PHear domain [IPR012466] 0.7353428287512473 0.95503682140606 0.3395590765574008 1.0 0.4800591333283864 2 Q9NVZ3 1
54
+ Rhodanese-like domain [IPR001763] 0.656771857108604 0.9362247385587814 0.3491574885699664 1.0 0.4892898109301731 5 P25325,Q16762 2
55
+ CTLH/CRA C-terminal to LisH motif domain [IPR024964] 0.7300430606161035 0.9339170151838236 0.3503467010822461 1.0 0.4901003851403288 2 Q9NWU2 1
56
+ CRA domain [IPR013144] 0.7300430606161035 0.9339170151838236 0.3503467010822461 1.0 0.4901003851403288 2 Q9NWU2 1
57
+ Cold-shock protein, DNA-binding [IPR002059] 0.6519969618709821 0.9172388232564272 0.3590175069677992 1.0 0.4983961683424301 5 P16989 1
58
+ Cold shock domain [IPR011129] 0.6519969618709821 0.9172388232564272 0.3590175069677992 1.0 0.4983961683424301 5 P16989 1
59
+ Chromo shadow domain [IPR008251] 0.7889330682571285 0.904175092884882 0.3659025650541778 1.0 0.5051995285400959 3 P83916,Q13185 2
60
+ Chromo domain subgroup [IPR017984] 0.7889330682571285 0.904175092884882 0.3659025650541778 1.0 0.5051995285400959 3 P83916,Q13185 2
61
+ Immunoglobulin subtype 2 [IPR003598] 0.4914471637484061 0.8884590790725115 0.3742938582596515 1.0 0.5134440534100608 9 Q13308,P35613,Q9BY67 3
62
+ D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain [IPR006140] 0.7164712229619127 0.8450186823421273 0.3981004082005954 1.0 0.5345799785225296 4 O43175 1
63
+ D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [IPR006139] 0.7164712229619127 0.8450186823421273 0.3981004082005954 1.0 0.5345799785225296 4 O43175 1
64
+ SMARCC, SWIRM-associated domain [IPR032448] 0.7052003974826164 0.8361065252016655 0.4030949778206625 1.0 0.5376801949379818 2 Q8TAQ2 1
65
+ SMARCC, C-terminal [IPR032451] 0.7052003974826164 0.8361065252016655 0.4030949778206625 1.0 0.5376801949379818 2 Q8TAQ2 1
66
+ SMARCC, N-terminal [IPR032450] 0.7052003974826164 0.8361065252016655 0.4030949778206625 1.0 0.5376801949379818 2 Q8TAQ2 1
67
+ Dynamin, N-terminal [IPR045063] 0.54936710098099 0.820954178381563 0.4116723689369708 1.0 0.5413831876619462 6 Q9H4M9 1
68
+ Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.54936710098099 0.820954178381563 0.4116723689369708 1.0 0.5413831876619462 6 Q9H4M9 1
69
+ DNA/RNA non-specific endonuclease [IPR001604] 0.7008943358728122 0.8193796094692669 0.4125698648385913 1.0 0.5417240205668147 2 Q9Y2C4 1
70
+ Extracellular Endonuclease, subunit A [IPR020821] 0.7008943358728122 0.8193796094692669 0.4125698648385913 1.0 0.5417240205668147 2 Q9Y2C4 1
71
+ FAD dependent oxidoreductase [IPR006076] 0.7032953338436525 0.7977704482147471 0.4250037134401183 1.0 0.5540498998558839 4 Q8NCN5,Q9H9P8 2
72
+ Peptidase M16, N-terminal [IPR011765] 0.5167506615299795 0.7926129287264018 0.4280033738145761 1.0 0.5562514495823945 7 O75439,Q5JRX3,P22695 3
73
+ Peptidase M16, C-terminal [IPR007863] 0.5167506615299795 0.7926129287264018 0.4280033738145761 1.0 0.5562514495823945 7 O75439,Q5JRX3,P22695 3
74
+ Serine-tRNA ligase catalytic core domain [IPR033729] 0.6929446836700963 0.7886999353410421 0.4302874057278716 1.0 0.5570223729176585 2 P49591 1
75
+ Transketolase, C-terminal domain [IPR033248] 0.6886386220602918 0.772196864413651 0.4399978383866627 1.0 0.56321493038333 2 P29401 1
76
+ Transketolase-like, pyrimidine-binding domain [IPR005475] 0.6890951276102042 0.7474727706266232 0.4547782332693006 1.0 0.5689462202810046 4 Q02218,P29401,Q96HY7 3
77
+ Cold-shock (CSD) domain [IPR019844] 0.6874322977590381 0.741629658749002 0.4583117487717727 1.0 0.56920083530387 4 P16989 1
78
+ Zinc finger, CHHC-type [IPR012996] 0.7370653562766745 0.7257259701204911 0.4680067778240706 1.0 0.5734937242270893 3 P31943 1
79
+ Major facilitator superfamily domain [IPR020846] 0.7369888173178973 0.72546924707397 0.4681642046204115 1.0 0.5734937242270893 3 Q14728 1
80
+ Lysophosphatidylcholine acyltransferase LPCAT1-like [IPR045252] 0.669095727061949 0.6984273505929381 0.4849099767579394 1.0 0.5873518206801499 2 Q86UL3 1
81
+ AMP-dependent synthetase/ligase [IPR000873] 0.4707787528537492 0.6979104447506795 0.485233202015324 1.0 0.587448279757972 8 O95573,Q6P1M0,Q96CM8,O60488 4
82
+ Tim44-like domain [IPR007379] 0.6598211328254471 0.6641363953752638 0.5066030178307979 1.0 0.6064472611622892 2 Q9BRJ2 1
83
+ ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain [IPR004100] 0.6632152725871646 0.6577956269087238 0.5106694648111709 1.0 0.6092616951308534 4 P06576,P21281 2
84
+ ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain [IPR000194] 0.6632152725871646 0.6577956269087238 0.5106694648111709 1.0 0.6092616951308534 4 P06576,P21281 2
85
+ Dehydrogenase, E1 component [IPR001017] 0.7133863485752175 0.6474606358636555 0.517333863165617 1.0 0.6166348387732495 3 Q02218,Q96HY7 2
