ligdis commited on
Commit
d9f176d
·
verified ·
1 Parent(s): c63c055

Upload folder using huggingface_hub

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. interpro_active_site/advanced/idx2term.json +1 -0
  2. interpro_active_site/basic/idx2term.json +1 -0
  3. interpro_active_site/consensus.joblib +3 -0
  4. interpro_active_site/df_merge.tsv +1 -0
  5. interpro_active_site/metrics.json +7 -0
  6. interpro_active_site/paths.json +1 -0
  7. interpro_active_site/result.tsv +7 -0
  8. interpro_active_site/selections.json +1 -0
  9. interpro_binding_site/advanced/idx2term.json +1 -0
  10. interpro_binding_site/basic/idx2term.json +1 -0
  11. interpro_binding_site/basic/plot_0.png +3 -0
  12. interpro_binding_site/basic/plot_1.png +3 -0
  13. interpro_binding_site/consensus.joblib +3 -0
  14. interpro_binding_site/df_merge.tsv +1 -0
  15. interpro_binding_site/metrics.json +7 -0
  16. interpro_binding_site/paths.json +1 -0
  17. interpro_binding_site/result.tsv +5 -0
  18. interpro_binding_site/selections.json +1 -0
  19. interpro_conserved_site/advanced/idx2term.json +1 -0
  20. interpro_conserved_site/advanced/plot_0.png +3 -0
  21. interpro_conserved_site/basic/idx2term.json +1 -0
  22. interpro_conserved_site/basic/plot_0.png +3 -0
  23. interpro_conserved_site/basic/plot_1.png +3 -0
  24. interpro_conserved_site/basic/plot_2.png +3 -0
  25. interpro_conserved_site/consensus.joblib +3 -0
  26. interpro_conserved_site/df_merge.tsv +3 -0
  27. interpro_conserved_site/metrics.json +7 -0
  28. interpro_conserved_site/paths.json +1 -0
  29. interpro_conserved_site/result.tsv +29 -0
  30. interpro_conserved_site/selections.json +1 -0
  31. interpro_domain/advanced/idx2term.json +1 -0
  32. interpro_domain/basic/idx2term.json +1 -0
  33. interpro_domain/basic/plot_0.png +3 -0
  34. interpro_domain/basic/plot_1.png +3 -0
  35. interpro_domain/basic/plot_10.png +3 -0
  36. interpro_domain/basic/plot_11.png +3 -0
  37. interpro_domain/basic/plot_12.png +3 -0
  38. interpro_domain/basic/plot_2.png +3 -0
  39. interpro_domain/basic/plot_3.png +3 -0
  40. interpro_domain/basic/plot_4.png +3 -0
  41. interpro_domain/basic/plot_5.png +3 -0
  42. interpro_domain/basic/plot_6.png +3 -0
  43. interpro_domain/basic/plot_7.png +3 -0
  44. interpro_domain/basic/plot_8.png +3 -0
  45. interpro_domain/basic/plot_9.png +3 -0
  46. interpro_domain/consensus.joblib +3 -0
  47. interpro_domain/df_merge.tsv +4 -0
  48. interpro_domain/metrics.json +7 -0
  49. interpro_domain/paths.json +1 -0
  50. interpro_domain/result.tsv +190 -0
interpro_active_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_active_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_active_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:042fdb2e1e412c5499e2b7596d935ef41503dad5335af0eb975c2f9d6aaf30e1
3
+ size 63560
interpro_active_site/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_active_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 2468,
4
+ "annotations_size": 52,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.3076923076923075
7
+ }
interpro_active_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_active_site/fragment/C416/C416_val_log2fc"}
interpro_active_site/result.tsv ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Serine carboxypeptidase, serine active site [IPR018202] 0.9679513184584178 1.812007800315637 0.0699849912457293 0.9770132389435584 0.1654190702171784 3 Q9H3G5,Q9HB40 2
3
+ Histidine acid phosphatase active site [IPR033379] 0.9075425790754224 1.6860812786273154 0.0917801453789544 0.9933022092823072 0.2071115544345327 2 Q9NPH0 1
4
+ Nucleoside diphosphate kinase, active site [IPR023005] 0.7915652879156487 1.2033930397552268 0.228824260049258 0.9999986448896572 0.4406985749096821 2 P22392 1
5
+ Ubiquitin-conjugating enzyme, active site [IPR023313] 0.3976081332536567 0.2210586686821375 0.8250467517375903 1.0 0.9977309555896442 6 Q16763 1
6
+ ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440] 0.4756690997566854 0.1476393209582667 0.8826274214993435 1.0 1.0 2 P53396 1
7
+ Ubiquitin-activating enzyme E1, Cys active site [IPR033127] 0.4129817444218936 0.0609778626024401 0.9513768393251508 1.0 1.0 3 P22314,Q8TBC4 2
interpro_active_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["ATP-citrate lyase/succinyl-CoA ligase, active site [IPR017440]", "ATP:guanido phosphotransferase active site [IPR022415]", "ATPase, alpha/beta subunit, nucleotide-binding domain, active site [IPR020003]", "Adenosine/AMP deaminase active site [IPR006650]", "Adenylosuccinate synthase, active site [IPR033128]", "Beta-ketoacyl synthase, active site [IPR018201]", "Citrate synthase active site [IPR019810]", "ClpP, Ser active site [IPR018215]", "ClpP, histidine active site [IPR033135]", "Cysteine peptidase, asparagine active site [IPR025661]", "Cysteine peptidase, cysteine active site [IPR000169]", "Cysteine peptidase, histidine active site [IPR025660]", "DNA methylase, C-5 cytosine-specific, active site [IPR018117]", "DNA topoisomerase I, active site [IPR018521]", "Ferrochelatase, active site [IPR019772]", "Glucose-6-phosphate dehydrogenase, active site [IPR019796]", "Glutaredoxin active site [IPR011767]", "Glyceraldehyde 3-phosphate dehydrogenase, active site [IPR020830]", "Glycosyl hydrolases family 31, active site [IPR030458]", "Histidine acid phosphatase active site [IPR033379]", "Hydroxymethylglutaryl-coenzyme A synthase, active site [IPR000590]", "L-lactate dehydrogenase, active site [IPR018177]", "Leu/Phe/Val dehydrogenases active site [IPR033524]", "Malate dehydrogenase, active site [IPR001252]", "Nucleoside diphosphate kinase, active site [IPR023005]", "Orotidine 5'-phosphate decarboxylase, active site [IPR018089]", "Peptidase S16, active site [IPR008268]", "Peptidase S26A, signal peptidase I, serine active site [IPR019756]", "Peptidase S8, subtilisin, His-active site [IPR022398]", "Peptidase S8, subtilisin, Ser-active site [IPR023828]", "Peptidase S9, serine active site [IPR002471]", "Peptidase family C14A, His active site [IPR016129]", "Peptidase family C14A, cysteine active site [IPR033139]", "Phosphoglycerate/bisphosphoglycerate mutase, active site [IPR001345]", "Phosphoribosylglycinamide formyltransferase, active site [IPR001555]", "Protein-tyrosine phosphatase, active site [IPR016130]", "Pyridine nucleotide-disulphide oxidoreductase, class I, active site [IPR012999]", "Pyruvate kinase, active site [IPR018209]", "Ribonuclease T2, His active site 1 [IPR018188]", "Ribonuclease T2, His active site 2 [IPR033130]", "Ribonucleotide reductase small subunit, acitve site [IPR030475]", "Serine carboxypeptidase, serine active site [IPR018202]", "Serine carboxypeptidases, histidine active site [IPR033124]", "Serine/threonine-protein kinase, active site [IPR008271]", "Thermonuclease active site [IPR002071]", "Thiolase, active site [IPR020610]", "Thiolase, acyl-enzyme intermediate active site [IPR020615]", "Transaldolase, active site [IPR018225]", "Triosephosphate isomerase, active site [IPR020861]", "Tyrosine-protein kinase, active site [IPR008266]", "Ubiquitin-activating enzyme E1, Cys active site [IPR033127]", "Ubiquitin-conjugating enzyme, active site [IPR023313]"], "available_proteins": ["ACAA2", "ACAT1", "ACAT2", "ACLY", "ACP2", "ACP6", "ADA", "ADSS", "APEH", "ATP5A1", "ATP5B", "ATP6V1A", "ATP6V1B2", "BLMH", "CAMK4", "CAPN1", "CASP2", "CASP3", "CDC34", "CDK1", "CDK12", "CDK2", "CDK4", "CDK5", "CDK6", "CKB", "CKMT1A*", "CLPP", "CPVL", "CS", "CSK", "CSNK1A1", "CSNK2A2", "CTSA", "CTSB", "DLD", "DNMT1", "DUSP3", "EIF2AK2", "FASN", "FECH", "G6PD", "GAA", "GAK", "GANAB", "GAPDH", "GART", "GLRX", "GLUD1", "GSK3A", "GSK3B", "GSR", "HADHB", "HMGCS1", "LDHA", "LDHB", "LONP1", "MAP2K1", "MAP2K2", "MAP4K4", "MAPK1", "MAPK3", "MARK2", "MDH1", "MDH2", "NEK9", "NME1", "NME2", "PAK2", "PBK", "PGAM1", "PIK3R4", "PKM", "PKN2", "PREP", "PRKAA2", "PRKACA", "PRPF4B", "PTK7", "PTPN1", "PTPN11", "RNASET2", "ROCK1", "RPS6KA3", "RRM2", "SCP2", "SCPEP1", "SEC11A", "SLK", "SND1", "SRPK1", "SUCLG1", "TALDO1", "TIGAR", "TOP1", "TPI1", "TPP2", "TXNRD1", "UBA1", "UBA2", "UBA3", "UBE2K", "UBE2L3", "UBE2M", "UBE2N", "UBE2S", "UMPS", "VRK1", "VRK2"], "leading_proteins": ["ACLY", "ACP6", "CPVL", "NME2", "SCPEP1", "UBA1", "UBA3", "UBE2S"]}
interpro_binding_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_binding_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Beta tubulin, autoregulation binding site [IPR013838]", "1": "EF-Hand 1, calcium-binding site [IPR018247]"}
interpro_binding_site/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: ab36a38369e64ebbdbbeee58c962b093fd2ea9b5a188598ffc443acb4cf1beb6
  • Pointer size: 131 Bytes
  • Size of remote file: 135 kB
interpro_binding_site/basic/plot_1.png ADDED

