The full dataset viewer is not available (click to read why). Only showing a preview of the rows.
The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError
Exception: DatasetGenerationCastError
Message: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 4 new columns ({'pval', 'overlap', 'score', 'setsize'}) and 8 missing columns ({'pval_mean', 'overlap_std', 'setsize_std', 'score_std', 'pval_std', 'setsize_mean', 'score_mean', 'overlap_mean'}).
This happened while the csv dataset builder was generating data using
hf://datasets/ligdis/interpro_domain/fragment/C001/C001_val_log2fc/harmon.tsv (at revision 1735edb3fd355c103078773567d55747985e9958)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1870, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 622, in write_table
pa_table = table_cast(pa_table, self._schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2292, in table_cast
return cast_table_to_schema(table, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2240, in cast_table_to_schema
raise CastError(
datasets.table.CastError: Couldn't cast
term: string
overlap: int64
setsize: int64
score: double
pval: double
-- schema metadata --
pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 812
to
{'term': Value(dtype='string', id=None), 'overlap_mean': Value(dtype='float64', id=None), 'setsize_mean': Value(dtype='float64', id=None), 'score_mean': Value(dtype='float64', id=None), 'pval_mean': Value(dtype='float64', id=None), 'overlap_std': Value(dtype='float64', id=None), 'setsize_std': Value(dtype='float64', id=None), 'score_std': Value(dtype='float64', id=None), 'pval_std': Value(dtype='float64', id=None)}
because column names don't match
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1420, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1052, in convert_to_parquet
builder.download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 924, in download_and_prepare
self._download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1000, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1741, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1872, in _prepare_split_single
raise DatasetGenerationCastError.from_cast_error(
datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 4 new columns ({'pval', 'overlap', 'score', 'setsize'}) and 8 missing columns ({'pval_mean', 'overlap_std', 'setsize_std', 'score_std', 'pval_std', 'setsize_mean', 'score_mean', 'overlap_mean'}).
This happened while the csv dataset builder was generating data using
hf://datasets/ligdis/interpro_domain/fragment/C001/C001_val_log2fc/harmon.tsv (at revision 1735edb3fd355c103078773567d55747985e9958)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
term
string | overlap_mean
float64 | setsize_mean
float64 | score_mean
float64 | pval_mean
float64 | overlap_std
float64 | setsize_std
float64 | score_std
float64 | pval_std
float64 |
|---|---|---|---|---|---|---|---|---|
1-acyl-sn-glycerol-3-phosphate acyltransferase [IPR004552]
| 0.605333
| 1.018667
| -0.471986
| 0.21719
| 0.488779
| 0.135345
| 1.934706
| 0.260947
|
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3, EF hand domain [IPR039504]
| 0.8
| 1
| -1.225925
| 0.24791
| 0.4
| 0
| 1.957516
| 0.298316
|
