ligdis commited on
Commit
b6837b7
·
verified ·
1 Parent(s): 0341069

Upload folder using huggingface_hub

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. interpro_active_site/advanced/idx2term.json +1 -0
  2. interpro_active_site/basic/idx2term.json +1 -0
  3. interpro_active_site/consensus.joblib +3 -0
  4. interpro_active_site/df_merge.tsv +1 -0
  5. interpro_active_site/metrics.json +7 -0
  6. interpro_active_site/paths.json +1 -0
  7. interpro_active_site/result.tsv +3 -0
  8. interpro_active_site/selections.json +1 -0
  9. interpro_binding_site/advanced/idx2term.json +1 -0
  10. interpro_binding_site/basic/idx2term.json +1 -0
  11. interpro_binding_site/basic/plot_0.png +3 -0
  12. interpro_binding_site/consensus.joblib +3 -0
  13. interpro_binding_site/df_merge.tsv +1 -0
  14. interpro_binding_site/metrics.json +7 -0
  15. interpro_binding_site/paths.json +1 -0
  16. interpro_binding_site/result.tsv +5 -0
  17. interpro_binding_site/selections.json +1 -0
  18. interpro_conserved_site/advanced/idx2term.json +1 -0
  19. interpro_conserved_site/basic/idx2term.json +1 -0
  20. interpro_conserved_site/basic/plot_0.png +3 -0
  21. interpro_conserved_site/consensus.joblib +3 -0
  22. interpro_conserved_site/df_merge.tsv +2 -0
  23. interpro_conserved_site/metrics.json +7 -0
  24. interpro_conserved_site/paths.json +1 -0
  25. interpro_conserved_site/result.tsv +30 -0
  26. interpro_conserved_site/selections.json +1 -0
  27. interpro_domain/advanced/idx2term.json +1 -0
  28. interpro_domain/advanced/plot_0.png +3 -0
  29. interpro_domain/basic/idx2term.json +1 -0
  30. interpro_domain/basic/plot_0.png +3 -0
  31. interpro_domain/basic/plot_1.png +3 -0
  32. interpro_domain/basic/plot_2.png +3 -0
  33. interpro_domain/basic/plot_3.png +3 -0
  34. interpro_domain/consensus.joblib +3 -0
  35. interpro_domain/df_merge.tsv +4 -0
  36. interpro_domain/metrics.json +7 -0
  37. interpro_domain/paths.json +1 -0
  38. interpro_domain/result.tsv +183 -0
  39. interpro_domain/selections.json +0 -0
  40. interpro_family/advanced/idx2term.json +1 -0
  41. interpro_family/advanced/plot_0.png +3 -0
  42. interpro_family/advanced/plot_1.png +3 -0
  43. interpro_family/basic/idx2term.json +1 -0
  44. interpro_family/basic/plot_0.png +3 -0
  45. interpro_family/basic/plot_1.png +3 -0
  46. interpro_family/basic/plot_2.png +3 -0
  47. interpro_family/basic/plot_3.png +3 -0
  48. interpro_family/basic/plot_4.png +3 -0
  49. interpro_family/consensus.joblib +3 -0
  50. interpro_family/df_merge.tsv +4 -0
interpro_active_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_active_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_active_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:20f2903f83992fe3d3e3484066e1e1b753468b3191a154eaaa4294bbb41de5cc
3
+ size 73676
interpro_active_site/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_active_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3220,
4
+ "annotations_size": 57,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.508771929824561
7
+ }
interpro_active_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C285/C285_val_log2fc"}
interpro_active_site/result.tsv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Ribonucleotide reductase small subunit, acitve site [IPR030475] 0.7750155376009982 0.5829706099812677 0.5599130852980969 1.0 0.938677819470339 2 Q7LG56 1
3
+ ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003] 0.4266169154228768 0.2396866746163855 0.8105731659827391 1.0 1.0 4 P21281,P38606,P06576 3
interpro_active_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["ATP synthase, F0 complex, subunit A, active site [IPR023011]", "ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Coenzyme A transferase active site [IPR004164]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "DNA topoisomerase, type IA, active site [IPR023406]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glutaredoxin active site [IPR011767]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-CoA lyase, active site [IPR000138]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Lipase, GDXG, putative serine active site [IPR033140]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine proteases, trypsin family, histidine active site [IPR018114]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Thymidylate synthase, active site [IPR020940]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]"], "available_proteins": ["ACAA1", "ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "AKT2", "APEH", "ATP5A1", "ATP5B", "ATP6", "ATP6V1A", "ATP6V1B2", "BLMH", "CAMK2G", "CAPN1", "CAPN2", "CDK1", "CDK13", "CDK2", "CDK4", "CDK6", "CHEK2", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "CTSC", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLRX", "GLUD1", "GSK3A", "GSK3B", "GSR", "HADHB", "HMGCL", "HMGCS1", "LDHA", "LDHB", "LONP1", "LYN", "MAP2K1", "MAP2K2", "MAP3K7", "MAPK1", "MAPK3", "MAPKAPK2", "MDH1", "MDH2", "MTMR2", "NCEH1", "NEK9", "NME1", "NME2", "OXCT1", "PAK1", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKMYT1", "PKN1", "PKN2", "PLK1", "PREP", "PRKAA2", "PRKACA", "PRPF4B", "PRSS3", "PTK7", "PTPMT1", "PTPN1", "PTPN11", "PTPN23", "PTPRF", "RIPK1", "RNASET2", "ROCK1", "RPS6KA1", "RPS6KA3", "RRM2", "RRM2B", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SRPK2", "SUCLG1", "TALDO1", "TAOK2", "TIGAR", "TOP1", "TOP3A", "TPI1", "TPP2", "TTK", "TXNRD1", "TYMS", "UBA1", "UBA2", "UBA3", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "ULK3", "UMPS", "VRK1", "VRK2", "WNK1"], "leading_proteins": ["ATP5B", "ATP6V1A", "ATP6V1B2", "RRM2B"]}
interpro_binding_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_binding_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "EF-Hand 1, calcium-binding site [IPR018247]"}
interpro_binding_site/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: cc249aa8f81763b85483e4b3be8efc48ecb9e8c1747f13c198fba6024d35d37a
  • Pointer size: 131 Bytes
  • Size of remote file: 151 kB
interpro_binding_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c03dfe8ae3fb0e0beda22e98fd1efd71a853f04898d66518bcb7264f1e9f2748
3
+ size 73533
interpro_binding_site/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_binding_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3220,
4
+ "annotations_size": 32,
5
+ "title": "Average number of proteins per term",
6
+ "value": 4.5
7
+ }
interpro_binding_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C285/C285_val_log2fc"}
interpro_binding_site/result.tsv ADDED
@@ -0,0 +1,5 @@
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ EF-Hand 1, calcium-binding site [IPR018247] 0.4845505986377939 0.8785120198310312 0.3796659176730999 0.9999997687825704 0.9759747729112904 39 P43304,P04632,O75746,Q6NUK1,Q14257,O75340,Q9NWM8,P41208,P80303,Q02818,Q9UBV8,Q9BPX6,O95202,O95302,Q9Y680 15
3
+ Peptidase M16, zinc-binding site [IPR001431] 0.5605327192275464 0.8261015107437425 0.4087465107665173 0.999999950253912 0.9759747729112904 5 P22695 1
4
+ 2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016] 0.4162262977929859 0.1024860532651403 0.91837088243973 1.0 0.9759747729112904 3 O00330,P36957 2
5
+ Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917] 0.3604723430702418 0.0301157084131263 0.9759747729112904 1.0 0.9759747729112904 2 O15270 1
interpro_binding_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Coenzyme A transferase binding site [IPR004163]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "Inositol monophosphatase, metal-binding site [IPR020583]", "Manganese/iron superoxide dismutase, binding site [IPR019833]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Porphobilinogen deaminase, dipyrromethane cofactor binding site [IPR022419]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]", "Ureohydrolase, manganese-binding site [IPR020855]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "AKT2", "APEX1", "APOBEC3C", "ARG2", "BPNT1", "CALM3", "CALU", "CAMK2G", "CAPN1", "CAPN2", "CAPNS1", "CDK1", "CDK13", "CDK2", "CDK4", "CDK6", "CETN2", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DLAT", "DLST", "EHD1", "EHD4", "EIF2AK2", "EPS15", "EPS15L1", "FKBP10", "FKBP14", "FKBP7", "FKBP9", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3A", "GSK3B", "HK1", "HK2", "HMBS", "IDE", "ILKAP", "IQGAP1", "IQGAP2", "LETM1", "LPCAT2", "LYN", "MACF1", "MAP2K1", "MAP2K2", "MAP3K7", "MAP4K5", "MAPK1", "MAPK14", "MAPK3", "MAPKAPK2", "MCCC1", "METAP2", "MICU1", "MYH10", "MYH9", "MYO19", "MYO1B", "MYO1C", "MYO1D", "NFS1", "NRDC", "NUCB1", "NUCB2", "OXCT1", "OXSR1", "PA2G4", "PAK1", "PAK2", "PC", "PCCA", "PDCD6", "PDHX", "PEF1", "PGD", "PKMYT1", "PKN1", "PKN2", "PLK1", "PLS1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1F", "PPM1G", "PRKAA2", "PRKACA", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "REPS1", "RHOT1", "RHOT2", "ROCK1", "RPS6KA1", "RPS6KA3", "S100A11", "SDF4", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SOD2", "SPTAN1", "SPTLC2", "SRI", "SRPK1", "SRPK2", "STK26", "STK4", "TAOK2", "TKT", "TTK", "TUBB", "TUBB2A", "TUBB2B", "TUBB3", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "ULK3", "UQCRC2", "VRK1"], "leading_proteins": ["CAPNS1", "CETN2", "DLST", "FKBP14", "FKBP7", "FKBP9", "GPD2", "LETM1", "MICU1", "NUCB1", "NUCB2", "PDCD6", "PDHX", "PEF1", "RCN2", "SLC25A12", "SLC25A24", "SPTLC2", "UQCRC2"]}
interpro_conserved_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_conserved_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Acyl-CoA dehydrogenase, conserved site [IPR006089]"}
interpro_conserved_site/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: d2cdcc31e9346d17c1d0294d85847994e866a4f715afe3ac56974f42481db8c5
  • Pointer size: 131 Bytes
  • Size of remote file: 145 kB
interpro_conserved_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ade9ebdb606692a766816f51d6371ace95f586a8684721a2c67bd575df329cd7
3
+ size 81506
interpro_conserved_site/df_merge.tsv ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
2
+ Syntaxin/epimorphin, conserved site [IPR006012] 4 8 2.4096134127185387 0.0159694318236072 2.592233009708738 5.847087378640777 0.9961908981999794 0.2839139128702306 1.4759357288864456 1.4239341993278547 1.138258151200134 0.2914162845337057 0.0003595516111798 0.0607401038440192 0.1169218221283287 0.0033170374819039 0.0002457979454447
interpro_conserved_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3220,
4
+ "annotations_size": 273,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.58974358974359
7
+ }
interpro_conserved_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C285/C285_val_log2fc"}
interpro_conserved_site/result.tsv ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Syntaxin/epimorphin, conserved site [IPR006012] 0.8094956902381828 2.4096134127185387 0.0159694318236072 0.9876591526206678 0.4228946959866707 8 P56962,O43752,O60499,Q9P2W9 4
3
+ Tetraspanin, conserved site [IPR018503] 0.8750388560770823 1.523842796186259 0.1275479860107267 1.0 0.6900272423660049 3 O60637,Q9H1Z9 2
4
+ Thioredoxin, conserved site [IPR017937] 0.5460261683852246 1.3536762355446368 0.1758396930794212 1.0 0.7327719624277406 12 Q9H3N1,Q9H1E5 2
5
+ Haem oxygenase conserved site [IPR018207] 0.9524549409571108 1.1920667534519118 0.2332350718895794 1.0 0.7360281676176113 2 P30519 1
6
+ AMP-binding, conserved site [IPR020845] 0.5742018971774632 1.1447779132620508 0.2523011668270909 1.0 0.7360281676176113 7 Q9UKU0,P33121,O14975 3
7
+ Intermediate filament protein, conserved site [IPR018039] 0.5511297424341083 1.1363083579105282 0.2558275340822726 1.0 0.7360281676176113 8 P08670,Q16352,P07196 3
8
+ Short-chain dehydrogenase/reductase, conserved site [IPR020904] 0.5204547808315749 1.1355928132252748 0.2561270180354325 1.0 0.7360281676176113 11 Q06136,Q8NBN7,Q53GQ0 3
9
+ Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728] 0.89030453697949 0.9684861857867796 0.3328016148393993 1.0 0.8108341867162396 2 Q07820 1
10
+ Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717] 0.89030453697949 0.9684861857867796 0.3328016148393993 1.0 0.8108341867162396 2 Q07820 1
11
+ Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726] 0.89030453697949 0.9684861857867796 0.3328016148393993 1.0 0.8108341867162396 2 Q07820 1
12