Git LFS Details

  • SHA256: e003d9855d5dd32620d4cbfdf9d61e66c1b7d8d6053518d4b57b6e354d82607c
  • Pointer size: 131 Bytes
  • Size of remote file: 147 kB
interpro_binding_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1595db9c9a105f228661ea69871569740e70cc1f0cb807123ebafac0a1b04d7d
3
+ size 56660
interpro_binding_site/df_merge.tsv ADDED
@@ -0,0 +1 @@
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
interpro_binding_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 2468,
4
+ "annotations_size": 27,
5
+ "title": "Average number of proteins per term",
6
+ "value": 4.148148148148148
7
+ }
interpro_binding_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_binding_site/fragment/C416/C416_val_log2fc"}
interpro_binding_site/result.tsv ADDED
@@ -0,0 +1,5 @@
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Peptidase M16, zinc-binding site [IPR001431] 0.7452747861562214 1.5492882877317715 0.1213124340029856 0.9695539480455704 0.3663845065186015 5 P22695,Q10713 2
3
+ Beta tubulin, autoregulation binding site [IPR013838] 0.7108042242079458 1.485851311494648 0.1373184544236685 0.9814662325709111 0.3663845065186015 6 Q9BVA1,P04350,P07437,P68371,Q13885 5
4
+ PPM-type phosphatase, divalent cation binding [IPR000222] 0.6171527066276228 0.5054021773890888 0.6132763898511415 0.9999999999927588 0.7199331533035139 3 O15355 1
5
+ EF-Hand 1, calcium-binding site [IPR018247] 0.2716461492483696 0.2166762408490565 0.828460665194859 1.0 0.8947375184104477 30 P80303,Q02818,O43852,Q14257,Q9BPX6 5
interpro_binding_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["2-oxo acid dehydrogenase, lipoyl-binding site [IPR003016]", "2Fe-2S ferredoxin, iron-sulphur binding site [IPR006058]", "6-phosphogluconate-binding site [IPR006184]", "AP endonuclease 1, binding site [IPR020847]", "APOBEC/CMP deaminase, zinc-binding [IPR016192]", "Aconitase family, 4Fe-4S cluster binding site [IPR018136]", "Adenylosuccinate synthase, GTP-binding site [IPR018220]", "Aminotransferase class-V, pyridoxal-phosphate binding site [IPR020578]", "Aminotransferase, class-II, pyridoxal-phosphate binding site [IPR001917]", "Aminotransferases, class-I, pyridoxal-phosphate-binding site [IPR004838]", "Beta tubulin, autoregulation binding site [IPR013838]", "Biotin-binding site [IPR001882]", "Copper centre Cu(A) [IPR001505]", "Cytochrome b5, heme-binding site [IPR018506]", "Cytochrome c oxidase, subunit Vb, zinc binding site [IPR020893]", "EF-Hand 1, calcium-binding site [IPR018247]", "Fumarate reductase/succinate dehydrogenase, FAD-binding site [IPR003952]", "Hexokinase, binding site [IPR019807]", "IQ motif, EF-hand binding site [IPR000048]", "PPM-type phosphatase, divalent cation binding [IPR000222]", "Peptidase M16, zinc-binding site [IPR001431]", "Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site [IPR018349]", "Protein kinase, ATP binding site [IPR017441]", "RNA polymerases, subunit N, zinc binding site [IPR020789]", "Serine hydroxymethyltransferase, pyridoxal phosphate binding site [IPR019798]", "Sigma-54 interaction domain, ATP-binding site 1 [IPR025662]", "Transketolase binding site [IPR020826]"], "available_proteins": ["ACACA", "ACO1", "ACO2", "ACTN1", "ACTN4", "ADSS", "APEX1", "APOBEC3C", "CALM3", "CALU", "CAMK4", "CAPN1", "CDK1", "CDK12", "CDK2", "CDK4", "CDK5", "CDK6", "CETN2", "COX2", "COX5B", "CSK", "CSNK1A1", "CSNK2A2", "CYB5B", "DLAT", "DLST", "DST", "EHD1", "EHD4", "EIF2AK2", "FKBP10", "GCAT", "GOT1", "GOT2", "GPD2", "GSK3A", "GSK3B", "HK1", "HK2", "IDE", "ILKAP", "IQGAP1", "LETM1", "MACF1", "MAP2K1", "MAP2K2", "MAP4K4", "MAPK1", "MAPK3", "MARK2", "MCCC1", "METAP2", "MICU1", "MYH10", "MYH14", "MYH9", "MYO1B", "MYO1C", "MYO1D", "MYO5A", "NRDC", "NUCB1", "NUCB2", "PA2G4", "PAK2", "PC", "PCCA", "PDCD6", "PEF1", "PGD", "PKN2", "PLS1", "PLS3", "PMPCA", "PMPCB", "POLR2L", "PPM1F", "PPM1G", "PRKAA2", "PRKACA", "PRKCSH", "PSAT1", "RAB18", "RCN1", "RCN2", "RHOT1", "RHOT2", "ROCK1", "RPS6KA3", "S100A11", "SDHA", "SDHB", "SHMT1", "SHMT2", "SLC25A12", "SLC25A24", "SLK", "SPTAN1", "SRI", "SRPK1", "STK26", "TKT", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "UBE3C", "UQCRC2", "VRK1"], "leading_proteins": ["CALU", "MICU1", "NUCB1", "NUCB2", "PMPCA", "PPM1G", "RCN2", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "UQCRC2"]}
interpro_conserved_site/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Proteasome beta-type subunit, conserved site [IPR016050]"}
interpro_conserved_site/advanced/plot_0.png ADDED

Git LFS Details

  • SHA256: 73c79e439dfc0eefe812798b6bda85267f13e2615f7eac0772d3a29dfec1e882
  • Pointer size: 131 Bytes
  • Size of remote file: 190 kB
interpro_conserved_site/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Proteasome beta-type subunit, conserved site [IPR016050]", "1": "Tubulin, conserved site [IPR017975]", "2": "14-3-3 protein, conserved site [IPR023409]"}
interpro_conserved_site/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: db7efba9ca743822c084b68c6e7bf9241107cf0e1ad27a7b9eef387b384cd52d
  • Pointer size: 131 Bytes
  • Size of remote file: 143 kB
interpro_conserved_site/basic/plot_1.png ADDED

Git LFS Details

  • SHA256: d7924b71aca99ea26c6794d6001637a8b08391ac881fab89b7d0621ae42d4dce
  • Pointer size: 131 Bytes
  • Size of remote file: 130 kB
interpro_conserved_site/basic/plot_2.png ADDED