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1, SH3 domain [IPR035724]
| 0.577031
| 1
| -0.439845
| 0.274911
| 0.494031
| 0
| 1.826481
| 0.282216
|
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2, SH3 domain [IPR035723]
| 0.565217
| 1
| -0.359058
| 0.354197
| 0.495728
| 0
| 1.623524
| 0.334607
|
1-phosphatidylinositol-3-phosphate 5-kinase, PIPK catalytic domain [IPR044769]
| 0.166667
| 1
| 1.310343
| 0.282718
| 0.372678
| 0
| 1.014056
| 0.249827
|
10TM putative phosphate transporter, cytosolic domain [IPR027815]
| 0.714286
| 1
| -1.39079
| 0.203467
| 0.451754
| 0
| 1.720443
| 0.267048
|
116kDa U5 small nuclear ribonucleoprotein component, C-terminal [IPR035655]
| 0.924757
| 1
| -1.392233
| 0.264782
| 0.263783
| 0
| 1.06635
| 0.256985
|
116kDa U5 small nuclear ribonucleoprotein component, N-terminal [IPR031950]
| 0.924757
| 1
| -1.392233
| 0.264782
| 0.263783
| 0
| 1.06635
| 0.256985
|
14-3-3 domain [IPR023410]
| 4.368932
| 6
| -0.059264
| 0.462656
| 1.377632
| 0.184338
| 1.087124
| 0.305071
|
16S/18S rRNA aminocarboxypropyltransferase Tsr3, C-terminal [IPR007177]
| 0.428571
| 1
| 0.273402
| 0.320059
| 0.494872
| 0
| 1.672066
| 0.313555
|
18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23, C-terminal [IPR022238]
| 0.496
| 1
| 0.06558
| 0.327551
| 0.499984
| 0
| 1.661584
| 0.293671
|
2'-5'-oligoadenylate synthetase 1, domain 2/C-terminal [IPR018952]
| 1
| 1
| -1.166415
| 0.282292
| 0
| 0
| 0.411058
| 0.168181
|
2-5OAS/ClassI-CCAase, nucleotidyltransferase domain [IPR006116]
| 1
| 1
| -1.166415
| 0.282292
| 0
| 0
| 0.411058
| 0.168181
|
2-oxoacid dehydrogenase acyltransferase, catalytic domain [IPR001078]
| 2.257282
| 3.470874
| -0.84423
| 0.4053
| 1.106828
| 0.658497
| 0.93741
| 0.309583
|
2-oxoglutarate dehydrogenase E1 component, N-terminal domain [IPR032106]
| 0.768293
| 1
| -1.01592
| 0.254725
| 0.421923
| 0
| 1.526307
| 0.26409
|
26S proteasome non-ATPase regulatory subunit RPN1, C-terminal [IPR041433]
| 0.645631
| 1
| -0.41244
| 0.339824
| 0.478322
| 0
| 1.538701
| 0.301814
|
26S proteasome regulatory subunit RPN2, C-terminal [IPR040623]
| 0.679612
| 1
| -0.633432
| 0.326923
| 0.466626
| 0
| 1.462174
| 0.283044
|
26S proteasome regulatory subunit RPN5, C-terminal domain [IPR040896]
| 0.856796
| 1
| -1.626811
| 0.172531
| 0.350281
| 0
| 1.522021
| 0.244988
|
26S proteasome regulatory subunit Rpn6, N-terminal [IPR040773]
| 0.15534
| 1
| 1.40542
| 0.179025
| 0.362228
| 0
| 1.473018
| 0.216576
|
26S proteasome regulatory subunit Rpn7, N-terminal [IPR045135]
| 1.104369
| 1.98301
| -0.133898
| 0.612637
| 0.672829
| 0.129235
| 0.975771
| 0.323371
|
26S proteasome regulatory subunit, C-terminal [IPR013586]
| 0.216019
| 1
| 0.967895
| 0.315093
| 0.411528
| 0
| 1.354701
| 0.275854
|
2Fe-2S ferredoxin-type iron-sulfur binding domain [IPR001041]
| 0.907767
| 2.01699
| -0.398079
| 0.571551
| 0.62414
| 0.129235
| 0.999885
| 0.329312
|
3'-5' exonuclease domain [IPR002562]
| 1.325243
| 2.140777
| -0.43246
| 0.581174
| 0.718036
| 0.561367
| 0.975361
| 0.322813
|
3'5'-cyclic nucleotide phosphodiesterase, catalytic domain [IPR002073]
| 0.482759
| 1
| 0.448279
| 0.08011
| 0.499703
| 0
| 2.514968
| 0.176985
|
3-beta hydroxysteroid dehydrogenase/isomerase [IPR002225]
| 0.650485
| 1
| -0.575457
| 0.249042