86
+ KOW [IPR005824] 0.5060916622986286 0.6401340281648783 0.5220854681255584 1.0 0.6220073008178155 6 P61353,P62701,Q96A35 3
87
+ ATP:guanido phosphotransferase, catalytic domain [IPR022414] 0.6472341835044804 0.6184343059369871 0.536289089740213 1.0 0.6350660569667825 2 P12532 1
88
+ ATP:guanido phosphotransferase, N-terminal [IPR022413] 0.6472341835044804 0.6184343059369871 0.536289089740213 1.0 0.6350660569667825 2 P12532 1
89
+ v-SNARE, coiled-coil homology domain [IPR042855] 0.7023413219488452 0.6118275826890549 0.5406518383855323 1.0 0.6384506403198354 3 O75396 1
90
+ Longin domain [IPR010908] 0.7023413219488452 0.6118275826890549 0.5406518383855323 1.0 0.6384506403198354 3 O75396 1
91
+ Thioredoxin domain [IPR013766] 0.3334155606849044 0.60470947127907 0.5453720538871889 1.0 0.6434278263191765 26 Q9H1E5,Q9H3N1 2
92
+ Rpn11/EIF3F, C-terminal [IPR024969] 0.6450055117602072 0.5965393581215602 0.5508149690061508 1.0 0.6477621760831147 4 O00487 1
93
+ Ulp1 protease family, C-terminal catalytic domain [IPR003653] 0.6406094733355505 0.5947991828635588 0.5519777138529316 1.0 0.6482173706040424 2 Q9H4L4 1
94
+ SCP2 sterol-binding domain [IPR003033] 0.6914005630404387 0.5771473072094475 0.563839949127211 1.0 0.6588051906736482 3 P22307 1
95
+ Thioesterase domain [IPR006683] 0.6323285856243881 0.5656922892074315 0.5716029778683169 1.0 0.6657370455867955 2 Q9NPJ3 1
96
+ Zinc finger, RanBP2-type [IPR001876] 0.4637467667860502 0.5643830974324051 0.5724934395408989 1.0 0.6664692716374617 7 Q01844,Q92804 2
97
+ 14-3-3 domain [IPR023410] 0.5556649182530633 0.5515793028133877 0.5812366199536929 1.0 0.6747963677164168 5 P31946,P63104,Q04917 3
98
+ Ribosomal protein S7 domain [IPR023798] 0.6270288174892443 0.5473323301127903 0.5841504363518357 1.0 0.6778701052651658 2 P46782 1
99
+ Nuclear transport factor 2, eukaryote [IPR018222] 0.6281073914484518 0.5413112748081038 0.5882930504605057 1.0 0.681633361446076 4 Q9UN86,P61970,Q13283 3
100
+ Nuclear transport factor 2 domain [IPR002075] 0.6281073914484518 0.5413112748081038 0.5882930504605057 1.0 0.681633361446076 4 Q9UN86,P61970,Q13283 3
101
+ Proteasome component (PCI) domain [IPR000717] 0.3623727857988396 0.5351815732179659 0.5925243069754658 1.0 0.6857122207088799 16 Q9BT78 1
102
+ Myb domain [IPR017930] 0.4148729311239656 0.5243560809287681 0.6000308975629236 1.0 0.6918245492317586 9 Q92922,Q15554,Q8TAQ2 3
103
+ Sec23, C-terminal [IPR037550] 0.6144418681682775 0.5046234500315793 0.6138233361653729 1.0 0.7052320459733932 2 Q15436 1
104
+ AP180 N-terminal homology (ANTH) domain [IPR011417] 0.6114607485922593 0.4947022734024923 0.6208102965411797 1.0 0.7108255360018253 2 Q13492 1
105
+ Heat shock protein Hsp90, N-terminal [IPR020575] 0.6122177447745418 0.4909983028215391 0.6234276479284677 1.0 0.7127286895491148 4 Q12931 1
106
+ SWIB/MDM2 domain [IPR003121] 0.6084796290162406 0.4848586446212196 0.6277766196261501 1.0 0.7170566503221973 2 Q96GM5 1
107
+ Damage-control phosphatase ARMT1-like, metal-binding domain [IPR002791] 0.6028486253726503 0.4664822180598545 0.6408703727924412 1.0 0.7287431751360229 2 Q9NVE7 1
108
+ Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain [IPR044862] 0.5276237167785438 0.4550312562267565 0.6490867525040918 1.0 0.7374274305557419 5 Q6PK18 1
109
+ F-BAR domain [IPR031160] 0.6470752967502282 0.4440047712129504 0.6570391343743378 1.0 0.7448003722693962 3 Q9UKS6 1
110
+ FCH domain [IPR001060] 0.6470752967502282 0.4440047712129504 0.6570391343743378 1.0 0.7448003722693962 3 Q9UKS6 1
111
+ Chromo/chromo shadow domain [IPR000953] 0.3963384807955109 0.4435010450807011 0.6574033634684568 1.0 0.7448816036451673 9 Q13185,P83916,Q9HC52,Q8TAQ2,P45973 5
112
+ RNA-binding S4 domain [IPR002942] 0.6451292246521014 0.4384653782878842 0.6610489623300366 1.0 0.7480680783990576 3 Q9NV31,P62701 2
113
+ Tubulin/FtsZ, GTPase domain [IPR003008] 0.4273674881232965 0.4201322919120197 0.674388813786887 1.0 0.7587246663285082 7 Q9BVA1 1
114
+ Tubulin/FtsZ, 2-layer sandwich domain [IPR018316] 0.4273674881232965 0.4201322919120197 0.674388813786887 1.0 0.7587246663285082 7 Q9BVA1 1
115
+ Ribosomal protein L18e/L15P [IPR021131] 0.6355280710338115 0.4115566374657927 0.6806644201630245 1.0 0.7645545037443995 3 Q9P015 1
116
+ Transcription factor CBF/NF-Y/archaeal histone domain [IPR003958] 0.6352219520093825 0.4107104449015535 0.6812848671588183 1.0 0.7647933297117951 3 Q9NRG0 1
117
+ GOLD domain [IPR009038] 0.5852047909102718 0.4096142686662748 0.6820889282733935 1.0 0.7653584889308329 4 Q9BVK6 1
118
+ AMP-binding enzyme, C-terminal domain [IPR025110] 0.4417001332915579 0.3945448382755925 0.6931788300655228 1.0 0.7757509016909104 6 Q6P1M0 1
119
