ligdis commited on
Commit
fc521e3
·
verified ·
1 Parent(s): 6449565

Upload folder using huggingface_hub

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. interpro_active_site/advanced/idx2term.json +1 -0
  2. interpro_active_site/basic/idx2term.json +1 -0
  3. interpro_active_site/basic/plot_0.png +3 -0
  4. interpro_active_site/consensus.joblib +3 -0
  5. interpro_active_site/df_merge.tsv +1 -0
  6. interpro_active_site/metrics.json +7 -0
  7. interpro_active_site/paths.json +1 -0
  8. interpro_active_site/result.tsv +8 -0
  9. interpro_active_site/selections.json +1 -0
  10. interpro_binding_site/advanced/idx2term.json +1 -0
  11. interpro_binding_site/basic/idx2term.json +1 -0
  12. interpro_binding_site/basic/plot_0.png +3 -0
  13. interpro_binding_site/consensus.joblib +3 -0
  14. interpro_binding_site/df_merge.tsv +1 -0
  15. interpro_binding_site/metrics.json +7 -0
  16. interpro_binding_site/paths.json +1 -0
  17. interpro_binding_site/result.tsv +5 -0
  18. interpro_binding_site/selections.json +1 -0
  19. interpro_conserved_site/advanced/idx2term.json +1 -0
  20. interpro_conserved_site/basic/idx2term.json +1 -0
  21. interpro_conserved_site/basic/plot_0.png +3 -0
  22. interpro_conserved_site/basic/plot_1.png +3 -0
  23. interpro_conserved_site/basic/plot_2.png +3 -0
  24. interpro_conserved_site/basic/plot_3.png +3 -0
  25. interpro_conserved_site/consensus.joblib +3 -0
  26. interpro_conserved_site/df_merge.tsv +2 -0
  27. interpro_conserved_site/metrics.json +7 -0
  28. interpro_conserved_site/paths.json +1 -0
  29. interpro_conserved_site/result.tsv +37 -0
  30. interpro_conserved_site/selections.json +1 -0
  31. interpro_domain/advanced/idx2term.json +1 -0
  32. interpro_domain/basic/idx2term.json +1 -0
  33. interpro_domain/basic/plot_0.png +3 -0
  34. interpro_domain/basic/plot_1.png +3 -0
  35. interpro_domain/basic/plot_10.png +3 -0
  36. interpro_domain/basic/plot_11.png +3 -0
  37. interpro_domain/basic/plot_12.png +3 -0
  38. interpro_domain/basic/plot_13.png +3 -0
  39. interpro_domain/basic/plot_14.png +3 -0
  40. interpro_domain/basic/plot_15.png +3 -0
  41. interpro_domain/basic/plot_16.png +3 -0
  42. interpro_domain/basic/plot_17.png +3 -0
  43. interpro_domain/basic/plot_18.png +3 -0
  44. interpro_domain/basic/plot_19.png +3 -0
  45. interpro_domain/basic/plot_2.png +3 -0
  46. interpro_domain/basic/plot_20.png +3 -0
  47. interpro_domain/basic/plot_21.png +3 -0
  48. interpro_domain/basic/plot_22.png +3 -0
  49. interpro_domain/basic/plot_23.png +3 -0
  50. interpro_domain/basic/plot_24.png +3 -0
interpro_active_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_active_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Serine/threonine-protein kinase, active site [IPR008271]"}
interpro_active_site/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: e0f44782c01262b34f8ef785b87379553fd2a88bf6d05db062852b302f818a24
  • Pointer size: 131 Bytes
  • Size of remote file: 156 kB
interpro_active_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0719bfabd5a1203c59f846e2ce59e53963243ede4b35a0146884e05a5f83eb95
3
+ size 73284
interpro_active_site/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_50 pval_100 pval_250 pval_500
interpro_active_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3250,
4
+ "annotations_size": 55,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.709090909090909
7
+ }
interpro_active_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C268/C268_val_log2fc"}
