tasks/multisample-variants/Dockerfile

FROM condaforge/mambaforge:24.9.2-0
WORKDIR /app
COPY run_script.sh /app/
COPY environment.yml /app/
RUN mamba init bash && . ~/.bashrc && mamba env create -f environment.yml && chmod +x /app/run_script.sh
SHELL ["/bin/bash", "--login", "-c"]
CMD ["/app/run_script.sh"]