+ Disulphide isomerase [IPR005788] 0.5083276013406195 0.3924531837615053 0.6947233963420749 1.0 0.7768296197518334 5 P30101,P13667 2
120
+ Aminoacyl-tRNA synthetase, class II [IPR006195] 0.3530654251680445 0.3804051969747661 0.7036446574568811 1.0 0.7826471375645344 11 Q9BW92,Q15046,P49591,Q9Y285 4
121
+ Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain [IPR002130] 0.33255616428437 0.3593887363705519 0.7193042997419941 1.0 0.796893545409239 14 Q9H2H8,O43447,Q8WUA2,Q96BP3,Q13356 5
122
+ 2-oxoacid dehydrogenase acyltransferase, catalytic domain [IPR001078] 0.564249671886898 0.3505998418618422 0.725888575191145 1.0 0.8019620777818767 4 P36957,O00330 2
123
+ Far upstream element-binding protein, C-terminal [IPR015096] 0.5647565419013038 0.3503850815636227 0.7260497208512278 1.0 0.8019620777818767 2 Q92945 1
124
+ ENTH domain [IPR013809] 0.611663353214046 0.3478979187348887 0.7279168483670684 1.0 0.8033273931263788 3 Q13492,Q14677 2
125
+ NOPS [IPR012975] 0.591782637508294 0.2986921312015607 0.7651749615226326 1.0 0.8375474858282987 3 P23246,Q8WXF1 2
126
+ Threonyl/alanyl tRNA synthetase, SAD [IPR012947] 0.5432458065476697 0.2955440796063398 0.7675782846279684 1.0 0.8397282353659837 4 Q9BW92 1
127
+ Poly(ADP-ribose) polymerase, regulatory domain [IPR004102] 0.5428949983438354 0.291024482484594 0.7710325951996557 1.0 0.8407062044446781 2 Q9UGN5 1
128
+ WGR domain [IPR008893] 0.5428949983438354 0.291024482484594 0.7710325951996557 1.0 0.8407062044446781 2 Q9UGN5 1
129
+ NOSIC [IPR012976] 0.583631785532226 0.2795984898921524 0.7797855658038113 1.0 0.8487960883011986 3 Q9Y2X3 1
130
+ Nop domain [IPR002687] 0.583631785532226 0.2795984898921524 0.7797855658038113 1.0 0.8487960883011986 3 Q9Y2X3 1
131
+ Tubulin binding cofactor C-like domain [IPR012945] 0.5322954620735476 0.2643587009897597 0.7915035316505472 1.0 0.8582487187318114 2 Q15814 1
132
+ CTLH, C-terminal LisH motif [IPR006595] 0.576090262254024 0.262515905086938 0.79292372473892 1.0 0.859211313588717 3 Q9NWU2 1
133
+ Guanylate kinase/L-type calcium channel beta subunit [IPR008145] 0.3605546314203762 0.2528130402964539 0.8004126902797246 1.0 0.865611781780289 8 Q5T2T1 1
134
+ Guanylate kinase-like domain [IPR008144] 0.3605546314203762 0.2528130402964539 0.8004126902797246 1.0 0.865611781780289 8 Q5T2T1 1
135
+ Zinc finger, PARP-type [IPR001510] 0.5223583968201528 0.240675457009717 0.8098066623656808 1.0 0.8728906699335408 2 P09874 1
136
+ EF hand associated, type-2 [IPR013567] 0.5163961576681158 0.227091614609081 0.820352504303103 1.0 0.881645198799367 2 Q8IXI1 1
137
+ MIRO domain [IPR020860] 0.5163961576681158 0.227091614609081 0.820352504303103 1.0 0.881645198799367 2 Q8IXI1 1
138
+ EF hand associated, type-1 [IPR013566] 0.5163961576681158 0.227091614609081 0.820352504303103 1.0 0.881645198799367 2 Q8IXI1 1
139
+ Phox homology [IPR001683] 0.3260116236347981 0.2253516242135048 0.8217057419937945 1.0 0.8827269278971313 10 O00443 1
140
+ Thiolase, N-terminal [IPR020616] 0.3871418808435592 0.2226347233604102 0.8238198092946583 1.0 0.883512374121856 6 P55084,P24752,P22307 3
141
+ Thiolase, C-terminal [IPR020617] 0.3871418808435592 0.2226347233604102 0.8238198092946583 1.0 0.883512374121856 6 P55084,P24752,P22307 3
142
+ Tyrosine-specific protein phosphatases domain [IPR000387] 0.3478265287320407 0.2122711874901119 0.831895472276591 1.0 0.8909785375947902 8 Q8WUK0,O75319 2
143
+ Peptidase M3A/M3B catalytic domain [IPR001567] 0.5520212060967518 0.2118980750368202 0.8321865523960765 1.0 0.8909785375947902 3 Q99797,P52888 2
144
+ Zinc finger, GATA-type [IPR000679] 0.4350132625994686 0.1920055893092522 0.8477378272506746 1.0 0.9061043275315774 5 O94776,Q86YP4,Q9BTC8,Q13330 4
145
+ Peripheral subunit-binding domain [IPR004167] 0.5369070483386064 0.1832602923443363 0.8545937888399247 1.0 0.91207796685189 3 O00330 1
146
+ CARP motif [IPR006599] 0.5324718356527454 0.175328702159125 0.8608213600029297 1.0 0.91547668444756 3 Q01518,Q15814 2
147
+ C-CAP/cofactor C-like domain [IPR017901] 0.5324718356527454 0.175328702159125 0.8608213600029297 1.0 0.91547668444756 3 Q01518,Q15814 2
148
+ ZU5 domain [IPR000906] 0.4845975488572497 0.1628099734667622 0.8706680553581869 1.0 0.9236859008832522 2 Q07157 1
149
+ Methyl-CpG DNA binding [IPR001739] 0.4824152472912518 0.1627474730813683 0.8707172671326808 1.0 0.9236859008832522 4 P51608 1
150
+ Chromo domain [IPR023780] 0.3453520953904235 0.1581163149170606 0.8743651448847185 1.0 0.9265081779937676 7 P83916,Q13185,P45973 3
151
+ Proteasomal ATPase OB C-terminal domain [IPR032501] 0.4048583648647913 0.1300924008532316 0.8964933222692291 1.0 0.9482642287068788 5 P43686,P62191,P62333 3
152
+ Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain [IPR020059] 0.46306724080823 0.1272023941765521 0.8987802104971594 1.0 0.9500020657010976 2 P47897 1
153
+ ELM2 domain [IPR000949] 0.4411667219091705 0.0974433301063434 0.922374335981508 1.0 0.9694782021475464 4 Q9UKL0,Q13330,Q9BTC8 3
154
+ AAA ATPase, AAA+ lid domain [IPR041569] 0.2601144443895864 0.0968704348947476 0.9228292878942548 1.0 0.9694782021475464 17 Q9ULI0,P62191,P62333,P43686,Q9Y4W6,Q96TA2,Q8NBU5 7
155
+ Matrin/U1-C, C2H2-type zinc finger [IPR000690] 0.3321780960565452 0.0966272042764798 0.923022451691144 1.0 0.9694782021475464 6 Q15428,Q12874 2
156
+ Proteasome alpha-subunit, N-terminal domain [IPR000426] 0.3176552056132558 0.0958892061527949 0.9236085673182548 1.0 0.9695150847476628 7 O14818,P60900,P28066 3
157
+ Nucleoside phosphorylase domain [IPR000845] 0.4375621066578445 0.0931186236471062 0.9258093221885246 1.0 0.9699861092007436 2 P00491 1
158
+ Transcriptional repressor p66, coiled-coil MBD2-interaction domain [IPR032346] 0.4345809870818274 0.0896856577821316 0.928537013439994 1.0 0.9720621859449936 2 Q86YP4 1
159
+ Glycosyl transferase CAP10 domain [IPR006598] 0.4703663642244305 0.0869111450156703 0.9307421406026912 1.0 0.9735700451826014 3 Q8NBL1 1
160
+ Dual specificity protein phosphatase domain [IPR020422] 0.3755792186376963 0.0825096807340031 0.9342414204722432 1.0 0.9760273518762128 5 Q8WUK0 1
161
+ Dual specificity phosphatase, catalytic domain [IPR000340] 0.3755792186376963 0.0825096807340031 0.9342414204722432 1.0 0.9760273518762128 5 Q8WUK0 1
162
+ Bicarbonate transporter, C-terminal [IPR011531] 0.4166942696257134 0.0713708426341894 0.9431026146229096 1.0 0.9832675089393644 2 Q9Y6M7 1
163
+ Band 3 cytoplasmic domain [IPR013769] 0.4166942696257134 0.0713708426341894 0.9431026146229096 1.0 0.9832675089393644 2 Q9Y6M7 1
164
+ Ricin B, lectin domain [IPR000772] 0.4155754000821899 0.067025612281671 0.9465613133916058 1.0 0.9856626191799708 4 Q10472 1
165
+ Acyl-CoA oxidase, C-terminal [IPR002655] 0.4051010268300887 0.0614790746835575 0.9509776788611906 1.0 0.9885346927850382 2 Q15067 1
166
+ Metastasis-associated protein MTA1, R1 domain [IPR035170] 0.4410205434062231 0.0591896869645298 0.9528010238519604 1.0 0.9893276536407386 3 Q13330,Q9BTC8 2
167
+ Peptidase S9A, N-terminal domain [IPR023302] 0.4011262007287306 0.0584228353778837 0.9534118258343484 1.0 0.9895582994595398 2 Q4J6C6 1
168
+ CID domain [IPR006569] 0.3075687395250658 0.0572797753914432 0.954322330797638 1.0 0.990099696092415 6 Q96P16,Q9NQG5 2
169
+ Alpha-D-phosphohexomutase, C-terminal [IPR005843] 0.3981450811527094 0.0562383340752954 0.9551519432946995 1.0 0.9905567607447272 2 O95394 1
170
+ OBG-type guanine nucleotide-binding (G) domain [IPR031167] 0.3517904509283815 0.0527449210684155 0.9579351469798044 1.0 0.9914239366709684 5 Q9Y295,Q9BZE4,A4D1E9,P55039 4
171
+ Ribosomal protein L30, N-terminal [IPR012988] 0.3792646571712575 0.0444093689577451 0.9645780936698116 1.0 0.9946601160321346 2 Q6DKI1 1
172
+ Ribosomal protein L7, eukaryotic/archaeal [IPR035808] 0.3792646571712575 0.0444093689577451 0.9645780936698116 1.0 0.9946601160321346 2 Q6DKI1 1
173
+ Ribosomal protein L30, ferredoxin-like fold domain [IPR016082] 0.3792646571712575 0.0444093689577451 0.9645780936698116 1.0 0.9946601160321346 2 Q6DKI1 1
174
+ Lamin tail domain [IPR001322] 0.4155069582504914 0.041494891729588 0.9669013651577854 1.0 0.9955941703720272 3 P02545,Q03252 2
175
+ Poly(ADP-ribose) polymerase, catalytic domain [IPR012317] 0.4118621603711014 0.0394020544133019 0.9685698419981232 1.0 0.9962158484057476 3 Q9UGN5,P09874 2
176
+ Dbl homology (DH) domain [IPR000219] 0.3643590592911675 0.0372702906160587 0.9702694936817792 1.0 0.9962158484057476 2 Q9H8V3 1
177
+ ATP-citrate lyase/succinyl-CoA ligase [IPR005811] 0.3722240636393705 0.0314184778011728 0.9749358052707788 1.0 0.9972625794372852 4 P53597,Q9P2R7,P53396 3
178
+ Malic enzyme, NAD-binding [IPR012302] 0.3448161642928243 0.0303577665423035 0.9757817267350744 1.0 0.9973264858560816 2 P23368 1
179
+ Malic enzyme, N-terminal domain [IPR012301] 0.3448161642928243 0.0303577665423035 0.9757817267350744 1.0 0.9973264858560816 2 P23368 1
180
+ Target SNARE coiled-coil homology domain [IPR000727] 0.2840712093793561 0.029168171998926 0.9767304654931748 1.0 0.9976133358563832 6 Q9UNK0,O15400 2
181
+ Ubiquitin conjugation factor E4, core [IPR019474] 0.3309042729380697 0.0268246602776001 0.9785995842355788 1.0 0.9976133358563832 2 O95155 1
182
+ 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain [IPR029154] 0.3289168598873907 0.0263996160474716 0.9789386003940272 1.0 0.9976133358563832 2 P31937 1
183
+ Zinc finger, LIM-type [IPR001781] 0.2728784883005875 0.0262440535506779 0.9790626783178764 1.0 0.9976133358563832 7 Q9UHB6,Q16527 2