interpro_active_site/result.tsv ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Nucleoside diphosphate kinase, active site [IPR023005] 0.7928210311567958 1.2093035082566277 0.2265462635417767 0.9999992690480984 0.6978633727945465 3 Q13232 1
3
+ Ubiquitin-activating enzyme E1, Cys active site [IPR033127] 0.7139221955750751 0.9249815754272752 0.3549754913973479 0.9999999999663728 0.7809460810741655 3 Q8TBC4 1
4
+ Serine/threonine-protein kinase, active site [IPR008271] 0.3067725019416907 0.6241231757668985 0.5325466947172037 1.0 0.954001291832157 48 Q13177,P48729,Q96GX5,P19784,Q9H2G2,P33981,O15111,Q00534,P27361,Q7L7X3,Q7KZI7,Q96KB5,O14976,Q13464,P28482,Q6PHR2,Q99986,P54646 18
5
+ Protein-tyrosine phosphatase, active site [IPR016130] 0.4467481009516918 0.361314729871062 0.7178641835980555 1.0 0.954001291832157 5 Q06124,Q9H3S7 2
6
+ Ubiquitin-conjugating enzyme, active site [IPR023313] 0.3796398851184211 0.1798019151248605 0.857308080069219 1.0 0.954001291832157 5 Q16763,P61086 2
7
+ ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440] 0.6092980295566434 0.1454547925742164 0.8843518063793212 1.0 0.954001291832157 2 P53597 1
8
+ Peptidase S9, serine active site [IPR002471] 0.5489532019704352 0.0794737452530364 0.936655813798845 1.0 0.954001291832157 2 P13798 1
interpro_active_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["ATP synthase, F0 complex, subunit A, active site [IPR023011]", "ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "DNA topoisomerase, type IA, active site [IPR023406]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycoside hydrolase, family 2, active site [IPR023232]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-CoA lyase, active site [IPR000138]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Peptidase family C14A, His active site [IPR016129]", "Peptidase family C14A, cysteine active site [IPR033139]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]", "Uracil-DNA glycosylase, active site [IPR018085]"], "available_proteins": ["ACAA1", "ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "AKT2", "APEH", "ARAF", "ATP5A1", "ATP5B", "ATP6", "ATP6V1A", "ATP6V1B2", "AURKA", "BLMH", "BUB1", "CAMK2G", "CAPN1", "CAPN2", "CASP2", "CASP7", "CDK1", "CDK11B", "CDK13", "CDK2", "CDK4", "CDK5", "CDK6", "CDK9", "CHUK", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "CTSB", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "EPHA7", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLUD1", "GSK3B", "GSR", "GUSB", "HADHB", "HMGCL", "HMGCS1", "LDHA", "LDHB", "LONP1", "LYN", "MAP2K1", "MAPK1", "MAPK3", "MAPK9", "MARK2", "MASTL", "MDH1", "MDH2", "NEK9", "NME1", "NME3", "NME6", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKN2", "PLK1", "PREP", "PRKAA2", "PRKCB", "PRKCD", "PRPF4B", "PTK7", "PTPN1", "PTPN11", "PTPN23", "PTPRF", "RIPK1", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "RRM2", "RRM2B", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SRPK2", "SUCLG1", "TALDO1", "TAOK1", "TIGAR", "TOP1", "TOP3A", "TPI1", "TPP2", "TTK", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "ULK3", "UMPS", "UNG", "VRK1", "WNK1"], "leading_proteins": ["APEH", "CDK6", "CHUK", "CSNK1A1", "CSNK2A2", "GAK", "MAPK1", "MAPK3", "MARK2", "MASTL", "NME3", "PAK2", "PBK", "PRKAA2", "PTPN11", "PTPN23", "ROCK1", "SLK", "SUCLG1", "TAOK1", "TTK", "UBA3", "UBE2K", "UBE2S", "ULK3", "VRK1"]}
interpro_binding_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_binding_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Protein kinase, ATP binding site [IPR017441]"}
interpro_binding_site/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: 864d4c5605c6b93b4952a6962f28c9747b3ae062d9bdbe61361833169328895b
  • Pointer size: 131 Bytes