+ HMG box A DNA-binding domain, conserved site [IPR017967] 0.721479639415608 0.9476175677419588 0.3433241794203612 1.0 0.8108341867162396 3 P09429,P26583 2
13
+ Acyl-CoA-binding protein, ACBP, conserved site [IPR022408] 0.7125103291175612 0.9147105490722178 0.3603436048689501 1.0 0.8108341867162396 3 Q9H3P7 1
14
+ Chromo domain, conserved site [IPR023779] 0.6948039950851397 0.8503103885261117 0.3951525423721276 1.0 0.8488071925294214 3 P83916 1
15
+ Proteasome beta-type subunit, conserved site [IPR016050] 0.4602221710079121 0.6672613565615539 0.5046052054211141 1.0 0.9434061595752862 8 P49721,P28072 2
16
+ Polyprenyl synthetase, conserved site [IPR033749] 0.8008079552516942 0.6642583502384684 0.506524973221715 1.0 0.9434061595752862 2 P14324 1
17
+ Macrophage migration inhibitory factor, conserved site [IPR019829] 0.7886886264760531 0.6256120858338152 0.5315694095933097 1.0 0.9434061595752862 2 P14174 1
18
+ Dynamin, GTPase region, conserved site [IPR019762] 0.6147183198126143 0.5730420697870556 0.5666162094254374 1.0 0.9434061595752862 3 P50570 1
19
+ 14-3-3 protein, conserved site [IPR023409] 0.4634241740675292 0.538600337644501 0.5901626545395557 1.0 0.9434061595752862 6 P31946,P27348,P63104,P62258 4
20
+ Mrp, conserved site [IPR000808] 0.756059664387823 0.5257088251420354 0.5990905311385071 1.0 0.9434061595752862 2 Q9Y5Y2 1
21
+ UbiE/COQ5 methyltransferase, conserved site [IPR023576] 0.7489123679303964 0.5047249936316519 0.6137520038913884 1.0 0.9434061595752862 2 Q5HYK3 1
22
+ Acyl-CoA dehydrogenase, conserved site [IPR006089] 0.3618543870566297 0.1533639615848168 0.8781112631235155 1.0 1.0 6 Q9H845,P49748,P45954,P11310,Q92947 5
23
+ Actin, conserved site [IPR004001] 0.5820385332504779 0.1414374144919762 0.8875243988504806 1.0 1.0 2 O96019 1
24
+ Heat shock protein Hsp90, conserved site [IPR019805] 0.4258626049114129 0.1151143950594511 0.9083544501477968 1.0 1.0 3 P14625,P07900 2
25
+ Histidine triad, conserved site [IPR019808] 0.5027967681790045 0.0657285662414003 0.9475939290122036 1.0 1.0 2 Q9BX68 1
26
+ Fructose-bisphosphate aldolase class-I active site [IPR029768] 0.4894344313238178 0.0582146547033609 0.9535776477537314 1.0 1.0 2 P04075 1
27
+ Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770] 0.4776258545680707 0.0525913659181301 0.9580574964509556 1.0 1.0 2 P06730 1
28
+ Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326] 0.405531385954025 0.0337529458690689 0.9730741583016512 1.0 1.0 2 P24534 1
29
+ Procollagen-lysine 5-dioxygenase, conserved site [IPR001006] 0.3396519577377416 0.0293982417268597 0.9765469750986966 1.0 1.0 2 O60568 1
30
+ Oxysterol-binding protein, conserved site [IPR018494] 0.3103233830845713 0.0266657499054591 0.9787263310284504 1.0 1.0 4 Q96SU4,P22059,Q9BZF1 3
interpro_conserved_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Aldose 1-epimerase, conserved site [IPR018052]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Aminotransferase, class IV, conserved site [IPR018300]", "Amyloidogenic glycoprotein, copper-binding domain conserved site [IPR019744]", "Amyloidogenic glycoprotein, intracellular domain, conserved site [IPR019745]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "ArgE/DapE/ACY1/CPG2/YscS, conserved site [IPR001261]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bax inhibitor 1, conserved site [IPR006213]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA methylase, N-6 adenine-specific, conserved site [IPR002052]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 14-18kDa subunit, conserved site [IPR020708]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Di-trans-poly-cis-decaprenylcistransferase-like, conserved site [IPR018520]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dpy-30 motif [IPR007858]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Endonuclease III-like, conserved site-2 [IPR004036]", "Endonuclease III-like, iron-sulphur cluster loop motif [IPR003651]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "Eukaryotic translation initiation factor 4E (eIF-4E), conserved site [IPR019770]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site [IPR017958]", "Glutathione peroxidase conserved site [IPR029760]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Golgin subfamily A member 2, C-terminal binding motif [IPR043937]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Helix-hairpin-helix motif [IPR000445]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Histidine triad, conserved site [IPR019808]", "Histone H2A conserved site [IPR032458]", "Histone H4, conserved site [IPR019809]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Inositol monophosphatase, conserved site [IPR020550]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Lysophospholipase patatin, conserved site [IPR001423]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Methylthiotransferase, conserved site [IPR020612]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Molybdenum cofactor biosynthesis, conserved site [IPR008284]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NADH:ubiquinone oxidoreductase, subunit 1, conserved site [IPR018086]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M22, conserved site [IPR017860]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site [IPR023058]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I2, Kunitz, conserved site [IPR020901]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Pseudouridine synthase TruD, conserved site [IPR020119]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RIO kinase, conserved site [IPR018935]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "RNA polymerase, subunit H/Rpb5, conserved site [IPR020608]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal RNA adenine methylase transferase, conserved site [IPR020596]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19 conserved site [IPR020934]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S21e, conserved site [IPR018279]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "RidA, conserved site [IPR019897]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinate dehydrogenase, cytochrome b subunit, conserved site [IPR018495]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thiosulphate sulfurtransferase, conserved site [IPR001307]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Transcription factor TFIIB, conserved site [IPR023486]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "AAMP", "ABCB1", "ABCB10", "ABCB7", "ABCD1", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ACAA1", "ACAA2", "ACAD9", "ACADM", "ACADSB", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACBD5", "ACIN1", "ACLY", "ACSF3", "ACSL1", "ACSL3", "ACSL4", "ACSL6", "ACTL6A", "ACTN1", "ACTN2", "ACTN4", "ACTR1A", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK1", "AK2", "AK3", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH4A1", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA6", "ANXA7", "AP1M1", "AP1S1", "AP2M1", "AP2S1", "AP3M1", "APEX1", "APP", "ATAD1", "ATAD2", "ATP5C1", "ATP5O", "BAG6", "BAX", "BAZ1A", "BAZ1B", "BCAT2", "BCS1L", "BOP1", "BPNT1", "BRD2", "BRD4", "BUD31", "CAD", "CALR", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CASK", "CBL", "CBR1", "CBX1", "CBX3", "CBX5", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDH2", "CDK5RAP1", "CDKAL1", "CETN2", "CHAF1B", "CHD1L", "CHD4", "CLGN", "CMPK1", "CNDP2", "COLEC12", "COPA", "COPZ1", "COQ5", "CORO1B", "CORO1C", "CPOX", "CSTB", "CSTF1", "CTBP1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4A", "CUL4B", "CUL5", "CYP51A1", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDT", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX55", "DDX6", "DHCR7", "DHDDS", "DHFR", "DHRS7", "DHRS7B", "DHX15", "DHX16", "DHX29", "DHX30", "DHX33", "DHX36", "DHX38", "DHX40", "DHX57", "DHX8", "DHX9", "DIDO1", "DIS3", "DNAJA1", "DNAJA2", "DNAJA3", "DNAJB1", "DNAJB11", "DNAJB12", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC2", "DNAJC9", "DNM1L", "DNM2", "DNM3", "DNMT1", "DPY30", "DRG1", "DRG2", "DSG2", "DTYMK", "DYNLL2", "EARS2", "ECH1", "ECHDC1", "ECHS1", "ECI1", "ECI2", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A3", "EIF4E", "EIF4E2", "ENO1", "EPB41", "EPB41L2", "EPB41L3", "EPB41L5", "EPN1", "EPRS", "EPS15", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FARP2", "FBL", "FDFT1", "FDPS", "FEN1", "FH", "FLNA", "FLNB", "FLNC", "FUCA1", "FUCA2", "GAA", "GALK1", "GALM", "GANAB", "GART", "GATB", "GCDH", "GEMIN5", "GFM1", "GGPS1", "GLA", "GLB1", "GLO1", "GNPDA1", "GNS", "GOLGA2", "GPHN", "GPI", "GPX8", "GRHPR", "GRWD1", "GSPT1", "GTF2B", "GTF3C2", "GUF1", "H2AFX", "H4C1*", "HADH", "HADHA", "HADHB", "HGS", "HIBADH", "HINT2", "HLA-A", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA14", "HSPA1B", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "IDH3G", "ILVBL", "IMPAD1", "IMPDH2", "INA", "IQGAP1", "IQGAP2", "IVD", "KDM2A", "KDSR", "KIF11", "KIF14", "KIF1A", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF3A", "KIF4A", "KIF5B", "KIFC1", "LAMP1", "LAMP2", "LARS", "LARS2", "LBR", "LIG1", "LIG3", "LMNA", "LMNB1", "LMNB2", "LRWD1", "LSS", "MACF1", "MAPK1", "MAPK14", "MAPK3", "MARS", "MAT2A", "MCL1", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME2", "MGST2", "MID1", "MIF", "MPI", "MPP1", "MPP2", "MPP5", "MPP6", "MPP7", "MPST", "MRPL13", "MRPL24", "MRPL3", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTHFD2", "MTOR", "MVK", "ND1", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFV1", "NEFL", "NEFM", "NES", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NSD2", "NSF", "NTHL1", "NUBP2", "NUBPL", "NUDT1", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL11", "OSBPL8", "OSBPL9", "OSGEP", "P4HB", "PAFAH1B1", "PAICS", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PGM3", "PHF3", "PHF8", "PHGDH", "PHIP", "PI4KA", "PIK3C2A", "PIN1", "PLEC", "PLOD1", "PLOD3", "PLRG1", "PLS1", "PLS3", "PNP", "PNPLA6", "POLA1", "POLD1", "POLR1B", "POLR1C", "POLR2B", "POLR2E", "POLR2F", "PPIB", "PPID", "PPIF", "PPIH", "PPIL1", "PPIL3", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS1", "PRPS2", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PUS7", "PWP1", "PWP2", "PYGB", "PYGL", "QARS", "QDPR", "RACK1", "RAE1", "RANBP2", "RARS", "RBBP7", "RCL1", "RDH13", "RDX", "RIDA", "RING1", "RIOK1", "RIOK2", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS15", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS21", "RPS24", "RPS28", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RRP9", "RSF1", "RSL24D1", "RTCA", "RTN4IP1", "S100A10", "S100A11", "SART1", "SBDS", "SCD", "SCP2", "SDHB", "SDHC", "SEC11A", "SEC61A1", "SERPINB6", "SERPINH1", "SLC1A5", "SLC27A2", "SLC27A4", "SLC2A1", "SLIT2", "SMARCA4", "SMS", "SMU1", "SNRNP40", "SNU13", "SPATA5", "SPATA5L1", "SPTBN1", "SRCAP", "SRM", "STAM", "STMN1", "STOM", "STRN", "STX10", "STX12", "STX17", "STX18", "STX4", "STX5", "STX6", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SYNE2", "TAP1", "TAP2", "TBL3", "TCP1", "TFB1M", "THOC6", "TK1", "TLE3", "TLN1", "TMBIM6", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM13", "TRIM21", "TRIM25", "TRIM28", "TRIP13", "TRMT11", "TSFM", "TSPAN10", "TSPAN3", "TSPAN6", "TST", "TUBB", "TUBB2A", "TUBB2B", "TUBB3", "TUBB4A", "TUBB4B", "TUBB6", "TUBG1", "TUFM", "TXN2", "TXNDC12", "TXNDC5", "TXNL1", "UBA1", "UBA2", "UHRF1", "USP10", "USP11", "USP14", "USP33", "USP47", "USP48", "USP5", "USP7", "USP8", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "VPS4A", "VPS4B", "WARS", "WDHD1", "WDR1", "WDR12", "WDR18", "WDR3", "WDR36", "WDR41", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2", "ZMYND8"], "leading_proteins": ["ACAD9", "ACADM", "ACADSB", "ACADVL", "ACBD3", "ACSL1", "ACSL6", "ACTL6A", "ALDOA", "CBX1", "COQ5", "DNM2", "EEF1B2", "EIF4E", "FDPS", "GCDH", "HINT2", "HMGB1", "HMGB2", "HMOX2", "HSD17B12", "HSP90AA1", "HSP90B1", "INA", "KDSR", "MCL1", "MIF", "NEFL", "NUBP2", "OSBP", "OSBPL8", "OSBPL9", "PLOD3", "PSMB2", "PSMB6", "RDH13", "SLC27A2", "STX10", "STX17", "STX18", "STX6", "TMX1", "TMX4", "TSPAN10", "TSPAN3", "VIM", "YWHAB", "YWHAE", "YWHAQ", "YWHAZ"]}
interpro_domain/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Phospholipid/glycerol acyltransferase [IPR002123]"}
interpro_domain/advanced/plot_0.png ADDED