| 0.476817
| 0
| 1.841891
| 0.26759
|
3-hydroxyacyl-CoA dehydrogenase, C-terminal [IPR006108]
| 0.990291
| 2.415049
| 0.337153
| 0.518437
| 0.806468
| 0.49273
| 1.116921
| 0.329822
|
3-hydroxyacyl-CoA dehydrogenase, NAD binding [IPR006176]
| 0.990291
| 2.415049
| 0.337153
| 0.518437
| 0.806468
| 0.49273
| 1.116921
| 0.329822
|
3-hydroxyisobutyrate dehydrogenase, NAD-binding domain [IPR029154]
| 1.506083
| 1.963504
| -0.874048
| 0.440833
| 0.621463
| 0.187522
| 1.090667
| 0.316786
|
3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal [IPR001104]
| 0.442822
| 1
| 0.309806
| 0.158685
| 0.49672
| 0
| 2.244809
| 0.244685
|
3-oxoacid CoA-transferase, subunit A [IPR012792]
| 0.770408
| 1
| -1.280804
| 0.173199
| 0.42057
| 0
| 1.902844
| 0.249781
|
3-oxoacid CoA-transferase, subunit B [IPR012791]
| 0.770408
| 1
| -1.280804
| 0.173199
| 0.42057
| 0
| 1.902844
| 0.249781
|
4'-phosphopantetheinyl transferase domain [IPR008278]
| 0.101942
| 1
| 1.421398
| 0.219966
| 0.302572
| 0
| 1.340484
| 0.248926
|
40S ribosomal protein S11, N-terminal [IPR032440]
| 0.779126
| 1
| -1.136676
| 0.198989
| 0.414836
| 0
| 1.647359
| 0.241767
|
40S ribosomal protein S4, C-terminal domain [IPR032277]
| 0.645631
| 1
| -0.523786
| 0.304167
| 0.478322
| 0
| 1.567894
| 0.284482
|
40S ribosomal protein SA, C-terminal domain [IPR032281]
| 0.631068
| 1
| -0.451099
| 0.33973
| 0.482515
| 0
| 1.564204
| 0.302227
|
4Fe-4S ferredoxin-type, iron-sulphur binding domain [IPR017896]
| 1.291262
| 3.61165
| 0.19748
| 0.598414
| 0.933529
| 0.487375
| 0.822476
| 0.294842
|
5'-3' exoribonuclease 1, SH3-like domain [IPR041385]
| 0.453125
| 1
| 0.022063
| 0.224884
| 0.497798
| 0
| 1.868835
| 0.239141
|
5'-AMP-activated protein kinase alpha 1 catalytic subunit, C-terminal [IPR039137]
| 0.407407
| 1
| 0.437383
| 0.267615
| 0.491352
| 0
| 1.767663
| 0.268246
|
5'-AMP-activated protein kinase catalytic subunit alpha-2, C-terminal [IPR039148]
| 0.234234
| 1
| 0.920584
| 0.241419
| 0.423519
| 0
| 1.663961
| 0.262371
|
5-aminolevulinate synthase presequence [IPR015118]
| 0.833333
| 1
| -0.351616
| 0.461609
| 0.372678
| 0
| 1.235451
| 0.349434
|
6-phosphogluconate dehydrogenase, C-terminal [IPR006114]
| 0.762136
| 1
| -0.998784
| 0.262901
| 0.425775
| 0
| 1.611888
| 0.283444
|
6-phosphogluconate dehydrogenase, NADP-binding [IPR006115]
| 2.046117
| 2.958738
| -0.835663
| 0.453545
| 0.884225
| 0.210746
| 0.809242
| 0.291653
|
6-phosphogluconolactonase, DevB-type [IPR005900]
| 0.584951
| 1
| -0.230437
| 0.312412
| 0.49273
| 0
| 1.667831
| 0.285779
|
60S ribosomal protein L10P, insertion domain [IPR040637]
| 1.291262
| 2
| -0.79464
| 0.461949
| 0.589241
| 0
| 1.081506
| 0.319595
|
60S ribosomal protein L4, C-terminal domain [IPR025755]
| 0.589806
| 1
| -0.373563
| 0.247709
| 0.491869
| 0
| 1.884905
| 0.276838
|
6S proteasome subunit Rpn6, C-terminal helix domain [IPR040780]
| 0.15534
| 1
| 1.40542
| 0.179025
| 0.362228
| 0
| 1.473018
| 0.216576
|
A kinase-anchoring protein AKAP5 and AKAP12, calmodulin (CaM)-binding motif [IPR001573]
| 0.761421
| 1.015228
| -1.337874
| 0.144852
| 0.449403
| 0.12246
| 1.934216
| 0.226136
|
A-kinase anchor protein 10, PKA-binding (AKB) domain [IPR037719]
| 0.255814
| 1
| 0.787972
| 0.155187
| 0.436318
| 0
| 1.979982