  • Size of remote file: 150 kB
interpro_binding_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4ab9755449a83d45b31ae166c1619c052040c901a41386eaf423acc912ade53b
3
+ size 72266
interpro_binding_site/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_50 pval_100 pval_250 pval_500
interpro_binding_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3250,
4
+ "annotations_size": 32,
5
+ "title": "Average number of proteins per term",
6
+ "value": 4.6875
7
+ }
interpro_binding_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C268/C268_val_log2fc"}
interpro_binding_site/result.tsv ADDED
@@ -0,0 +1,5 @@
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Beta tubulin, autoregulation binding site [IPR013838] 0.7488307680258356 1.711453226614652 0.0869974786163019 0.9456620486241551 0.5970713609763039 6 P04350,Q9BUF5,Q9BVA1 3
3
+ IQ motif, EF-hand binding site [IPR000048] 0.6157165066902639 1.4951203183676534 0.1348830440385215 0.9903084247671106 0.6213383530054882 11 O00159,Q92614,Q13576,O43795 4
4
+ Protein kinase, ATP binding site [IPR017441] 0.3768839499225849 0.9481657737857864 0.3430450681432495 0.9999985507661364 0.8361068948834491 44 P33981,Q00534,Q7L7X3,Q16539,P28482,Q9P289,Q6PHR2 7
5
+ PPM-type phosphatase, divalent cation binding [IPR000222] 0.6544502617801045 0.718420044032538 0.472498331538921 0.9999999987082966 0.8894086240732632 3 P49593,O15355 2
interpro_binding_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Aryldialkylphosphatase, zinc-binding site [IPR017947]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]", "Ureohydrolase, manganese-binding site [IPR020855]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT2", "APEX1", "APOBEC3C", "ARAF", "ARG2", "AURKA", "BPNT1", "BUB1", "CALM3", "CALU", "CAMK2G", "CAPN1", "CAPN2", "CAPNS1", "CDK1", "CDK13", "CDK2", "CDK4", "CDK5", "CDK6", "CDK9", "CETN2", "CHUK", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DBT", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "EPHA7", "EPS15", "EPS15L1", "FKBP10", "FKBP14", "FKBP7", "FKBP9", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3B", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "IQGAP2", "ITSN2", "LETM1", "LYN", "MACF1", "MAP2K1", "MAPK1", "MAPK14", "MAPK3", "MARK2", "MCCC1", "METAP2", "MICU1", "MYH10", "MYH14", "MYH9", "MYO18A", "MYO1B", "MYO1C", "MYO1D", "MYO9B", "NFS1", "NRDC", "NUCB1", "NUCB2", "PA2G4", "PAK2", "PC", "PCCA", "PDCD6", "PDHX", "PEF1", "PGD", "PKN2", "PLCG1", "PLK1", "PLS1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1F", "PPM1G", "PRKAA2", "PRKCB", "PRKCD", "PRKCSH", "PSAT1", "PTER", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK1", "ROCK2", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "SRPK2", "STK26", "STK4", "TAOK1", "TKT", "TTK", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "ULK3", "UQCRC2", "USP32", "VRK1"], "leading_proteins": ["CDK6", "IQGAP2", "MAPK1", "MAPK14", "MYO18A", "MYO1B", "MYO1C", "PPM1F", "PPM1G", "STK26", "TAOK1", "TTK", "TUBB2B", "TUBB4A", "TUBB6", "ULK3"]}
interpro_conserved_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_conserved_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Kinesin motor domain, conserved site [IPR019821]", "1": "WD40 repeat, conserved site [IPR019775]", "2": "Tr-type G domain, conserved site [IPR031157]", "3": "Actinin-type actin-binding domain, conserved site [IPR001589]"}
interpro_conserved_site/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: 8ae93b69fcad1cf04caa97295992aa14d6f0807538a53c85220bee5ef0e63b5c
  • Pointer size: 131 Bytes
  • Size of remote file: 141 kB
interpro_conserved_site/basic/plot_1.png ADDED