Git LFS Details

  • SHA256: d95c38ad22b10b0c36889584af69fa30e0b2526893554ae80cde25bf1aafa785
  • Pointer size: 131 Bytes
  • Size of remote file: 189 kB
interpro_domain/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Phospholipid/glycerol acyltransferase [IPR002123]", "1": "EF-hand domain [IPR002048]", "2": "Acyl-CoA dehydrogenase/oxidase, N-terminal [IPR013786]", "3": "Acyl-CoA dehydrogenase/oxidase C-terminal [IPR009075]"}
interpro_domain/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: 7ba5286edab9d2141980e15dd51230d5961b4507e6bb8c42e08dd8b638656370
  • Pointer size: 131 Bytes
  • Size of remote file: 141 kB
interpro_domain/basic/plot_1.png ADDED

Git LFS Details

  • SHA256: df454b16887237b0bbd2c766014db0569ac7a214850b584237abef1c9037fde0
  • Pointer size: 131 Bytes
  • Size of remote file: 144 kB
interpro_domain/basic/plot_2.png ADDED

Git LFS Details

  • SHA256: f2bfaedd6e2b876b4e447fcbff6921414cc83b5c182fa1ab048a89e8d7b77614
  • Pointer size: 131 Bytes
  • Size of remote file: 146 kB
interpro_domain/basic/plot_3.png ADDED