| 0.207762
|
A-kinase anchor protein 2, C-terminal domain [IPR029304]
| 0.6
| 1
| -0.343344
| 0.679225
| 0.489898
| 0
| 0.57387
| 0.269398
|
AAA ATPase, AAA+ lid domain [IPR041569]
| 7.885922
| 16.485437
| -0.544569
| 0.564807
| 3.793722
| 1.438811
| 0.681107
| 0.30358
|
AAA C-terminal domain [IPR032423]
| 0.514851
| 1
| -0.11241
| 0.180174
| 0.499779
| 0
| 2.23584
| 0.243023
|
AAA lid domain [IPR041083]
| 0.65812
| 1.196581
| -0.259363
| 0.362055
| 0.587074
| 0.397413
| 1.448099
| 0.310661
|
AAA+ ATPase domain [IPR003593]
| 15.315534
| 53.915049
| -0.301483
| 0.710119
| 8.06692
| 5.471468
| 0.56794
| 0.283856
|
AAR2, C-terminal [IPR033648]
| 0.245431
| 1
| 0.972882
| 0.251252
| 0.430342
| 0
| 1.611407
| 0.263186
|
AAR2, N-terminal [IPR033647]
| 0.245431
| 1
| 0.972882
| 0.251252
| 0.430342
| 0
| 1.611407
| 0.263186
|
AARP2CN [IPR012948]
| 1.087379
| 1.985437
| -0.185618
| 0.596135
| 0.677041
| 0.119796
| 1.062813
| 0.327611
|
AATF leucine zipper-containing domain [IPR025160]
| 0.612346
| 1
| -0.397547
| 0.277704
| 0.487215
| 0
| 1.75426
| 0.280797
|
ABC transporter type 1, transmembrane domain [IPR011527]
| 2.368932
| 6.349515
| 0.664026
| 0.330739
| 1.780369
| 2.139362
| 1.169468
| 0.279101
|
ABC transporter-like, ATP-binding domain [IPR003439]
| 2.769417
| 10.218447
| 0.389644
| 0.481969
| 2.0043
| 2.231907
| 0.948959
| 0.297107
|
ABC-transporter extension domain [IPR032781]
| 1.067961
| 1.851942
| -0.263119
| 0.579559
| 0.653774
| 0.355158
| 1.01815
| 0.330419
|
ABC-type uncharacterised transport system [IPR019196]
| 0.304348
| 1
| 1.020538
| 0.203866
| 0.460131
| 0
| 2.046706
| 0.275657
|
ABC1 atypical kinase-like domain [IPR004147]
| 0.320809
| 1.121387
| 0.953366
| 0.197954
| 0.466788
| 0.326577
| 1.805024
| 0.251551
|
ABT1/ESF2, RNA recognition motif [IPR034353]
| 0.415842
| 1
| 0.057404
| 0.241582
| 0.492866
| 0
| 2.000554
| 0.277383
|
ADAM, cysteine-rich domain [IPR006586]
| 0.518519
| 1
| -0.126652
| 0.223847
| 0.499657
| 0
| 1.91627
| 0.281927
|
ADAM10/ADAM17 catalytic domain [IPR034025]
| 0.230769
| 1
| 1.171615
| 0.151385
| 0.421325
| 0
| 2.087192
| 0.23961
|
ADAM17, membrane-proximal domain [IPR032029]
| 0.230769
| 1
| 1.171615
| 0.151385
| 0.421325
| 0
| 2.087192
| 0.23961
|
ADAMTS, cysteine-rich domain 2 [IPR041645]
| 0.571429
| 1
| -0.408246
| 0.151823
| 0.494872
| 0
| 1.984861
| 0.222699
|
ADAMTS/ADAMTS-like, Spacer 1 [IPR010294]
| 0.571429
| 1
| -0.408246
| 0.151823
| 0.494872
| 0
| 1.984861
| 0.222699
|
ADAMTS/ADAMTS-like, cysteine-rich domain 3 [IPR045371]
| 0.571429
| 1
| -0.408246
| 0.151823
| 0.494872
| 0
| 1.984861
| 0.222699
|
ADAR1, first double-stranded RNA binding domain [IPR044456]
| 0.684466
| 1
| -0.715141
| 0.31824
| 0.464728
| 0
| 1.548778
| 0.298535
|
ADAR1, third double-stranded RNA binding domain [IPR044457]
| 0.684466
| 1
| -0.715141
| 0.31824
| 0.464728
| 0
| 1.548778
| 0.298535
|
ADCK3-like domain [IPR034646]
| 0.320809
| 1.121387
| 0.953366
| 0.197954
| 0.466788
| 0.326577
| 1.805024
| 0.251551
|
ADD domain [IPR025766]
| 0.638743
| 1.036649
| -0.45697
| 0.232577
| 0.522145
| 0.187899
| 1.98474
| 0.269302
|
ADNP, zinc finger domain [IPR045762]
| 0.63835
| 1
| -0.599163
| 0.261548
| 0.480478
| 0
| 1.718241
| 0.272637
|
AF-9, ANC1 homology domain [IPR040930]