Git LFS Details

  • SHA256: 9467607cf4a98b41b996bc074c909bb87493b62132ba5a490dba1b626eb18ded
  • Pointer size: 131 Bytes
  • Size of remote file: 155 kB
interpro_conserved_site/basic/plot_2.png ADDED

Git LFS Details

  • SHA256: ebf2e34db2a0217ebcf474c3de8f0a3842943dfc9127499908025624f110f9f8
  • Pointer size: 131 Bytes
  • Size of remote file: 148 kB
interpro_conserved_site/basic/plot_3.png ADDED

Git LFS Details

  • SHA256: 0db5b21be91aedf9bf493caf055b4c5f064bf34d143d3605b71d33bc2566d830
  • Pointer size: 131 Bytes
  • Size of remote file: 153 kB
interpro_conserved_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7d31cb5febfd187dc617602c4c72afcd8b5d41ca8d0efff4cd97c89fd95b1f35
3
+ size 84841
interpro_conserved_site/df_merge.tsv ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_50 pval_100 pval_250 pval_500
2
+ Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818] 1 5 2.038208031287996 0.0415291326603091 1.8349514563106797 4.495145631067961 -0.0268416016144192 0.3268992301433215 1.18113888908689 0.4999764345469411 1.4254920509394828 0.309635855483207 0.0002241871259369 0.0009157120850054 0.0055694485300755 0.0214122317398669
interpro_conserved_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3250,
4
+ "annotations_size": 280,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.6964285714285716
7
+ }
interpro_conserved_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C268/C268_val_log2fc"}
interpro_conserved_site/result.tsv ADDED
@@ -0,0 +1,37 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818] 0.8796999466834003 2.038208031287996 0.0415291326603091 0.999993048207873 0.3922045723597793 5 P48735 1
3
+ Kinesin motor domain, conserved site [IPR019821] 0.6781095413894144 1.8077626061421157 0.0706434559839688 0.9999999987667214 0.466833441482315 12 O00139,Q96Q89,O95239,Q9BW19,Q9Y496,Q14807 6
4
+ Zinc finger, RING-type, conserved site [IPR017907] 0.6644169242009538 1.740929983376322 0.0816958522594051 0.9999999999567254 0.466833441482315 12 O95376,O15164,P19474 3
5
+ Tubulin, conserved site [IPR017975] 0.7488307680258356 1.711453226614652 0.0869974786163019 0.9999999999914464 0.4776332159326379 6 P04350,Q9BUF5,Q9BVA1 3
6
+ Clathrin adaptor complex, small chain [IPR000804] 0.8930886860634606 1.574152773894237 0.1154521343812609 0.9999999999999988 0.5051030879180164 3 P61966 1
7
+ Mitogen-activated protein (MAP) kinase, conserved site [IPR003527] 0.7701978919978018 1.4293538793892464 0.1529025472526655 1.0 0.6111594869660275 4 P28482,Q16539 2
8
+ Ubiquitin interacting motif [IPR003903] 0.7566322157777472 1.3774051327997348 0.1683870268477498 1.0 0.6286449002315995 4 Q9Y6I3 1
9
+ Ubiquitin specific protease, conserved site [IPR018200] 0.5537928230953032 1.1918035305151715 0.2333382911325487 1.0 0.7589140060406234 12 P51784,Q8NFA0 2
10
+ Hexapeptide transferase, conserved site [IPR018357] 0.9048645320197032 0.901455149500734 0.3673463701905648 1.0 0.8791195184047704 2 Q9Y5P6 1
11
+ Guanylate kinase, conserved site [IPR020590] 0.5148584396312608 0.8019080592270637 0.4226061438688924 1.0 0.922315923529614 7 Q14168,Q9NZW5,Q8N3R9,Q5T2T1 4
12
+ Immunoglobulin/major histocompatibility complex, conserved site [IPR003006] 0.8500615763546779 0.7229358533865923 0.4697192949529585 1.0 0.9589844765364884 2 P01889 1
13
+ HMG box A DNA-binding domain, conserved site [IPR017967] 0.614105327995075 0.585586873995587 0.5581531712232404 1.0 0.9900639565974648 3 P26583,P09429 2
14
+ Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131] 0.8032635467980269 0.5795547880431562 0.5622148896392747 1.0 0.9900639565974648 2 P12955 1
15
+ DNA-directed DNA polymerase, family B, conserved site [IPR017964] 0.7838669950738885 0.5233539917368621 0.6007279348173507 1.0 1.0 2 P09884 1
16
+ Phosphofructokinase, conserved site [IPR015912] 0.5509701262704142 0.3965588335853727 0.6916928146162036 1.0 1.0 3 P08237,P17858 2
17
+ Thiosulphate sulfurtransferase, conserved site [IPR001307] 0.731834975369454 0.3843650898269127 0.7007078712458914 1.0 1.0 2 Q16762 1
18
+ Procollagen-lysine 5-dioxygenase, conserved site [IPR001006] 0.5352633199876975 0.3542164358026975 0.7231766871011163 1.0 1.0 3 Q02809,O60568 2
19
+ Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842] 0.7142857142857095 0.3419602318392165 0.7323808204251503 1.0 1.0 2 P11908 1
20