Git LFS Details

  • SHA256: fe0064c55eec0f6be2369ae79a7c4538664571544a23f5f7946a6535bf5b45a9
  • Pointer size: 131 Bytes
  • Size of remote file: 147 kB
interpro_domain/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6d8cf504ca0dd065553b90a05f521ca2a77747c7dcff00fd027f03fe6976402b
3
+ size 169425
interpro_domain/df_merge.tsv ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
2
+ Cytochrome b5-like heme/steroid binding domain [IPR001199] 2 6 2.3591367267694627 0.01831750543683 2.813106796116505 6.104368932038835 1.6405397264547834 0.1100883340733615 1.2852875686886795 0.8042848477475721 1.100790504333474 0.1612592696854457 0.004020358667343 0.0014481500629001 0.0001725606130307 0.0025975272437437 0.018020673376298
3
+ LEM domain [IPR003887] 3 6 2.1508010428330757 0.0314919067657419 2.237864077669903 5.759708737864078 0.8787481060627674 0.3228260833428172 1.2758866328838632 0.4653299410110203 1.033781091163317 0.2887768895441466 0.0109888575374462 1.0 0.0557540441617295 0.0081566962170519 7.614857799780336e-05
4
+ Phospholipid/glycerol acyltransferase [IPR002123] 5 7 1.977422366896328 0.0479939077903295 2.4611650485436893 6.109223300970874 0.4541526786138767 0.3733328307275969 1.647577392422315 1.6678607828333205 1.200305691546449 0.3080828121567173 0.0731095547591058 1.0 1.0 0.3236592382947187 6.703246650942136e-05
interpro_domain/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 3220,
4
+ "annotations_size": 2549,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.1439780306002354
7
+ }
interpro_domain/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C285/C285_val_log2fc"}
interpro_domain/result.tsv ADDED
@@ -0,0 +1,183 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.8642841648481028 2.3591367267694627 0.01831750543683 1.0 0.4844938791515771 6 O43169,O15173 2
3
+ Reticulon [IPR003388] 0.9651741293532332 2.3260269820470967 0.0200171113038591 1.0 0.4844938791515771 4 O75298,Q16799,O95197 3
4
+ LEM domain [IPR003887] 0.8158957629807612 2.1508010428330753 0.0314919067657419 1.0 0.4844938791515771 6 Q86XL3,P42167,P50402 3
5
+ Phospholipid/glycerol acyltransferase [IPR002123] 0.7472649630641758 1.9774223668963276 0.0479939077903295 1.0 0.4844938791515771 7 O15228,Q8NF37,Q92604,O15120,Q9NUQ2 5
6
+ Target SNARE coiled-coil homology domain [IPR000727] 0.6805629962390103 1.9355559265264035 0.0529221127404033 1.0 0.4870209899445079 10 P56962,O43752,O60499 3
7
+ GOLD domain [IPR009038] 0.7529775054168742 1.872457004559112 0.0611434049050763 1.0 0.4870209899445079 6 Q9H3P7,Q9Y3A6,Q9Y3B3,P49755 4
8
+ P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.7897356143079153 1.8255432612706497 0.0679190890523022 1.0 0.4870209899445079 5 P05023,Q9HD20,P98194,P16615 4
9
+ TRAM/LAG1/CLN8 homology domain [IPR006634] 0.8029036896873404 1.6837499240144542 0.0922300085753624 1.0 0.5095764500647257 4 Q15629,Q96G23 2
10
+ Peptidase M1, membrane alanine aminopeptidase [IPR014782] 0.708235709264626 1.6696512978241425 0.0949883747500537 1.0 0.5189449718891452 6 P55786,P09960,Q9UIQ6,Q9NZ08 4
11
+ Aminopeptidase N-like , N-terminal domain [IPR045357] 0.708235709264626 1.6696512978241425 0.0949883747500537 1.0 0.5189449718891452 6 P55786,P09960,Q9UIQ6,Q9NZ08 4
12
+ Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.7894900497512412 1.629035002828113 0.1033056092609814 1.0 0.5304406209706813 4 P05023,P16615,P98194 3
13
+ Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.7894900497512412 1.629035002828113 0.1033056092609814 1.0 0.5304406209706813 4 P05023,P16615,P98194 3
14
+ Endoplasmic reticulum vesicle transporter, C-terminal [IPR012936] 0.8958657133975695 1.6021181673767824 0.1091294813217211 1.0 0.5318758085833026 3 Q9Y282,Q96RQ1 2
15
+ Endoplasmic reticulum vesicle transporter, N-terminal [IPR039542] 0.8958657133975695 1.6021181673767824 0.1091294813217211 1.0 0.5318758085833026 3 Q9Y282,Q96RQ1 2
16
+ Tim10-like [IPR004217] 0.8930680758470476 1.5916176657575851 0.111470638261808 1.0 0.5380629836525301 3 P62072,Q9Y5J9 2
17
+ Zinc finger, CHHC-type [IPR012996] 0.8542119987565997 1.4453703233467503 0.1483538945588722 1.0 0.5774599819132913 3 P55795,P31943 2
18
+ Glycosyltransferase 2-like [IPR001173] 0.6578702289699422 1.4371503522303992 0.1506752765512453 1.0 0.5774599819132913 6 Q8N4A0 1
19
+ Intermediate filament head, DNA-binding domain [IPR006821] 0.739427860696514 1.4232775401579751 0.1546557151897976 1.0 0.5787496905035708 4 P08670,Q16352,P07196 3
20
+ N-acetylgalactosaminyltransferase [IPR045885] 0.7327973111326196 1.3958833922976408 0.1627496125718757 1.0 0.5863515084811461 4 Q8N4A0 1
21
+ FAD-binding domain, ferredoxin reductase-type [IPR017927] 0.8359816985404652 1.376584368656415 0.1686407864038526 1.0 0.5863515084811461 3 P16435 1
22
+ Oxidoreductase FAD/NAD(P)-binding [IPR001433] 0.8359816985404652 1.376584368656415 0.1686407864038526 1.0 0.5863515084811461 3 P16435 1
23
+ Flavoprotein pyridine nucleotide cytochrome reductase [IPR001709] 0.8359816985404652 1.376584368656415 0.1686407864038526 1.0 0.5863515084811461 3 P16435 1
24
+ ERAP1-like C-terminal domain [IPR024571] 0.7245024875621849 1.3615816351345642 0.1733299542435964 1.0 0.5938414695792034 4 P55786,Q9UIQ6,Q9NZ08 3
25
+ Metaxin, glutathione S-transferase domain [IPR033468] 0.8209147730112879 1.3197142268715292 0.186930448224988 1.0 0.6180100032756091 3 Q13505 1
26
+ Mitochondrial outer membrane transport complex Sam37/metaxin, N-terminal domain [IPR019564] 0.8209147730112879 1.3197142268715292 0.186930448224988 1.0 0.6180100032756091 3 Q13505 1
27
+ FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 0.5376443617109988 1.233125072251873 0.2175291045750942 1.0 0.6444996228849778 11 P62942,Q9NWM8,Q14318,O95302 4
28
+ FAD dependent oxidoreductase [IPR006076] 0.689259154421749 1.2156317617810235 0.2241252292496183 1.0 0.6462615490466934 4 Q9H9P8,Q96CU9 2
29
+ Ricin B, lectin domain [IPR000772] 0.6438955801398654 1.1908185734267134 0.2337248158153064 1.0 0.6604928553361598 5 Q8N4A0 1
30
+ SUN domain [IPR012919] 0.780505646027714 1.1674548407184773 0.2430267352914397 1.0 0.6690051135226053 3 Q9UH99 1
31
+ Ovarian carcinoma immunoreactive antigen domain [IPR009764] 0.9440646364201356 1.1615411128421067 0.2454219139010796 1.0 0.670290054760165 2 Q9NX40 1
32
+ Proteasome activator PA28, N-terminal domain [IPR003185] 0.7771747989026805 1.1549429838178866 0.2481137757013598 1.0 0.670290054760165 3 P61289 1
33
+ Proteasome activator PA28, C-terminal domain [IPR003186] 0.7771747989026805 1.1549429838178866 0.2481137757013598 1.0 0.670290054760165 3 P61289 1
34
+ AMP-dependent synthetase/ligase [IPR000873] 0.5742018971774632 1.1447779132620508 0.2523011668270909 1.0 0.6752549295607448 7 Q9UKU0,P33121,O14975 3
35
+ Intermediate filament, rod domain [IPR039008] 0.5511297424341083 1.1363083579105282 0.2558275340822726 1.0 0.6792754003913677 8 P08670,Q16352,P07196 3
36
+ Dynamin, GTPase domain [IPR001401] 0.6672605592482668 1.1245958921084214 0.2607603152492013 1.0 0.6816524252113252 4 P50570 1
37