Git LFS Details

  • SHA256: 1148b8aa032453ee58ca8475adf62aa416e2ef1a7cd2ba3f2f470705edee2471
  • Pointer size: 131 Bytes
  • Size of remote file: 140 kB
interpro_conserved_site/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:99b9958f54e28f7b17025df54881cfc9aefa352cbd454aa9498b490273f1e809
3
+ size 82238
interpro_conserved_site/df_merge.tsv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
2
+ Proteasome beta-type subunit, conserved site [IPR016050] 6 8 2.508926198796895 0.0121098782282349 3.7135922330097086 7.970873786407767 1.4913184573846054 0.1902243906475925 1.515457478026574 0.1681602725795027 1.0170822776023185 0.2455850375425174 1.0 1.0 0.004071454093033 3.684086308322036e-08 6.624514437802759e-08
3
+ ABC transporter-like, conserved site [IPR017871] 1 9 2.323843242062234 0.0201338971824107 2.7694174757281553 10.218446601941748 0.3896442308636141 0.4819689640161482 2.0043003889175366 2.2319066503087304 0.948959154182388 0.2971074262916467 1.0 0.1026081339138497 0.0193632099375005 0.0983610682747182 0.2914565107291916
interpro_conserved_site/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 2468,
4
+ "annotations_size": 249,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.5461847389558234
7
+ }
interpro_conserved_site/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_conserved_site/fragment/C416/C416_val_log2fc"}
interpro_conserved_site/result.tsv ADDED
@@ -0,0 +1,29 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ Proteasome beta-type subunit, conserved site [IPR016050] 0.836921134609671 2.508926198796895 0.0121098782282349 0.9518659884020376 0.0913745357221364 8 P28070,Q99436,P49720,P20618,P49721,P28074 6
3
+ ABC transporter-like, conserved site [IPR017871] 0.7708754504518236 2.323843242062234 0.0201338971824107 0.9936829140506368 0.1165893115911693 9 P08183 1
4
+ Tetraspanin, conserved site [IPR018503] 0.9233576642335756 1.7516041027693865 0.0798419066178741 0.999999998995962 0.2587483557926691 2 O60637 1
5
+ Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364] 0.9051094890510912 1.6759853502144582 0.0937410621707384 0.9999999999773106 0.2778752914346888 2 Q8N4Q0 1
6
+ Glycoside hydrolase, family 29, conserved site [IPR018526] 0.8718572587185698 1.537684880327172 0.1241256822665735 0.9999999999999952 0.3323365041330839 2 Q9BTY2 1
7
+ Ubiquitin specific protease, conserved site [IPR018200] 0.6752884077801761 1.5267341897762714 0.126827122011166 0.999999999999998 0.3338116034405002 7 Q86UV5,Q9UPU5 2
8
+ Mini-chromosome maintenance, conserved site [IPR018525] 0.7155600894998739 1.5065778110393766 0.1319189084879517 0.9999999999999994 0.3386371980773194 6 P33993,P33991,Q14566,P49736 4
9
+ Tubulin, conserved site [IPR017975] 0.7108042242079458 1.485851311494648 0.1373184544236685 1.0 0.3419229515149346 6 Q9BVA1,P04350,P07437,P68371,Q13885 5
10
+ Sterol reductase, conserved site [IPR018083] 0.8188031212199289 1.239271455603447 0.2152449859204506 1.0 0.4311443661791583 3 Q14739 1
11
+ HMG box A DNA-binding domain, conserved site [IPR017967] 0.7532424831171576 0.9887915899914184 0.3227651198142367 1.0 0.5357900988916329 3 P09429 1
12
+ 14-3-3 protein, conserved site [IPR023409] 0.582047116165706 0.9224241539676346 0.3563073755885364 1.0 0.557990795732991 6 P27348,P62258,Q04917,P31946,P61981 5
13
+ Cyclic nucleotide-binding, conserved site [IPR018488] 0.6508515815085096 0.6443165403502611 0.5193701920635276 1.0 0.6915677958492962 2 P10644 1
14
+ 4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900] 0.5985401459853977 0.4618558553986751 0.6441846927360615 1.0 0.7711634062080737 2 P21912 1
15
+ Zinc finger, RING-type, conserved site [IPR017907] 0.3553227572287919 0.4570859630691958 0.6476092591645835 1.0 0.7715536149855564 13 Q14527,Q5VTR2,P19474 3
16
+ GTP1/OBG, conserved site [IPR006074] 0.5835360908353562 0.4138854176155845 0.678958023852194 1.0 0.7978994845984202 2 P55039 1
17
+ Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326] 0.5774533657745308 0.3950862568984319 0.6927792309821594 1.0 0.8089411509158202 2 P24534 1
18
+ Aldehyde dehydrogenase, glutamic acid active site [IPR029510] 0.3963408190834546 0.3917613387520649 0.6952345634376929 1.0 0.8089411509158202 8 P30837 1
19
+ Chaperonin TCP-1, conserved site [IPR002194] 0.3715875641888576 0.2934829962912228 0.7691529945823761 1.0 0.8705413438682348 8 P50990,Q99832,P48643,P78371 4
20
+ ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847] 0.4756690997566854 0.1476393209582667 0.8826274214993435 1.0 0.9663430198716756 2 P53396 1
21
+ Clathrin adaptor complex, small chain [IPR000804] 0.4754563894523189 0.1455348845844893 0.8842885750196599 1.0 0.9663430198716756 3 P61923,Q92572 2
22
+ 3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180] 0.4740470397404629 0.1448311201194591 0.8848442109668353 1.0 0.9663430198716756 2 Q16836 1
23
+ Dynein light chain, type 1/2, conserved site [IPR019763] 0.4699918896999118 0.1379723791962041 0.890262246950023 1.0 0.9663895070679106 2 P63167 1
24
+ Phosphorylase pyridoxal-phosphate attachment site [IPR035090] 0.4651257096512513 0.1300460105056629 0.8965300246292665 1.0 0.9663895070679106 2 P06737 1
25
+ Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412] 0.2795922899733809 0.0998683041371606 0.920448880150602 1.0 0.9830546231514812 14 Q5JPH6,Q9P2J5,P07814 3
26
+ Heat shock protein Hsp90, conserved site [IPR019805] 0.4352941176470443 0.0857857525064148 0.9316367325760012 1.0 0.9871384953677632 3 P07900,P08238 2
27
+ Ubiquitin-activating enzyme E1, conserved site [IPR018074] 0.4128142741281405 0.064922658526092 0.948235579755053 1.0 0.9916049006943136 2 P22314 1
28
+ Procollagen-lysine 5-dioxygenase, conserved site [IPR001006] 0.4026763990267653 0.0562254769963508 0.9551621855535284 1.0 0.9916049006943136 2 O00469 1
29
+ Phosphatidylinositol 3/4-kinase, conserved site [IPR018936] 0.3804208944301371 0.0344323634729399 0.9725323764460992 1.0 0.992461318586388 3 P78527 1
interpro_conserved_site/selections.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"all_annotations": ["14-3-3 protein, conserved site [IPR023409]", "3-hydroxyacyl-CoA dehydrogenase, conserved site [IPR006180]", "3-hydroxyisobutyrate dehydrogenase-related, conserved site [IPR002204]", "4Fe-4S ferredoxin, iron-sulphur binding, conserved site [IPR017900]", "ABC transporter-like, conserved site [IPR017871]", "AMP-binding, conserved site [IPR020845]", "AP endonuclease 1, conserved site [IPR020848]", "AT hook, DNA-binding motif [IPR017956]", "ATP synthase, F1 complex, gamma subunit conserved site [IPR023632]", "ATP-citrate lyase/succinyl-CoA ligase, conserved site [IPR033847]", "ATP-dependent RNA helicase DEAD-box, conserved site [IPR000629]", "ATPase, AAA-type, conserved site [IPR003960]", "ATPase, OSCP/delta subunit, conserved site [IPR020781]", "Acin1, RNSP1-SAP18 binding (RSB) motif [IPR032552]", "Actin, conserved site [IPR004001]", "Actin/actin-like conserved site [IPR020902]", "Actinin-type actin-binding domain, conserved site [IPR001589]", "Acyl-CoA dehydrogenase, conserved site [IPR006089]", "Acyl-CoA-binding protein, ACBP, conserved site [IPR022408]", "Adenylate kinase, conserved site [IPR033690]", "Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 [IPR008142]", "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 [IPR008143]", "Alcohol dehydrogenase, zinc-type, conserved site [IPR002328]", "Aldehyde dehydrogenase, cysteine active site [IPR016160]", "Aldehyde dehydrogenase, glutamic acid active site [IPR029510]", "Aldo/keto reductase, conserved site [IPR018170]", "Alpha-D-phosphohexomutase, conserved site [IPR016066]", "Aminoacyl-tRNA synthetase, class I, conserved site [IPR001412]", "Anion exchange, conserved site [IPR018241]", "Annexin repeat, conserved site [IPR018252]", "Apoptosis regulator, Bcl-2, BH1 motif, conserved site [IPR020717]", "Apoptosis regulator, Bcl-2, BH2 motif, conserved site [IPR020726]", "Apoptosis regulator, Bcl-2, BH3 motif, conserved site [IPR020728]", "BUD31/G10-related, conserved site [IPR018230]", "Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site [IPR018314]", "Band 7/stomatin-like, conserved site [IPR018080]", "Bax inhibitor 1, conserved site [IPR006213]", "Bromodomain, conserved site [IPR018359]", "C-type lectin, conserved site [IPR018378]", "CAP, conserved site, C-terminal [IPR028417]", "CAP, conserved site, N-terminal [IPR018106]", "Cadherin conserved site [IPR020894]", "Calreticulin/calnexin, conserved site [IPR018124]", "Carbohydrate/purine kinase, PfkB, conserved site [IPR002173]", "Chaperonin Cpn60, conserved site [IPR018370]", "Chaperonin GroES, conserved site [IPR018369]", "Chaperonin TCP-1, conserved site [IPR002194]", "Chromo domain, conserved site [IPR023779]", "Clathrin adaptor complex, small chain [IPR000804]", "Clathrin adaptor, mu subunit, conserved site [IPR018240]", "Coproporphyrinogen III oxidase, conserved site [IPR018375]", "Cullin, conserved site [IPR016157]", "Cyclic nucleotide-binding, conserved site [IPR018488]", "Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site [IPR020892]", "Cytochrome P450, conserved site [IPR017972]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 [IPR029752]", "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site [IPR029753]", "DNA ligase, ATP-dependent, conserved site [IPR016059]", "DNA methylase, C-5 cytosine-specific, conserved site [IPR031303]", "DNA methylase, N-6 adenine-specific, conserved site [IPR002052]", "DNA topoisomerase, type IIA, conserved site [IPR018522]", "DNA-directed DNA polymerase, family B, conserved site [IPR017964]", "DNA-directed RNA polymerase, 30-40kDa subunit, conserved site [IPR001514]", "DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site [IPR002464]", "Dihydrofolate reductase conserved site [IPR017925]", "Dihydroorotase, conserved site [IPR002195]", "DnaJ domain, conserved site [IPR018253]", "Dynamin, GTPase region, conserved site [IPR019762]", "Dynein light chain, type 1/2, conserved site [IPR019763]", "EGF-like calcium-binding, conserved site [IPR018097]", "EGF-like, conserved site [IPR013032]", "Electron transfer flavoprotein subunit alpha, conserved site [IPR018206]", "Electron transfer flavoprotein, beta-subunit, conserved site [IPR000049]", "Enolase, conserved site [IPR020809]", "Enoyl-CoA hydratase/isomerase, conserved site [IPR018376]", "F-actin capping protein, alpha subunit, conserved site [IPR017865]", "F-actin capping protein, beta subunit, conserved site [IPR019771]", "FERM conserved site [IPR019747]", "FLAP/GST2/LTC4S, conserved site [IPR018295]", "Fatty acid desaturase type 1, conserved site [IPR001522]", "Fibrillarin, conserved site [IPR020813]", "Fork head domain conserved site 2 [IPR030456]", "Fork head domain conserved site1 [IPR018122]", "Formate-tetrahydrofolate ligase, FTHFS, conserved site [IPR020628]", "Fructose-bisphosphate aldolase class-I active site [IPR029768]", "Fumarate lyase, conserved site [IPR020557]", "GHMP kinase, ATP-binding, conserved site [IPR006203]", "GTP1/OBG, conserved site [IPR006074]", "Galactokinase, conserved site [IPR019741]", "Gamma-glutamyl phosphate reductase GPR, conserved site [IPR020593]", "Glucosamine-6-phosphate isomerase, conserved site [IPR018321]", "Glutamate 5-kinase, conserved site [IPR019797]", "Glycoside hydrolase family 27/36, conserved site [IPR000111]", "Glycoside hydrolase, family 29, conserved site [IPR018526]", "Glycoside hydrolase, family 35, conserved site [IPR019801]", "Glycosyl hydrolases family 31, conserved site [IPR030459]", "Glyoxalase I, conserved site [IPR018146]", "Golgin subfamily A member 2, C-terminal binding motif [IPR043937]", "Guanine-nucleotide dissociation stimulator, CDC24, conserved site [IPR001331]", "Guanylate kinase, conserved site [IPR020590]", "HIND motif [IPR045347]", "HMG box A DNA-binding domain, conserved site [IPR017967]", "HMG-I/HMG-Y, DNA-binding, conserved site [IPR000637]", "Haem oxygenase conserved site [IPR018207]", "Heat shock protein 70, conserved site [IPR018181]", "Heat shock protein Hsp90, conserved site [IPR019805]", "Heavy-metal-associated, conserved site [IPR017969]", "Helix-hairpin-helix motif, class 2 [IPR008918]", "Hexapeptide transferase, conserved site [IPR018357]", "Histidine triad, conserved site [IPR019808]", "Histone H4, conserved site [IPR019809]", "IMP dehydrogenase / GMP reductase, conserved site [IPR015875]", "Immunoglobulin/major histocompatibility complex, conserved site [IPR003006]", "Intermediate filament protein, conserved site [IPR018039]", "Isocitrate/isopropylmalate dehydrogenase, conserved site [IPR019818]", "Kinesin motor domain, conserved site [IPR019821]", "Lipocalin family conserved site [IPR022272]", "Lysosome-associated membrane glycoprotein, conserved site [IPR018134]", "Macrophage migration inhibitory factor, conserved site [IPR019829]", "Malic enzyme, conserved site [IPR015884]", "Methylthiotransferase, conserved site [IPR020612]", "Mini-chromosome maintenance, conserved site [IPR018525]", "Mitogen-activated protein (MAP) kinase, conserved site [IPR003527]", "Mrp, conserved site [IPR000808]", "Myristoyl-CoA:protein N-myristoyltransferase, conserved site [IPR022678]", "NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site [IPR020396]", "NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site [IPR014029]", "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site [IPR001949]", "NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site [IPR000283]", "NUDIX hydrolase, conserved site [IPR020084]", "Oxysterol-binding protein, conserved site [IPR018494]", "P-type trefoil, conserved site [IPR017957]", "Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site [IPR001131]", "Peptidase S26A, signal peptidase I, conserved site [IPR019758]", "Phosphatidylethanolamine-binding, conserved site [IPR001858]", "Phosphatidylinositol 3/4-kinase, conserved site [IPR018936]", "Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site [IPR018091]", "Phosphofructokinase, conserved site [IPR015912]", "Phosphoglucose isomerase, conserved site [IPR018189]", "Phosphoglycerate kinase, conserved site [IPR015911]", "Phosphomannose isomerase, type I, conserved site [IPR018050]", "Phosphoribosyl pyrophosphate synthetase, conserved site [IPR000842]", "Phosphoribosylglycinamide synthetase, conserved site [IPR020559]", "Phosphorylase pyridoxal-phosphate attachment site [IPR035090]", "Polyamine biosynthesis domain, conserved site [IPR030373]", "Polyprenyl synthetase, conserved site [IPR033749]", "Procollagen-lysine 5-dioxygenase, conserved site [IPR001006]", "Profilin conserved site [IPR027310]", "Proliferating cell nuclear antigen, PCNA, conserved site [IPR022659]", "Proteasome beta-type subunit, conserved site [IPR016050]", "Protein phosphatase 2A regulatory subunit PR55, conserved site [IPR018067]", "Proteinase inhibitor I25, cystatin, conserved site [IPR018073]", "Purine phosphorylase, family 2, conserved site [IPR018099]", "Quinone oxidoreductase/zeta-crystallin, conserved site [IPR002364]", "RNA 3'-terminal phosphate cyclase-like, conserved site [IPR020719]", "RNA polymerase, beta subunit, conserved site [IPR007121]", "RNA polymerase, subunit H/Rpb5, conserved site [IPR020608]", "Ras GTPase-activating protein, conserved site [IPR023152]", "Retro-transposon transporting motif [IPR018892]", "Ribonuclease II/R, conserved site [IPR022966]", "Ribosomal S11, conserved site [IPR018102]", "Ribosomal S24e conserved site [IPR018098]", "Ribosomal protein L1, conserved site [IPR023673]", "Ribosomal protein L10e, conserved site [IPR018255]", "Ribosomal protein L11, conserved site [IPR020785]", "Ribosomal protein L13, conserved site [IPR023563]", "Ribosomal protein L13e, conserved site [IPR018256]", "Ribosomal protein L14P, conserved site [IPR019972]", "Ribosomal protein L15, conserved site [IPR001196]", "Ribosomal protein L15e, conserved site [IPR020925]", "Ribosomal protein L18e, conserved site [IPR021132]", "Ribosomal protein L19/L19e conserved site [IPR023638]", "Ribosomal protein L2, conserved site [IPR022671]", "Ribosomal protein L21e, conserved site [IPR018259]", "Ribosomal protein L22/L17, conserved site [IPR018260]", "Ribosomal protein L23/L25, conserved site [IPR001014]", "Ribosomal protein L24/L26, conserved site [IPR005825]", "Ribosomal protein L24e, conserved site [IPR023442]", "Ribosomal protein L27e, conserved site [IPR018262]", "Ribosomal protein L29, conserved site [IPR018254]", "Ribosomal protein L3, conserved site [IPR019926]", "Ribosomal protein L30, conserved site [IPR018038]", "Ribosomal protein L30e, conserved site [IPR022991]", "Ribosomal protein L31e, conserved site [IPR020052]", "Ribosomal protein L32e, conserved site [IPR018263]", "Ribosomal protein L34e, conserved site [IPR018065]", "Ribosomal protein L35Ae, conserved site [IPR018266]", "Ribosomal protein L37e, conserved site [IPR018267]", "Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site [IPR013000]", "Ribosomal protein L5, conserved site [IPR020929]", "Ribosomal protein L6, conserved site-2 [IPR002359]", "Ribosomal protein L7Ae conserved site [IPR004037]", "Ribosomal protein S10, conserved site [IPR018268]", "Ribosomal protein S13, conserved site [IPR018269]", "Ribosomal protein S17, conserved site [IPR019979]", "Ribosomal protein S17e, conserved site [IPR018273]", "Ribosomal protein S19e, conserved site [IPR018277]", "Ribosomal protein S2, conserved site [IPR018130]", "Ribosomal protein S28e conserved site [IPR028626]", "Ribosomal protein S3, conserved site [IPR018280]", "Ribosomal protein S3Ae, conserved site [IPR018281]", "Ribosomal protein S4, conserved site [IPR018079]", "Ribosomal protein S4e, N-terminal, conserved site [IPR018199]", "Ribosomal protein S5, N-terminal, conserved site [IPR018192]", "Ribosomal protein S6e, conserved site [IPR018282]", "Ribosomal protein S7, conserved site [IPR020606]", "Ribosomal protein S8e, conserved site [IPR018283]", "Ribosomal protein S9, conserved site [IPR020574]", "Ribosome maturation protein SBDS, conserved site [IPR018023]", "S-adenosyl-L-homocysteine hydrolase, conserved site [IPR020082]", "S-adenosylmethionine synthetase, conserved site [IPR022631]", "S100/Calbindin-D9k, conserved site [IPR001751]", "SAICAR synthetase, conserved site [IPR018236]", "SecY conserved site [IPR030659]", "Serpin, conserved site [IPR023795]", "Short-chain dehydrogenase/reductase, conserved site [IPR020904]", "Sodium/solute symporter, conserved site [IPR018212]", "Sodium:dicarboxylate symporter, conserved site [IPR018107]", "Squalene/phytoene synthase, conserved site [IPR019845]", "Stathmin, conserved site [IPR030514]", "Sterol reductase, conserved site [IPR018083]", "Succinyl-CoA synthetase, beta subunit, conserved site [IPR017866]", "Sugar transporter, conserved site [IPR005829]", "Sulfatase, conserved site [IPR024607]", "Syntaxin/epimorphin, conserved site [IPR006012]", "TPP-binding enzyme, conserved site [IPR000399]", "Terpene synthase, conserved site [IPR002365]", "Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site [IPR020867]", "Tetraspanin, conserved site [IPR018503]", "Thiolase, conserved site [IPR020613]", "Thioredoxin, conserved site [IPR017937]", "Thymidine kinase, conserved site [IPR020633]", "Thymidylate kinase, conserved site [IPR018095]", "Tr-type G domain, conserved site [IPR031157]", "Translation elongation factor EF1B, beta/delta chains, conserved site [IPR001326]", "Translation elongation factor Ts, conserved site [IPR018101]", "Translationally controlled tumour protein, conserved site [IPR018103]", "Tubulin, conserved site [IPR017975]", "UbiE/COQ5 methyltransferase, conserved site [IPR023576]", "Ubiquitin conserved site [IPR019954]", "Ubiquitin interacting motif [IPR003903]", "Ubiquitin specific protease, conserved site [IPR018200]", "Ubiquitin-activating enzyme E1, conserved site [IPR018074]", "Vinculin, conserved site [IPR000633]", "WD40 repeat, conserved site [IPR019775]", "XPG conserved site [IPR019974]", "YgfZ/GcvT conserved site [IPR017703]", "Zinc finger, PHD-type, conserved site [IPR019786]", "Zinc finger, RING-type, conserved site [IPR017907]"], "available_proteins": ["AAAS", "ABCB1", "ABCB7", "ABCC1", "ABCD3", "ABCE1", "ABCF1", "ABCF2", "ABCF3", "ACAA2", "ACAD9", "ACADM", "ACADVL", "ACAT1", "ACAT2", "ACBD3", "ACBD5", "ACIN1", "ACLY", "ACSL1", "ACSL3", "ACSL4", "ACTL6A", "ACTN1", "ACTN4", "ACTR1A", "ACTR1B", "ACTR2", "ACTR3", "ADH5", "ADK", "ADSL", "AFG3L2", "AHCY", "AHCYL1", "AK2", "AKR1A1", "AKR1B1", "ALDH18A1", "ALDH1A2", "ALDH1B1", "ALDH2", "ALDH3A2", "ALDH4A1", "ALDH5A1", "ALDH6A1", "ALDH7A1", "ALDH9A1", "ALDOA", "ALDOC", "ANXA1", "ANXA11", "ANXA2", "ANXA4", "ANXA6", "ANXA7", "AP1M1", "AP2M1", "AP2S1", "AP3M1", "AP3S1", "APEX1", "ARHGEF7", "ARIH2", "ATAD1", "ATP5C1", "ATP5O", "ATP7B", "BAG6", "BAK1", "BAZ1A", "BAZ1B", "BAZ2A", "BLM", "BOP1", "BPTF", "BRD2", "BUD31", "CAD", "CALR", "CANX", "CAP1", "CAPZA1", "CAPZA2", "CAPZB", "CBL", "CBR1", "CBX1", "CBX3", "CBX5", "CCT2", "CCT3", "CCT4", "CCT5", "CCT6A", "CCT7", "CCT8", "CDC40", "CDH2", "CDKAL1", "CETN2", "CHAF1B", "CHD1", "CHD4", "CMPK1", "COLEC12", "COPA", "COPZ1", "CORO1B", "CORO1C", "CPOX", "CSTB", "CSTF1", "CTBP2", "CTNNA1", "CUL1", "CUL2", "CUL3", "CUL4B", "CUL5", "CYP51A1", "DCAF13", "DCAF7", "DCPS", "DCXR", "DDX10", "DDX17", "DDX18", "DDX20", "DDX23", "DDX24", "DDX27", "DDX3X", "DDX42", "DDX46", "DDX47", "DDX49", "DDX5", "DDX51", "DDX54", "DDX55", "DDX6", "DHCR7", "DHFR", "DHRS7B", "DHX15", "DHX16", "DHX29", "DHX30", "DHX33", "DHX36", "DHX38", "DHX40", "DHX8", "DHX9", "DIDO1", "DIS3", "DNAJA1", "DNAJA3", "DNAJB1", "DNAJC1", "DNAJC10", "DNAJC11", "DNAJC9", "DNM1L", "DNM2", "DNMT1", "DRG1", "DRG2", "DSC3", "DSG2", "DST", "DTYMK", "DYNLL1", "DYNLL2", "EARS2", "ECH1", "ECHDC1", "ECHS1", "ECI1", "ECI2", "EEF1A2", "EEF1B2", "EEF1D", "EEF2", "EIF3I", "EIF4A1", "EIF4A2", "EIF4A3", "ENO1", "ENO2", "EPB41", "EPB41L2", "EPB41L3", "EPRS", "ERCC2", "ETFA", "ETFB", "EXO1", "EZR", "FBL", "FDFT1", "FDPS", "FEN1", "FLNA", "FLNB", "FLNC", "FOXC1", "FUCA1", "FUCA2", "GAA", "GALK1", "GANAB", "GART", "GCDH", "GEMIN5", "GFM1", "GLA", "GLB1", "GLO1", "GMPPB", "GNPDA1", "GNS", "GOLGA2", "GPI", "GRHPR", "GRWD1", "GSPT1", "GTF3C2", "H4C1*", "HADH", "HADHA", "HADHB", "HGS", "HIBADH", "HINT2", "HLA-A", "HLTF", "HMGA1", "HMGB1", "HMGB2", "HMGB3", "HMOX1", "HMOX2", "HSD17B10", "HSD17B12", "HSD17B4", "HSDL2", "HSP90AA1", "HSP90AB1", "HSP90B1", "HSPA13", "HSPA1B", "HSPA4", "HSPA4L", "HSPA8", "HSPA9", "HSPD1", "HSPE1", "HSPH1", "HYOU1", "IARS", "IARS2", "IBA57", "IDH1", "IDH2", "IDH3A", "IDH3B", "IDH3G", "ILVBL", "IMPDH2", "INA", "INTS12", "IQGAP1", "IVD", "KDM2A", "KDM5A", "KDSR", "KIF11", "KIF1A", "KIF20A", "KIF22", "KIF23", "KIF2A", "KIF2C", "KIF4A", "KIF5B", "LAMP1", "LARS", "LARS2", "LBR", "LIG3", "LMNA", "LMNB1", "LMNB2", "LSS", "MACF1", "MAPK1", "MAPK3", "MARS", "MAT2A", "MCM2", "MCM3", "MCM4", "MCM5", "MCM6", "MCM7", "ME2", "MGST2", "MID1", "MIF", "MPHOSPH8", "MPI", "MPP1", "MPP2", "MPP6", "MRPL3", "MRPS2", "MRPS5", "MRPS9", "MSN", "MTAP", "MTHFD1", "MTHFD1L", "MTOR", "NDUFS1", "NDUFS2", "NDUFS3", "NDUFV1", "NEFM", "NES", "NF1", "NKTR", "NLE1", "NMT1", "NNT", "NOP2", "NSD2", "NSF", "NUBP2", "NUDT1", "NUDT12", "NUDT5", "NUP153", "NUP37", "NUP43", "NVL", "OSBP", "OSBPL11", "OSBPL8", "OSBPL9", "P4HB", "PAFAH1B1", "PAICS", "PAK1IP1", "PBRM1", "PCK2", "PCNA", "PDIA3", "PDIA4", "PDIA6", "PEBP1", "PEPD", "PFKL", "PFKM", "PFKP", "PFN1", "PFN2", "PGK1", "PGM1", "PGM2", "PHF2", "PHF3", "PHGDH", "PHIP", "PI4KB", "PLEC", "PLOD1", "PLOD2", "PLRG1", "PLS1", "PLS3", "PNP", "POLA1", "POLD1", "POLR1B", "POLR1C", "POLR2B", "POLR2E", "PPIB", "PPID", "PPIF", "PPIL1", "PPIL2", "PPP2R2A", "PRKAR1A", "PRKAR2A", "PRKDC", "PRPF19", "PRPF4", "PRPS2", "PSMA4", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB6", "PSMB7", "PSMC1", "PSMC2", "PSMC3", "PSMC4", "PSMC5", "PSMC6", "PSMD4", "PWP2", "PYGB", "PYGL", "QARS", "RACK1", "RAE1", "RANBP2", "RARS", "RBBP4", "RCL1", "RDH13", "RDX", "RNF2", "RNF20", "RNF40", "RPL10", "RPL10A", "RPL11", "RPL12", "RPL13", "RPL13A", "RPL15", "RPL17", "RPL18", "RPL19", "RPL21", "RPL23", "RPL23A", "RPL24", "RPL26", "RPL27", "RPL27A", "RPL3", "RPL30", "RPL31", "RPL32", "RPL34", "RPL35", "RPL35A", "RPL37", "RPL4", "RPL7", "RPL7A", "RPL7L1", "RPL8", "RPL9", "RPS11", "RPS14", "RPS16", "RPS17", "RPS18", "RPS19", "RPS2", "RPS20", "RPS24", "RPS28", "RPS3", "RPS3A", "RPS4X", "RPS5", "RPS6", "RPS8", "RPS9", "RPSA", "RRP8", "RRP9", "RSF1", "RSL24D1", "S100A11", "SART1", "SBDS", "SCAF11", "SCD", "SCP2", "SDHB", "SEC11A", "SEC61A1", "SERPINH1", "SLC1A5", "SLC27A4", "SLC2A1", "SLC4A2", "SLC5A6", "SLIT2", "SMARCA4", "SMS", "SMU1", "SNRNP40", "SNU13", "SPTBN1", "SPTBN2", "SRCAP", "SRM", "STMN1", "STOM", "STX12", "STX18", "STX4", "STX5", "STX6", "STX7", "SUCLA2", "SUCLG1", "SUCLG2", "SV2A", "SYNE2", "TAP2", "TBL1XR1", "TBL3", "TCP1", "THOC6", "TK1", "TLN1", "TM7SF2", "TMBIM6", "TMX1", "TMX3", "TMX4", "TOP2A", "TOP2B", "TPT1", "TRIM21", "TRIM24", "TRIM25", "TRIM28", "TRIM33", "TRIP13", "TRMT11", "TSFM", "TSPAN3", "TSPAN6", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "TUBB6", "TUFM", "TXNDC5", "UBA1", "UBA2", "UHRF1", "USP10", "USP14", "USP24", "USP48", "USP5", "USP7", "USP9X", "UTP15", "UTP18", "UTRN", "VARS1", "VARS2", "VAT1", "VCL", "VCP", "VIM", "VPS4A", "VPS4B", "WARS", "WARS2", "WDHD1", "WDR1", "WDR11", "WDR18", "WDR3", "WDR36", "WDR5", "WDR61", "WDR77", "XPNPEP1", "YARS2", "YME1L1", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "YWHAZ", "ZADH2"], "leading_proteins": ["ABCB1", "ACLY", "ALDH1B1", "AP3S1", "CCT2", "CCT5", "CCT7", "CCT8", "COPZ1", "DRG2", "DYNLL1", "EARS2", "EEF1B2", "EPRS", "FUCA2", "HADH", "HLTF", "HMGB1", "HSP90AA1", "HSP90AB1", "LARS", "LBR", "MCM2", "MCM4", "MCM6", "MCM7", "PLOD2", "PRKAR1A", "PRKDC", "PSMB1", "PSMB2", "PSMB3", "PSMB4", "PSMB5", "PSMB7", "PYGL", "RNF20", "SDHB", "TRIM21", "TSPAN3", "TUBB", "TUBB2A", "TUBB2B", "TUBB4A", "TUBB4B", "UBA1", "USP24", "USP48", "YWHAB", "YWHAE", "YWHAG", "YWHAH", "YWHAQ", "ZADH2"]}
interpro_domain/advanced/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {}
interpro_domain/basic/idx2term.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"0": "Importin-beta, N-terminal domain [IPR001494]", "1": "Proteasome component (PCI) domain [IPR000717]", "2": "Tubulin/FtsZ, GTPase domain [IPR003008]", "3": "Tubulin/FtsZ, 2-layer sandwich domain [IPR018316]", "4": "GOLD domain [IPR009038]", "5": "14-3-3 domain [IPR023410]", "6": "K Homology domain, type 1 [IPR004088]", "7": "Pleckstrin homology domain [IPR001849]", "8": "Zinc finger, LIM-type [IPR001781]", "9": "K Homology domain [IPR004087]", "10": "EF-hand domain [IPR002048]", "11": "RecF/RecN/SMC, N-terminal [IPR003395]", "12": "MIF4G-like, type 3 [IPR003890]"}
interpro_domain/basic/plot_0.png ADDED