+ Phosphatidylinositol 3/4-kinase, conserved site [IPR018936] 0.4383882777568867 0.3357000114694656 0.7370970971722874 1.0 1.0 5 P42345,P78527 2
21
+ Dynamin, GTPase region, conserved site [IPR019762] 0.5113839661048935 0.2941637270952327 0.7686327965978239 1.0 1.0 3 O00429 1
22
+ Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628] 0.6650246305418662 0.2369483037152274 0.8126968958662235 1.0 1.0 2 Q6UB35 1
23
+ Bromodomain, conserved site [IPR018359] 0.3209103571868438 0.1947644075652543 0.845577387297026 1.0 1.0 10 O15164 1
24
+ WD40 repeat, conserved site [IPR019775] 0.242827780893379 0.1941061710614066 0.846092749718514 1.0 1.0 48 Q9GZS3,Q9UFC0,P61962,P57737,O43818,Q8WUA4,O75083,Q8NFH3,P53621 9
25
+ Tr-type G domain, conserved site [IPR031157] 0.3575832305795294 0.1796823399666827 0.8574019584518671 1.0 1.0 6 P13639,Q8N442,Q05639,P15170,P49411 5
26
+ Syntaxin/epimorphin, conserved site [IPR006012] 0.3235446982896975 0.1667762498625431 0.8675461068028454 1.0 1.0 8 O14662 1
27
+ Serpin, conserved site [IPR023795] 0.4479911483819121 0.1636973903795506 0.8699693720114321 1.0 1.0 3 P35237 1
28
+ ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847] 0.6092980295566434 0.1454547925742164 0.8843518063793212 1.0 1.0 2 P53597 1
29
+ ATPase, AAA-type, conserved site [IPR003960] 0.2995518320424966 0.1258579972714802 0.8998443315360602 1.0 1.0 17 P62191,Q8NB90,Q15645 3
30
+ Cadherin conserved site [IPR020894] 0.5880541871921108 0.1184319597770033 0.9057254037277966 1.0 1.0 2 P19022 1
31
+ GTP1/OBG, conserved site [IPR006074] 0.5788177339901402 0.1080004661336526 0.9139953224524612 1.0 1.0 2 P55039 1
32
+ Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867] 0.5723522167487608 0.1011611950680868 0.9194225004942844 1.0 1.0 2 P11586 1
33
+ Ribosomal protein L3, conserved site [IPR019926] 0.5357142857142771 0.06921848339137 0.944815710774378 1.0 1.0 2 P39023 1
34
+ Alcohol dehydrogenase, zinc-type, conserved site [IPR002328] 0.5052339901477743 0.0505713738819913 0.9596670739600246 1.0 1.0 2 P11766 1
35
+ Actinin-type actin-binding domain, conserved site [IPR001589] 0.2407408265681592 0.0367126479791372 0.970714123813376 1.0 1.0 14 P21333,Q9UPN3,O15020,O75369,Q03001 5
36
+ Ribosomal protein L30, conserved site [IPR018038] 0.3586822660098429 0.0210050276741157 0.9832416450575948 1.0 1.0 2 P18124 1
37
+ RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719] 0.3552955665024531 0.0208967995809231 0.983327979632194 1.0 1.0 2 O00442 1
interpro_conserved_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Aminotransferase, class IV, conserved site [IPR018300]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "CBX family C-terminal motif [IPR033773]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA methylase, N-6 adenine-specific, conserved site [IPR002052]", "DNA mismatch repair, conserved site [IPR014762]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family A, conserved site [IPR019760]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dpy-30 motif [IPR007858]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Endonuclease III-like, conserved site-2 [IPR004036]", "Endonuclease III-like, iron-sulphur cluster loop motif [IPR003651]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Ependymin, conserved site [IPR018224]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Fork head domain conserved site 2 [IPR030456]", "Fork head domain conserved site1 [IPR018122]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site [IPR017958]", "Glutathione peroxidase conserved site [IPR029760]", "Glycerate/sugar phosphate transporter, conserved site [IPR021159]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 2, conserved site [IPR023230]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Golgin subfamily A member 2, C-terminal binding motif [IPR043937]", "Guanine-nucleotide dissociation stimulator, CDC24, conserved site [IPR001331]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif [IPR000445]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "Homeobox, conserved site [IPR017970]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Integrin alpha chain, C-terminal cytoplasmic region, conserved site [IPR018184]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Lysophospholipase patatin, conserved site [IPR001423]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Methylthiotransferase, conserved site [IPR020612]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "MnmG-related, conserved site [IPR020595]", "MoaA/NifB/PqqE, iron-sulphur binding, conserved site [IPR000385]", "Molybdenum cofactor biosynthesis, conserved site [IPR008284]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NADH:ubiquinone oxidoreductase, subunit 1, conserved site [IPR018086]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase TruD, conserved site [IPR020119]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "RNA polymerase, subunit H/Rpb5, conserved site [IPR020608]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal RNA adenine methylase transferase, conserved site [IPR020596]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S14, conserved site [IPR018271]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "Tyrosine-protein kinase, receptor class V, conserved site [IPR001426]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "ABCB1", "ABCB10", "ABCB7", "ABCB8", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ACAA1", "ACAA2", "ACAD9", "ACADM", "ACADS", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACBD5", "ACIN1", "ACLY", "ACSF3", "ACSL1", "ACSL3", "ACSL4", "ACSL6", "ACTL6A", "ACTN1", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK4", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1A2", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH4A1", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA6", "ANXA7", "AP1M1", "AP1S1", "AP2M1", "AP2S1", "AP3M1", "APEX1", "APP", "ARHGEF7", "ARIH2", "ATAD1", "ATAD2", "ATP5C1", "ATP5O", "BAG6", "BAX", "BAZ1A", "BAZ1B", "BAZ2A", "BCAT2", "BCS1L", "BLM", "BOP1", "BPNT1", "BPTF", "BRD2", "BRD4", "BUD31", "CAD", "CALR", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CASK", "CBR1", "CBX1", "CBX3", "CBX5", "CBX8", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDH2", "CDKAL1", "CDYL", "CETN2", "CHAF1B", "CHD1L", "CHD3", "CHD4", "CLGN", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "CORO1B", "CORO1C", "CORO7", "CPOX", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4B", "CUL5", "CYP51A1", "DBI", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX55", "DDX6", "DHCR7", "DHFR", "DHRS4", "DHRS7", "DHRS7B", "DHX15", "DHX16", "DHX29", "DHX30", "DHX33", "DHX36", "DHX38", "DHX40", "DHX57", "DHX8", "DHX9", "DIDO1", "DIMT1", "DIS3", "DLG1", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC16", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNM3", "DNMBP", "DNMT1", "DPY30", "DRG1", "DRG2", "DSG2", "DST", "DTYMK", "DYNLL1", "DYNLL2", "EARS2", "ECH1", "ECHDC1", "ECHS1", "ECI1", "ECI2", "EED", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A2", "EIF4A3", "EIF4E", "EIF4E2", "ENO1", "EPB41", "EPB41L2", "EPB41L3", "EPB41L5", "EPDR1", "EPHA7", "EPN1", "EPRS", "EPS15", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FOXK1", "FOXO3", "FUCA1", "FUCA2", "GAA", "GALK1", "GANAB", "GART", "GATB", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPA", "GMPPB", "GNPDA1", "GNS", "GOLGA2", "GPHN", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF3C2", "GUF1", "GUSB", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HIBADH", "HLA-A", "HLA-B", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HOXD11", "HSD17B10", "HSD17B12", "HSD17B4", "HSD17B8", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA14", "HSPA1B", "HSPA2", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "IDH3G", "ILVBL", "IMPAD1", "IMPDH2", "INA", "IQGAP1", "IQGAP2", "ITGAV", "IVD", "KDM2A", "KDM5A", "KDSR", "KIF11", "KIF14", "KIF20A", "KIF20B", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF3A", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LAMP2", "LARS", "LARS2", "LBR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LRWD1", "LSS", "MACF1", "MAPK1", "MAPK14", "MAPK3", "MAPK9", "MARS", "MAT2A", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME1", "ME2", "MGST2", "MID1", "MIF", "MOCS1", "MPHOSPH8", "MPI", "MPP1", "MPP2", "MPP5", "MPP6", "MPP7", "MPST", "MRC2", "MRPL13", "MRPL24", "MRPL3", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTF2", "MTHFD1", "MTHFD1L", "MTHFD2", "MTO1", "MTOR", "MVK", "ND1", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFV1", "NEFL", "NEFM", "NES", "NF1", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NSD1", "NSD2", "NSF", "NTHL1", "NUBP2", "NUBPL", "NUDT1", "NUDT12", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL11", "OSBPL8", "OSBPL9", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PAX6", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA6", "PDSS1", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PHF14", "PHF2", "PHF3", "PHGDH", "PHIP", "PI4KA", "PIK3C2A", "PIK3C3", "PIN1", "PLEC", "PLOD1", "PLOD2", "PLOD3", "PLRG1", "PLS1", "PLS3", "PML", "PMS1", "PNP", "PNPLA6", "POLA1", "POLD1", "POLG", "POLR1B", "POLR1C", "POLR2B", "POLR2C", "POLR2E", "PPIB", "PPIC", "PPID", "PPIE", "PPIF", "PPIH", "PPIL1", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS1", "PRPS2", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PUS7", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RARS2", "RCL1", "RDH13", "RDX", "RIDA", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS24", "RPS28", "RPS29", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RRP9", "RSF1", "RSL24D1", "RTCA", "RTN4IP1", "S100A10", "S100A11", "SART1", "SBDS", "SCAF11", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINB1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC27A4", "SLC2A1", "SLC37A4", "SLIT2", "SMARCA4", "SMU1", "SNRNP40", "SNU13", "SORD", "SPATA5", "SPATA5L1", "SPTBN1", "SPTBN2", "SRCAP", "SRM", "STAM", "STMN1", "STOM", "STRN", "STX10", "STX12", "STX16", "STX18", "STX3", "STX5", "STX6", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SV2A", "SYNE2", "TAP1", "TAP2", "TBL3", "TCP1", "THOC6", "TK1", "TLE3", "TLN1", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM21", "TRIM24", "TRIM25", "TRIM28", "TRIM33", "TRIP13", "TRMT11", "TSFM", "TSPAN10", "TSPAN3", "TSPAN6", "TST", "TTF2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXN2", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UBA5", "UHRF1", "USP10", "USP11", "USP14", "USP15", "USP24", "USP28", "USP32", "USP47", "USP48", "USP5", "USP7", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "WARS", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2", "ZMYND8"], "leading_proteins": ["ADH5", "AP1S1", "ARIH2", "CDH2", "COPA", "CORO7", "DCAF7", "DNM1L", "DRG2", "DST", "EEF1A2", "EEF2", "EPN1", "FLNA", "FLNB", "GMPPB", "GSPT1", "GTF3C2", "GUF1", "HLA-B", "HMGB1", "HMGB2", "IDH2", "KIF20B", "KIF22", "KIF2A", "KIF3A", "KIF4A", "KIFC1", "LRWD1", "MACF1", "MAPK1", "MAPK14", "MPP2", "MPP5", "MPP6", "MPP7", "MTHFD1", "MTHFD1L", "MTOR", "NUP43", "PEPD", "PFKL", "PFKM", "PLOD1", "PLOD3", "POLA1", "PRKDC", "PRPS2", "PSMC1", "RPL3", "RPL7", "RRP9", "RTCA", "SERPINB6", "SPATA5", "SPTBN2", "STX16", "SUCLG1", "TRIM21", "TRIM24", "TRIP13", "TST", "TUBB2B", "TUBB4A", "TUBB6", "TUFM", "USP11", "USP32", "WDR1", "WDR61"]}
interpro_domain/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_domain/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Kinesin motor domain [IPR001752]", "1": "B30.2/SPRY domain [IPR001870]", "2": "SPRY domain [IPR003877]", "3": "Zinc finger, RING-type [IPR001841]", "4": "Importin-beta, N-terminal domain [IPR001494]", "5": "Clathrin/coatomer adaptor, adaptin-like, N-terminal [IPR002553]", "6": "TOG domain [IPR034085]", "7": "Sterile alpha motif domain [IPR001660]", "8": "Guanylate kinase/L-type calcium channel beta subunit [IPR008145]", "9": "Guanylate kinase-like domain [IPR008144]", "10": "MPN domain [IPR037518]", "11": "Ubiquitin-associated domain [IPR015940]", "12": "SH3 domain [IPR001452]", "13": "Protein kinase domain [IPR000719]", "14": "Proteasome component (PCI) domain [IPR000717]", "15": "Small GTP-binding protein domain [IPR005225]", "16": "DEAD/DEAH box helicase domain [IPR011545]", "17": "Band 4.1 domain [IPR019749]", "18": "FERM central domain [IPR019748]", "19": "Ubiquitin-like domain [IPR000626]", "20": "Pleckstrin homology domain [IPR001849]", "21": "RNA-binding domain, S1 [IPR022967]", "22": "S1 domain [IPR003029]", "23": "PDZ domain [IPR001478]", "24": "ATPase, AAA-type, core [IPR003959]", "25": "K Homology domain, type 1 [IPR004088]", "26": "K Homology domain [IPR004087]"}
interpro_domain/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: 7b23fb2d17ca9d2ef5d8cd406f941c65c53eaedb37b99241dbf8aae8f3d1628a
  • Pointer size: 131 Bytes
  • Size of remote file: 135 kB
interpro_domain/basic/plot_1.png ADDED