+ Peptidase M3A/M3B catalytic domain [IPR001567] 0.7681069319241456 1.12092744065818 0.2623187493546599 1.0 0.6816524252113252 3 Q99797,P52888 2
38
+ Choline/carnitine acyltransferase domain [IPR039551] 0.9325668116842764 1.1198529089723734 0.2627764483681334 1.0 0.6816524252113252 2 P23786 1
39
+ Acyl-CoA oxidase/dehydrogenase, central domain [IPR006091] 0.5334448134243225 1.0922200909338595 0.2747363737258605 1.0 0.68792044855326 9 O15254,Q15067 2
40
+ Syntaxin 6, N-terminal [IPR015260] 0.9216904909881856 1.080592868270698 0.2798782563074069 1.0 0.6901968774159939 2 O60499 1
41
+ Prenylcysteine lyase [IPR010795] 0.9207582349285272 1.0772364305567503 0.2813746537603734 1.0 0.6929700410001853 2 Q9UHG3 1
42
+ AMP-binding enzyme, C-terminal domain [IPR025110] 0.6159631487298035 1.0677974218389747 0.2856119012976863 1.0 0.6969455694681498 5 Q9UKU0,P33121,O14975 3
43
+ Acyltransferase, C-terminal domain [IPR032098] 0.8940335612181385 0.9816994825641204 0.3262479204076576 1.0 0.7346342306706 2 Q9NUQ2 1
44
+ Potentiating neddylation domain [IPR005176] 0.7280562812106808 0.9718517863039918 0.3311242884416328 1.0 0.738483063246196 3 Q92564 1
45
+ ATPase family AAA domain-containing protein 3, N-terminal [IPR021911] 0.8899937849596034 0.9673865213207548 0.3333508455731535 1.0 0.738483063246196 2 Q9NVI7 1
46
+ SUN coiled coil domain 2 [IPR040994] 0.8865755127408339 0.9553052456426028 0.3394233555318098 1.0 0.7426524748932044 2 Q9UH99 1
47
+ EF-hand domain [IPR002048] 0.5105440952272072 0.9497582053589244 0.3422351269643884 1.0 0.7476899754454965 47 Q8NF37,P80303,O95302,Q9Y680,Q6NUK1,Q14257,Q8IYU8,P60660,P43304,P04632,O75746,P41208,Q02818,Q9UBV8,Q9BPX6,O75340,Q9NWM8,P14649,O95202 19
48
+ Acyl-CoA-binding protein, ACBP [IPR000582] 0.7125103291175612 0.9147105490722178 0.3603436048689501 1.0 0.7544699836895389 3 Q9H3P7 1
49
+ 1-acyl-sn-glycerol-3-phosphate acyltransferase [IPR004552] 0.8638906152890001 0.8758922534442228 0.3810886112154179 1.0 0.7736872183491225 2 O15120 1
50
+ Armadillo repeat-containing domain [IPR006911] 0.8570540708514609 0.852248146187821 0.3940763794457367 1.0 0.7838473389156057 2 Q8N2F6 1
51
+ Chromo domain subgroup [IPR017984] 0.6948039950851397 0.8503103885261117 0.3951525423721276 1.0 0.7838473389156057 3 P83916 1
52
+ Chromo shadow domain [IPR008251] 0.6948039950851397 0.8503103885261117 0.3951525423721276 1.0 0.7838473389156057 3 P83916 1
53
+ Thioredoxin domain [IPR013766] 0.4519604533594181 0.8473365105455443 0.3968075816453469 1.0 0.7853708515228959 26 Q9H3N1,Q96JJ7,Q9Y320,Q9H1E5 4
54
+ Phospholipase D/Transphosphatidylase [IPR001736] 0.8486637663144632 0.8234350281200885 0.4102606504893953 1.0 0.7976768864206474 2 Q8N2A8 1
55
+ LEM-like domain [IPR013146] 0.8455562461155823 0.8128238628226366 0.4163190519382025 1.0 0.8033287383728072 2 P42167 1
56
+ Glutathione S-transferase, N-terminal [IPR004045] 0.4883228147113748 0.810834941830103 0.4174604654064335 1.0 0.804093868236525 8 P28161,Q9H7Z7 2
57
+ EB1, C-terminal [IPR004953] 0.8399627097576144 0.793810068343656 0.4273060103655148 1.0 0.8126293219933781 2 Q15555 1
58
+ Tim44-like domain [IPR007379] 0.8387197016780628 0.7896002730630848 0.4297612487365561 1.0 0.8131090566947905 2 Q9BRJ2 1
59
+ Acyl-CoA oxidase, C-terminal [IPR002655] 0.8328154133001716 0.7696834224660476 0.4414877060446043 1.0 0.8242746585509539 2 O15254 1
60
+ Patatin-like phospholipase domain [IPR002641] 0.6681847440970501 0.7552221182328099 0.4501157195541123 1.0 0.829071644989028 3 Q96AD5 1
61
+ Dynamin, N-terminal [IPR045063] 0.4688815233077528 0.7112269438615054 0.4769436145492354 1.0 0.8477888936443522 8 P50570,Q8IWA4 2
62
+ Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.4688815233077528 0.7112269438615054 0.4769436145492354 1.0 0.8477888936443522 8 P50570,Q8IWA4 2
63
+ DDHD domain [IPR004177] 0.8147917961466771 0.7097561284134031 0.477855379059066 1.0 0.8488176733251285 2 O94830 1
64
+ GYF domain [IPR003169] 0.8091982597886782 0.6914461729628857 0.4892851961415174 1.0 0.8602156455028097 2 O95400 1
65
+ Major sperm protein (MSP) domain [IPR000535] 0.6369288156667725 0.6470251699275295 0.5176156535651386 1.0 0.8761452932046314 3 O95292,Q9P0L0 2
66
+ Peptidase M16, N-terminal [IPR011765] 0.4630388114877765 0.6030939829392431 0.546446169050598 1.0 0.8892352046680174 7 P22695 1
67
+ Peptidase M16, C-terminal [IPR007863] 0.4630388114877765 0.6030939829392431 0.546446169050598 1.0 0.8892352046680174 7 P22695 1
68
+ Prolyl 4-hydroxylase alpha-subunit, N-terminal [IPR013547] 0.7787445618396409 0.5944941925403695 0.5521816254091954 1.0 0.8920062593006965 2 P13674 1
69
+ FAD-binding domain, PCMH-type [IPR016166] 0.7784338098197675 0.5935307922784439 0.5528259819243138 1.0 0.8920062593006965 2 Q15392 1
70
+ FAD linked oxidase, N-terminal [IPR006094] 0.7784338098197675 0.5935307922784439 0.5528259819243138 1.0 0.8920062593006965 2 Q15392 1
71
+ U2A'/phosphoprotein 32 family A, C-terminal [IPR003603] 0.7771908017401925 0.5896828044045999 0.5554033257042237 1.0 0.8920062593006965 2 P09661 1
72
+ Dynamin GTPase effector [IPR003130] 0.6147183198126143 0.5730420697870556 0.5666162094254374 1.0 0.8976412167964203 3 P50570 1
73
+ GTPase effector domain [IPR020850] 0.6147183198126143 0.5730420697870556 0.5666162094254374 1.0 0.8976412167964203 3 P50570 1
74
+ Dynamin stalk domain [IPR000375] 0.6147183198126143 0.5730420697870556 0.5666162094254374 1.0 0.8976412167964203 3 P50570 1
75
+ 14-3-3 domain [IPR023410] 0.4634241740675292 0.538600337644501 0.5901626545395557 1.0 0.9067658869326868 6 P31946,P27348,P63104,P62258 4
76
+ RAD23A/RAD23B, UBA1 domain [IPR041811] 0.7495338719701468 0.5065358214628721 0.6124805492942 1.0 0.9165629310152716 2 P54725 1
77
+ XPC-binding domain [IPR015360] 0.7495338719701468 0.5065358214628721 0.6124805492942 1.0 0.9165629310152716 2 P54725 1
78
+ Tudor domain [IPR002999] 0.4276136600328912 0.5050653143911865 0.6135129622738429 1.0 0.9165629310152716 8 Q9Y2W6 1
79
+ NOPS [IPR012975] 0.593410009325457 0.5048454433359757 0.6136673952113056 1.0 0.9165629310152716 3 P23246,Q8WXF1 2
80
+ Heat shock chaperonin-binding [IPR006636] 0.4803165795791674 0.4947515087827757 0.6207755373588988 1.0 0.9167768509431246 5 Q9UHD9,P54725 2
81
+ BAR domain [IPR004148] 0.5042950474085242 0.4839206096945087 0.6284422131418739 1.0 0.9221731950727138 4 Q9Y371 1
82
+ ABC transporter type 1, transmembrane domain [IPR011527] 0.4358487808969706 0.4776589572357995 0.6328929608425671 1.0 0.9223808788951992 7 Q03518,P33897 2
83
+ p21 activated kinase binding domain [IPR033923] 0.7302672467370803 0.4516869502502125 0.6514945206311888 1.0 0.9324309562542956 2 Q13153 1
84
+ CRIB domain [IPR000095] 0.7302672467370803 0.4516869502502125 0.6514945206311888 1.0 0.9324309562542956 2 Q13153 1
85
+ Heterogeneous nuclear ribonucleoprotein Q acidic domain [IPR041337] 0.7215661901802423 0.4278309513721032 0.6687742009648279 1.0 0.936508354538831 2 O60506 1
86
+ CRA domain [IPR013144] 0.7197016780609135 0.4227967242224942 0.6724435778840181 1.0 0.9368817467825618 2 Q9NWU2 1
87