Git LFS Details

  • SHA256: d5d9caf7564223cbbb12432edbe2219d66657eb39d16090fc5d8552d7be56b26
  • Pointer size: 131 Bytes
  • Size of remote file: 133 kB
interpro_domain/basic/plot_1.png ADDED

Git LFS Details

  • SHA256: 92a3c239984e03ee7b10cdae6bfc90ea23375db739540f98cea4e61c5f6184a3
  • Pointer size: 131 Bytes
  • Size of remote file: 138 kB
interpro_domain/basic/plot_10.png ADDED

Git LFS Details

  • SHA256: c5206c551c7d7e5bfb159800d1bbba72cf6d68775791b0927197b5c1ce035568
  • Pointer size: 131 Bytes
  • Size of remote file: 142 kB
interpro_domain/basic/plot_11.png ADDED

Git LFS Details

  • SHA256: 094fddc3c99893d3facb9d95e4547a8d1681c16125b70d844e563eb8b178af63
  • Pointer size: 131 Bytes
  • Size of remote file: 137 kB
interpro_domain/basic/plot_12.png ADDED

Git LFS Details

  • SHA256: 0bdbc0f14c5dfb315c9b66eb8ce8b7906e1b69c784b1dd818dd1a2b9be7e20b4
  • Pointer size: 131 Bytes
  • Size of remote file: 132 kB
interpro_domain/basic/plot_2.png ADDED

Git LFS Details

  • SHA256: 2ffde9d63368908923b62cb4a04e705e7d19569eb04fc49be48fba95c137f826
  • Pointer size: 131 Bytes
  • Size of remote file: 131 kB
interpro_domain/basic/plot_3.png ADDED

Git LFS Details

  • SHA256: e2f0349c1c7b2c112cb2a1ed0e9ce6282abc38ee434a393fa047f13fd33130f8
  • Pointer size: 131 Bytes
  • Size of remote file: 135 kB
interpro_domain/basic/plot_4.png ADDED

Git LFS Details

  • SHA256: 276dc4fa450683742fb494379b319bd0802e931a94ba83f299975be80f7707cd
  • Pointer size: 131 Bytes
  • Size of remote file: 126 kB
interpro_domain/basic/plot_5.png ADDED

Git LFS Details

  • SHA256: f025bfdc08fb3a5b1aaa02e6a0a6876cf07b8d13b23dd97e025a7f8360d789cb
  • Pointer size: 131 Bytes
  • Size of remote file: 133 kB
interpro_domain/basic/plot_6.png ADDED

Git LFS Details

  • SHA256: db4e7ec5a007ce98e24791226aaf80f341fa2ba6ffdc0bc3716ea7ef0e3fe326
  • Pointer size: 131 Bytes
  • Size of remote file: 146 kB
interpro_domain/basic/plot_7.png ADDED

Git LFS Details

  • SHA256: b84eaaabb93df23c72d17e8578da62db34e821990891376f8df77c5e58927f8f
  • Pointer size: 131 Bytes
  • Size of remote file: 145 kB
interpro_domain/basic/plot_8.png ADDED

Git LFS Details

  • SHA256: 7605478882086fb3f556d5ab965b43578f859b7a63a2696772467c3b6022ebdf
  • Pointer size: 131 Bytes
  • Size of remote file: 123 kB
interpro_domain/basic/plot_9.png ADDED

Git LFS Details

  • SHA256: 0eed618c5f5a38c352b64e7ecc4bcf853900dd61adbfc867feb7985f3b68a11a
  • Pointer size: 131 Bytes
  • Size of remote file: 148 kB
interpro_domain/consensus.joblib ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d078cbbc55134615d454644b627ac90e58c91de5efbd231dbd5771110602a772
3
+ size 324612
interpro_domain/df_merge.tsv ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ term overlap setsize score pval overlap_mean setsize_mean score_mean pval_mean overlap_std setsize_std score_std pval_std pval_hit pval_50 pval_100 pval_250 pval_500
2
+ ABC transporter-like, ATP-binding domain [IPR003439] 1 9 2.323843242062234 0.0201338971824107 2.7694174757281553 10.218446601941748 0.3896442308636141 0.4819689640161482 2.0043003889175366 2.2319066503087304 0.948959154182388 0.2971074262916467 1.0 0.1114073342812727 0.0228441699597423 0.1139407547181512 0.3280048671308403
3
+ Major facilitator superfamily domain [IPR020846] 2 5 2.037358889163529 0.0416140904550896 1.8883495145631068 4.121359223300971 0.8776223597987594 0.2728824130413255 1.233496960525634 1.4580976091979958 1.2936014196902064 0.266909732326598 1.0 0.0004104233816526 0.0030667784637357 0.0352396407582777 0.0139902560164694
4
+ Cytochrome b5-like heme/steroid binding domain [IPR001199] 4 6 2.0187546364105065 0.043512728140556 2.813106796116505 6.104368932038835 1.6405397264547834 0.1100883340733615 1.2852875686886795 0.8042848477475721 1.100790504333474 0.1612592696854457 1.0 0.0573151884822011 0.0058956460302812 0.000142755965642 0.000160552482799
interpro_domain/metrics.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "type_of_task": "ranksum",
3
+ "signature_size": 2468,
4
+ "annotations_size": 2206,
5
+ "title": "Average number of proteins per term",
6
+ "value": 2.048050770625567
7
+ }
interpro_domain/paths.json ADDED
@@ -0,0 +1 @@
 