184
+ Methyltransferase type 11 [IPR013216] 0.36348575215374 0.0200580581743388 0.9839970581359958 1.0 0.998354797166588 3 Q6UX53,Q6FI81 2
185
+ Copine, C2B domain [IPR037768] 0.3503974010008928 0.0199157821772293 0.9841105552853532 1.0 0.998354797166588 4 Q99829 1
186
+ Copine, C-terminal [IPR010734] 0.3503974010008928 0.0199157821772293 0.9841105552853532 1.0 0.998354797166588 4 Q99829 1
187
+ WH1/EVH1 domain [IPR000697] 0.2669758198078967 0.0197557305710191 0.9842382328704384 1.0 0.998354797166588 2 P50552 1
188
+ VASP tetramerisation [IPR014885] 0.2669758198078967 0.0197557305710191 0.9842382328704384 1.0 0.998354797166588 2 P50552 1
189
+ Mu homology domain [IPR028565] 0.344702427935431 0.0175027800991907 0.9860355149884408 1.0 0.9993815370862142 4 Q96CW1 1
190
+ Ribosomal protein L7Ae/L30e/S12e/Gadd45 [IPR004038] 0.3427245608220056 0.0167165441343482 0.9866627486946976 1.0 0.9996193227921608 4 P62888,Q9NX24,P62424 3
191
+ Phosphofructokinase domain [IPR000023] 0.3442677269715005 0.0158154515868368 0.987381621394968 1.0 0.9999497247699238 3 P17858,P08237 2
192
+ 6-phosphogluconate dehydrogenase, NADP-binding [IPR006115] 0.3290258449304122 0.0134327533198951 0.9892825358257908 1.0 1.0 3 P31937,P52209 2
193
+ Glutathione S-transferase, C-terminal [IPR004046] 0.2381268681501093 0.011723057953794 0.990646567294274 1.0 1.0 10 P21266,P78417,O43708,Q13155,P26641,P07814,O43324,P28161,P26640 9
194
+ Replication factor C, C-terminal [IPR013748] 0.30583167660702 0.0110523587429225 0.9911816731321812 1.0 1.0 3 P40937,P35249 2
195
+ Glycosyltransferase 2-like [IPR001173] 0.300629764666883 0.0052570236211458 0.9958055213368971 1.0 1.0 4 Q86SF2,O60762,Q10472 3
196
+ Peptidase S9, prolyl oligopeptidase, catalytic domain [IPR001375] 0.2900232018561456 0.0036231748680743 0.9971091310366064 1.0 1.0 4 P48147,Q4J6C6,Q86TI2 3
197
+ SWIRM domain [IPR007526] 0.2889464450635991 0.0034785873804624 0.9972244944332598 1.0 1.0 4 Q8TAQ2 1
interpro_domain/selections.json ADDED
The diff for this file is too large to render. See raw diff
 
interpro_family/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_family/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Short-chain dehydrogenase/reductase SDR [IPR002347]"}
interpro_family/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: 9e06457b7d30527af28650200ffbc43019d1f64f95e7d6c350c7551bc4bf2542
  • Pointer size: 131 Bytes
  • Size of remote file: 143 kB
interpro_family/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:efc1f49715ad41ca5915988b1181c13f8bf52e2934539e87b8d7119c44b5651d
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+ size 529499
interpro_family/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_family/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3021,
4
+ "annotations_size": 2341,
5
+ "title": "Average number of proteins per term",
6
+ "value": 1.2785134557881248
7
+ }
interpro_family/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_family/fragment/C251/C251_val_log2fc"}
interpro_family/result.tsv ADDED
@@ -0,0 +1,110 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Haem oxygenase [IPR002051] 0.9672076846637973 1.9055282059943244 0.056711444561327 1.0 0.1165596942213051 2 P30519 1
3
+ Haem oxygenase-like [IPR016053] 0.9672076846637973 1.9055282059943244 0.056711444561327 1.0 0.1165596942213051 2 P30519 1
4
+ OCIA domain-containing protein 1/2 [IPR040187] 0.965220271613118 1.897441196696257 0.0577697327898603 1.0 0.1178579347541904 2 Q56VL3 1
5
+ Short-chain dehydrogenase/reductase SDR [IPR002347] 0.535527106276485 1.8756140610465544 0.0607082942045744 1.0 0.1219897997707371 19 Q53GQ0,Q96LJ7,Q9Y394,P35270,Q3SXM5,Q8NBN7 6
6
+ Cleft lip and palate transmembrane 1 [IPR008429] 0.953627028817491 1.8501909944762376 0.0642860264683302 1.0 0.1271060709141563 2 Q96KA5 1
7
+ Cleft lip and palate transmembrane protein 1-like protein [IPR030434] 0.953627028817491 1.8501909944762376 0.0642860264683302 1.0 0.1271060709141563 2 Q96KA5 1
8
+ Nuclear pore protein POM121 [IPR026090] 0.950314673733026 1.8366678771992744 0.0662589401780029 1.0 0.1295332163823319 2 A8CG34 1
9
+ Mitochondrial carrier UCP-like [IPR002030] 0.9436899635640956 1.8095922755493976 0.0703590386914991 1.0 0.1351193679875304 2 Q9H2D1 1
10
+ Adenylate kinase 3/4, mitochondrial [IPR028586] 0.9324279562769144 1.7634783758533277 0.0778198412471984 1.0 0.1446991647018995 2 P27144 1
11
+ Integral membrane protein EMC3/TMCO1-like [IPR002809] 0.9125538257701246 1.6818656545154933 0.092594893993581 1.0 0.1649654846567528 2 Q9P0I2 1
12
+ Derlin [IPR007599] 0.9118913547532314 1.6791406040909729 0.0931246444397055 1.0 0.1655313535560749 2 Q9BUN8 1
