lingzhi227 commited on
Commit
c8b9f7e
·
verified ·
1 Parent(s): c886295

Upload tasks/clinical-wgs-interpretation/environment.yml with huggingface_hub

Browse files
tasks/clinical-wgs-interpretation/environment.yml ADDED
@@ -0,0 +1,18 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ name: clinical-wgs-interpretation
2
+ channels:
3
+ - bioconda
4
+ - conda-forge
5
+ dependencies:
6
+ - fastp
7
+ - bwa-mem2
8
+ - samtools
9
+ - picard
10
+ - gatk4
11
+ - delly
12
+ - mosdepth
13
+ - bcftools
14
+ - snpsift
15
+ - bedtools
16
+ - multiqc
17
+ - pandas
18
+ - python=3.11