+ CTLH/CRA C-terminal to LisH motif domain [IPR024964] 0.7197016780609135 0.4227967242224942 0.6724435778840181 1.0 0.9368817467825618 2 Q9NWU2 1
88
+ CRK, C-terminal SH3 domain [IPR035458] 0.7091361093847174 0.3948052653259342 0.6929866087810628 1.0 0.9387263235521226 2 P46109 1
89
+ CRK, N-terminal SH3 domain [IPR035457] 0.7091361093847174 0.3948052653259342 0.6929866087810628 1.0 0.9387263235521226 2 P46109 1
90
+ BSD domain [IPR005607] 0.7041640770665076 0.3819562508896966 0.7024938154728306 1.0 0.9397395207865684 2 Q9NW68 1
91
+ CARG-binding factor, N-terminal [IPR012956] 0.698881292728408 0.3685377561230011 0.7124722977910922 1.0 0.946374094356172 2 Q14103 1
92
+ OCRE domain [IPR041591] 0.6942200124300812 0.3569018004476948 0.721165321754146 1.0 0.9511461071711104 2 P78332 1
93
+ Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain [IPR044862] 0.5424662352366949 0.3556584389994657 0.7220963733220032 1.0 0.9517185396058871 3 P13674 1
94
+ Potassium channel tetramerisation-type BTB domain [IPR003131] 0.6908017402113186 0.3484923543768025 0.7274704547276702 1.0 0.9534232127619484 2 Q96CX2 1
95
+ F-BAR domain [IPR031160] 0.6814791796146752 0.3261003800695873 0.7443484094781618 1.0 0.9576024660676266 2 Q9UKS6 1
96
+ FCH domain [IPR001060] 0.6814791796146752 0.3261003800695873 0.7443484094781618 1.0 0.9576024660676266 2 Q9UKS6 1
97
+ Band 7 domain [IPR001107] 0.3890732696729123 0.3240799294540419 0.7458775215999713 1.0 0.9576024660676266 8 Q9UJZ1,Q99623 2
98
+ Extended synaptotagmin, C2A domain [IPR037733] 0.6796146674953425 0.3217189378145956 0.7476656297011206 1.0 0.9576024660676266 2 A0FGR8 1
99
+ Synaptotagmin, SMP domain [IPR039010] 0.6796146674953425 0.3217189378145956 0.7476656297011206 1.0 0.9576024660676266 2 A0FGR8 1
100
+ Extended synaptotagmin, C2B domain [IPR037749] 0.6796146674953425 0.3217189378145956 0.7476656297011206 1.0 0.9576024660676266 2 A0FGR8 1
101
+ Extended synaptotagmin, C-terminal C2 domain [IPR037752] 0.6796146674953425 0.3217189378145956 0.7476656297011206 1.0 0.9576024660676266 2 A0FGR8 1
102
+ Synaptotagmin-like mitochondrial-lipid-binding domain [IPR031468] 0.6796146674953425 0.3217189378145956 0.7476656297011206 1.0 0.9576024660676266 2 A0FGR8 1
103
+ Proteasomal ATPase OB C-terminal domain [IPR032501] 0.4245723172628256 0.2928152552839853 0.7696633670613333 1.0 0.9604998681995212 5 P62195,P62191,P62333,P17980 4
104
+ v-SNARE, coiled-coil homology domain [IPR042855] 0.5129397016747558 0.280123526264341 0.7793827356230703 1.0 0.9604998681995212 3 O75396 1
105
+ Longin domain [IPR010908] 0.5129397016747558 0.280123526264341 0.7793827356230703 1.0 0.9604998681995212 3 O75396 1
106
+ Immunoglobulin-like domain [IPR007110] 0.3505692494553509 0.2801099836850549 0.7793931253205924 1.0 0.9604998681995212 13 P10586,Q08722,Q9Y639,P35613 4
107
+ Phospholipase/carboxylesterase/thioesterase [IPR003140] 0.657551274083278 0.27241166560784 0.7853055039057779 1.0 0.9604998681995212 2 O75608 1
108
+ Glutathione S-transferase, C-terminal-like [IPR010987] 0.3551540853307742 0.267933824797688 0.7887502568410056 1.0 0.9612847978044072 12 P28161,Q9H7Z7,Q9Y696 3
109
+ Zinc finger C2H2 AKAP95-type [IPR034736] 0.5026422132421552 0.2559532786897883 0.7979869140069953 1.0 0.9648072963953378 3 O43823,Q5BKZ1 2
110
+ Exosome complex component, N-terminal domain [IPR025721] 0.6435674331883249 0.2436670501082473 0.8074886944749409 1.0 0.9651269968103928 2 Q9Y3B2 1
111
+ SCP2 sterol-binding domain [IPR003033] 0.4958035436742403 0.2405584909910234 0.8098973248671437 1.0 0.9651269968103928 3 P51659,P22307 2
112
+ ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain [IPR004100] 0.4266169154228768 0.2396866746163855 0.8105731659827391 1.0 0.9651269968103928 4 P21281,P38606,P06576 3
113
+ ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain [IPR000194] 0.4266169154228768 0.2396866746163855 0.8105731659827391 1.0 0.9651269968103928 4 P21281,P38606,P06576 3
114
+ 60S ribosomal protein L10P, insertion domain [IPR040637] 0.6407706650093319 0.2381581137474256 0.8117584628742536 1.0 0.9651269968103928 2 Q9UKD2 1
115
+ Heat shock protein Hsp90, N-terminal [IPR020575] 0.4259950248756159 0.238017257203381 0.8118677094759701 1.0 0.9651269968103928 4 P14625,P07900,Q12931 3
116
+ Far upstream element-binding protein, C-terminal [IPR015096] 0.6389061528900032 0.2345304081064233 0.814573229117461 1.0 0.9651269968103928 2 Q92945 1
117
+ Histone-binding protein RBBP4, N-terminal [IPR022052] 0.6379738968303387 0.2327300684606076 0.815971018973267 1.0 0.9651269968103928 2 Q16576 1
118
+ Death domain [IPR000488] 0.4920733602735566 0.2323870233996901 0.8162374269059467 1.0 0.9651269968103928 3 Q12955,Q13546 2
119
+ FCP1 homology domain [IPR004274] 0.489897419956491 0.2276947592650569 0.8198835469353365 1.0 0.9663652901417976 3 Q8WVY7,Q3ZCQ8 2
120
+ Signal recognition particle SRP54, helical bundle [IPR013822] 0.6286513362336953 0.2152248038503316 0.8295920533661096 1.0 0.9691247222869906 2 P61011 1
121
+ Signal recognition particle, SRP54 subunit, GTPase domain [IPR000897] 0.6286513362336953 0.2152248038503316 0.8295920533661096 1.0 0.9691247222869906 2 P61011 1
122
+ Chromo domain [IPR023780] 0.4142675135582225 0.2075278349093306 0.8355976566994485 1.0 0.9717911220046376 4 P83916 1
123
+ Man1/Src1, C-terminal [IPR018996] 0.6236793039154854 0.2062610917243753 0.836586969328883 1.0 0.9717911220046376 2 Q8NC56 1
124
+ RBM3/CIRBP, RNA recognition motif [IPR034278] 0.619328775637031 0.198631530447891 0.8425509873034287 1.0 0.9741368697188002 2 Q14011 1
125
+ Peptidase M41 [IPR000642] 0.6087632069608495 0.1809357445685445 0.8564180117626603 1.0 0.9761102527823156 2 Q96TA2 1
126
+ Acyl-CoA dehydrogenase/oxidase, N-terminal [IPR013786] 0.3619670090258257 0.1748722965280682 0.8611799789881587 1.0 0.9761102527823156 7 Q9H845,Q709F0,P49748,P45954,P11310,Q92947 6
127
+ Acyl-CoA dehydrogenase/oxidase C-terminal [IPR009075] 0.3619670090258257 0.1748722965280682 0.8611799789881587 1.0 0.9761102527823156 7 Q9H845,Q709F0,P49748,P45954,P11310,Q92947 6
128
+ Prolyl 4-hydroxylase, alpha subunit [IPR006620] 0.3809192463950331 0.1616670663804847 0.8715680405384663 1.0 0.9761102527823156 5 P13674 1
129
+ Oxoglutarate/iron-dependent dioxygenase [IPR005123] 0.3809192463950331 0.1616670663804847 0.8715680405384663 1.0 0.9761102527823156 5 P13674 1
130
+ EXPERA domain [IPR033118] 0.5913610938471128 0.1543635501520394 0.8773230919113597 1.0 0.9761934506758128 2 Q5BJF2 1
131
+ UBX domain [IPR001012] 0.3611011242071351 0.1510524609546334 0.8799343327661378 1.0 0.9768957379010824 6 O94888,Q92575,Q9UNZ2 3
132
+ NAD-dependent epimerase/dehydratase [IPR001509] 0.5711622125543938 0.1274940083869143 0.8985494150996398 1.0 0.9851113371521532 2 Q9NRG7 1
133
+ Thioesterase domain [IPR006683] 0.5553138595400923 0.1093175198289949 0.9129506510584896 1.0 0.9902837960120072 2 O00154 1
134
+ Peptidyl-prolyl cis-trans isomerase, PpiC-type [IPR000297] 0.5494095711622171 0.1031770117751726 0.917822484470703 1.0 0.9902837960120072 2 Q13526 1
135