13
+ THRAP3/BCLAF1 family [IPR029199] 0.8936734017886738 1.6041035648800488 0.1086912262452377 1.0 0.1864474104065399 2 Q9NYF8 1
14
+ Sulfotransferase [IPR005331] 0.8916859887379927 1.5959075402339338 0.1105094378206552 1.0 0.1882842750641586 2 Q8NCH0 1
15
+ Mitochondrial inner membrane translocase complex, subunit Tim17 [IPR005678] 0.8678370321298491 1.4974454764514746 0.1342773827011465 1.0 0.2161588219124382 2 Q99595 1
16
+ Adenylate kinase/UMP-CMP kinase [IPR000850] 0.7870695232076061 1.4636766468757605 0.143282319210938 1.0 0.2269444582359986 5 P27144,Q9UIJ7 2
17
+ Nuclear pore complex protein [IPR026054] 0.8802415415337524 1.4548658169284283 0.1457064128011067 1.0 0.2296961026043036 4 A8CG34 1
18
+ Sodium/potassium-transporting ATPase subunit beta [IPR000402] 0.8572374958595578 1.4536449812752907 0.1460447591929072 1.0 0.2300403568831389 2 P05026 1
19
+ Mitochondrial carrier protein [IPR002067] 0.5491540405651953 1.4157964928799351 0.1568350967235279 1.0 0.2421840114972156 11 Q9HC21,Q9BQT8,O43808 3
20
+ Cytochrome P450 [IPR001128] 0.8476316661146105 1.413947789663234 0.1573772327331863 1.0 0.2425412125269185 2 Q16850 1
21
+ Sulfurtransferase TST/MPST-like [IPR045078] 0.8449817820470393 1.4029980641655484 0.1606174162084257 1.0 0.2459158739986426 2 P25325 1
22
+ Ribosomal protein L25/L23 [IPR013025] 0.8446505465385927 1.401629415977577 0.161025938146802 1.0 0.2462384019425836 2 Q16540 1
23
+ P-type ATPase [IPR001757] 0.6762458086415295 1.3772221668145144 0.1684435704728615 1.0 0.2539126841448608 6 P05023,P16615 2
24
+ Bcl2-like [IPR002475] 0.837363365352771 1.371524397533789 0.1702115433698969 1.0 0.2553309932032432 2 Q9BXK5 1
25
+ Bcl-2 family [IPR026298] 0.837363365352771 1.371524397533789 0.1702115433698969 1.0 0.2553309932032432 2 Q9BXK5 1
26
+ TB2/DP1/HVA22-related protein [IPR004345] 0.9052352551358652 1.3229175720326247 0.1858627909987309 1.0 0.2714315619014529 3 Q00765,Q9H6H4 2
27
+ Eukaryotic porin/Tom40 [IPR027246] 0.8442161087172656 1.3192864890458784 0.1870733530010351 1.0 0.2723499498603378 4 Q9Y277,O96008,P21796 3
28
+ Adenylate kinase subfamily [IPR006259] 0.8820410868124656 1.238413466497262 0.2155627898900061 1.0 0.3029006549414791 3 P27144,Q9UIJ7 2
29
+ Endoplasmic reticulum vesicle transporter [IPR045888] 0.7999337528983179 1.2172632740923166 0.2235040628001323 1.0 0.3095994148018401 2 Q9Y282 1
30
+ Ribosomal protein L22/L17 [IPR001063] 0.7972838688307415 1.2063810646273276 0.2276705936982452 1.0 0.3138140128736399 2 Q9NWU5 1
31
+ Histidine phosphatase superfamily, clade-1 [IPR013078] 0.7946339847631694 1.1955060416827643 0.2318893771486312 1.0 0.3178296439724506 2 P18669 1
32
+ Translin family [IPR002848] 0.7936402782378319 1.1914298449469631 0.233484882397237 1.0 0.3194553534143378 2 Q15631 1
33
+ Prefoldin alpha-like [IPR004127] 0.7913216296787047 1.181922999528889 0.2372362551051887 1.0 0.3232654675210983 2 Q99471 1
34
+ Sec1-like protein [IPR001619] 0.5987045253833586 1.1656179852111934 0.2437689328965815 1.0 0.328533720155957 7 Q8WU76,Q96AX1 2
35
+ 2-oxoglutarate dehydrogenase E1 component [IPR011603] 0.7780722093408449 1.1277264190535916 0.2594354766684215 1.0 0.3447689807581041 2 Q96HY7 1
36
+ Major facilitator superfamily [IPR011701] 0.7923651102752645 1.124591027787534 0.260762377463972 1.0 0.3462252757101822 4 Q14728,Q96ES6 2
37
+ Glutathione Transferase family [IPR040079] 0.5145373952279496 1.1185106073957745 0.2633489787349143 1.0 0.3483050617053302 10 Q9H7Z7,O75431,O43708 3
38
+ Pyrroline-5-carboxylate reductase [IPR000304] 0.7744286187479335 1.112865410149382 0.2657662377133092 1.0 0.3507095617175066 2 P32322 1
39
+ Fumarate lyase family [IPR000362] 0.7731036767141491 1.107466514934948 0.2680922818754361 1.0 0.3527847284263046 2 P07954 1
40
+ Porin, eukaryotic type [IPR001925] 0.843936381709752 1.1002984221057448 0.2712021194226262 1.0 0.3553533122044143 3 Q9Y277,P21796 2
41
+ Peptidase M20 [IPR002933] 0.7704537926465754 1.0966772474915711 0.2727825059440532 1.0 0.3564710328782833 2 Q96KP4 1
42
+ Aldo-keto reductase [IPR020471] 0.7661477310367729 1.0791700313050971 0.2805119366965094 1.0 0.3626054355640687 2 P14550 1
43
+ Mitofusin family [IPR027094] 0.7654852600198798 1.0764795120846604 0.2817128589072917 1.0 0.3637560963607114 2 Q8IWA4 1
44
+ Peptidase, FtsH [IPR005936] 0.7608479629016277 1.0576686148798922 0.2902065486395146 1.0 0.370432677407363 2 Q96TA2 1
45
+ F-actin-capping protein subunit alpha [IPR002189] 0.7509108976482325 1.0175041286662911 0.3089136692035088 1.0 0.386927180099205 2 P52907 1
46
+ TAF15/EWS/TLS family [IPR034870] 0.8124585818422886 0.9874212288940408 0.3234361815015405 1.0 0.3997698526373318 3 Q92804,Q01844 2
47