 
1
+ {"results_path": "results/proteins/hek293t_core/interpro_domain/fragment/C416/C416_val_log2fc"}
interpro_domain/result.tsv ADDED
@@ -0,0 +1,190 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Term es nes pval sidak fdr geneset_size leading_edge leading_edge_size
2
+ ABC transporter-like, ATP-binding domain [IPR003439] 0.7708754504518236 2.323843242062234 0.0201338971824107 1.0 0.1092463797041722 9 P08183 1
3
+ Major facilitator superfamily domain [IPR020846] 0.8616393999550902 2.037358889163529 0.0416140904550896 1.0 0.1541852872461955 5 P53985,Q6NT16 2
4
+ Alcohol dehydrogenase-like, C-terminal [IPR013149] 0.9007659938086564 2.026825404880969 0.0426802713753682 1.0 0.1541852872461955 4 Q8N4Q0 1
5
+ Cytochrome b5-like heme/steroid binding domain [IPR001199] 0.8353683087189621 2.0187546364105065 0.043512728140556 1.0 0.1553403019049003 6 O43169,O15173,Q9UMX5,Q8WUJ1 4
6
+ ABC transporter type 1, transmembrane domain [IPR011527] 0.8316796531496545 1.9135757165797531 0.0556743903120451 1.0 0.175105591334012 5 P08183 1
7
+ Peptidase M1, membrane alanine aminopeptidase [IPR014782] 0.8148377483240814 1.843376249766556 0.0652740952593302 1.0 0.1912279603480512 5 Q9UIQ6,P09960,P55786 3
8
+ Aminopeptidase N-like , N-terminal domain [IPR045357] 0.8148377483240814 1.843376249766556 0.0652740952593302 1.0 0.1912279603480512 5 Q9UIQ6,P09960,P55786 3
9
+ Importin-beta, N-terminal domain [IPR001494] 0.5936401624937865 1.7782650479800532 0.0753603339617972 1.0 0.2093764442313912 12 Q8TEX9,Q92973,O15397,O00410,Q9HAV4 5
10
+ Proteasome component (PCI) domain [IPR000717] 0.5290775220240687 1.760809611218454 0.078270632557525 1.0 0.2139591269168529 18 P61201,O00231,Q9BT78,Q15008,Q9Y262 5
11
+ Metaxin, glutathione S-transferase domain [IPR033468] 0.9229521492295192 1.749926359169475 0.0801310216132746 1.0 0.2153094198281168 2 Q13505 1
12
+ Mitochondrial outer membrane transport complex Sam37/metaxin, N-terminal domain [IPR019564] 0.9229521492295192 1.749926359169475 0.0801310216132746 1.0 0.2153094198281168 2 Q13505 1
13
+ TOG domain [IPR034085] 0.7579579814030148 1.6902071474748075 0.0909883314518689 1.0 0.2342023836001426 6 O75122,Q8TEX9,Q86Y56 3
14
+ Peptidase M16, C-terminal [IPR007863] 0.7076655253189938 1.6763467127639298 0.0936703000300827 1.0 0.23888633741776 7 Q5JRX3,P22695,Q10713 3
15
+ Peptidase M16, N-terminal [IPR011765] 0.7076655253189938 1.6763467127639298 0.0936703000300827 1.0 0.23888633741776 7 Q5JRX3,P22695,Q10713 3
16
+ Peptidase M3A/M3B catalytic domain [IPR001567] 0.8990267639902634 1.65072922132518 0.0987938782451913 1.0 0.2451510634520722 2 P52888 1
17
+ Fatty acid desaturase domain [IPR005804] 0.8840227088402257 1.588342565752377 0.1122088972012944 1.0 0.2641497769411032 2 O15121 1
18
+ Gelsolin-like domain [IPR007123] 0.7923158673694541 1.58786203995191 0.1123175388806685 1.0 0.2641497769411032 4 Q13045,Q15437 2
19
+ Sec23, C-terminal [IPR037550] 0.8783454987834542 1.5647092096333786 0.1176511080647395 1.0 0.2709168521824796 2 Q15437 1
20
+ TRAM/LAG1/CLN8 homology domain [IPR006634] 0.8965517241379292 1.5389338167988735 0.123820454413875 1.0 0.2806652192779296 3 Q96G23,Q96CP7 2
21
+ Alpha-L-fucosidase, C-terminal [IPR031919] 0.8718572587185698 1.537684880327172 0.1241256822665735 1.0 0.2808423129026268 2 Q9BTY2 1
22
+ Polyketide synthase, enoylreductase domain [IPR020843] 0.8927966120104505 1.524484868268561 0.1273876339862432 1.0 0.2858770300850992 3 Q8N4Q0 1
23
+ Reticulon [IPR003388] 0.8678021086780183 1.5207879736746814 0.1283130533584984 1.0 0.2868445236125382 2 O95197 1
24
+ MCM, AAA-lid domain [IPR041562] 0.7155600894998739 1.5065778110393766 0.1319189084879517 1.0 0.2918887784598009 6 P33993,P33991,Q14566,P49736 4
25
+ MCM OB domain [IPR033762] 0.7155600894998739 1.5065778110393766 0.1319189084879517 1.0 0.2918887784598009 6 P33993,P33991,Q14566,P49736 4
26
+ MCM domain [IPR001208] 0.7155600894998739 1.5065778110393766 0.1319189084879517 1.0 0.2918887784598009 6 P33993,P33991,Q14566,P49736 4
27
+ MCM N-terminal domain [IPR027925] 0.7155600894998739 1.5065778110393766 0.1319189084879517 1.0 0.2918887784598009 6 P33993,P33991,Q14566,P49736 4
28
+ Tubulin/FtsZ, GTPase domain [IPR003008] 0.7108042242079458 1.485851311494648 0.1373184544236685 1.0 0.2981662021730919 6 Q9BVA1,P04350,P07437,P68371,Q13885 5
29
+ Tubulin/FtsZ, 2-layer sandwich domain [IPR018316] 0.7108042242079458 1.485851311494648 0.1373184544236685 1.0 0.2981662021730919 6 Q9BVA1,P04350,P07437,P68371,Q13885 5
30
+ Zinc finger, C3HC4 RING-type [IPR018957] 0.8463098134630979 1.4311842249830913 0.1523774234288857 1.0 0.3183187462917821 2 Q5VTR2 1
31
+ ERAP1-like C-terminal domain [IPR024571] 0.8658651549434679 1.4207151834260676 0.1553995766535587 1.0 0.3227970965747219 3 P55786 1
32
+ DNA mismatch repair protein MutS, clamp [IPR007861] 0.842660178426601 1.4159660155801348 0.1567854548040352 1.0 0.324862627823776 2 P52701 1
33
+ Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain [IPR020058] 0.8611860986151245 1.4026694513560796 0.1607154309177494 1.0 0.3291905669494477 3 Q5JPH6 1
34
+ GOLD domain [IPR009038] 0.6485508366171919 1.4021678142620937 0.1608651403930343 1.0 0.3291915581697901 7 Q9Y3Q3,P49755,Q9Y3B3,Q9H3P7,Q15363 5
35
+ Sirtuin family, catalytic core domain [IPR026590] 0.8390105433901003 1.4007488965509047 0.1612891752459111 1.0 0.3297534018465987 2 Q8IXJ6 1
36
+ Aminoacyl-tRNA synthetase, class II [IPR006195] 0.544943161585132 1.374229923496056 0.1693703137275097 1.0 0.3402831621884213 11 P07814,O43776 2
37
+ Alcohol dehydrogenase, N-terminal [IPR013154] 0.8416617140699328 1.3273607625057562 0.184389372726895 1.0 0.3580659826016993 3 Q8N4Q0 1
38
+ Far upstream element-binding protein, C-terminal [IPR015096] 0.8122465531224625 1.2892634598143249 0.1973065096666204 1.0 0.3726525345244561 2 Q96AE4 1
39
+ PurM-like, N-terminal domain [IPR016188] 0.8081914030819118 1.2724004608737507 0.2032308704167871 1.0 0.3786548143069529 2 P49903 1
40
+ Ras GTPase-activating domain [IPR001936] 0.8266816536785525 1.2696134439985027 0.2042223581663496 1.0 0.3801810313206474 3 Q14C86 1
41
+ Sorting nexin Vps5-like, C-terminal [IPR015404] 0.8045417680454172 1.2572332249841358 0.2086691955892614 1.0 0.3852842591029092 2 Q9UNH7 1
42
+ Nucleoside diphosphate kinase-like domain [IPR034907] 0.7915652879156487 1.2033930397552268 0.228824260049258 1.0 0.4080730134750713 2 P22392 1
43
+ PurM-like, C-terminal domain [IPR010918] 0.8085192697768702 1.1997124131462027 0.2302510504297701 1.0 0.4099546547603493 3 P49903,O15067 2
44
+ W2 domain [IPR003307] 0.6017781241792857 1.1829949398753972 0.2368111528450494 1.0 0.4182589296846909 7 P55010 1
45
+ Rab-GTPase-TBC domain [IPR000195] 0.6931818181818283 1.17776888541726 0.2388887561097243 1.0 0.4202143257893205 4 O60343,Q8TC07,Q4KMP7 3
46
+ Beta-hexosaminidase, eukaryotic type, N-terminal [IPR029019] 0.7802108678021026 1.1564232310447098 0.2475080838542902 1.0 0.4312818585960223 2 P06865 1
47
+ Glycoside hydrolase family 20, catalytic domain [IPR015883] 0.7802108678021026 1.1564232310447098 0.2475080838542902 1.0 0.4312818585960223 2 P06865 1
48
+ Post-SET domain [IPR003616] 0.7781832927818261 1.1480522925534369 0.2509469770629517 1.0 0.4348696240383909 2 Q03164 1
49
+ Glutamine amidotransferase [IPR017926] 0.7887106176929377 1.1237267064849823 0.2611289830797794 1.0 0.4475917145874074 3 P17812 1
50
+ Lsm14-like, N-terminal [IPR025609] 0.7664233576642352 1.0996164228126402 0.2714992834024774 1.0 0.4593001680873199 2 Q96F86 1
51
+ DFDF domain [IPR025762] 0.7664233576642352 1.0996164228126402 0.2714992834024774 1.0 0.4593001680873199 2 Q96F86 1
52
+ FDF domain [IPR019050] 0.7664233576642352 1.0996164228126402 0.2714992834024774 1.0 0.4593001680873199 2 Q96F86 1
53
+ U2A'/phosphoprotein 32 family A, C-terminal [IPR003603] 0.669202326986912 1.0786787574355927 0.2807309585420015 1.0 0.4652836172379077 4 P39687,Q92688 2
54
+ Glycosyl transferase, family 1 [IPR001296] 0.7579075425790707 1.064682163079079 0.2870197844599771 1.0 0.4728645590132259 2 Q9BT22 1
55
+ Glutathione S-transferase, N-terminal [IPR004045] 0.6620020251544967 1.0490305760010623 0.2941640461283943 1.0 0.48104216883561 4 P21266 1
56
+ BRO1 domain [IPR004328] 0.7514193025141935 1.03815658272826 0.2991971622867977 1.0 0.4856725092013802 2 Q5VW32 1
57
+ HR1 rho-binding domain [IPR011072] 0.7497972424979676 1.0315385514472897 0.3022883394253144 1.0 0.4881966397315974 2 Q16513 1
58
+ Cold-shock (CSD) domain [IPR019844] 0.7469586374695834 1.0199705594397437 0.307742423550158 1.0 0.490165910723212 2 P67809 1
59
+ Cold shock domain [IPR011129] 0.7469586374695834 1.0199705594397437 0.307742423550158 1.0 0.490165910723212 2 P67809 1
60
+ Cold-shock protein, DNA-binding [IPR002059] 0.7469586374695834 1.0199705594397437 0.307742423550158 1.0 0.490165910723212 2 P67809 1
61
+ tRNA synthetases class I, catalytic domain [IPR032678] 0.7449310624493051 1.011718607153732 0.3116726161895902 1.0 0.4932207972125079 2 Q9HA77 1
62
+ Glutathione S-transferase, C-terminal [IPR004046] 0.5269074380651587 1.006448849251909 0.3141997053370731 1.0 0.4952497226094275 8 P07814,P21266 2
63