| 0.424242
| 1
| -0.057365
| 0.161014
| 0.494227
| 0
| 2.279664
| 0.259217
|
AF4/FMR2, C-terminal homology domain [IPR043640]
| 0.456522
| 1
| 0.342471
| 0.148118
| 0.498106
| 0
| 2.250091
| 0.21585
|
AGC-kinase, C-terminal [IPR000961]
| 2.98301
| 9.123786
| -0.297337
| 0.486015
| 1.872697
| 2.385579
| 1.020722
| 0.317304
|
AIMP2, lysyl-tRNA synthetase binding domain [IPR031889]
| 0.662621
| 1
| -0.635401
| 0.272994
| 0.472815
| 0
| 1.714148
| 0.277954
|
AIMP2, thioredoxin-like domain [IPR041503]
| 0.662621
| 1
| -0.635401
| 0.272994
| 0.472815
| 0
| 1.714148
| 0.277954
|
ALG11 mannosyltransferase, N-terminal [IPR031814]
| 0.322581
| 1
| 0.820011
| 0.158758
| 0.467464
| 0
| 2.084328
| 0.221476
|
ALIX V-shaped domain [IPR025304]
| 0.584951
| 1.325243
| 0.234191
| 0.433353
| 0.591252
| 0.468465
| 1.33698
| 0.318659
|
ALKBH8, RNA recognition motif [IPR034256]
| 0.142857
| 1
| 2.49535
| 0.16533
| 0.349927
| 0
| 1.517798
| 0.281014
|
AMMECR1 domain [IPR002733]
| 0.571429
| 1
| -0.302287
| 0.168751
| 0.494872
| 0
| 2.049203
| 0.204394
|
AMP-activated protein kinase, glycogen-binding domain [IPR032640]
| 0.344828
| 1
| 0.628785
| 0.261138
| 0.475312
| 0
| 1.699185
| 0.277384
|
AMP-binding enzyme, C-terminal domain [IPR025110]
| 1.711165
| 4.029126
| -0.103782
| 0.533593
| 1.296587
| 1.040037
| 0.911957
| 0.295987
|
AMP-dependent synthetase/ligase [IPR000873]
| 2.793689
| 6.757282
| -0.245205
| 0.555372
| 2.078241
| 1.271159
| 0.836907
| 0.299595
|
AMPK, C-terminal adenylate sensor domain [IPR032270]
| 0.410526
| 1.252632
| 0.765497
| 0.328687
| 0.564967
| 0.434521
| 1.536429
| 0.309643
|
AP complex, mu/sigma subunit [IPR022775]
| 2.599515
| 5.98301
| 0.029641
| 0.600553
| 1.783773
| 0.935909
| 0.757153
| 0.281203
|
AP-2 complex subunit mu, N-terminal [IPR043532]
| 0.562044
| 1
| -0.237981
| 0.336937
| 0.496136
| 0
| 1.553269
| 0.29118
|
AP-3 complex subunit beta 1, serine-rich domain [IPR029394]
| 0.599515
| 1
| -0.324454
| 0.31414
| 0.489997
| 0
| 1.678753
| 0.299068
|
AP-3 complex subunit beta, C-terminal domain [IPR029390]
| 0.599515
| 1
| -0.324454
| 0.31414
| 0.489997
| 0
| 1.678753
| 0.299068
|
AP-3 complex subunit delta domain, metazoa [IPR010474]
| 0.633495
| 1
| -0.552339
| 0.259464
| 0.48185
| 0
| 1.796761
| 0.279114
|
AP-4 complex subunit epsilon-1, C-terminal [IPR028269]
| 0.571429
| 1
| -1.073362
| 0.209102
| 0.494872
| 0
| 2.055632
| 0.308343
|
AP180 N-terminal homology (ANTH) domain [IPR011417]
| 1.019417
| 1.599515
| -0.683234
| 0.466012
| 0.611072
| 0.624966
| 1.191913
| 0.340772
|
APAF-1 helical domain [IPR041452]
| 0.48
| 1
| 0.293053
| 0.206305
| 0.4996
| 0
| 2.239975
| 0.274755
|
APBB1IP, PH domain [IPR039665]
| 0.714286
| 1
| -1.060378
| 0.182944
| 0.451754
| 0
| 2.128614
| 0.223081
|
APC10/DOC domain [IPR004939]
| 1.418605
| 2.686047
| -0.506696
| 0.477114
| 0.993761
| 1.224855
| 1.257669
| 0.339497
|
APPL1, BAR domain [IPR037929]
| 0.401163
| 1
| 0.368015
| 0.216395
| 0.490134
| 0
| 1.986598
| 0.267466
|
ARAP, RhoGAP domain [IPR037858]
| 0.692308
| 1
| -0.976815
| 0.23294
| 0.461538
| 0
| 2.017856
| 0.290991
|
ARF GTPase-activating protein GIT1, C-terminal [IPR022018]
| 0.5
| 1
| -0.085625
| 0.148193
| 0.5
| 0
| 2.224939
| 0.180309
|
End of preview.