+ Dephospho-CoA kinase [IPR001977] 0.7429612454455166 0.9855305069112604 0.3243635540407057 1.0 0.4007045277093889 2 Q8WVC6 1
48
+ Synaptobrevin [IPR001388] 0.7409738323948378 0.9775610895725207 0.3282914498180584 1.0 0.4036942285982262 2 O75396 1
49
+ Erlin1/2 [IPR033294] 0.7326929446836753 0.9444669474657426 0.3449310844287727 1.0 0.4186022128811596 2 O75477 1
50
+ Prohibitin [IPR000163] 0.7230871149387272 0.9063231633191816 0.3647648287531515 1.0 0.4348067466068974 2 Q99623 1
51
+ NSF attachment protein [IPR000744] 0.7191122888373693 0.8906236720776093 0.373131095302555 1.0 0.4418310035929597 2 P54920 1
52
+ Luc7-related [IPR004882] 0.7741522437374941 0.8525136562022357 0.3939290627583869 1.0 0.4587999681181013 3 Q9Y383 1
53
+ Paraneoplastic encephalomyelitis antigen [IPR002343] 0.7068565750248488 0.8425593350411691 0.3994749420006225 1.0 0.4638744242179847 2 O95319 1
54
+ Transmembrane emp24 domain-containing protein [IPR015720] 0.7641291123710756 0.817815189323674 0.4134627234896713 1.0 0.4753410975293233 3 Q9BVK6 1
55
+ Ribosomal protein L15 [IPR030878] 0.6985756873136866 0.8104038466357031 0.4177081077836129 1.0 0.4781776250275592 2 Q9P015 1
56
+ Ribosomal protein S11 [IPR001971] 0.6975819807883474 0.8065639199609523 0.4199177676809675 1.0 0.4797596359888458 2 P82912 1
57
+ Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like [IPR044666] 0.6218328427328326 0.7986865490201853 0.4244721882054367 1.0 0.4830770017447386 5 Q96BP3,Q13356,Q9H2H8 3
58
+ Serine-tRNA ligase, type1 [IPR002317] 0.6929446836700963 0.7886999353410421 0.4302874057278716 1.0 0.486730045942383 2 P49591 1
59
+ Isocitrate dehydrogenase NAD-dependent [IPR004434] 0.7398939695162494 0.7352293305503488 0.4621998389566295 1.0 0.5120727983897159 3 O43837,P50213 2
60
+ Exosome complex RNA-binding protein 1/RRP40/RRP4 [IPR026699] 0.6700894335872882 0.7021303611877523 0.482597869639459 1.0 0.5262047567889957 2 Q13868 1
61
+ G-protein alpha subunit, group I [IPR001408] 0.7243207422134081 0.6833027426097805 0.4944155615054473 1.0 0.5360939460325392 3 P63096,P04899 2
62
+ Ras GTPase-activating protein-binding protein [IPR039539] 0.661146074859233 0.6690043897637 0.5034926777313973 1.0 0.5436699070891149 2 Q13283 1
63
+ Macrophage migration inhibitory factor [IPR001398] 0.6575024842663217 0.6556428818299854 0.5120539276972877 1.0 0.5508815462956574 2 P30046 1
64
+ Plakophilin/Delta catenin [IPR028435] 0.7147117296222638 0.651776114606862 0.5145456123564327 1.0 0.5533078909170459 3 Q99959,O00192 2
65
+ Ribosomal protein S8e/ribosomal biogenesis NSA2 [IPR022309] 0.6561775422325357 0.6508042124940984 0.5151728806054283 1.0 0.5537280594569824 2 O95478 1
66
+ ATP:guanido phosphotransferase [IPR000749] 0.6472341835044804 0.6184343059369871 0.536289089740213 1.0 0.5753679005874605 2 P12532 1
67
+ Dynein light chain, type 1/2 [IPR001372] 0.6313348790990486 0.5622334612784858 0.5739569661432538 1.0 0.6132511445647454 2 P63167 1
68
+ 14-3-3 protein [IPR000308] 0.5556649182530633 0.5515793028133877 0.5812366199536929 1.0 0.6207458609998153 5 P31946,P63104,Q04917 3
69
+ Ribosomal protein S5/S7 [IPR000235] 0.6270288174892443 0.5473323301127903 0.5841504363518357 1.0 0.6235732656177143 2 P46782 1
70
+ Cyclophilin-type peptidyl-prolyl cis-trans isomerase [IPR024936] 0.6809145129224621 0.544531777228438 0.5860755872835122 1.0 0.6253431858845497 3 Q9H2H8,O43447 2
71
+ Protein transport protein Sec23 [IPR037364] 0.6144418681682775 0.5046234500315793 0.6138233361653729 1.0 0.6519784164987014 2 Q15436 1
72
+ Heat shock protein Hsp90 family [IPR001404] 0.6122177447745418 0.4909983028215391 0.6234276479284677 1.0 0.6615793852223676 4 Q12931 1
73
+ Ribosomal protein L1/ribosomal biogenesis protein [IPR028364] 0.6545574590512927 0.4655604197359113 0.641530179646514 1.0 0.6795575341866468 3 P62906 1
74
+ Protein disulphide isomerase [IPR005792] 0.6481113320079488 0.4469652344447703 0.6549001616806331 1.0 0.6930928022126411 3 P30101,P13667 2
75
+ Beta tubulin [IPR002453] 0.4273674881232965 0.4201322919120197 0.674388813786887 1.0 0.7105059464784439 7 Q9BVA1 1
76
+ Tubulin [IPR000217] 0.4273674881232965 0.4201322919120197 0.674388813786887 1.0 0.7105059464784439 7 Q9BVA1 1
77
+ Heterogeneous nuclear ribonucleoprotein C [IPR017347] 0.582974494865861 0.4040349324806654 0.6861870315177159 1.0 0.7219612767563923 2 Q9UKM9 1
78
+ Guanine nucleotide binding protein (G-protein), alpha subunit [IPR001019] 0.5116480462489706 0.4029723162062056 0.6869685902889393 1.0 0.7224588813416024 5 P63096,P04899 2
79
+ Prefoldin beta-like [IPR002777] 0.5455448824114073 0.2979118931348866 0.765770410476786 1.0 0.7995845365415504 2 Q9UHV9 1
80