+ Heat shock chaperonin-binding [IPR006636] 0.7376317923763185 0.982091167783028 0.3260549362817113 1.0 0.503555495981994 2 P54727 1
64
+ Zinc finger, Sec23/Sec24-type [IPR006895] 0.7501683635300944 0.9771897316381768 0.3284752306065681 1.0 0.503555495981994 3 Q15437 1
65
+ Sec23/Sec24, helical domain [IPR006900] 0.7501683635300944 0.9771897316381768 0.3284752306065681 1.0 0.503555495981994 3 Q15437 1
66
+ Sec23/Sec24, trunk domain [IPR006896] 0.7501683635300944 0.9771897316381768 0.3284752306065681 1.0 0.503555495981994 3 Q15437 1
67
+ Sec23/Sec24 beta-sandwich [IPR012990] 0.7501683635300944 0.9771897316381768 0.3284752306065681 1.0 0.503555495981994 3 Q15437 1
68
+ FKBP-type peptidyl-prolyl cis-trans isomerase domain [IPR001179] 0.5193852549185971 0.9688446021748872 0.3326227290185293 1.0 0.5074629119884851 8 Q13451,Q96AY3,P62942,O00170 4
69
+ Zinc finger, CHHC-type [IPR012996] 0.7476673427991831 0.9677641153798666 0.3331621891772274 1.0 0.5079169242052272 3 P55795,P52597 2
70
+ Butyrophylin-like, SPRY domain [IPR003879] 0.746450304259627 0.963181918789264 0.3354562373150438 1.0 0.5083278364764399 3 P19474,Q14258 2
71
+ SPRY-associated [IPR006574] 0.746450304259627 0.963181918789264 0.3354562373150438 1.0 0.5083278364764399 3 P19474,Q14258 2
72
+ DNA mismatch repair protein MutS, C-terminal [IPR000432] 0.7447049889750553 0.956615969692863 0.3387611253030147 1.0 0.5111539277827979 3 P52701 1
73
+ DNA mismatch repair protein MutS-like, N-terminal [IPR007695] 0.7447049889750553 0.956615969692863 0.3387611253030147 1.0 0.5111539277827979 3 P52701 1
74
+ DNA mismatch repair protein MutS, core [IPR007696] 0.7447049889750553 0.956615969692863 0.3387611253030147 1.0 0.5111539277827979 3 P52701 1
75
+ DNA mismatch repair protein MutS, connector domain [IPR007860] 0.7447049889750553 0.956615969692863 0.3387611253030147 1.0 0.5111539277827979 3 P52701 1
76
+ Fibronectin type II domain [IPR000562] 0.7303325223033171 0.9525980052179136 0.3407937883157683 1.0 0.5135185088965745 2 P11717 1
77
+ EF-hand, Ca insensitive [IPR014837] 0.7399594320486769 0.9387952267603338 0.3478358900911209 1.0 0.5195165697637188 3 Q13813,O43707 2
78
+ Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) [IPR002314] 0.5844617176769777 0.9328777712030338 0.3508830806616614 1.0 0.5208937253967867 6 P07814 1
79
+ 14-3-3 domain [IPR023410] 0.582047116165706 0.9224241539676346 0.3563073755885364 1.0 0.5231542421878429 6 P27348,P62258,Q04917,P31946,P61981 5
80
+ Domain of unknown function DUF1747 [IPR013719] 0.7185725871857256 0.9053976474886832 0.3652547616029991 1.0 0.5257200670723075 2 Q08945 1
81
+ Intermediate filament head, DNA-binding domain [IPR006821] 0.7302963375399318 0.9026642123526816 0.3667041356030776 1.0 0.5257200670723075 3 P08670 1
82
+ Ubiquitin-conjugating enzyme E2 [IPR000608] 0.5044693032625807 0.894622914045746 0.3709886985600583 1.0 0.5283631256093758 8 Q16763,Q9NR09 2
83
+ P-type ATPase, haloacid dehalogenase domain [IPR044492] 0.5359380399696646 0.8760598734170293 0.3809974854157616 1.0 0.5356790648994073 7 P23634,Q9HD20 2
84
+ Proteasome activator PA28, N-terminal domain [IPR003185] 0.7204193595335402 0.865973110152078 0.3865049080721854 1.0 0.5402037450303799 3 Q9UL46 1
85
+ Proteasome activator PA28, C-terminal domain [IPR003186] 0.7204193595335402 0.865973110152078 0.3865049080721854 1.0 0.5402037450303799 3 Q9UL46 1
86
+ Fragile X-related 1 protein, C-terminal region 1 [IPR032172] 0.7072181670721744 0.8602442442071184 0.3896544203236591 1.0 0.5423202846902159 2 P51116 1
87
+ Agenet-like domain [IPR008395] 0.7072181670721744 0.8602442442071184 0.3896544203236591 1.0 0.5423202846902159 2 P51116 1
88
+ Fragile X-related 1 protein, C-terminal core [IPR022034] 0.7072181670721744 0.8602442442071184 0.3896544203236591 1.0 0.5423202846902159 2 P51116 1
89
+ Fxr1, tudor domain [IPR041560] 0.7072181670721744 0.8602442442071184 0.3896544203236591 1.0 0.5423202846902159 2 P51116 1
90
+ Synaptic functional regulator FMRP, KH0 domain [IPR040472] 0.7072181670721744 0.8602442442071184 0.3896544203236591 1.0 0.5423202846902159 2 P51116 1
91
+ EB1, C-terminal [IPR004953] 0.7039740470397324 0.8474270114371397 0.3967571539555286 1.0 0.5498969223315685 2 Q15691 1
92
+ Exportin-2, central domain [IPR013713] 0.705734539811854 0.8119340224700135 0.4168294908313676 1.0 0.5658620657070751 3 O15397 1
93
+ PTB/PI domain [IPR006020] 0.6926196269261972 0.8028892545714826 0.4220387473436469 1.0 0.5680399491397901 2 O60343 1
94
+ Kinesin-like [IPR022164] 0.6926196269261912 0.8028892545714584 0.4220387473436608 1.0 0.5680399491397901 2 Q12756 1
95
+ RBM3/CIRBP, RNA recognition motif [IPR034278] 0.6914030819140267 0.7981488371285329 0.424784123611968 1.0 0.5696232421195156 2 Q14011 1
96
+ Ubiquitin specific protease domain [IPR028889] 0.484346268224431 0.7955155356003297 0.426313677579021 1.0 0.5696232421195156 8 Q86UV5,Q9UPU5 2
97
+ Peptidase C19, ubiquitin carboxyl-terminal hydrolase [IPR001394] 0.484346268224431 0.7955155356003297 0.426313677579021 1.0 0.5696232421195156 8 Q86UV5,Q9UPU5 2
98
+ MIT domain [IPR007330] 0.6992706142950811 0.7883649198470861 0.4304832840639641 1.0 0.5734014151604683 3 Q8N0X7 1
99
+ Immunoglobulin-like domain [IPR007110] 0.4809013515542681 0.7787017884160107 0.4361554023712852 1.0 0.5785681404877061 8 Q9BY67,P10321,P35613 3
100
+ Condensin complex subunit 1, C-terminal [IPR032682] 0.6841038118410379 0.7698434132100702 0.4413927839260294 1.0 0.5823768479323815 2 P42695 1
101
+ Serine-tRNA ligase catalytic core domain [IPR033729] 0.6808596918085874 0.7573417191870935 0.4488451627424075 1.0 0.5833234298458917 2 P49591 1
102
+ SUN coiled coil domain 2 [IPR040994] 0.6804541768045345 0.7557825293008008 0.4497795931386967 1.0 0.5837681972775013 2 O94901 1
103
+ Survival motor neuron [IPR010304] 0.6768045417680435 0.7417858918346985 0.4582170697487231 1.0 0.5890599393156661 2 Q16637 1
104
+ K Homology domain, type 1 [IPR004088] 0.3715441617461953 0.7372879462787104 0.4609472607961877 1.0 0.5910551023292308 20 Q96AE4,Q9NQT5,Q9Y6M1,P51116,Q92945,P61978,Q15365,Q96PU8 8
105
+ SUN domain [IPR012919] 0.6807302231237257 0.7216099387691015 0.4705343269085222 1.0 0.5973115782909573 3 O94901,Q9ULT8 2
106
+ Ku70/Ku80 beta-barrel domain [IPR006164] 0.6650446066504452 0.697150476274795 0.4857086280022171 1.0 0.6063798717447035 2 P13010 1
107
+ Ku70/Ku80 C-terminal arm [IPR005160] 0.6650446066504452 0.697150476274795 0.4857086280022171 1.0 0.6063798717447035 2 P13010 1
108
+ Ku70/Ku80, N-terminal alpha/beta [IPR005161] 0.6650446066504452 0.697150476274795 0.4857086280022171 1.0 0.6063798717447035 2 P13010 1
109
+ Myosin tail [IPR002928] 0.6718052738336645 0.6899769105571345 0.4902087075678434 1.0 0.6092396669829084 3 P35580,P35579 2
110
+ Exportin-1/Importin-beta-like [IPR013598] 0.6528791565287897 0.6517897343233754 0.5145368249760613 1.0 0.6288466680870867 2 Q9HAV4 1
111
+ Cyclic nucleotide-binding domain [IPR000595] 0.6598674371246507 0.6482409767932287 0.5168291025883724 1.0 0.6298150783768145 3 P10644 1
112
+ CAP Gly-rich domain [IPR000938] 0.6592292089249419 0.6460294432158346 0.5182602875422198 1.0 0.6305617191481243 3 Q15813,Q14203 2
113
+ cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain [IPR003117] 0.6508515815085096 0.6443165403502611 0.5193701920635276 1.0 0.6305617191481243 2 P10644 1
114
+ Immunoglobulin V-set domain [IPR013106] 0.6577302975475072 0.6408437661636978 0.5216241944572397 1.0 0.632601964251056 3 Q9BY67 1
115
+ FKBP3, basic tilted helix bundle domain [IPR041200] 0.6411192214111896 0.6088155540590425 0.5426467026635255 1.0 0.6499926781275375 2 Q9ULT8 1
116
+ Zinc finger, RanBP2-type [IPR001876] 0.4443895424831635 0.604398909037873 0.5455784609178715 1.0 0.6512695263987146 8 P98175,O95218,Q92804 3
117
+ RING-type zinc-finger, LisH dimerisation motif [IPR027370] 0.62935928629359 0.5667915974500288 0.5708557799995986 1.0 0.6652626380530351 2 O15344 1
118
+ JmjC domain [IPR003347] 0.5111399692773535 0.5642607260628751 0.5725767054716178 1.0 0.6656401263970476 5 Q9H6W3 1
119
+ SPRY domain [IPR003877] 0.4345178597780995 0.5588462276529867 0.5762666702164012 1.0 0.6665573440517364 8 O15344,P19474,Q14258,Q92499 4
120
+ B30.2/SPRY domain [IPR001870] 0.4345178597780995 0.5588462276529867 0.5762666702164012 1.0 0.6665573440517364 8 O15344,P19474,Q14258,Q92499 4
121
+ Zinc finger, CW-type [IPR011124] 0.6257096512570908 0.5539573745150973 0.5796080178927396 1.0 0.6683822725935095 2 Q8NB78 1
122
+ Domain of unknown function DUF4749 [IPR031847] 0.6232765612327626 0.5454584396165998 0.5854382569557899 1.0 0.6715947971110101 2 Q96HC4 1
123
+ Immunoglobulin subtype 2 [IPR003598] 0.4988819058252806 0.5176977381494748 0.604669176612769 1.0 0.6840513864655222 5 Q9BY67,P35613 2
124
+ PIN domain [IPR002716] 0.6119221411192168 0.5064288213958879 0.612555645943144 1.0 0.6894376300768243 2 Q9Y2L1 1
125
+ PPM-type phosphatase domain [IPR001932] 0.6171527066276228 0.5054021773890888 0.6132763898511415 1.0 0.6898968465128089 3 O15355 1
126
+ Immunoglobulin subtype [IPR003599] 0.4711658649928862 0.4672362154208734 0.6403308857683223 1.0 0.7153331999025246 6 Q9BY67,P35613 2
127