Git LFS Details

  • SHA256: 82459b81227da203748f57a8cf173f602cc8203ee7023e29a0e43265c48a280a
  • Pointer size: 131 Bytes
  • Size of remote file: 134 kB
interpro_domain/basic/plot_10.png ADDED

Git LFS Details

  • SHA256: f8c87db2e18b585c1e9a182f84cc49f3895c35442a90ae1d32287ebc67332d4f
  • Pointer size: 131 Bytes
  • Size of remote file: 134 kB
interpro_domain/basic/plot_11.png ADDED

Git LFS Details

  • SHA256: 6fca8ec72b9ab552340c52f231c582c0ba77c1275f770cc20d71f3a885218172
  • Pointer size: 131 Bytes
  • Size of remote file: 150 kB
interpro_domain/basic/plot_12.png ADDED

Git LFS Details

  • SHA256: 4ca659cfdce5a7f1f58d56958c127f6022aa42552ed698975a8635213463191d
  • Pointer size: 131 Bytes
  • Size of remote file: 146 kB
interpro_domain/basic/plot_13.png ADDED

Git LFS Details

  • SHA256: 4a207f0d318f2588083d7a1b09bc371dc609eb70a7caa071a6d555858ec78605
  • Pointer size: 131 Bytes
  • Size of remote file: 148 kB
interpro_domain/basic/plot_14.png ADDED

Git LFS Details

  • SHA256: 4dffe1068748cebd85d8d78a280ddf404efece848b2a6b5aa45b0d9039604666
  • Pointer size: 131 Bytes
  • Size of remote file: 155 kB
interpro_domain/basic/plot_15.png ADDED

Git LFS Details

  • SHA256: 74d1d4dc59fb726be1bc310afa0d9553c8fe5d0e324924a4b84c9e2ea7694171
  • Pointer size: 131 Bytes
  • Size of remote file: 156 kB
interpro_domain/basic/plot_16.png ADDED

Git LFS Details

  • SHA256: ce833f2f6d4c0311bb23adeeb9957210714f992343d5d7735a1d0396983a8dc4
  • Pointer size: 131 Bytes
  • Size of remote file: 172 kB
interpro_domain/basic/plot_17.png ADDED

Git LFS Details

  • SHA256: c880a7747a861fc2f09557f7e2056c0683953a0b03f84a3b48c68ccb5647cd03
  • Pointer size: 131 Bytes
  • Size of remote file: 145 kB
interpro_domain/basic/plot_18.png ADDED

Git LFS Details

  • SHA256: 69e1e2ad9d65e484d8ac2493d8bb9f1caac255d24b81d07b648029bc9ae3617d
  • Pointer size: 131 Bytes
  • Size of remote file: 148 kB
interpro_domain/basic/plot_19.png ADDED

Git LFS Details

  • SHA256: c0a1eb64b0dc906a1fd12cdef66d72e47af6e34b750cad94a072e8abece6cfc9
  • Pointer size: 131 Bytes
  • Size of remote file: 139 kB
interpro_domain/basic/plot_2.png ADDED

Git LFS Details

  • SHA256: 34ae49e9ad7cc838b8d47b0fd924309161645bc109ae91d5adcd6c3957c1a45d
  • Pointer size: 131 Bytes
  • Size of remote file: 131 kB
interpro_domain/basic/plot_20.png ADDED

Git LFS Details

  • SHA256: 8bc1e6e6c0c0cdd769cfdcd3094ea7f68bc126c28a124490703bddd83238bf29
  • Pointer size: 131 Bytes
  • Size of remote file: 154 kB
interpro_domain/basic/plot_21.png ADDED

Git LFS Details

  • SHA256: 424ec4994f62d1324754b1113b7b61976aa8fcec59f4e4242dc2e85195403071
  • Pointer size: 131 Bytes
  • Size of remote file: 148 kB
interpro_domain/basic/plot_22.png ADDED

Git LFS Details

  • SHA256: 6aebc984527f7e3758b447f31c9a261c6d37ecbdcc60cece016889b0e8bcc425
  • Pointer size: 131 Bytes
  • Size of remote file: 134 kB
interpro_domain/basic/plot_23.png ADDED

Git LFS Details

  • SHA256: afc7ae1bfc2f0b4f232c834c51109daa05f53fb6f299da92307f3f5adb16bffa
  • Pointer size: 131 Bytes
  • Size of remote file: 145 kB
interpro_domain/basic/plot_24.png ADDED

Git LFS Details

  • SHA256: e733e50e34ca3d4f379832ffdc1be8a137dd54609e0cbd43b9bd175b4dc03643
  • Pointer size: 131 Bytes
  • Size of remote file: 153 kB