+ Mitochondrial Rho GTPase [IPR021181] 0.5163961576681158 0.227091614609081 0.820352504303103 1.0 0.8505071800591515 2 Q8IXI1 1
81
+ Cell-cycle alteration and expression-elevated protein in tumour [IPR032337] 0.5537051740296124 0.2152413175252466 0.8295791790434974 1.0 0.8589318258031081 3 Q9NQG5 1
82
+ Peptidase M3A/M3B [IPR045090] 0.5520212060967518 0.2118980750368202 0.8321865523960765 1.0 0.861250538974012 3 Q99797,P52888 2
83
+ Formate-tetrahydrofolate ligase, FTHFS [IPR000559] 0.4922159655515198 0.176942974663483 0.8595531822640021 1.0 0.8868285586954733 2 P11586 1
84
+ 26S proteasome regulatory subunit P45-like [IPR005937] 0.3678914124242762 0.1726167568569253 0.8629526795550642 1.0 0.8892613706184296 6 P43686,P62191,P62333,P17980 4
85
+ Histidine phosphatase superfamily, clade-2 [IPR000560] 0.5306670378633158 0.1721629350737424 0.8633094362713367 1.0 0.8892613706184296 3 Q9UNW1 1
86
+ Peptidase M24, methionine aminopeptidase [IPR001714] 0.4650546538589096 0.130222821572662 0.8963901393144034 1.0 0.920776356355866 2 P50579 1
87
+ UDPGP family [IPR002618] 0.4554488241139557 0.1161191864634299 0.9075580830756856 1.0 0.9301620453088884 2 Q16222 1
88
+ Proteasome alpha-type subunit [IPR023332] 0.3176552056132558 0.0958892061527949 0.9236085673182548 1.0 0.9439295410382146 7 O14818,P60900,P28066 3
89
+ Syntaxin [IPR045242] 0.436906796168803 0.091856669594115 0.9268119185076844 1.0 0.9466259603955014 4 Q9UNK0,O15400 2
90
+ Transcriptional repressor p66 [IPR040386] 0.4345809870818274 0.0896856577821316 0.928537013439994 1.0 0.9479743342621132 2 Q86YP4 1
91
+ HAD-superfamily hydrolase, subfamily IIA [IPR006357] 0.4651675823523146 0.0813801834397063 0.9351396081565432 1.0 0.9542989636854698 3 Q9H0R4 1
92
+ Bicarbonate transporter, eukaryotic [IPR003020] 0.4166942696257134 0.0713708426341894 0.9431026146229096 1.0 0.9608058260266096 2 Q9Y6M7 1
93
+ Long-chain fatty acid CoA synthetase, eukaryotic [IPR045311] 0.4150380920834809 0.0698658988937185 0.9443003955196124 1.0 0.9611335764832228 2 Q9UKU0 1
94
+ Aminoacyl-tRNA synthetase, class Ic [IPR002305] 0.4443339960238508 0.0619057567101654 0.9506378831015476 1.0 0.966669017027376 3 P23381,P54577 2
95
+ Peroxisomal acyl-coenzyme A oxidase [IPR034171] 0.4051010268300887 0.0614790746835575 0.9509776788611906 1.0 0.966669017027376 2 Q15067 1
96
+ Acyl-CoA oxidase [IPR012258] 0.4051010268300887 0.0614790746835575 0.9509776788611906 1.0 0.966669017027376 2 Q15067 1
97
+ Mesoderm induction early response protein/metastasis-associated protein [IPR040138] 0.4410205434062231 0.0591896869645298 0.9528010238519604 1.0 0.9676820810574576 3 Q13330,Q9BTC8 2
98
+ Peptidase S9A, prolyl oligopeptidase [IPR002470] 0.4011262007287306 0.0584228353778837 0.9534118258343484 1.0 0.9678825170330484 2 Q4J6C6 1
99
+ Ribosomal protein L7/L30 [IPR039699] 0.3792646571712575 0.0444093689577451 0.9645780936698116 1.0 0.9762547848167008 2 Q6DKI1 1
100
+ Ribosomal protein L7, eukaryotic [IPR005998] 0.3792646571712575 0.0444093689577451 0.9645780936698116 1.0 0.9762547848167008 2 Q6DKI1 1
101
+ Malic oxidoreductase [IPR001891] 0.3448161642928243 0.0303577665423035 0.9757817267350744 1.0 0.9858890903266332 2 P23368 1
102
+ Ribosomal protein L3 [IPR000597] 0.3345478635309813 0.0276530133604529 0.9779388992632334 1.0 0.9868804292349764 2 P39023 1
103
+ Ubiquitin conjugation factor E4 [IPR045132] 0.3309042729380697 0.0268246602776001 0.9785995842355788 1.0 0.9870321528201164 2 O95155 1
104
+ HnRNP R/Q splicing factor [IPR006535] 0.3807157057654006 0.025334187235304 0.9797884052053936 1.0 0.987380394569878 3 O43390,A0AV96 2
105
+ Clathrin adaptor, mu subunit [IPR001392] 0.3690683409448957 0.0215996375332731 0.9827673226716976 1.0 0.9895304526341694 3 Q96CW1 1
106
+ Copine [IPR045052] 0.3503974010008928 0.0199157821772293 0.9841105552853532 1.0 0.9900666795836708 4 Q99829 1
107
+ Tricarboxylate/iron carrier [IPR004686] 0.3627716186490319 0.0198716834193746 0.9841457340415216 1.0 0.9900666795836708 3 Q96NB2 1
108
+ ATP-dependent 6-phosphofructokinase [IPR022953] 0.3442677269715005 0.0158154515868368 0.987381621394968 1.0 0.9916174927866238 3 P17858,P08237 2
109
+ ATP-dependent 6-phosphofructokinase, vertebrate-type [IPR041914] 0.3442677269715005 0.0158154515868368 0.987381621394968 1.0 0.9916174927866238 3 P17858,P08237 2
110
+ ATP-dependent 6-phosphofructokinase, eukaryotic-type [IPR009161] 0.3442677269715005 0.0158154515868368 0.987381621394968 1.0 0.9916174927866238 3 P17858,P08237 2
interpro_family/selections.json ADDED
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interpro_homologous_superfamily/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Mitochondrial carrier domain superfamily [IPR023395]", "1": "Thioredoxin-like superfamily [IPR036249]"}