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tasks/cnv-detection-wes/environment.yml
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name: cnv-detection-wes
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channels:
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- bioconda
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- conda-forge
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- defaults
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dependencies:
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- fastp
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- bwa-mem2
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- samtools
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- picard
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- mosdepth
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- cnvkit
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- control-freec
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- gatk4
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- bcftools
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- bedtools
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- python>=3.9
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- pandas
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- numpy
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- scipy
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