+ 2-oxoacid dehydrogenase acyltransferase, catalytic domain [IPR001078] 0.4162262977929859 0.1024860532651403 0.91837088243973 1.0 0.9902837960120072 3 O00330,P36957 2
136
+ Cobalamin (vitamin B12)-binding domain [IPR006158] 0.5453697949036778 0.0991676901125093 0.9210051279291496 1.0 0.9913070458746333 2 Q99707 1
137
+ Pyrroline-5-carboxylate reductase, catalytic, N-terminal [IPR028939] 0.539154754505915 0.0932982554752312 0.9256666179685612 1.0 0.9913070458746333 2 P32322 1
138
+ Pyrroline-5-carboxylate reductase, dimerisation domain [IPR029036] 0.539154754505915 0.0932982554752312 0.9256666179685612 1.0 0.9913070458746333 2 P32322 1
139
+ Electron transfer flavoprotein, alpha/beta-subunit, N-terminal [IPR014730] 0.536668738346813 0.0910501721768217 0.9274527249514904 1.0 0.9913070458746333 2 P38117 1
140
+ Rhodanese-like domain [IPR001763] 0.3468118195956389 0.0803066551040916 0.9359933653042176 1.0 0.9913070458746333 5 P25325,Q16762,P40818,Q99956 4
141
+ tRNA-binding domain [IPR002547] 0.5205096333126309 0.0777758753483227 0.9380063369891716 1.0 0.9914764611360084 2 P54577 1
142
+ ENTH domain [IPR013809] 0.3863848305875072 0.070199085500307 0.9440352021965666 1.0 0.9946365988595872 3 Q14677,Q9Y6I3 2
143
+ Nuclear transport factor 2 domain [IPR002075] 0.3442164179104429 0.0677701608634469 0.945968597316037 1.0 0.9950955279083448 4 Q9UN86,P61970,Q9UBU9 3
144
+ Nuclear transport factor 2, eukaryote [IPR018222] 0.3442164179104429 0.0677701608634469 0.945968597316037 1.0 0.9950955279083448 4 Q9UN86,P61970,Q9UBU9 3
145
+ Peptidase M20, dimerisation domain [IPR011650] 0.5037290242386719 0.0663014341143155 0.947137841481012 1.0 0.9950955279083448 2 Q96KP4 1
146
+ CDC48, N-terminal subdomain [IPR003338] 0.4965817277812444 0.0620743305549708 0.95050363881619 1.0 0.9970509363549253 2 P46459 1
147
+ CDC48, domain 2 [IPR004201] 0.4965817277812444 0.0620743305549708 0.95050363881619 1.0 0.9970509363549253 2 P46459 1
148
+ CAP Gly-rich domain [IPR000938] 0.3627603357165093 0.0513901540983798 0.9590146302990552 1.0 0.9995846958307736 3 Q14203,Q99426 2
149
+ Cyclin, N-terminal [IPR006671] 0.3596518495492722 0.0493173702609114 0.9606663768947636 1.0 0.9995846958307736 3 O95067,P20248 2
150
+ Cyclin, C-terminal domain [IPR004367] 0.3596518495492722 0.0493173702609114 0.9606663768947636 1.0 0.9995846958307736 3 O95067,P20248 2
151
+ Ancestral coatomer element 1, Sec16/Sec31 [IPR024298] 0.4683032939714237 0.0487652647091231 0.9611063639709952 1.0 0.9995846958307736 2 O94979 1
152
+ Arf GTPase activating protein [IPR001164] 0.4639527656929901 0.0471513077757622 0.96239263508961 1.0 0.999831266829325 2 Q8N6T3 1
153
+ Exportin-2, central domain [IPR013713] 0.3509480882810165 0.0439727483576339 0.9649261265089382 1.0 0.999831266829325 3 O15397,P55060 2
154
+ Rab-GTPase-TBC domain [IPR000195] 0.3246268656716358 0.0420122192938992 0.9664889571303684 1.0 0.999831266829325 4 Q8TC07,Q9Y3P9,Q66K14 3
155
+ Survival motor neuron [IPR010304] 0.4350528278433967 0.0388374911342448 0.9690199537685384 1.0 0.999831266829325 2 Q16637 1
156
+ CTP synthase GATase domain [IPR033828] 0.4244872591672028 0.0366855516615527 0.9707357289927444 1.0 0.999831266829325 2 Q9NRF8 1
157
+ CTP synthase, N-terminal [IPR017456] 0.4244872591672028 0.0366855516615527 0.9707357289927444 1.0 0.999831266829325 2 Q9NRF8 1
158
+ Adenylate kinase, active site lid domain [IPR007862] 0.4192044748290964 0.0357571004947958 0.9714760400199812 1.0 0.999831266829325 2 P54819 1
159
+ Peripheral subunit-binding domain [IPR004167] 0.4160969546302154 0.035253094729659 0.9718779250439072 1.0 0.999831266829325 2 O00330 1
160
+ ELMO domain [IPR006816] 0.4108141702921165 0.0344634516483755 0.972507586383928 1.0 0.999831266829325 2 Q8IZ81 1
161
+ CBS domain [IPR000644] 0.3219284603421389 0.0337645191615184 0.973064929410649 1.0 0.999831266829325 5 Q8NE01,P54619,P51790,P12268 4
162
+ Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain [IPR014038] 0.405531385954025 0.0337529458690689 0.9730741583016512 1.0 0.999831266829325 2 P24534 1
163
+ Elongation factor 1 beta central acidic region, eukaryote [IPR018940] 0.405531385954025 0.0337529458690689 0.9730741583016512 1.0 0.999831266829325 2 P24534 1
164
+ Acyl transferase [IPR014043] 0.3943443132380548 0.0324823835423349 0.974087364513186 1.0 0.999831266829325 2 Q8IVS2 1
165
+ Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminal [IPR018955] 0.388750776880062 0.031953095423237 0.9745094562079044 1.0 0.999831266829325 2 Q15120 1
166
+ Histidine kinase domain [IPR005467] 0.388750776880062 0.031953095423237 0.9745094562079044 1.0 0.999831266829325 2 Q15120 1
167
+ Serine-tRNA ligase catalytic core domain [IPR033729] 0.3452454940957223 0.0295525881415113 0.9764238779625702 1.0 0.999831266829325 2 P49591 1
168
+ Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain [IPR044861] 0.3396519577377416 0.0293982417268597 0.9765469750986966 1.0 0.999831266829325 2 O60568 1
169
+ ZU5 domain [IPR000906] 0.3349906774394144 0.029287307898361 0.9766354493913678 1.0 0.999831266829325 2 Q12955 1
170
+ Ribosomal protein L11, N-terminal [IPR020784] 0.3225605966438896 0.0290571151143951 0.9768190385238537 1.0 0.999831266829325 2 Q9Y3B7 1
171
+ Ribosomal protein L11, C-terminal [IPR020783] 0.3225605966438896 0.0290571151143951 0.9768190385238537 1.0 0.999831266829325 2 Q9Y3B7 1
172
+ rRNA-processing arch domain [IPR025696] 0.3157240522063524 0.0289637932360981 0.976893467283252 1.0 0.999831266829325 2 Q15477 1
173
+ ATP-dependent RNA helicase Ski2, C-terminal [IPR012961] 0.3157240522063524 0.0289637932360981 0.976893467283252 1.0 0.999831266829325 2 Q15477 1
174
+ RuvB-like, AAA-lid domain [IPR041048] 0.3073337476693719 0.0288744660917611 0.9769647102355136 1.0 0.999831266829325 2 Q9Y230 1
175
+ TIP49, P-loop domain [IPR010339] 0.3073337476693719 0.0288744660917611 0.9769647102355136 1.0 0.999831266829325 2 Q9Y230 1
176
+ Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal [IPR007886] 0.299875699192057 0.0288139251610978 0.9770129948191126 1.0 0.999831266829325 2 Q13423 1
177
+ Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain [IPR007698] 0.299875699192057 0.0288139251610978 0.9770129948191126 1.0 0.999831266829325 2 Q13423 1
178
+ 3'-5' exonuclease domain [IPR002562] 0.2840273461777634 0.0287285514431922 0.9770810850026868 1.0 0.999831266829325 2 Q9NVH0 1
179
+ Domain of unknown function DUF4217 [IPR025313] 0.3089835250233159 0.0263757889100655 0.9789576050813544 1.0 1.0 3 Q13206,Q8NHQ9 2
180
+ Sorting nexin Vps5-like, C-terminal [IPR015404] 0.3094539433016173 0.0258224294599698 0.9793989716905174 1.0 1.0 4 Q9Y5X3 1
181
+ GRAM domain [IPR004182] 0.2918868511035163 0.0222743815379461 0.9822290843825132 1.0 1.0 3 Q13614,Q66K14 2
182
+ Ribosomal protein S10 domain [IPR027486] 0.2912651538700717 0.0221510344921705 0.9823274768092732 1.0 1.0 3 P60866,P82664 2
183
+ Ran binding domain [IPR000156] 0.2814054726368079 0.0036593673340899 0.9970802538181966 1.0 1.0 4 Q9UKX7,P43487,Q9H6Z4 3
interpro_domain/selections.json ADDED
The diff for this file is too large to render. See raw diff
 