+ 4Fe-4S ferredoxin-type, iron-sulphur binding domain [IPR017896] 0.598782961460437 0.447747941585889 0.6543351178677959 1.0 0.7271855264566034 3 Q16134,P21912 2
128
+ Dynamin, GTPase domain [IPR001401] 0.594173260540533 0.433694600595095 0.6645102280274804 1.0 0.73714896706586 3 O00429 1
129
+ Proteasomal ATPase OB C-terminal domain [IPR032501] 0.4754364596021183 0.4320843297099832 0.6656801234139131 1.0 0.7371939519332793 5 P62333,P17980,P43686,P62191 4
130
+ GTP binding protein, second domain [IPR031662] 0.5835360908353562 0.4138854176155845 0.678958023852194 1.0 0.7492653329754576 2 P55039 1
131
+ Pleckstrin homology domain, spectrin-type [IPR001605] 0.5819140308191355 0.4088345383206088 0.6826610915900659 1.0 0.7525988845815519 2 O15020 1
132
+ Pleckstrin homology domain 9 [IPR041681] 0.5819140308191355 0.4088345383206088 0.6826610915900659 1.0 0.7525988845815519 2 O15020 1
133
+ Glutamine amidotransferase type 2 domain [IPR017932] 0.5833671399594231 0.401450392460373 0.6880885545069277 1.0 0.7564585357832985 3 P08243,Q06210 2
134
+ LIS1 homology motif [IPR006594] 0.3986239904247183 0.401272471281743 0.6882195291555213 1.0 0.7564585357832985 8 O95684 1
135
+ Elongation factor 1 beta central acidic region, eukaryote [IPR018940] 0.5774533657745308 0.3950862568984319 0.6927792309821594 1.0 0.7595780236315327 2 P24534 1
136
+ Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain [IPR014038] 0.5774533657745308 0.3950862568984319 0.6927792309821594 1.0 0.7595780236315327 2 P24534 1
137
+ Methylglyoxal synthase-like domain [IPR011607] 0.5754257907542527 0.3889067607434268 0.6973451207648731 1.0 0.7634458245197568 2 P31939 1
138
+ Poly(ADP-ribose) polymerase, catalytic domain [IPR012317] 0.5738037307380326 0.3839950085684371 0.7009821470231095 1.0 0.7670469327048509 2 P09874 1
139
+ Pleckstrin homology domain [IPR001849] 0.3332896948606818 0.3765604685462014 0.7065002702625005 1.0 0.7715542555440971 16 Q6WCQ1,O14654,Q8IYI6,Q12756,Q9BZF1 5
140
+ SET domain [IPR001214] 0.4835187954574413 0.3732779296422249 0.7089416009091309 1.0 0.77345458536377 4 Q03164 1
141
+ ENTH domain [IPR013809] 0.5681265206812597 0.3670305276698794 0.7135962469079895 1.0 0.777763498359202 2 Q14677 1
142
+ Glutathione S-transferase, C-terminal-like [IPR010987] 0.4101303451206798 0.3418497961472858 0.7324639327085551 1.0 0.7963604906629239 7 P21266 1
143
+ ABC-transporter extension domain [IPR032781] 0.5551500405514941 0.3296249110461799 0.7416833973744266 1.0 0.8028614951959235 2 Q9NUQ8 1
144
+ Ribose-phosphate pyrophosphokinase, N-terminal domain [IPR029099] 0.5521298174442081 0.3142771152281 0.7533105777294302 1.0 0.8126111487998698 3 O60256,Q14558 2
145
+ La-type HTH domain [IPR006630] 0.4377290723558176 0.3060935921422968 0.7595333866613072 1.0 0.8169335207093338 5 Q92615,P05455,Q71RC2 3
146
+ CSN8/PSMD8/EIF3K [IPR033464] 0.5476673427991774 0.3026167038088642 0.7621819832194152 1.0 0.8185849342658373 3 Q9UBQ5,Q99627 2
147
+ Zinc finger, LIM-type [IPR001781] 0.3986184477854579 0.3005976847243891 0.7637212971766647 1.0 0.8189213549078889 7 O00151,Q13642,Q16527,Q14847,Q9UHB6,Q96HC4 6
148
+ L27 domain [IPR004172] 0.5417680454176738 0.2931493089951442 0.7694080283033577 1.0 0.8227407224610795 2 Q9NZW5 1
149
+ L27 domain, C-terminal [IPR014775] 0.5417680454176738 0.2931493089951442 0.7694080283033577 1.0 0.8227407224610795 2 Q9NZW5 1
150
+ Ubiquitin-like domain [IPR000626] 0.3489632113777517 0.2693389901286012 0.7876688305816353 1.0 0.8386088032157758 10 Q15813,Q86UV5,P46379 3
151
+ K Homology domain [IPR004087] 0.2989767736661198 0.260516114922528 0.7944656864399626 1.0 0.8442154644925615 20 Q96AE4,Q9Y6M1,P51116,Q92945,P61978,Q15365,Q96PU8 7
152
+ Myosin, N-terminal, SH3-like [IPR004009] 0.4125050751116608 0.2316834118618794 0.8167839162821406 1.0 0.8645994814387726 5 P35580,P35579,Q9Y4I1,Q7Z406 4
153
+ Bromo adjacent homology (BAH) domain [IPR001025] 0.4241071428571386 0.2054976007946603 0.8371833723903972 1.0 0.8811195226589772 4 O94776,P26358,Q86U86 3
154
+ Phox homology [IPR001683] 0.415549068836026 0.1851996550397767 0.8530724396502212 1.0 0.894853923855629 4 Q9UNH7 1
155
+ Initiation factor eIF-4 gamma, MA3 [IPR003891] 0.407873376623374 0.1679020547420781 0.8666603336281027 1.0 0.907381440903462 4 P78344,Q5C9Z4,Q04637 3
156
+ CoA-binding [IPR003781] 0.4756690997566854 0.1476393209582667 0.8826274214993435 1.0 0.921038832463364 2 P53396 1
157
+ 3-hydroxyacyl-CoA dehydrogenase, C-terminal [IPR006108] 0.4740470397404629 0.1448311201194591 0.8848442109668353 1.0 0.9224793617168424 2 Q16836 1
158
+ 3-hydroxyacyl-CoA dehydrogenase, NAD binding [IPR006176] 0.4740470397404629 0.1448311201194591 0.8848442109668353 1.0 0.9224793617168424 2 Q16836 1
159
+ EF-hand domain [IPR002048] 0.2542343256470268 0.1372522005576278 0.8908314512071684 1.0 0.9274064093265756 33 P80303,Q02818,O43852,Q14257,Q9BPX6 5
160
+ Zinc finger, PARP-type [IPR001510] 0.4626926196269214 0.1262067207102521 0.8995682915496228 1.0 0.9345054650478704 2 P09874 1
161
+ Dynamin, N-terminal [IPR045063] 0.3605252905829434 0.1259536243633915 0.8997686345247855 1.0 0.9345054650478704 6 O00429 1
162
+ Dynamin-type guanine nucleotide-binding (G) domain [IPR030381] 0.3605252905829434 0.1259536243633915 0.8997686345247855 1.0 0.9345054650478704 6 O00429 1
163
+ MPN domain [IPR037518] 0.3200747288356425 0.1239415474349908 0.9013615564490892 1.0 0.935279206738801 8 O15372,P51665,Q92905 3
164
+ JAB1/MPN/MOV34 metalloenzyme domain [IPR000555] 0.3397221355168444 0.1230953962702584 0.9020315568005112 1.0 0.9355343743779632 7 O15372,P51665,Q92905 3
165
+ RecF/RecN/SMC, N-terminal [IPR003395] 0.3562144597887924 0.1163886487138216 0.9073445312672967 1.0 0.9401606556954704 6 Q9NTJ3,Q96SB8,Q9UQE7,Q8IY18,O95347 5
166
+ SH3 domain [IPR001452] 0.258472494666821 0.1134148869199026 0.9097016378068334 1.0 0.9417183542946383 26 Q9UQB8,Q00013 2
167
+ TRIAD supradomain [IPR044066] 0.4480940794809409 0.1048852696872906 0.9164668475794616 1.0 0.946096600701668 2 Q9Y4X5 1
168
+ Ariadne domain [IPR045840] 0.4480940794809409 0.1048852696872906 0.9164668475794616 1.0 0.946096600701668 2 Q9Y4X5 1
169
+ IBR domain [IPR002867] 0.4480940794809409 0.1048852696872906 0.9164668475794616 1.0 0.946096600701668 2 Q9Y4X5 1
170
+ Cation-transporting P-type ATPase, N-terminal [IPR004014] 0.357934613018318 0.1035250890165366 0.9175462383153006 1.0 0.946096600701668 5 P23634 1
171
+ Cation-transporting P-type ATPase, C-terminal [IPR006068] 0.357934613018318 0.1035250890165366 0.9175462383153006 1.0 0.946096600701668 5 P23634 1
172
+ ERM family, FERM domain C-lobe [IPR041789] 0.4470588235294019 0.1012302030823945 0.9193677212696456 1.0 0.946837158319719 3 P15311,P35241 2
173
+ Importin-alpha, importin-beta-binding domain [IPR002652] 0.3536271309046286 0.0954741517897048 0.9239382203411222 1.0 0.9495169938495178 5 O60684,O00629,P52292 3
174
+ MIF4G-like, type 3 [IPR003890] 0.3440292445166569 0.0910958495182627 0.9274164305367822 1.0 0.9520151911419924 6 P78344,Q9H074,Q5C9Z4,Q04637,O43432 5
175
+ Nucleoporin, Nup133/Nup155-like, C-terminal [IPR007187] 0.4334955393349515 0.0864309845383037 0.9311238169827608 1.0 0.9553763443088232 2 Q8WUM0 1
176
+ Metallo-beta-lactamase [IPR001279] 0.4270072992700713 0.0791155686519196 0.9369407003357026 1.0 0.9591322797619868 2 Q9UKF6 1
177
+ Heterogeneous nuclear ribonucleoprotein Q acidic domain [IPR041337] 0.4225466342254646 0.0743919968740628 0.9406984767285832 1.0 0.962068075875408 2 O60506 1
178
+ FYVE zinc finger [IPR000306] 0.4245934361363774 0.0731723257795535 0.9416689881671104 1.0 0.9621684983310076 3 O14964 1
179
+ Zinc finger, FYVE-related [IPR017455] 0.4245934361363774 0.0731723257795535 0.9416689881671104 1.0 0.9621684983310076 3 O14964 1
180
+ High mobility group box domain [IPR009071] 0.2817864305407382 0.0590468487050836 0.9529147933095604 1.0 0.9732083490930046 11 P09429,P26583,O96028 3
181
+ Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain [IPR044861] 0.4026763990267653 0.0562254769963508 0.9551621855535284 1.0 0.975052189417438 2 O00469 1
182
+ Translation elongation factor EFTu/EF1A, C-terminal [IPR004160] 0.3279016947562146 0.0401610057676156 0.967964765422165 1.0 0.9860075115538603 4 P15170,Q9Y450 2
183
+ SH2 domain [IPR000980] 0.2997737222973264 0.0399551758723193 0.968128862205649 1.0 0.9860075115538603 7 Q06124,P40763 2
184
+ CTLH, C-terminal LisH motif [IPR006595] 0.3584752635847551 0.0302773797401559 0.975845836653128 1.0 0.99157803577006 2 Q96S59 1
185
+ TGS [IPR004095] 0.3034498114535234 0.0254299276721059 0.9797120399921164 1.0 0.9945479207303132 6 P55039,Q9NTK5,P26639 3
186
+ BZW1/2, W2 domain [IPR043510] 0.3365774533657763 0.0231174136978935 0.9815566152757302 1.0 0.9955466176083958 2 Q9Y6E2 1
187
+ La protein, xRRM domain [IPR014886] 0.3304947283049512 0.0216274720900464 0.9827451190953508 1.0 0.9962939948181728 2 P05455 1
188
+ ZU5 domain [IPR000906] 0.322789943227904 0.020001844875963 0.9840419008625458 1.0 0.997150405743122 2 Q07157 1
189
+ Vps4 oligomerisation, C-terminal [IPR015415] 0.3022312373225064 0.0053286004780335 0.995748412067819 1.0 1.0 3 Q9UN37,O75351 2
190
+ Replication factor C, C-terminal [IPR013748] 0.2774847870182463 0.0023295570562587 0.9981412840724596 1.0 1.0 3 P40937,P35250 2