interpro_family/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Mitochondrial carrier protein [IPR002067]", "1": "Glutathione Transferase family [IPR040079]"}
interpro_family/advanced/plot_0.png ADDED

Git LFS Details

  • SHA256: 180dfa072371f3d5bdccec1d5dd5a0c22e4200efa7446436b59f28795e5f7315
  • Pointer size: 131 Bytes
  • Size of remote file: 187 kB
interpro_family/advanced/plot_1.png ADDED

Git LFS Details

  • SHA256: 15552eee58f0480c8466d3739c4e51edb8f17096381cdd46ac0bae808c3d5f4f
  • Pointer size: 131 Bytes
  • Size of remote file: 196 kB
interpro_family/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Mitochondrial carrier protein [IPR002067]", "1": "Glutathione Transferase family [IPR040079]", "2": "Short-chain dehydrogenase/reductase SDR [IPR002347]", "3": "Small GTPase [IPR001806]", "4": "26S proteasome regulatory subunit P45-like [IPR005937]"}
interpro_family/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: afeb11ed3e7396dd0f2977e791ccae1effa4bb1878ff6a05c87f8e937bed05df
  • Pointer size: 131 Bytes
  • Size of remote file: 144 kB
interpro_family/basic/plot_1.png ADDED

Git LFS Details

  • SHA256: 5ba8dcabfb5bf858a8569a9dc3d612b66203e711772a133edfaf35bb09b108e6
  • Pointer size: 131 Bytes
  • Size of remote file: 137 kB
interpro_family/basic/plot_2.png ADDED

Git LFS Details

  • SHA256: 05bb92ca0bb5837d26ecf8c0901250815f60627a20406e39c39393ec19c73561
  • Pointer size: 131 Bytes
  • Size of remote file: 137 kB
interpro_family/basic/plot_3.png ADDED

Git LFS Details

  • SHA256: 47dab26443e9d572a630de638e43af29a2b0fea104b35dcc4cdd0a8b6976bad8
  • Pointer size: 131 Bytes
  • Size of remote file: 142 kB
interpro_family/basic/plot_4.png ADDED

Git LFS Details

  • SHA256: aa04c0f87aa57df0d601db78793ff7ff0f801f8766d76dfcd74bd1715b450000
  • Pointer size: 131 Bytes
  • Size of remote file: 145 kB
interpro_family/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:620356ae30bc52b6a18e35be87c5751ae6e78ba4e4117aaf490592dc9121b6c7
3
+ size 226397
interpro_family/df_merge.tsv ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
2
+ Mitochondrial carrier protein [IPR002067] 12 13 2.6580728129196625 0.0078588911811079 5.686893203883495 11.07766990291262 0.8032246115450145 0.31892620527414 3.2338505495684404 1.5403272908315857 1.3918146051602212 0.3274613788058813 0.0020854405553751 1.0 0.1741653971767485 0.0011814468070448 1.4497628230363953e-07
3
+ Syntaxin [IPR045242] 3 8 2.1863728899488084 0.0287883353494142 2.674757281553398 5.815533980582524 0.7134969984167514 0.3462495636510407 1.4434464182805606 1.4295601388514203 1.142372356309129 0.3001529293380739 0.0063803247206459 1.0 1.0 0.0435926191526008 0.003721367796782
4
+ Glutathione Transferase family [IPR040079] 5 11 2.122602537136364 0.0337871721823204 2.6650485436893203 9.45388349514563 0.453215617797485 0.4615521029697171 1.6850115229858122 1.256172900264393 0.947748980990547 0.2879961408071128 0.0575030175044007 0.0652597674910206 0.1253337423142017 0.0435926191526008 0.0003671727016274